##maf version=1 scoring=roast.v3.3 a score=1365.000000 s hg38.chr19_GL949748v2_alt 0 1 + 1064304 T s panTro4.chr19 58936492 1 + 63644993 T i panTro4.chr19 N 0 C 0 s rheMac3.chr19 59858196 1 + 64156825 T i rheMac3.chr19 N 0 C 0 s macFas5.chr19 54875173 1 + 59248254 T i macFas5.chr19 N 0 C 0 s papAnu2.chr19 46998026 1 + 51301725 T i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 46710962 1 + 50890351 T i chlSab2.chr6 N 0 C 0 a score=37821.000000 s hg38.chr19_GL949748v2_alt 1 15 + 1064304 GTCAGTTGCTTGGTG s panTro4.chr19 58936493 15 + 63644993 GTCAGTTGCTTGGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102564661 15 - 106955855 GTCAGTTGCTTGGTG i nomLeu3.chr10 N 0 C 0 s rheMac3.chr19 59858197 15 + 64156825 GTCAGTTGCTTGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875174 15 + 59248254 GTCAGTTGCTTGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998027 15 + 51301725 GTCAGTTGCTTGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46710963 15 + 50890351 GTCAGTTGCTTGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281161 15 + 49145316 GTCATTTGCTTGATG i calJac3.chr22 N 0 C 0 a score=207591.000000 s hg38.chr19_GL949748v2_alt 16 86 + 1064304 TGGTGAAGC--AATGAGAG--TGTTTTTTTCG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATTAGCATAAGAAATGTACTTCTT s panTro4.chr19 58936508 86 + 63644993 TGGTGAAGC--AATGAGAG--TGTTTTTTTGG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATTAGCATAAGAAATGTACTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798183 66 + 60714840 TGGTGAAGC--AATGAGAG--TGTTTTTTTGA-------GGAGAGGAGGTGTCAGATAGATCAAGAATT--------------------TACTTCTT i ponAbe2.chr19 N 0 C 0 s nomLeu3.chr10 102564676 86 - 106955855 TGGTGAAGC--AATGAGAG--TGTTTTTTTGC-------GGGCAGGAGGTGTCGGATAGATCAAGAATTTATAATAAGCATAAGAAATGTACTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858212 87 + 64156825 TGGTGAAGC--AATGAGAGG-TTTTTTTTCGG-------GGGGAGGAGGTGTcagatagatcaagaatttataataagcatcagaaatgtacttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875189 87 + 59248254 TGGTGAAGC--AATGAGAGG-TTTTTTTTGGG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998042 87 + 51301725 TGGTGAAGC--AATGAGAGG-ttttttttGCG-------GGGGAGGAGGTGTCAGATAGTTCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46710978 88 + 50890351 TGGTGAAGC--AATGAGAGGTTTTTTTTTGCG-------GGGGAGGAGGTGTCAGATAGTTCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281176 91 + 49145316 TGGTGAAGCCAAATGAGAG--TGATTTTTGGGGGGGGCTGGGGAGGAGGTGTCAGA----TCAGGAATTTAAAATAAACGTAAGAAATGTACTTCTT i calJac3.chr22 C 0 I 462 a score=5096.000000 s hg38.chr19_GL949748v2_alt 102 2 + 1064304 AA s panTro4.chr19 58936594 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798249 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102564762 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858299 2 + 64156825 aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875276 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998129 2 + 51301725 AA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46711066 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45281267 462 + 49145316 I a score=2656698.000000 s hg38.chr19_GL949748v2_alt 104 990 + 1064304 CAAAGccagcctgggcaacatagtgagattcccatctct--acaaaa--aaaaaaaaaaaaaaa-----------ttagcccagtgt-ggtggtgcacacctgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgtgtgac-agtgcaagaccctgtctcaaaaaataaaaagaaaaaaaaagaaaCATACTAAAA-----AAGGACACATATTAGCAATATGAAACAAGAACAATTTTCCATAAAGCAAGAGGCTTATGGAAATAAAAAGTATAAAAATACATGATGGTAAA---AAATATATAACATTATCCTCTAACAGAATAGGCAGTAGGGTgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtctcttt-aaaaaaaaaaaaaaaaAAGGC---------------AGAATTGATACAGCTGAAG--AAAAATGAACAAGTAAGAAAATGTGGTGGAGGAACTTCTCCAGGAAGCTGATATAATTATATTAAGATCAGAAAAAAT---AAGAGAAAAGTCATCGTACGAT---------ATAAGGGACAGGTGTTTCTCAAAATCCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccagattcaagtgattctcctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgaatttttagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctc--gtgattcgcccacctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccagcc s panTro4.chr19 58936596 986 + 63644993 CAAAGccagcctgggcaacatagtgagattcccatctct--acaaaa--aaaaaaaaaaaaaaa-------aaaattagcccagtgt-ggttgtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaagaaaaaaaaagaaaCATAcaaaaa-----aaggacacatattagcaatgtgaaacaagaacaattatccataaagcaagaggcttatggaaataaaaagtataaaaatacatgatggtaaa---aaatatataacattatcctctaacagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtctctt---------aaaaaaaaaaaggc---------------agaattgatacagctgaag--aaaaatgaacaagtaagaaaatgtggtggaggaacttctccaggaagctgatataattatattaacatcagaaaaaat---aagagaaaagccatcgtaagat---------ataagggacagCTGTTTCTCAAAATCCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgccccggctggagtgcagtggtgcgatctcagctcactgcaaactccacctcccagattcaagcgattctcctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgaatttttagtagagacggggtttccccatgttggtcaggctggtctcaaactcctgacctc--gtgattcgcccacctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798251 1006 + 60714840 AAAAGccagcctgggcaacatagtgagattcccatctct--actaaa--aaaaaaaaaaaagaaaaagaaaaaaattagcccagtgt-ggttgtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagcctgggaggtcacggctgcagtgagctgtgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-aaaaaaaagaaaCATACTAAAAAAGATAAGGACACATGTtaacaatgtgaagcaagaacaattatccataaagcaaggggcttatggaaataaaaagtataaaaatacatgatagtaaa---aaatatataacattatcctctaatacaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcaagaccagtctgggcaacatgatgagaccgtgtctcttt-aaaaaaaaaaaaaaaaaaggc------------agtagaattgatacagctgaagaaaaaaatgaacaagtgagaagatgtagtggaggaacttctccaggaagctgatcta-----attaatatcagaaaaaataagaagagaaaagccatcgtaagat---------gtaaggaacagCTGCTTCTCAAAATCCAAAATCTTCTCTACTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccaaattcaagcgattctcctgcctcagcctccccagtagct-ggattacaggggctcgccaccacacccagctaatttttgaatttttagtaagagatgggtttcaccatgttggtcagg-tggtctc-aactcctgacctc--gtgaatcacccacctcagcctcccaaagtgctgggattacaggactgagccactgcacccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102564764 997 - 106955855 AAAAGccagcctgggcaacatagtgagattcccatctct--accaaa--aaaaaaaaa-----------------ttagcccagcgt-ggtggtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagccagggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-aaaaaaaagaaaCatactaaaaaagataaggacacatgctagcaatgtgaagcaagaacaattatccataaagcaaggggcttctggaactaaaaagtataaaaatacacgatggttaa---aaatatataacattatcctctaacagaataggcagtagggtgggtgccatggctcacgcctataatcccagcagtttgagaggctgaggtgggatgatcacttcagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtgtcttt-aaaaaaaaaaaaaaaaaaggc---------------agaattgatacagctgaag--aaaaatgaacaagtaagaaaatgtggtggaggaacttctccaggaagctgatataattatattaacatcagaaaaaat---aagagaaaagccatcgtaagatatatataagataagagACAGCTGTTTCTCAAAAACCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccagattcaagcgattcttctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcaaattcctgacctg--gtgattcacccacctcagcctcccaaagtgctgggattacaggcctgagccaccacacccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858301 984 + 64156825 aaaagccagcctgggcaacatggcgagattcccatttct--accaaa-----------aaaaaa-----------ttagcccagcgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggttgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaacatactaaaaaagataaggacacatgttagcaatgtgaaacaa-aacaattatccataaagcaaggggcttatggaaataaaaagtataaaaa-atatgatggtaaa---atatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctcaggtgggacgatcccttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctcttt-aaaaaaaaaaaaaaaaaaggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgatataattatattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTGTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcacccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattctcctgcctcagcctcccaagtacctgggattataggcgctcgcaaccacacccaggtaatttttgaatttttagtacagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcttcccaatgtgctgagattactggcatgagccaccacgcctggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875278 985 + 59248254 AAAAGccagcctgggcaacatagcgagattcccatttct--accaaa-----------aaaaaa-----------ttagcccagcgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggttgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaaCatactaaaaaagataaggacacatgttagcaatgtgaaacaa-aacaattatccataaagcaagggtcttatggaaataaaaagtataaaaa-atatgatggtaaa---atatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggacgatcccttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctttaaaaaaaaaaaaaaaaaaaggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgatataattatattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTGTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcacccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattcccctgcctcagcctcccaagtacctgggattataggcgctcgcaaccacacccaggtaatttttgaatttttagtacagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcttcccaatgtgcttagattactggcatgagccaccacgcctggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998131 1000 + 51301725 Aatagccagcctgggcaacatagcgagattcccatctct--accaaa--aaaaaccccaaaaaa-----------ttagcccaccgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgaggctgggaggttaaggctgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaacatactaaaaaaGATAAGGACAC--GTTAGCAATGTGAAATAAGAACAATTATCCATAAAGCAAGGGgcttatggaaataaaaagtataaaaatatatgatggtaaa---aaatatataacagtaTCCTCTGATAGAATAGGCAGTAGggtgggtgccgtggctcacgcctgtaatcccagcactttgagtggctgaggtgggacgatcacttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctttaaaaaaaaaaaaaaaaaaagggggggga-----caGTAGAACTGATACagctgaag--aaaaatgaacaagtaaGAAGATGTGGTGGAGGAACTTCTCCAGGAAGctgataaaattatattaatatcagaaagaAT---AGGAGAAAAGCCATCGTAAGAT---------ATAAGGGACAGCTGTTTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAatcctgattttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattctcctgcctcagcctcccaagtacctgggattataggcactcacaaccacacccaggtaatttttgaatttttagtagagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcctcccaatgtgctgagattactggcatgagccaccacgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46711068 999 + 50890351 AAAAGccagcctgggcaacatagcgagattcccatctactaaccaaaaaaaaaaaaaaaaaaaa-----------agaacccaccgtgggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggctgcagtgagctatgattgcgccactgcactccagtctaggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaaCatactaaaaaagataaggacacatgttagcaatgtgaaataagaacaattatccataaagcaaggggcttatggaaataaaaagtataaaaatatatgatggtaaa---aaatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgaaaggctgaggtgggacgatcacttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctt--aaaaaaaaaaaaaaggggggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgataaaattctattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTTTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcaattctcctgcctcagcctcccaagtacctgggattataggcactcacaaccacacccaggtaatttttgaatttttagtagagacggggtttcaccatattgctcaggctggtctcaaactcctgacctt--gtgattcgcccaccttagcttcccaatgtgctgagattatcggcatgagccaccacgcctggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281729 943 + 49145316 cgagaccatcctggtcaacatggtgaaa-ccccgtctct--actaaa------aatacaaaaaa-----------ttagctgggcat-ggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggaggcagaggttgcggtgagccgagattgcgccattgcactccagcctgggtaacaagagtgaaactccgtctcaaaaaaaaaaaaa-----aaaagaaTGA-----------GTAAGAACACATGTTAGC----------------------------------------------------AGTATAAAAATATATGATGGTAAACATATATATATAACATTATCCTCTAATGGAATAGGCAGGAGGGTgagtgcggtggctcacacctgtaagcctagcactttgagaggctgaggtgggaggatcacttgagaccaggagttcaagaccagtctgggcaacatggtgagaccttgtctcttt-aaaaaaaaaaaaaaaaGAAGAAGAAGACTAGGCAGTAGAATTGATACAGCTGAAG--AAAATTGAGCAAGCGAGAAAAC---GTGGAGGTGCTTTTCCAGGAAGCTGATATGTTAATATCAGAAAAAGGAAGAATAAGAAGAGACAAGCCATGGTAAAAT---------AGAAGGGACAGCTGCTTCTCAAAATCCAAAATCTTCTCTG---AGGATATCCTGAttttctttttgttttttttttcttttgaggtggagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcaccgcaacctctgcctcccaggttcaagcgattctcctgcctcagtctcccgagtagctgggattacaggcatgcgccaccgtgcccagctaa-ttttgcatttttagtagaggcagggtttcaccatgttggtcaggct-gtcttgaactcccaacctcaggtgatctgcccacctcggcctcccaaaatgctgagattacaggcgtgagccaccatacccggcc i calJac3.chr22 I 462 I 316 a score=1488255.000000 s hg38.chr19_GL949748v2_alt 1094 572 + 1064304 GagaaccctgattttgttcaggtgtcagttggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttgtgaaagtgtggtccctgaaccagcagcgtcagcatcacctgggagctcgtcagaaaggcaaattcttgagccccacc----ccagacctactgaatcag--tcagaaactctgaaggtgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactgaagtttaaacaccTTTAGCCCAGTTAGGTAAACTCACGCCCACTGCTAGTGGTTATTTAAGGAAGGGGCTGGATGCAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTATGCCCTTCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACttttta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg s panTro4.chr19 58937582 574 + 63644993 GagaaccctgattttgttcaggtgtcaggtggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttgtgaaagtgtggtccctgaaccagcagcgtcagcatcacctgggagctcgtcagaaaggcaaattcttgagccccact----ccagacttactgaatcagagtcagaaactctgaaggcgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactgaagtttaaacaccTTTAGCCCAGTTAGGTAAACGCACGCCCACTGCTAGTGGTTATTTAAGGAAGGGGCTGGATGCAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTATGCCCTTCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttgta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55799257 574 + 60714840 GagaaccctgattttgttcaggtatcaagtggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttctgaaagtgtggtccctgaaccagcagcttcagcatcacctgggagctcgtcataaaggcaaattcttgagccccact----ccagacctactgaatcagagtcagaaactctgaaggtgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactaaagtttaaacactTTTAGCCCAGTTAGGTAAACTCATGCCCACTGCTAGTGCTTACTTAAGGAAGGGGCTGGATACAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCACGTTGGAAGGGCCTTTCTATGCCCTTTGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACttttta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgtagtggcgcgatctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102565761 557 - 106955855 Gagaaccctgattttgttcaggtgtcaagtggccacccttgttccttggagacttggcccttttctagtt-----------tcttgattactctaagGCTTAGTAACGTGCtgatttggaaaatgtggtccctgaaccagcagcctcagcctcacctgggagctcgtcagaaaggcaaattcttgagccccact----ccagacctactgaatcagagtcagaaactctgacagttagcttttcctttctcctcctctccaacctgtggttggacaagtcctccaggtgattctgatgcacactaaagtttaaacacTTTCAGCCCAGTTAGGTAACCTCACGCCCACTGCTAGTGGTTACTTAAGGAAGGGGCTGGATGCAAT--TGTTTCTTGAGATGTGAGTGGGAATCTCGTGAGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTACGCCCTTCGTCTGCTTTTTAGCTCATCCTTTCCAAAAAATTAACtt--------tttatttatttcagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59859285 566 + 64156825 GagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaagGCTTAGTGACGTGCtggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagctcatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaactctgaaggcgagcttttcctttttcctcctctccaacctatagtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacaccGTTAGCCCAGTTAGGTAACCTCACACCCAGTGCTAGTGATCACTTAAGGAAGGGGCTGGATGCAAGTGTGTTTCTTGAGATGTGAGTGGAAATCTCATGGGAGGCTTCCTCATGTTAGAAAGGGACGCCTTGGAAAGG-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgctgcccaggctagagtgcagtggcgcgatcttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876263 566 + 59248254 Gagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaaggcttagtgacgtgctggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagctcatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaactctgaaggcgagcttttcctttttcctcctctccaacctatagtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacaccgttagcccagttaggtaacctgacacccagtgctagtgatcatttaaggaaggggctggatgcaagtgtgtttcttgagatgtgagtggaaatctcatgggaggcttcCTCATGTTAGAAAGGGACGCCTTGGAAAGG-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgctgcccaggctagagtgcagtggcgcgatcttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999131 566 + 51301725 gagaaCCCTGATTTTGTTCAGGTGTCAACTGGCCACGCTTGTTCCTTGGAGACTTGGTCCTTTTCTAGTTTCAGGTATGAATCTTGATTAGTCTAAGGCTTAGTGATGTGCTGGTTCTGAAAGTGTGGTCCCTGAACCAGCAGCGTCAGCATTACCCGGGAGCTCATC----AGGCAAATTCTTGAGCCCCACCCACGCCAgccctactgaa------tcagaaactctgaaggcgagcttctcctttttcctcctctccacCCTATGGTTTGacaagtcctccaggtgattccgATGCACGCTAAAGTTTAAACACTGTTCGCCCAGTTCGGTAACCTCACACCCAGTGCTAGTGATCACTTAAGGAAGGGGCTGGATGCAAGCGTGTTTCTTGAGATGTGAGTGGAAATCTCATGGGAGGCTTCCTCATGTTAGAAAGGGACGCCTTGGAAAGA-----CCATGCCCGTCGTCTGCTTTTTATCTCATCCTTtccaaaaaattaactttttatgtctttatttttttgagatgaagtcttgtt-gtgttgcccaggctggagtgcaggggcgcgatcttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712067 566 + 50890351 Gagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaaggcttagtgacgtgctggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagcttatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaagtctgagggcgagcttttcctttttcctcctctccaccccatggtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacactgttcgcccagttaggtaacctcacacccagtgctagtgatcacttaaggaaggggctggatgcaaacgtgtttcttgagatgtgagtggaaatctcatgggaggcttcCTCATGTTAGAAAGGGACGCCTTGGAAAGA-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgttgcccaggctggattgcagtggcgcgatcttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45282988 468 + 49145316 GGgaaaccggattttgttcaggtgtcaagtggccacccttgttccttggagacttggcccctttctagtctcaggcatgaatcctgatgcgtctaagGCTTAGCGACATGCtgattcagagagtgtagcccctgagcaagcagcatcagcgtgacccgggagcttgtcagaacggcaaatccttgagcccctct----ccagacctatggaa------tcag--actctgcgggtgagcttttcctttttcctcctctccaagctgtggtttcacaagttctccaggcaattctgacgcaccctgaagtttaaACACT-CGAGCCCAGTTAGGTAACCCCACACTTACTGCTAGTGATGAC-TAAGGAAGGGGCTGGACGCAGCTGTGTTTCGGGAGATTTAAGTGGAAACCt-----------------------------------------------------------------ttttt-----------------------------------tttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgtgatcttg i calJac3.chr22 I 316 C 0 a score=206234.000000 s hg38.chr19_GL949748v2_alt 1666 87 + 1064304 gctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcacctgctactat s panTro4.chr19 58938156 87 + 63644993 gctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcacctgctactat i panTro4.chr19 C 0 I 314 s ponAbe2.chr19 55799831 87 + 60714840 gctcacggcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccaagtagctggggctacaggcacctgctactat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859851 87 + 64156825 gctcacttcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacgggcacctgctactat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876829 87 + 59248254 gctcactgcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacgggcacctgctactat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999697 87 + 51301725 gctcactgcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacaggcacctgctactat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712633 87 + 50890351 gctcactgccaccttcacctcctgggttccagcaattcttctgcctcaacctcccaagtagctgggactacaggcacctgctactat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45283456 87 + 49145316 gctcacagcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcaggcgccaccgt i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C a score=12894.000000 s hg38.chr19_GL949748v2_alt 1753 5 + 1064304 gccca s panTro4.chr19 58938557 5 + 63644993 gccca i panTro4.chr19 I 314 C 0 s ponAbe2.chr19 55799918 5 + 60714840 gccca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859938 5 + 64156825 gccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876916 5 + 59248254 gccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999784 5 + 51301725 gccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712720 5 + 50890351 gcccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45283543 5 + 49145316 gccca i calJac3.chr22 C 0 I 306 e nomLeu3.chr10 102566318 0 - 106955855 C a score=1009888.000000 s hg38.chr19_GL949748v2_alt 1758 450 + 1064304 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggcattacaggagcgagccacctcacctggcTTAACTTTTTATTTTAAAATAGTTCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgttcaagaccagcctgggcaacatggcaaaa--tcccatctctacaaaaaagtttttaaaaattagcatttgcctgtgcgtccagcttctcaggaagctgaggcgggaggatcacttgagcttaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCGTGAGACACCACTCCAGGTCTGGGttctct-----ttttttttttttt s panTro4.chr19 58938562 453 + 63644993 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggcattacaggagtgagccacctcacctggcTTAACTTTTTATTTTAAAATAGTCCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgtttaagaccagcctgggcaacatggcaaaaaatcccatctctacaaaaaattttttaaaaattagcatttgcctgtgtgtccagcttcttgggaagctgaggtgggaggatcacttgagcctaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCATGAGACACCACTCCAGGTCTGGGttctct----cttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55799923 455 + 60714840 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctgggattacaggaacgagccacctcacctggctTAACTTTTTATTTTAAAATAGTTCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgttcaagaccagcctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcatttgcctgtgcgtccagcttcttgggaagctgaggcgggaggatcacttgagcctaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCATGAGACACCACACCAGGTCTGGGTTCCCttttttttttttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859943 449 + 64156825 gctaa-tttttgtatttttagtagagacagggcttcaccatgttgcccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctggcattacaggagcaagctacctcacctggcTTAACTTTTTATTTTAAAACCATTCTGGAggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaatttttaaaaaattagcattcgcctgtacatccagctactttggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGTTCT-----TTTTTTTTTTTTT i rheMac3.chr19 C 0 I 569 s macFas5.chr19 54876921 444 + 59248254 gctaa-tttttgtatttttagtagagacagggcttcaccatgttgcccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattacaggagcaagctacctcacctggcTTAACTTTTTATTTTAAAACCATTCTGGAggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgcctgtacatccagctacttgggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGttct-----tttttttt----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999789 449 + 51301725 gctaa-tttttgtatttttagtagagacaggacttcaccatgttggccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattacaggagcaagcTACTTCACCTggcttaactttttattttaaaaccgttctggaggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgCCTGTacatccagctacttgggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagacaccatgctgggaatacaggcatgagacactacTCCAGGTCTgggggttct-----ctctctctctttt i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46712725 452 + 50890351 gctaa-tttttgtatttttagtagagacagggcttcaccatgttggccaggctggtctcaaaccactgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattataggagcaaaccacctcacctggcTTACCTTTTTATTTTAAAACAGTTCTGGAggccaggtgtggcggctcatgcctataatcccagctctctttgggagtctgaggcagaaggatcacttgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgcctatacatccagctacttgggaagctgaggtgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGTTCT-----CTCTTTTTtttgt i chlSab2.chr6 C 0 I 18 s calJac3.chr22 45283854 444 + 49145316 gctaattttttgtatctttagttgagatggggtttcaccatgttggccaggctggtcttgaactcctgacctc--gtgatctgcctgcctcggcctcccagcatgctgggattacaggagcaagccgcctcacctggccTGACATTTTATTTTAAAATCGTTCTGGAgaccaggtgtggcaactcatgcctgtaattccag--cactttgggagtctgaggcagaagggtcacttgagcccaggtgttaaagaccagcctgggcaatttggcaaaa--ccccatctctacaaaaagtttttaaaaaattagtgttcacctgtacttccagctacttgggaggctgaagaaggaggatcacttgagcccaggaggtcaaggctgtcgtgaaccACCATGCTGGGATTACAGGCATGAGGCATCACTTGAAGTCTTGGGttctc-----tttttttt----- i calJac3.chr22 I 306 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C a score=287241.000000 s hg38.chr19_GL949748v2_alt 2208 173 + 1064304 tttttttgagacagagtctcactctttcgcccaggctgcaatgaagtggcaccatcttggctcacagcaacctccaccccgcagattcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccgccaccaagcctggctaatttttatattttAGAGA s panTro4.chr19 58939015 173 + 63644993 tttttttgagacagagtctcactctttcgcccaggctgcaatgaagtggtgccatcttggctcacagcaacctgcaccccgcagattcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccaccaccaagcctggctaatttttatattttAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800378 172 + 60714840 tttttttgaaacagaatctcactctttcgcccaggctgcaatgaa-tggcaccatcttggctcacagcaacctccaccccgcaggttcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccgccaccaagcctggctaatttttatattttAGAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54877365 171 + 59248254 tttttttgagacag--tctccctctttcgcccaagctggagtgaagtggcgtgatctcggctcactgcaacctccgccccacagattcaagtgattctcctgcctcagcctcctgagcagctaggattataggcgcccgccaccaagcctggctaatttttatattttagaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47000242 171 + 51301725 tttttttgagacag--tctccctctttcgcccaagctggagtgaagtggcgtgatcttggctcactgcaacctccaccccccagattcaagtgattctcctgcctcagcctcctgagcagctaggattataggcgcccgccaccaagcctggctaatttttatattttagaga i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46713195 171 + 50890351 tttttttgagacag--tctccctcttttgcccaagctggagtgaagtggcgtaatctcggctcactgcaacctccgccccacagattcaagtgattctcctgcctcagcctcctgggcagctaggattataggcacccgccaccaagcctggctaatttttatattttagaga i chlSab2.chr6 I 18 I 405 s calJac3.chr22 45284298 173 + 49145316 tttttttgaaatggagtctcactcttttgccaaggtgggagtgaagtggcacaatcttggctcactgcaacctctgcccccgaggttcaaggaattctcctgcttcagcctcccaagcagctgggattataggcacccaccaccaagcctggctaatttttgtattttagaga i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C e rheMac3.chr19 59860392 569 + 64156825 I a score=180.000000 s hg38.chr19_GL949748v2_alt 2381 1 + 1064304 T s panTro4.chr19 58939188 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800550 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45284471 1 + 49145316 c i calJac3.chr22 C 0 I 2412 e nomLeu3.chr10 102566318 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000413 0 + 51301725 C e macFas5.chr19 54877536 0 + 59248254 C e rheMac3.chr19 59860392 569 + 64156825 I a score=15155.000000 s hg38.chr19_GL949748v2_alt 2382 31 + 1064304 gcccaggctggagtacagtggtgcgatctca s panTro4.chr19 58939189 31 + 63644993 gcccaggctggagtacagtggtgcgatctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800551 31 + 60714840 gcccaggctggagtacagtggtgcgatctca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54877536 18 + 59248254 -------------cgcggttttgccacgttg i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47000413 18 + 51301725 -------------cgcggttttgccatgttg i papAnu2.chr19 C 0 I 5 s calJac3.chr22 45286884 31 + 49145316 gtccagactggagtgcaatggtacaatctca i calJac3.chr22 I 2412 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e rheMac3.chr19 59860392 569 + 64156825 I a score=130378.000000 s hg38.chr19_GL949748v2_alt 2413 112 + 1064304 gctcaacacaacctccacctcccggattcaagtgattctcctgcctcagcctccccattagctgagattacaggcatgcaccaccacgcccggctaa--ttttgtatttttagt s panTro4.chr19 58939220 111 + 63644993 gctcaacacaacctccacctcccgggttcaagtgattctcctgcctcagcctccccgttagctgagattgcaggcatgcaccaccacgcccggcta---ttttgtatttttact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800582 112 + 60714840 gctcaacacaacctccacctcccgggttcaagtgattctcctacctcagcctccccattagctgagattacaggcatgtgccaccacgcccggctaa--ttttgtatttttagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566318 112 - 106955855 gctcaacataacctccacctcccaggttcaagcgattctcctgcctcagcctccccagtagctgagattacaggcatgcgccaccacacctggctca--ttttgtatttttagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877559 112 + 59248254 gctggcctcaaactcaaactcctgacctcaaatgatccgcccgcctctgcctctgaaagtgctgggattacaggcatgagccaccgtgcccCGACGG--TTCTGTTTTTGTAAT i macFas5.chr19 I 5 I 1 s papAnu2.chr19 47000436 112 + 51301725 gctggcctcaaactcaaactcctgacctcaagtgatctgcccgcctctgcctccaaaagtgctgggattacaggcgtgagccaccacgccccgacGG--TTCTGTTTTTGTAAT i papAnu2.chr19 I 5 I 978 s calJac3.chr22 45286915 113 + 49145316 gctcaccacaacc-ctgcctcctcgtttcaagcaattcgcctgcctcagcctcccaagtagctggggttacaggcgcccgccaccacgcttggctagattttgatatcgttagt i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e rheMac3.chr19 59860392 569 + 64156825 I a score=18620.000000 s hg38.chr19_GL949748v2_alt 2525 25 + 1064304 agag-acagg---gtttctctgtgttggt s panTro4.chr19 58939331 25 + 63644993 agag-acagg---gtttctctgtgttggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800694 25 + 60714840 agag-acagg---gtttctttatgttggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566430 25 - 106955855 agag-acggg---gtttctccaggttggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877672 29 + 59248254 AGCGCACAGGTTCATTTTTCTGTGTAAGT i macFas5.chr19 I 1 I 202 s calJac3.chr22 45287028 25 + 49145316 agaa-atggg---gtttcaccatgttgac i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=294344.000000 s hg38.chr19_GL949748v2_alt 2550 387 + 1064304 caggttggtctccaattcctgacctccggtgatctgcctgcctcggcctcccaaagtgctgggattacgggtgtgagccactgtgcccggcTGATCTTACATTTTCTTGTGCACTTATTCATGAGCTTTTTTTTTTTTT-ATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTCATACCCAGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTATAGATGCCAGCGAGGTCAGATCTCACAGTAAGGCCATTTCTGCATGACTTCAGGAGAAAATGCTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT s panTro4.chr19 58939356 388 + 63644993 caggttggtctccaattcccgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattatgggtgtgagccactgtgcccggcTGATCTTACATTTTCTTATGCACTTATTCATGAGCTTTTTTTTTTTTTTATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTCATATGCAGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTATAGATGCCAGCGAGGTCAGATCTCACAGTAGGGCCATTTCTGCATGACTTCAGGAGAAAATGCTGAAAACCTAATTTCCCCACACGCTTGGCCTCTTGTCCACCTGAAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800719 377 + 60714840 caggttggtctccaactcccgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattctgggcgtcagccactgcgcccggctGATCTTACATTTTCTCGTGCACTTATTCATGAGCTTTTTTTTTTTA--ATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTC---------ATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTTAAAGTCGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGAGTACAGATGCCAGCGAGGTCAGATCTCACAGTAGGGCCATTTCTACGTGACTTCAGGAGAAGATGCTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566455 387 - 106955855 caggttggtctccaactcccgaccgcaggtgatctgcctgcctcggcctcccaaagtgctgggattacgggcgtgagccactgcgcccggcTGATCTTACATTTTCTCGTGCACTTATTCATGAGCTTTTTTTTTTTTA-ATGAAAATGAATTACTACCATCCATTCTCCTTCCAAA-CTGCTCATACGCGGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTACAGATGCCAGCAAGGTCAGATCTCACAGTAGGGCCATTTCTGCATGACTTCAGGAGAAGATACTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45287053 360 + 49145316 taggctggtctcaaactcatgacctcaggtgatccacccaactcgacctcccaaagtgctgggattacaggcatgagctaccatgccAGCCTGAGCTT----------------------------TTTTTTTTTTTTA-ATGAAAACGAATTCCTACCATCCATTCTCCTTCCAAAGCTGCTCATACACAGTATTCCCGTGGTTTTTGCACATTTATTTAACAGAATGTCAAAGTAGACTCATTGCGATCTCAGTTTCTGCTCAGGCCCAGAGATTACAGTTTCCAACGAAGTAGGATCTCACAGTAGGACCATTTCTGCATGACTTCAGGGGAAGATGCTGAAAAGCTAATTTCCCCACACCCTTTGTCTCTTGTCTGTCCGAAGCT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=5955.000000 s hg38.chr19_GL949748v2_alt 2937 28 + 1064304 AAGAAAGGAGTGTtggggggaaggggga s panTro4.chr19 58939744 28 + 63644993 AAGAAAGGAGTGTtggggggagggggga i panTro4.chr19 C 0 C 0 s calJac3.chr22 45287413 28 + 49145316 AGGAAAGGAGTGTTGAGATTAGGGGAGA i calJac3.chr22 C 0 I 1294 e ponAbe2.chr19 55801096 0 + 60714840 C e nomLeu3.chr10 102566842 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=17229.000000 s hg38.chr19_GL949748v2_alt 2965 188 + 1064304 gggatagcattaggagatatacctaatgctaaatgacgagttagtgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaacttaaagtataataataataaaataaaataaaaataaataaataaataaaaattaaaaaaagaaaaaaaa s panTro4.chr19 58939772 188 + 63644993 gggatagcattaggagatatacctaatgctaaatgacgagttaatgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaagttaaagtataataataataaaataaAATaaaaataaataaataaataaaaattaaaaaaagaaaaaaaa i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 55801096 0 + 60714840 C e calJac3.chr22 45287441 1294 + 49145316 I e nomLeu3.chr10 102566842 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=814.000000 s hg38.chr19_GL949748v2_alt 3153 5 + 1064304 aagaa s panTro4.chr19 58939960 3 + 63644993 aa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801096 5 + 60714840 AAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566842 5 - 106955855 AAGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877903 5 + 59248254 AAGGT i macFas5.chr19 I 202 C 0 e calJac3.chr22 45287441 1294 + 49145316 I e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=34363.000000 s hg38.chr19_GL949748v2_alt 3158 33 + 1064304 aGGAGTGTTGAGATTAGAAGGTATTTTTTTTCC s panTro4.chr19 58939963 33 + 63644993 aGGAGTGTTGAGATTAGAAGGTATTTTTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801101 33 + 60714840 AGGAGTGTTGAGATTAGAAGAttttttttttcc i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 102566847 33 - 106955855 AGGAGTGTTGAGATTAGAAGATAttttttttcc i nomLeu3.chr10 C 0 I 6 s macFas5.chr19 54877908 31 + 59248254 AGGAGTGTTGCAATTAGAAGAtttttttttc-- i macFas5.chr19 C 0 I 7 s chlSab2.chr6 46713771 31 + 50890351 AGGAGTGTTGAAATTAGAAGAttttttttcc-- i chlSab2.chr6 I 405 I 6 e calJac3.chr22 45287441 1294 + 49145316 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=256941.000000 s hg38.chr19_GL949748v2_alt 3191 155 + 1064304 TAttgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgtagccatcacccaagcagtatacactgcaccccatttatagtcttttatccctcgcccccctctcacctttcccc-ccaagtccccaa s panTro4.chr19 58939996 156 + 63644993 TAttgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgtagccatcacccaagcagtatacactgcaccccatttatagtcttttatccctcgcccccctctcacctttccccaccaagtccccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801140 155 + 60714840 tattgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgcagccatcacccaagcagtatacactgcaccctattcatagtcttttatccctcgcccccctctcacctttcccc-ccaagtccccaa i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 102566886 155 - 106955855 tattgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagatcgaggtgcagccatcacccaagccgtatacactgcaccctattcaaagtcttttatccctcgcccccctctcacctttcccc-ccaagtgcccaa i nomLeu3.chr10 I 6 C 0 s rheMac3.chr19 59860961 147 + 64156825 tattgagatacaggtggtgtttggttgcatgagtaagtttttttg--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatccctcgccccccttccaccttttacc-ccaagtccccaa i rheMac3.chr19 I 569 C 0 s macFas5.chr19 54877946 147 + 59248254 tattgagatacacgtggtgtttggttgcatgagtaagttctttag--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatccctcgccccccttccaccttttacc-ccaagtccccaa i macFas5.chr19 I 7 C 0 s chlSab2.chr6 46713808 147 + 50890351 tatcgagatacaggtggtgtttggttgcatgagtaagttctttag--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatcccttgccccccttccaccttttacc-ccaagtccccaa i chlSab2.chr6 I 6 C 0 e calJac3.chr22 45287441 1294 + 49145316 I e papAnu2.chr19 47000548 978 + 51301725 I a score=236373.000000 s hg38.chr19_GL949748v2_alt 3346 104 + 1064304 agtccattgtatcattcttatgcctttgcatcctcatagtttagctcccacatatcagtgagaacatatgatgtttggttttccattcctgagtt-acttcactt s panTro4.chr19 58940152 104 + 63644993 agtccattgtatcattcttatgcctttgcatcctcagagtttagctcccacatgtcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801295 105 + 60714840 agaccattgtatcattcttatgcctttgcatcctcatagtttagctcccacatatcagtgagaacatatgatgtttggttttccactcctgagttaacgtcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102567041 104 - 106955855 agaccattgtatcattcttatgcctttgcatcttcatagtttagctcccacatatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59861108 104 + 64156825 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878093 104 + 59248254 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46713955 104 + 50890351 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacaatgtttggttttccattcctgagct-acttcactt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3856875 100 - 49145316 agcccattgtgtcattcttatgtctttgtgtcctcataacttagctctcacttatgagtgagaacat---atgcttggtttt-tgttcctgagtt-acttcactt i calJac3.chr22 n 1294 C 0 e papAnu2.chr19 47000548 978 + 51301725 I a score=120754.000000 s hg38.chr19_GL949748v2_alt 3450 43 + 1064304 agaataatagtctccaGAGATTAGAAGAGTttttgttttgttt----- s panTro4.chr19 58940256 41 + 63644993 agaataatagtctccaGAGATTAGAAG--TTTTTGTTTTGTTT----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801400 43 + 60714840 agaataatagtctccaGAGATTAGAAGAGTTTTTGTTTTGTTT----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102567145 43 - 106955855 agaataatagtctccaGAGATTAGAAGAGTTTTTGTTTTGTTT----- i nomLeu3.chr10 C 0 I 3415 s rheMac3.chr19 59861212 43 + 64156825 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878197 43 + 59248254 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001526 43 + 51301725 agaataatagtgtCCAGAGATtagaagagtttttgttttggtt----- i papAnu2.chr19 I 978 C 0 s chlSab2.chr6 46714059 43 + 50890351 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3856975 48 - 49145316 agaataatactttccaGAGATTAGAAGCGTTTTTGTTTGGTTCTGTTC i calJac3.chr22 C 0 C 0 a score=12075.000000 s hg38.chr19_GL949748v2_alt 3493 5 + 1064304 tgttt s panTro4.chr19 58940297 5 + 63644993 TATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801443 5 + 60714840 TGTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59861255 5 + 64156825 TGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878240 5 + 59248254 TGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001569 5 + 51301725 tgttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714102 5 + 50890351 TGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3857023 5 - 49145316 TGTTT i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102567188 3415 - 106955855 I a score=1110817.000000 s hg38.chr19_GL949748v2_alt 3498 366 + 1064304 ctgtgtgtttgtttACGTAAGCTGTTGGTGTGCTGTGAGTCCCATCCTCTGTCCACCGTAGATGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGTCCAGAGAGGAATGGGGTCtgatatggtttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattgaatcatggaggtggcttctaccttgttgttctcatgata--aagtgagttctcaggagatctgatggttttataagcgtttggcaagttcctcctttgcttgctcttctctctctcttgttgccttgtg s panTro4.chr19 58940302 366 + 63644993 CTGTGTGTTTGTTTACGTAAGCTGTTGGTGTGCTGTGACTCCCATCCTCTGTCCACCATAGATGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATGGGGTCTCatatggtttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattgaatcatggaggtggcttctaccttgttgttctcatgata--aagtgagttctcaggagatctgatggttttataagcatttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801448 368 + 60714840 CTGTGTGTTTGTTTACATAAGCTGTTGGTGTGTTGTGAGTCCCATCCTCTGTCCACCATAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATGGGGTCtgatatggtttggctttatgtccccacccaaatctcatcttgaatgataatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcttctgccttgttgttctcgtgatagcaagtgagttctcaggagatctgatggttttataagtgtttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102570603 368 - 106955855 CTGTGTGTTTGTTTACATAAGCTGTTGGTGTGCTGTGACTCCCATCCTCTGTCCACCATAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttctgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcacggaggtggcttctaccttgttgttctcgtgatagcaagtgagttctcaggagatctgatggttttataagtgtttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i nomLeu3.chr10 I 3415 C 0 s rheMac3.chr19 59861260 368 + 64156825 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGAAGGGTGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggctagctcctcctttgcttgctcttctctctctcctgttgccttgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878245 368 + 59248254 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggctagctcctcctttgcttgctcttctctctcttctgttgccttgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001574 368 + 51301725 ctgtgtgtttctttACCTAAGCTGTTGGTGTGCTGTGAGTCCCATCCTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTCCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATagggtctgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcatgatagcaggtgagttctcaggagatctgatggttttataagtgtttggcgAGCTCCTCCTTTGCTTGCTCTTCTCTCGCTCCTgttgccttgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714107 368 + 50890351 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAACAGGGTCtgatatggtttggctttgtgttcccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgttcaccatgctgttcttgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggcaagctcctcctttgcttgctcttctctcgctcctgttgccttgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3857028 350 - 49145316 CTGTGTG----TTTACACAAGCTGTTAGTGTGCTGTGGGTCCTGTTTTCCATCCACCATAGGTGGGTGAT---GGATGACAGTCTCTTCAACTGGACAGTTCAGAGTAGTTACATGGGGCGAGGGGCGGGCCCACAGAGGAACAGGGTCtgatatactttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttggggcaggagcctggtaggaggtgattggatcgtggaggaggcttccaccatgctcctctcatgatagca-----------aggagacctgatggttttataagtgtttggcaaggtcctcttttgcttgctcctctctctctcctgctgccttgta i calJac3.chr22 C 0 n 0 a score=115692.000000 s hg38.chr19_GL949748v2_alt 3864 37 + 1064304 aagaagatatttgcttctccttccccttctgccatga s panTro4.chr19 58940668 37 + 63644993 aagaagatatttgcttctccttccccttctgccatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801816 37 + 60714840 aagaagaaatttgcttctccttcgccttctgccatga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102570971 37 - 106955855 aagaagatatttgcttctccttccccttctgtcatga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59861628 37 + 64156825 aagaagatatttgcttctccttccccttctgccatga i rheMac3.chr19 C 0 I 1040 s macFas5.chr19 54878613 37 + 59248254 aagaagatatttgcttctccttccccttctgccatga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001942 37 + 51301725 aagaagatatttgcttctccttccccttctgccgtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714475 37 + 50890351 aagaagatatttgcttctccttccccttctgccatga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45288735 37 + 49145316 aaaaagatacttgcttctctttcctcttttgccatga i calJac3.chr22 I 1294 C 0 a score=858063.000000 s hg38.chr19_GL949748v2_alt 3901 450 + 1064304 ctgt-agtttcctgaggccaccctagccatgtggaattgtaagtcaattaaat-------ctctttct------ttt-----------------------------tttttt----------gagactgagccccc--ctgtcatccaggctggtgtgcagtggtgc-aatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcca----------------atagccggctaattttgtatttttagtagaggtggcg-ttcaccatgttgaccaggctagtctcgaactcctaacctcaagtgatccgcc--cacctcagcctcccaaagtgctaagattacaggtgt--gagccaccacacacggcctcggctatttatagcagtgtgagaacgggctaacacaGGGTCTTTCCTCACTGgagagag-agggtgggaggagagagag--agggtgggaggggagagaggggaga-----------g s panTro4.chr19 58940705 470 + 63644993 ctgt-agtttcctgaggccaccctagccatgcggaattgtaagtcaattaaat-------ctcttttt------ttt-----------------------------ttttttt-ttttttttgagactgagccccc--ctgtcatccaggctggtgtgcagtggtgc-aatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcca----------------atagctggctaattttgtatttttagtagaggtggcg-ttcaccatgttgaccaggctagtctcgaactcctaacctcaagtgatccgcc--cacctcagcctcccaaagtgctaagattacaggtgt--gagccaccgcacacggcctcggatatttatagcagtgtgagaacgggctaacacaGGGTCTTTCCTCATTGGAgagag-agggtgggaggagagagag--agggtgggaggggggagaggggagaaatgggggagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801853 461 + 60714840 ctgt-agtttcctgaggcctccccagtcacgcggaactgtaagccaattaaac-------ctcttttt------ttg-----------------------------tttgtttgtttgttttgagactgagcctca--ctgtcatcgaggctggggtgcagtggtgc-aatctcagctcgctgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgccc----------------ataccgggctaattttgtgtttttagtagtgatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtgaaccgcc--cacctcagcctcccaaagtgctcagattacaggtgt--gagccaccacacacggcctcgggtatttatagcagtgtgagaacggactaacacaGGGTCTTTCCCCATTGgagagag-agggtaggaggagagagag--agggtgggaagggagagaggggaga-----------g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571008 458 - 106955855 ttgt-agtttcctgaggccaccccagccatgcggaactgtgagtcaatgaaaccatgaaacttttttt------ttt-----------------------------ttttttttttttttttgaaaatgaacctcc--ctgtcatccaggctggagtgcagtggtgcaaatctcaactcactgcaacctttgcctcccaggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcta----------------ataccgggctaattttgtatttttagtagagatggcgtttcaccgtgttgaccaggctagtctcgaactcctgacctcaagtgatccgtccacacctcatcctcccaaagtgctaagattacaggcgc--gagccaccacacacagcctcgggtatttacagcagtgtgagaacagactaacacaGGGTCTCTACTCATTGGAGGGAG-AGGGTGGGAAgggaga---------------cggggagacggggag-----------a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54878650 457 + 59248254 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttt-------------------------------------------ttttgttttttgagactgagcctca--ctgtcatgcaggctggagtgcagtggtgc-aatctcagttcactgcaacctccacctcccgggttcaagcgattcttctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aagctaccacactcggcctcggatatttatagcagtgcgagaagggactaacacaGGGTCTTTCCTCATTGgagagagaagggagaaaggggagagagagagggtgggagggaagagaggagaga-----------g i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47001979 469 + 51301725 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttt------ttt------------------tgtt-------ttttgttttgttttttgagactgagcctca--ctgtcatgcaggctggattgcagtggtgc-aatctcagttcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aAGCTACCACACTCGGCCTGGGATATTTATAGCAGTGCCAGAAGGGACTAACACAGGGTCTTTCCTCAttggggagagaagggagagaggggagagagagagggtgggagggaagagaggggaga-----------g i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46714512 474 + 50890351 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttttttgttttt------------------tgtttt----gttttgttttgctttttgagactgagcctca--ctgtcatgcaagctggagtgcggtggtgc-aatctcagttcactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aagctaccacacttggcctcggatatttatagcagtgcgagaagggactaacacaGGGTCTTTCCTCATTGgagagag-agggtgggaggggagagag---gggagagaagggagagaggggaga-----------g i chlSab2.chr6 C 0 I 264 s calJac3.chr22 45288772 452 + 49145316 gtgtaagtttcctgagggctctccagccatgcggaactgtgaatgcattaaac-------ctctttcc------ttcataaattacccagtctcaggtttttgtgtgtttgtttggtttttcgagactgagtctcactctgtcacccaggctgcagtgcagtggcac-gatctcagcttgctgcaacctctgcctcccatgttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgtaccaccatgcagggctaaccatgccaggctaattttctatttttaatagtgagggagtttcaccatgttgaccaggctggtctcaaactcctaacctcaagtggtccgtc--tacctcggcctcccaga-tgctgggattacaggtgcgagagccaccacacacagtcttgggtatttatggcagcgtgagaatggactagtacaGG-------------GGAGAGAG----------------------------------------------------------- i calJac3.chr22 C 0 C 0 e rheMac3.chr19 59861665 1040 + 64156825 I a score=3479.000000 s hg38.chr19_GL949748v2_alt 4351 9 + 1064304 gggagaaat s panTro4.chr19 58941175 9 + 63644993 gggagaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802314 9 + 60714840 gggagaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571466 9 - 106955855 cggggagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54879109 7 + 59248254 gggagag-- i macFas5.chr19 I 2 I 5 s papAnu2.chr19 47002450 7 + 51301725 ggaagag-- i papAnu2.chr19 I 2 I 454 s calJac3.chr22 45289224 9 + 49145316 AGCAGACCT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=12335.000000 s hg38.chr19_GL949748v2_alt 4360 27 + 1064304 gggggag-ggggggagaggggggagaga s panTro4.chr19 58941184 28 + 63644993 gggggagcggggggagaggggggagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802323 28 + 60714840 gggggaaaggtgggagagcggggagaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571475 17 - 106955855 gggggag-----------agggaggtga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54879121 26 + 59248254 gggtggg-ag-ggaagagaggggagaga i macFas5.chr19 I 5 I 293 s papAnu2.chr19 47002911 27 + 51301725 gggagag-agagggagagaggggagagg i papAnu2.chr19 I 454 C 0 s calJac3.chr22 45289233 12 + 49145316 -------------GGGGTAGGGGAG--- i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=3747.000000 s hg38.chr19_GL949748v2_alt 4387 10 + 1064304 gaATGAATAT s panTro4.chr19 58941212 10 + 63644993 gAATGAATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802351 10 + 60714840 gAATGAATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571492 10 - 106955855 gaatgaatat i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47002938 5 + 51301725 ---tgacG-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45289245 5 + 49145316 -----AATAT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e macFas5.chr19 54879147 293 + 59248254 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=3600.000000 s hg38.chr19_GL949748v2_alt 4397 1 + 1064304 G s panTro4.chr19 58941222 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802361 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571502 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862705 1 + 64156825 G i rheMac3.chr19 I 1040 C 0 s macFas5.chr19 54879440 1 + 59248254 g i macFas5.chr19 I 293 C 0 s papAnu2.chr19 47002943 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715250 1 + 50890351 G i chlSab2.chr6 I 264 C 0 s calJac3.chr22 45289250 1 + 49145316 G i calJac3.chr22 C 0 C 0 a score=422431.000000 s hg38.chr19_GL949748v2_alt 4398 132 + 1064304 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatccccaaggattcagtaa--------------tgtgaccaagtggaggag--- s panTro4.chr19 58941223 132 + 63644993 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatccccaaggattcagtaa--------------tgtgaccgaggtgacgag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802362 133 + 60714840 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa-------------TTGTGACCAAGTGGAGGAG--- i ponAbe2.chr19 C 0 I 960 s nomLeu3.chr10 102571503 124 - 106955855 agaatgaATGTACCAGGAG----CGTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatctccgagga----------------------tgtgaccaagtggaggag--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862706 136 + 64156825 AGAATGAATGTACCAGGAGCTGTCTTTTCtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagccggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879441 136 + 59248254 agaATGAATGTACCAggagctgtcttttctcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47002944 136 + 51301725 AGAATGAATGTACTAGGAGCTGTCTTTTCTCCTTTGCAGGAGCGCCACCTGGAGGTAGGAGGTGAAGTCTGCAGAGAGAAGCTGGAAATGTACTGATGGATCCCCAAGGATTCAGTAA--------------TGTGACCAAGCAGAGGAG--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715251 136 + 50890351 AGAATGAATGTACCAggagctgtcttttctcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289251 132 + 49145316 GCAATGA----ACCAGGAGCTGTCTTTTATCCTTAGcaggagcgccacctggaggtaggaggtgaagtctgccgcgagaagctggaaatggactgacagatccccaagggttcagtaa--------------cgtgaccaaggagtggag--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19456713 143 - 122678785 AGAATGAATGAATCAGGT-----CTTTCTTGCTTTCCACCAGCGCCACCTGGAGGTGGAAGGTGAGCCCCGCAGAGAG--GCTGGAACTGTACAGATGGA-CCCCACAGACAGAGCAAGCCAACCTTCCAGCTGTG--CAGCTGGAGGAGGGA i canFam3.chr1 N 0 C 0 a score=506927.000000 s hg38.chr19_GL949748v2_alt 4530 194 + 1064304 ctgcattt-------------------acaggca------------tcaaggg-aactgcaggtgagaggtctgcagcCT------TGCAAGAGAGTGG--GGGAAGCAGGAGAAGCTCCACGTGG--GGAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCGAAAGGattttaatcactgagctgacactgtatttttttcttgtatgtgacttttt s panTro4.chr19 58941355 194 + 63644993 ctgcattt-------------------acaggca------------tcaaggg-aactgcaggtgagagatctgcagcCT------TGCAACAGAGTAG--GGGAAGCAGGAGAATCTCCACGTGG--GTAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCAAAAGGattttaatcactgagctgacactgtatttttttcttgtatgtgacttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571627 195 - 106955855 ctgcattt-------------------acaggca------------tcgagggaaactgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGCAGGAGAAGCTCCACGTGA--GGAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCAAAAGGattttaattactgagctgacactgtatttttttcttgtatgtgacttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862842 194 + 64156825 ctgcgttt-------------------acaggca------------tcagggg-aaccgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGGGGGAGAAGCTCCACATGT--GGAGATAAAGGAAAAGCTGACCACACTCCCTCCACGTTGCAGGCAACCTGCCAAAAGGATTTTAATTACTGAGCTGACACTATATTTTTTTCTTGTATGTGACTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879577 194 + 59248254 ctgcgttt-------------------acaggca------------tcagggg-aactgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGCGGGAGAAGCTCCACATGT--GGAGATAAAGGAAAAGCTGACCACGCTCCCTCCACGTTGCAGGCAACCTGCCATAAGGATTTTAATTACTGAGCTGACACTATATTTTTTTCTTGTATGTGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003080 194 + 51301725 CTGCGTTT-------------------ACAGGCA------------TCAGGGG-AACTGCAGGTGAGAGATCTGCAGCCT------TGCAAGAGAGTGG--GGGAAGCGGGAGAAGCTCCACATGG--GGAGATAAAGGAAAAGCTGACCACGCTCCCTCCACGTTGCAGGCAACCTGCCAAAAGGATTTTAATTACTGAGCTGACACTATACTTTTTTCTTGTATGTGACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715387 194 + 50890351 ctgcgttt-------------------acaggca------------tcagggg-aactgcaggtgagagatccgcagcct------tgcgagagagTGG--GGGAAGCGGGAGAAGCTCCACATGG--GGAGATAAAGGAAAAGCTGACCATGCTCCCTCCACCTTGCAGGCAACCTGCCAAAAAGATTTTAATTACTAAGCTGACACTGTATTTTTTTCTTGTATGTGACTTTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289383 200 + 49145316 ttgccttt-------------------gcaggca------------ccagagg-aactgcaggtgagacatctgcggcCTTATGAGTGTGAGAGGGTGG--GGGAAGCAGGAGGAGCTCCACGTGG--GGAGATAAAGAAAAAGCTGACCACGCTCCCTCTAAGTTGCAGGCAACCTGCCAAAAGCATTTTAATTACTGAGCTGACACTGTATTTTTTTCTTGTATGTAACttttt i calJac3.chr22 C 0 I 312 s canFam3.chr1 19456856 209 - 122678785 CTGCAGGTGAGAACTGTGGGGGAGGGGAGAGGGAGAAGGGTGGAGTCCAGGGG-GACTGCAGGTGAGAA--CTGTGGCCT-----------GGGGATGGCAGGGGAGGAGCAGAAGTTCCAAGTGGGAGGAAATAAAGAAAAAGCTGACCATGCTCACTGCA-GCTGCAGGCAACCTGCCAAAAGcatttcaattactgaac--------tatttttcccttgcatgtgact---- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55802495 960 + 60714840 I a score=85137.000000 s hg38.chr19_GL949748v2_alt 4724 32 + 1064304 taagaagcagctgg-aagtctttatgacctaag s panTro4.chr19 58941549 32 + 63644993 taagaagcagctgg-aagtctttatgacctaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571822 32 - 106955855 taagaagcagctgg-aagtctttatgacctaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863036 33 + 64156825 TAAGAAGCAGCTGGAAAGTCTTTATGACCTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879771 33 + 59248254 TAAGAAGCAGCTGGAAAGTCTTTATGACCTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003274 32 + 51301725 TAAGAAGCAGCTGG-AAGTCTTTATGACCTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715581 32 + 50890351 AAAGAAGCAGCTGG-AAGTCTTTATGACCTAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289895 32 + 49145316 TAAGAAGCAGCTGA-AAGTCTTTATGACCTAAG i calJac3.chr22 I 312 C 0 s canFam3.chr1 19457065 24 - 122678785 --------aattgg-acacctttattacctaag i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55802495 960 + 60714840 I a score=530979.000000 s hg38.chr19_GL949748v2_alt 4756 225 + 1064304 atgactataaaaattatgagaaggccgggcgcagtggctcacacctgtaatcctagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggtagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga s panTro4.chr19 58941581 225 + 63644993 atgactataaaaattatgagaaggccgggcgcagtggctcacgcctgtaatcctagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcaagaccagcctggccaacatggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggtagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571854 227 - 106955855 acgactataaaaattatgagaaggccgggcgcagtggctcacacctgtaatcctagcacttttgggaggccaaggtgggcggatcacttaaggtcaggattttcaagaccatcctgtctaactgggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggaagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863069 225 + 64156825 ATGACTATAAAAATTATGAGAAggccaggcgcagtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatgacaaaaccctgtctctgctaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879804 225 + 59248254 ATGACTATAAAAATTATGAGAAggccaggcgcagtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcaaaaccctgtctctgctaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003306 225 + 51301725 ATGACTATAAAAATTATGagaaagccaggcgcggtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcaaaaccctgtctctactaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715613 226 + 50890351 ATGACTATAAAAATTATAAGAAggccgggcgcggtggctcacgcctgtaatcctagcac-tttgggaggccaaggtgggcagatcacttaaggtcagga-gttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaataacaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289927 225 + 49145316 ATGACTATAAAAATTATGAGAAGTccaggcacgatggctgatgcctgtaaccccagcgc-tttgggaggccaaggtgtgtggatcatttgaggtcagga-gttcaagaccagcctggccaacgtggtaaatctccgtctctactaaaaac-acaaaacttagctgggcgtggtggctcatgcctataattccagatgctcgggagactgaggcaggagaattacttga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19457089 0 - 122678785 C e ponAbe2.chr19 55802495 960 + 60714840 I a score=53009.000000 s hg38.chr19_GL949748v2_alt 4981 28 + 1064304 acctgggaggcagaggttgcagtgaacc s panTro4.chr19 58941806 28 + 63644993 acctgggaggcagaggttgcagtgaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803455 28 + 60714840 acctgggaggcagaggttgcagtgaatc i ponAbe2.chr19 I 960 C 0 s nomLeu3.chr10 102572081 28 - 106955855 atctgggtggcagaggttgcagtgaacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863294 21 + 64156825 acctgggaagcag-------agtgagcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880029 21 + 59248254 acctgggaagcag-------agtgagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003531 20 + 51301725 acct-gcaagcag-------agtgagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715839 28 + 50890351 acctgggaggcagaggttgcagtgagcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290152 28 + 49145316 aaccaggaggcagaggttgcagtgagct i calJac3.chr22 C 0 C 0 e canFam3.chr1 19457089 0 - 122678785 C a score=1320460.000000 s hg38.chr19_GL949748v2_alt 5009 444 + 1064304 atgactgcaccatagcactccaggctgggcaacagagcaagactgtctc---------------------------------------aaaaaaaaaaaaagttatgagacttgctttacatgtcacccaagggcacaggtaaagaattagacctaggagttgggt-tgatagggcaatgggaa------aaaagaaaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGTAAC-AGTTGGTCATACTATCTACAACAACCCTATTCGAGATCTGTGTCT-T--CACGATGAGGAAAGGCACA s panTro4.chr19 58941834 444 + 63644993 atgattgcaccatagcactccagcctgggcaacagagcaagactgtctc---------------------------------------aaaaaaaaaaaaagttatgagacttgctttagatgtcacccaagggcacaggtaaagaattagacctaggagttgggt-tgatagggcaatgggaa------aaaagaaaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcatttcTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGTAAC-AGTTGGTCATGCTATCTACAACAACCCTATTCGAGATCTGTGTCT-T--CATGATGAGGAAAGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803483 454 + 60714840 atcattgcaccacagcactccagcctgggcaacggagcaagactgtctcaa------------------------------aaaaaaaaaaaaaaaaaaaaGTTATGAGACTTGCTTTAGATGTCACCCAAGGGCACAGGTAAAGAATTAGACCTAGGAGTTGGGTATGATAGGGCAATGGGGG------AAAAGAAAAAAATTGTTTACTG-AATCAAGGGAATAATCACACCTCCATCTTTACAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggtttgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACTGAAAGTCCCACATCCTAAG------ACACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGGAAC-AGTTGGTCATACTATCTACAACAACCCTATTCGAGATCTGTGTCT-C--CACGATGAGGAAAGG--TA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102572109 451 - 106955855 atgattgcaccacagcactccagcctgggcaacagagcaagactgtccc--------------------------------ccacaaaaaaaaaaaaaaaagttatgagacttgctttagatgtcacccaagggcacaggtaaagaattagacctaggagttgggtatgatagggcaatggggg------aaaag-aaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG------ACACATAAACACACGCCCCTGCACACACCAATCCTGGTAAAACGGGAAC-AGTTGGTCATACTATCTacaacaaccctattcgagatctgtgtct-c--cacgatgaggaaaggca-- i nomLeu3.chr10 C 0 I 822 s rheMac3.chr19 59863315 484 + 64156825 atgactgcaccactgcactgcagcctgggcgacagagcaagactgtctcgaaaaaaaacaaaaaacaaaaa-aaaaaaaaaaaaaGGAAAAGAAAAAAGAAAATTTGAGACTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggtttgcccaggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCTATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGGCATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880050 485 + 59248254 atgactgcaccactgcattgcagcctgggcgacagagcaagactgtctcaaaaaaaaaacaaaaacaaaaacagaaaaaaaaaAAGGAAAAGAAAAAAGAAAATTTGAGACTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggtttgcccaggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcatttcTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCTATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGGCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003551 471 + 51301725 atgactgcaccactgcactgcagcctgggcgacagagcaagactgtctcaa---------------------aaaaaaccaaaaaaaaaaagaaaaaaaaatttatgagacTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGcaatggggg------aaaagaaaaacattgtttaCTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTC--GTGCTTACAACTAG---GGCAACCAAATT-----GTTCTGGTTTGCCCAGGATTTTCTCTGGTTTAGCCCTGAAATGTCTGTGTCCTGGGAAATtcctcatttctattttaaaaccgAAAGTCCCACAtcctaagacacacacacacacacacacgccccagCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCTATTCGAGATCTGTGTCTCC--CACCATGAGGAAAGGCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715867 491 + 50890351 atgactgcaccactgcactgcagcctggacaacagagcaagactgtctcaaaaaaaaaaaaaaaagaaagaaagaaaagaaaagaaaagaaaaaaagaaaaTTTATGAGACTTGCTTTAGATGTTGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGATGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggttcgcccgggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcatttcTATTTTAAAACTGAAAGTCCCACATCCTAAG--acacatacacacacacacgcccctgcacacaccacTCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCTACAACAACCCTATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGGTATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290180 439 + 49145316 gtgattgcgccacagcactctagcctgggcaacagagcaagactatctt----------------------------------------aaaaaaaaaaaaaTTATGAGACTTGCTTTAGATGTTGCCCAAGGGCACAGGTAAAGAATTAGACCTGGGAGGTGGGTATGATAGGGTAATGGGGG------AAAAGAAAAAAACTGTTTACTG-AATCTATGGAATAATCACACCT-CATCTTTATAACTCATGTGCTTACAACCag---ggcaaccaaact-----gttccggtttgcccaggattttctctggtttagtcctgaaatttctgtgtcctgggaaatccctcaTTTCTATTTTAAAACTCAAAGTCCCACATCCTAAG--------ACAAACACACACGCCCCTGCACACACCAGTCCTGGTAAAACGGAAAC-AGTTGGTCATACTATCTACAGCAACCTTATTCGAGATC--TTTCT-C--CACCATGAGGAAGGGCA-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19457089 330 - 122678785 -----------------------------------------------------------------------------------------atgactatgaagggcatgaggcttgcgttagatgttccccaggggcacaggtaaagaaTGAGACCTGTGAGGCAAGTGTGGGAGGGTAAGGGGGGGGGTGCGGGAGGAAAA-------------AGCCATCGTACTTATCACCCCC----CCTTACAGCTCCTACGCTTACAATGAAGATGACAAACAAACTCACTCATTCCTGTTTGCCCAAGGCTTTCTCAATTTTAGC-----------------------------------------------------TCCCACATGGAGGG--------GCA---GCCCCCGCCTCAG----TCCCAGTCCTGGGAAAATGGGGATGGGGGGGTCCTACTGCTGGCAACAACCCCATCAGATATCTGTCTCT-CTTTATGGTGATGACA------ i canFam3.chr1 C 0 C 0 a score=268776.000000 s hg38.chr19_GL949748v2_alt 5453 88 + 1064304 TGCAGTTCTGGAGATTTTAACACGTGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAGCA----CTGAAAGCAGATGACTCTCCTCTTTC s panTro4.chr19 58942278 88 + 63644993 TGCAGTTCTGGAGATTTTAACACGTGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAGCA----CTGAAAGCAGGTGACTCTCCTCTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803937 88 + 60714840 TGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCACACCACCTGCCCTTGTATCCAACA----CTGAAAGCAGAGGACTCTCCTCTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573382 88 - 106955855 TGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAACA----CTGAAAGCAGATGACTCTCCTCTTTC i nomLeu3.chr10 I 822 C 0 s rheMac3.chr19 59863799 87 + 64156825 -GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATACCACCTGCCCTTGTATCCAAAA----CGGAAAGCAGACGACTCTCCTCTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880535 87 + 59248254 -GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATACCACCTGCCCTTATATCCAAAA----CGGAAAGCAGACGACTCTCCTCTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004022 87 + 51301725 -GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATATCACCTGCCCTTATATCTGACA----TGGAAAGCAGACGACTCTCCTCTTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716358 87 + 50890351 -GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATGCAACCTGCCCTTATATGCAACA----CGGAAAGCAGACGACTCTCCTCTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290619 88 + 49145316 TGCAGTTCTGCAGATTTTAACACATGTTCCCAAGG-TCACGCAACCTGGCTCTGTATCCAACG----CTGAAAGCAGACAACGCTCCtttttt i calJac3.chr22 C 0 I 294 s canFam3.chr1 19457419 87 - 122678785 CGGAGTCCTGGCAATTTTAAGAAATCTTCCTTAGGTTCACGTAACCTGGACGTATTTCCAGTGCCATCTGAAAACAAAGGACACCCC------ i canFam3.chr1 C 0 C 0 a score=198311.000000 s hg38.chr19_GL949748v2_alt 5541 65 + 1064304 CACGATTCTAAGCCTCTTCCCGTAGCATGTCCCATGTGGAGGAGAAAAGTTAAGAAAATGAAACT s panTro4.chr19 58942366 65 + 63644993 CACGATTCTAAGCCTCTTCCCGTAGCATGCCCCATGTGGAAGAGAAAAGTTAAGAAAATGAAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804025 65 + 60714840 CACGATTCTAAGCCTCTTTCCCCAGCATGTCCCATGTGGAAGAGAAAAGTTAAGAAAATGAAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573470 60 - 106955855 CGCGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTG-----GAAATGTTAAGAAAATGCAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863886 65 + 64156825 CACGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATGAAAGTTAAGAAAATGAAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880622 65 + 59248254 CACGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATGAAAGTTAAGAAAATGAAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004109 65 + 51301725 CACAATTctaagcctcttcccccagcaTGTCCCATGTGGAAGATgaaagttaagaaaatgaaact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716445 65 + 50890351 CACAATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATAAAAGTTAAGAAAATGAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45291001 65 + 49145316 CACAGTTCTAGGTTTCTTCCCCCAGCATTTCCTGTGTGGAAAAGAAaagttaagaaaatgaaact i calJac3.chr22 I 294 I 1315 s canFam3.chr1 19457506 50 - 122678785 ---------------CTTTCCACAGCTTGCCCCACATGGAAGACATAAGTTAGGAAAACAGCCAT i canFam3.chr1 C 0 C 0 a score=111311.000000 s hg38.chr19_GL949748v2_alt 5606 40 + 1064304 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA s panTro4.chr19 58942431 40 + 63644993 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804090 40 + 60714840 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573530 40 - 106955855 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863951 40 + 64156825 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880687 40 + 59248254 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004174 40 + 51301725 ggCCAAAACTTGCTACTGCGTTTGTGATTTTAGAAAGTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716510 40 + 50890351 GGCCAAAACTTGATGCTGCATTTGTGATTTTAGAAAGTAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19457556 39 - 122678785 GGGAGACCCTCACTACTGCATTTG-GAAATTAGAAAATAA i canFam3.chr1 C 0 I 38 e calJac3.chr22 45291066 1315 + 49145316 I a score=1242277.000000 s hg38.chr19_GL949748v2_alt 5646 556 + 1064304 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACTGAACAGATTGTTTACCTTAACAAGATCAAGTTAAACTCGTATAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGCGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATAGATCTGGCCG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCAACAGTTCTTAGCAGGAGAGACAGTG----------AGGAAAGCTGCAGGTTACTTGGAGACAGTCATCCCAAATGCATTAGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAATTAGAGGTACATCCCTGAGGTCTTT----------------AAAACAAA-ACAAACTCAgccaggcacggtggctcacacctgtaatcccagtgctttgggaagctgaggc s panTro4.chr19 58942471 554 + 63644993 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACGGAACGGATTGTTTACCTTAACAAGATCAAGTTAAACTTGTATAGGGCTTATATATAACGCCGCTTAAAAGCTCAAGTTTATGCGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATAGATCTGGCCG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCAACAGTTCTTAGCAGGAGAGACAGTG----------AGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTCGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGC--CAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATATAGTGTCAATTAGAGGTACATCCCTGAGGTCTTT----------------AAAACAAA-ACAAACTCAgccaggcacagtggctcacacctgtaatcccagcgctttgggaagctgaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804130 558 + 60714840 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTT---AAGATCAAGTTAAACTTGTATAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATGGATCTGGCGG-TGGAACTGGTAGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTG----------GGGAAAGCTGCAGGTTACTTGGAGACAGTCTTCCCAAATGCATTAGAGGAGCTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCTGGAAACCCTTCTTGTTCAGGACTGTTGTAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAGTTAGATGTACATCCCTGAAGTCTTTAAAAC-----------AAAACAAA-ACAAACTCagccaggtgcggtggctcacacctgtaatcccagagctttgggaggctgaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573570 572 - 106955855 ATGATCAGACATTATTAAAATTATCAGTGCAAAAAGAAAGTGAGACTGAACGGATTGTTTATCTTAACAAGATCAAGTTAAACTTGTACAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATGGATCTGACGG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTCAGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCGTAGTCAGAAAAAGTTACTGCAGCTTAAGGAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAATTAGACGTACATCCCTGAGGTCTTTAAAAC-----------AAAACAAA-ACAAACTCAgccaggcacagtggctcacacctgtaatcccagtgctttgggaggcctaggc i nomLeu3.chr10 C 0 I 136 s rheMac3.chr19 59863991 551 + 64156825 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAG-TGGAAGTAATGGATAC--------------------------------GGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGTTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATTAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAGGTCTTAAAAAACAAAAACAACAACAACAAAAAAAAACTCATccaggcacggtggctcacgcctgtaatcccggcgctttgggaggccgaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880727 551 + 59248254 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAG-TGGAAGTAATGGATAC--------------------------------GGCTACAGTTCTTAGCAGGAGAGGCAGTGAGGAGTTGTGAGGAAAGTTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCGTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATCAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAGGTCTTAaaaaacaaaaacaacaacaacaacaaaaaACTCATccaggcacggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004214 582 + 51301725 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACAGATTGTTTACCTTAACGTGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTAGGGATGTGGCAG-TGGAAGTGATGGATACAGTAACAGAAGGTTCTAAACACAACAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATGAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATTAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAggtcttaaacaacaacaacaacaacaacaac-aaaaactcatccaggcacggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716550 583 + 50890351 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAGGTTTATCGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAGTTGGAAGTGATGGATATGGTAACAGAAGGTTCTAAAAACAACAGAAAAGGGCTACGGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGCTGCAGGTTACTTGGAGACAGTAGTTCCAAATGCGTTAGAGGAACTGTAAAAATCTGCCACGGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAACTGCAGCTGTTGATTAATGTGATGTAATGTCAGTTAGATGTACATCCCTGAGGTCTTaaaaacaaaaaacaaaaaacaaaaa-aaaaCCTCATccaggcatggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=195419.000000 s hg38.chr19_GL949748v2_alt 6202 83 + 1064304 aggcagatcacctgaggctgggagattgagaccagcctggctaacatggtgaaaccccgtctctacgaaaaatacaaaaatta s panTro4.chr19 58943025 83 + 63644993 gggcagatcacctgaggctgggagattgagaccagcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaattg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804688 83 + 60714840 gagcagatcacctgaggctggaagttggagaccagcctggctaacatggtgaaatcctgatgctactaaaaatacaaaaatta i ponAbe2.chr19 C 0 I 132 s nomLeu3.chr10 102574278 83 - 106955855 gggcagatcacctgaggctgggagtttgagaccagcctggctaacatggtgaaaccccgtctctactaaaaatataaaaatta i nomLeu3.chr10 I 136 C 0 s rheMac3.chr19 59864542 83 + 64156825 gggcagatcacctgaggctgggagttggagaccagcctctctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881278 83 + 59248254 gggcagatcacctgaggctgggagttggagaccagcctcgctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004796 83 + 51301725 gggcagatcacctgaggctgggagttggagaccagcctcgctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717133 83 + 50890351 gggcagatcacctgaggccaggagttggagaccaacctggctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=301035.000000 s hg38.chr19_GL949748v2_alt 6285 171 + 1064304 gcccggcatggtggtgggcgcctgtaatccc----agctactcaggaggctaaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcgtgccactgcactccagcctgggtgacaagagtgaaactccgtctcaaaaaataaattaaataaataaat s panTro4.chr19 58943108 171 + 63644993 gccgggcgtggtggcaggcacctgtaatccc----agctactcaggaggctaaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccaagattgtgccactgcactccagcctggatgctaagagtgaaatgccgtctcaaaaaataaattaaataaataaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102574361 171 - 106955855 gctgggcgtggtggcaggcacctgtaatccc----agctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagtcaagatcgtgccactgcactccagcctgggtgacaagagtgaaactccgtctcaaaaaataaattaaatagataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59864625 175 + 64156825 gtcgggcgtggtggtgggcacctgaaatcccagccagctactcaggagactgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagacgagattgtgccactgcactctggcatggatgacaagagtgaaactccgtctcaaaaaataaattaaataaataaaG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881361 175 + 59248254 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggagactgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactctggcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaataaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004879 175 + 51301725 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactccggcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaataaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717216 171 + 50890351 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactccagcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaaT---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e ponAbe2.chr19 55804771 132 + 60714840 I e calJac3.chr22 45291066 1315 + 49145316 I a score=731941.000000 s hg38.chr19_GL949748v2_alt 6456 356 + 1064304 aattagctggacgtggtggcaggcacctgtaatcccagc-tacttgggaggctgaggcaggagaatcacttgagcctgggaggtggaggtt----------------------------------------------gcagtgaccagagatcgtgccactgaacgccagcctgggcaacagagcaagattctgtctca--aaaacaaaaacaaaaacaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTCAAAATAATGACTG---TTTTGTACCAACTATTGTGCTCATGTGATTGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTTCATAACAGAAAAAAAAATTAAATGTATAGCACTAGA s panTro4.chr19 58943279 353 + 63644993 aattagctggacgtggtggcaggcacctgtaatcccagc-tacttgggaggctgaggcaggagaatcacttgagcctgggaggtggaggtt----------------------------------------------gcagtgaccagagatcgtgccactgaacgccagcctgggcaacagagcaagattctgtctca-------aaaaacaaaaacaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTGCTCATGTGATTGATTGAACGATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTTCATAACAGAAAAAAAAATTAAATGTATAGCACTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804903 353 + 60714840 aattagtcaggcctggtggcgggcacctgtaatcccagc-tactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtt----------------------------------------------tcggtgagccgagatcatgccactgaactccagcctgggcaac--agcaagactctgtctcaaaaaaacaaaaacaaaagc-aaaaaaGGCTTAAGTTTATGAATGAACTGTTCATATTAGGTAATGGTCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTACTCATG----TGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGCAAAAAAAATTAAATATATAGCACTAGA i ponAbe2.chr19 I 132 C 0 s nomLeu3.chr10 102574532 346 - 106955855 aattagctggacgtggtggcaggcacctgtagtcccagc-tactcaggaggctgaggcaggagaatcacttgagcctgggaggcggaggtt----------------------------------------------gcagtgacctgagatcgtgccaccgaacaccagcctgggcaacagagcaagattctgtctca-------aaaaaaaaaaac--aaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTGAAAATAATGACTG-TTTTTTGTATCAACTATTGTGCTCATGTGATTGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGAAAAAG-----AAATGTATAGCACTAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59864800 358 + 64156825 ATttagccggccatggtggcaggcacctgtaatcccagc-tacccgggaagctgaagcaggagaatcacttgagc----------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------cagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaCGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCGTTTTTTTGTACCAACTATTGTGCTCACGTGATTGGTTGAACGGTGCTTCCAAAGAATTTGAAACAATAAGTCAAAGAAACCTAATGTCCATAACAGAAAAAAACAATAGATGTATAGCACTAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881536 358 + 59248254 aTttagccggccatggtggcaggcacctgtaatcccagc-tacccgggaagctgaagcaggagaatcacttgagcccaggaggcggaggtt----------------------------------------------gaagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaCGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCGTTTTTTTGTACCAACTATTGTGCTCACGTGATTGGTTGAACGGTGCTTCCAAAGAATTTGAAACAATAAGTCAAAGAAACCTAATGTCCATAACAGAAAAAAACAATAGATGTATAGCACTAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005054 358 + 51301725 atttagccggccgtggtggcaggcacctgtaatcccagcttacttgggaagctgaagcaggagaatcacttgagcccaggaggtggaggtt----------------------------------------------gcagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaaggctCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCG-TTTTTTGTACCAACTATTGTGCTCACGTGATTGGATGAACGGTGCTTCCAAAGAATTTGAAACAGTAAGTCAAAGAAACCTAATGTccataacagaaaaaaacaatagatgtatagcactaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717387 357 + 50890351 ATttagccaggcgtggtggcaggcacctgtaatcccagc-tacttgggaagctgaagcaggagaatcacttgagcccaggaggcggaggtt----------------------------------------------gcagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTGCTCACGTGATTGGATGAACAATGCTTCGAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGAAGAAAACAATAGATGTATAGCATTAGA i chlSab2.chr6 C 0 I 27 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=-7609.000000 s hg38.chr19_GL949748v2_alt 6812 9 + 1064304 AAAATTGA--------t-- s panTro4.chr19 58943632 10 + 63644993 AAAATTGA-------tt-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805256 17 + 60714840 AAAATTGAttttttttt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102574878 12 - 106955855 AAAATTCA-----tttt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865158 8 + 64156825 --AA---------tttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881894 17 + 59248254 --AAttttttttttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005412 7 + 51301725 --a----------tttttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e chlSab2.chr6 46717744 27 + 50890351 I a score=730544.000000 s hg38.chr19_GL949748v2_alt 6821 308 + 1064304 ttttttttttttgagacagggtctcactctgtcacccaggctggagtgc----agtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccatgctcagctaatttttgtatttttagtatagacagggttttaccattttccccaggctggtctcgaactcctatgctcaagcaatcaacttgcctcagcctcccaaagtgctgggattacaggcatgaacc----acagagcctggcATGATACTAGAAAAA s panTro4.chr19 58943642 308 + 63644993 ttttttttttttgagacagggtctcgctctgtcacccaggctggagtgc----agtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccatgctcagctaatttttgtatttttagtatagacagggttttaccattttccccaggctggtctcgaactcctatgctcaagcaatcaacctgtctcagcctcccaaagtgctgggtttacaggcatgaacc----acagagcctggcATGATACTAGAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805273 306 + 60714840 ttttttttttttgagacagggtctca--ctgtcacccaggctggagtgc----agtggtgcaatgctggctgactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccacacccagctaatttttgtatttttagtagaaacagggttttgccattttccccaggctggtctcaaactcctatgctcaagcaatccacctgcctcagcctcccaaagtgctgggattacaggcatgaacc----actgagcctggcATGGTACTAGaaaaa i ponAbe2.chr19 C 0 I 304 s nomLeu3.chr10 102574890 312 - 106955855 ttttttttttttgagacagggtctcactctgtcacccaggctggagtgc----agtggtgcaatgatgactcactgcagcctccacctcctgggctccagcgatcttcctgcctcagcctctagagtagcctggactacaagcatgcaccaccatatccagctaatttttgtattttcagtagagacagggttttgccattttccccaggctgttctcgaactcctatgctcaagcaatccacctgcctcagcctcccaaagtgctggggttacaggcatgaaccaGTGAGTGAGCCTGGCATGGTACTAGAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865166 310 + 64156825 tttttttttttggagacagggtcttactctgtcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccaccccctgggctccagcgatcctcctgcctcagcctctagagtagcacagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccattttccccaggctggtctcgaactcctaggctcaagcactctacctgcctcagtcccccaaagtgctgggattacaggcatgaacc----actgcgcctggTGTGGTACTAGAAA-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881911 310 + 59248254 tttttttttttggagacagggtcttactctgtcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccattttccccaggctggtctcgaactcctaggctcaagcaatctacctgcctcagtctcccaaagtgctgggattacaggcatgaacc----actgcgcctggTGTGGTACTAGAAA-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005419 312 + 51301725 ttttttttttttgagacagggtcttactctatcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacaaggttttgccattttccccaggctggtctcgaactcctaggctcaagcaatctacctgcctcagtctcccaaagtgctgggattacaggcgtgaacc----actgcgcctggtgtGGTACtagaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717771 312 + 50890351 ttgttgttgttggagacagggtcttactctgtcacccaggctggagtgcagcaagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccatttcccccacgctggtctcgaactcctaggctcaagcaatctacctgcctcagtctctcaaagtgctgggattacaggcgtgaacc----actgcgcctggTATGGTACTAGAAAAA i chlSab2.chr6 I 27 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=388837.000000 s hg38.chr19_GL949748v2_alt 7129 192 + 1064304 T------TCtttttttttttttgacatttaagttcaggggtacatgggcaggatgtgcaggtttgttacacgggtaaacgtgtgtcatgggggtttgttgtacagatta---------ttttttttctagtgtatttactacttcctgattatcagattattttatcacccagttattaagcctagtacccactagttatttttcct s panTro4.chr19 58943950 191 + 63644993 T------TC-ttttttttttttgacatttaagttcaggggtacatgggcaggatgtgcaggtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagatta---------ttttttttctagtgtatttactacttcctgattatcagattattttatcacccagttattaagcctagtacccactagttatttttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805883 198 + 60714840 t------tttttttttttttttaacttttaagttcaggggtacatggtcaggacgtgcaggtctgttacatgggtaaacgtgtgtcatgggggtttgttgtacAGATTATTTC---CTTTTTTTTTCTAGTGTAGTTACTACTTCCtgatatacagattattttatcacccaggtattaagcctagtacccactagttattttttgt i ponAbe2.chr19 I 304 C 0 s nomLeu3.chr10 102575202 151 - 106955855 ----------------TTCTTT--------------------------------------gtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagattatttc-ttcTTTTTGTTTCTAGTGTATTTACTACTTCCtgatatacagatt-ttttatcacccaggtattaagcccagtacccactagttatttttcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865476 196 + 64156825 --------Ttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagattatttc---ttttttttttctagtgtagttactacttcctgttgtacagattattttatcgcccaggtattaagcctagtacccactagttatttttcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54882221 197 + 59248254 -------Tttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaatgtgtgtcatgggggtttgttgtacagattatttc---TTTTTTTTTTCTAGTGTAGTTACTACTTCCtgatatacagattattttatcgcccaggtattaagcctagtacccactagttatttttcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005731 207 + 51301725 tcctttttttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcagatttgttacacaggtaaacgtgtgtcatgggggtttgttgtatagattatttctttttttttttttctagtgtagTTACTACTTCCtgatatacagattattttatcacccaggtattaagcctagtacccactagttatttttttt i papAnu2.chr19 C 0 I 683 s chlSab2.chr6 46718083 200 + 50890351 TTCTT--Tttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaac--gtgtcatgggggtttgttgtacagattatttc---ttttttttttctagtgtagttactacttcctgatacacagattattttatcgcccaggtattaagcctagtactcactggttatttttcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=4011.000000 s hg38.chr19_GL949748v2_alt 7321 2 + 1064304 ga s panTro4.chr19 58944141 2 + 63644993 ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806081 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575353 2 - 106955855 ga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865672 2 + 64156825 ga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54882418 2 + 59248254 ga i macFas5.chr19 C 0 M 20327 s chlSab2.chr6 46718283 2 + 50890351 ga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I a score=176162.000000 s hg38.chr19_GL949748v2_alt 7323 154 + 1064304 tcctctctctgctaccaccctccaccctctgacaggccccagcatgtgtGAAAAATTCTTATAGTCTTCTAGAAAATACAATAGGTAGCCTTTGGAACATAGGGTATCATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAA----ttttttttttt s panTro4.chr19 58944143 158 + 63644993 tcctctctctcctaccaccctccaccctctgacaggccccagcgtgtgtGAAAAACTCTTATAGTCTTCTAGAAAATACAATAGGTAGCCTTTGGAACATAGGGTATCATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAAttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806083 141 + 60714840 tcctgtctctccta-------ccaccctctgacaggccccagtgtgtgtGAAAAATTCTTGTAGTCTTCTAGAAAATACCATAGGCAGCCTTTGGAACACAGGGTATTATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAA----------TTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575355 144 - 106955855 tcctgtctctcctactaccctccaccctctgacgggccccagtgtgtgtGAAAAATTCTTACAGTCTTCTAGAAAATACAATAGTTAGCCTTTGGAACGTAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA--------------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865674 154 + 64156825 ccctctctctcctaccaccctccaccctctgacaggccccagtgtgtgtGAAAAATTTTTACAGTCTTCTAGAAAGTAAAATAGGTAGCCTTTGGAACATAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA----TTTTTTTTTTT i rheMac3.chr19 C 0 I 333 s chlSab2.chr6 46718285 154 + 50890351 tcctctctctcctaccaccctccaccctctgacaggccccagtgtgtgtGAAAAATTCTTATAGTCTTCTAGAAAGTAAACTAGGTAACTTTTGGAACATAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA----ttttttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=2730.000000 s hg38.chr19_GL949748v2_alt 7477 3 + 1064304 ttt s panTro4.chr19 58944301 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806224 3 + 60714840 TTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575499 3 - 106955855 TTT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46718439 3 + 50890351 ttt i chlSab2.chr6 C 0 I 443 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59865828 333 + 64156825 I a score=7656.000000 s hg38.chr19_GL949748v2_alt 7480 15 + 1064304 tttttttACAAATGA s panTro4.chr19 58944304 15 + 63644993 tttttttACAAATGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806227 15 + 60714840 TTTTTTTACAAATGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575502 15 - 106955855 TTTTATTACAAATGA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e chlSab2.chr6 46718442 443 + 50890351 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59865828 333 + 64156825 I a score=236370.000000 s hg38.chr19_GL949748v2_alt 7495 143 + 1064304 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaatgccccccactggggggcttatgggacagaaatggattttct-caccgttctgcaggctggaaatccaagatggaggtgcc s panTro4.chr19 58944319 143 + 63644993 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaatgccccccactggggggcttataggacagaaatggattttct-caccgttctgcaggctggaaatccaagatggaggtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806242 143 + 60714840 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaataccccccactgggggacttatgatatagaaatggattttct-caccgttctgcaggctggaaatccaagacggaggtgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575517 145 - 106955855 TCACTATAATGTTTTAAATATGTTTACCACCTACAGtttgtgtgctagggaagccataacaaattaccccccactggggtgcttatggtaccgaaatggattttctccatagttctgcaggctggaaattcaagatggaagtgcc i nomLeu3.chr10 C 0 I 2352 s rheMac3.chr19 59866161 143 + 64156825 TCACTATTACGTTTAAAATATGTTTACCACCtgcag-tagtgtgctagggaagccataacaaaataccccccacggggaggcttatggtacaaaaatggattttct-cacagttctgcaggctggaaatccaagatggaggtgcc i rheMac3.chr19 I 333 C 0 s papAnu2.chr19 47006621 143 + 51301725 tcactattatgtttaaaatatgtttaccaCCTGCAG-TAGTGTGCTAGGgaagccataacaaaataccccCCACgggggggCTTATGGTACAAAAAtggattttct-cacagttctgcaggctggaaatccaagatgGAGGTGCC i papAnu2.chr19 I 683 C 0 s chlSab2.chr6 46718885 134 + 50890351 TCACTATTGTGTTTAAAATATGTTTACCATCtgcag-tagtgtgctagggaagcc--------ataccccctactggggggcttatggtacaaaaatggattttct--acagttctgcaggctggaaatccaaaatagaggtgcc i chlSab2.chr6 I 443 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1390201.000000 s hg38.chr19_GL949748v2_alt 7638 1126 + 1064304 agtagggtcagtttctcccggggtctctctgctttgtatgcagatggccgccttcttgctgtgtctccacgtggtctttcctctggatgtACATATCCTGGTGTCCt-----tttcttttttttttttttgagttggagtcttactctgttgccca-gctggagtgcaatgacacgatctcagctcactgcagcctctgcctcctggattcaagcgattcccctgcctcagcctatcgagtagctgggattacaggcgtgcaccaccgcgcccagctaatttttgtatttttagtagacatggggtttggccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgggcttcccaaagtgctgaaattacaggcgtgagcca-ccacacGTAGCccctagtgtcttttttatgtccaaatttccttttttcacaacggcctcttgtctctaaatacagtcacattctgagttactgggagttaggattcagcacacgaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCATCAGACTGATGATCTGTGCTTTCTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTTATTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCGGTGCTTTCCACAGATTCATATGTTAGATCttttcta-------------tttttttttctgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagcagggactacaggcgtgtgccactattcccagctaatttttgtatttttagtagaggcagggtttcaccatattggccaggatggtctcgatctcttgaccccatgatcctcccactttgacctcccaaagtgttgggattacaggtgtgagctaccgcgcctggccACATATTAAATCttttttttttttttttttttt s panTro4.chr19 58944462 1138 + 63644993 agtagggtcagtttctcctggggtctctgtgctttgtatgcagatggccgccttcttgctgtgtctccatgtggtctttcctctggatgtACATATCCTGGTGTCCt-----tttc-tttttttttttctgagttggagtcttactctgttgccca-gctggagtgcaatgacacgatctcagctcactgcagcctctgcctcctggattcaagcgattcccctgcctcagcctatcgagtagctgggattacaggcgtgcaccaccgcgcccagctaatttttgtatttttagtagacatggggtttggccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgggcttcccaaagtgctgaaattacaggcgtgagcca-ccgcacGTAGCccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacggtcacattctgagttactgggagttaggattcagcacacgaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCGTCAGACTGATGATCTGTGCTTTTTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTTATTTACAAAGCCACCTCCACATGTGTTGAGCCTTTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCGGTGCTTTCCACAGATTCATATGTTAGATCTtttctattttttttttttttttttttttttgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaaacaattctcctgcctcagcctcctgagtagcagggactacaggcgtgtgccactattcccagctaatttttgtatttttggtagaggcagggtttcaccatattggccaggatggtctcgatctcctgaccccatgatcctcccactttgacctctcaaagtgttgggattacaggtgtgagctactgcgcccggccACATATTAAATCttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806385 1124 + 60714840 agtagggtcagtttctcctggggtctctctgctttgtatgcagatgggcgccttcttgctgtgtctccacatggtctttcctctggatgtacatatcctagtgtctt-----tttt-tttttttttttttgatatggagtcttactctgttaccca-gctggagtgcaatggcacgatctcagctcactgcagcctctgcctcctggattcaagcgattctcctgcctcagcctatcgagtagctgggattacaggcatgcaccactgcgcccggctaa-ttttgtatttttagtagagatggagtttgtccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgagcttcccaaagtgctgagattataggtgtaagcca-ctgcacGTAGCccctagtgtcttttttatgtccaaatttccttttctcataagggcctcttgtctccaaatacagtcatactctgagttactgagagttaggattcagcacacaaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCGTCAGACTCATGATCTGTGCTTTCTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGT------TGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCATTTACAAAGCCACCTCCACATGTGTTGAGCTTCTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTTCCACAGATTCACATGTTAGGTCttttctt-----tctttttttttttttttttgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagcagggactacaggtgtgtgccaccatgcccggctaatttttgtatttttagtagaggcagggtttcaccatattggccaggatggtcttgatctcttgacctcatgatcctcccacttcgacctcccaaagtgttgggattacaggtgtgagctactgcgcctggccACATATTAAATC--ttttttttttttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59866304 1124 + 64156825 agtagggtcagtttctcctgaggcctctctgctttgtatgcagatggccgccttcttgctgtgtctccacatggtctttcctctggatgtacacaacctagtgtgtc--ttttttt-tttttttttttttgagatggaatcttgctctgttgcccaggctagagtacaatggcatgatctcacctcactgcagcctccgcctcctgagttcaagcgattctcctgcctcagcctctcgagtagccaggattacaggctcaccccagcacgccctgttcatttttgtatttttagtagagatggggcttgggcatgttggccaggctggtctcgaattcctgacctcaggagatccgcccacctgggcttctcaaagtgctgagatcacaggcgtgagcca-ccgcacgtagcccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacagtcacattctgagttactgggtgttaggattcagcacacgaatttt---gagatgtaattcagcccataaTTAAGCTCTATCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGATTTATATATTCCTTTTCGATAGCAAAGAACTCAGGTTCTCCATGG-CCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTGAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTCCCACAGATTCACATGTTAGATCttttcta----------------ttttttttgagatggagttttgctctgtcgcccaggctggagtgcaatggcatgatcttggctggctgcaacctccgcctcctgggttcaagcgattctcctacctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcccgcttcaacctcccgaagtgttgggattacaggtgtgagccaccgcgcccggccACATGTTAAATCtttttcttttttctttttttt i rheMac3.chr19 C 0 I 2658 s papAnu2.chr19 47006764 1127 + 51301725 AGTAGGGTCAGTTTCTCCTGAGCCCTCTCTGCTTTGTATGCAgctggccaccttcttgctgtgtctccacGTGGTCTTTCCTCTGGATGTACACATCctagtgtctcttttttttt-tttttttttttttgagatggaatcttgctccgttgcccaggctggagtgcaatggcatgatctcagctcactgcagcctctgcctcctgagttcaagcgattctcctgcctcagcctcttaagtagccaggattacaggtgcacaccaccacgcccagttaatttttgtatttttagtagagatggggcttggccatgttggccaggctggtctcgaattcctgaccttaggagatccgcccacctgggcttctcaaagtgctgagatcacaggcgtgagcca-ccgcacgtagCCCCTAGTGTCTTTTTtatgtccaaatttccttttttcacaaGGGCCtcttgtctccaaatacagtcacattctgagttaCTGGGCGTTAGGATTTAGCACACGAATTTT---GAGATGTAATTCAGCCCATAATTAAGCTCTATCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGatttatatattcctttttgATGGCAAAGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTCCCACAGATTCACATGTtagatcttttcta----------------ttttttttgagatggagttttgctctgtcgctcaggctggagtgcaatggcatgatcttggctcgctgcaacctccgcctcctgggttcaagcgattctcctgcctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcctgcttcaacctcccaaagtgttgggattacaggtgtgagccaccgcacgcagccacatgttaaatctttttttttttttttttcttt i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46719019 1122 + 50890351 agtagggtcagtttctcctgagccctctctgctttgtatgcagatggccgccttcttgctgtgtctccacgtggtctttcctctggatgtacacatcctagtgtctc------tct-cttttttttttttgagatggaatcttgctccgttgcccaggctggagtgcaatggcatgatctcagctcactgcagcctccgcctcctgagttcaagcgattctcctgcctcagcctctcgagtagccaggattacaggcgcacaccaccacgcccggttgatttttgtatttttagtagagatggggcttggccatgttggccaggctggtctcgaattcctgacctcaggtgatccgcccacctgggcttctcaaagtgctgagattacaggcgtgagccacccgcacatagcccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacagtcacattctgagttactgggcgttaggattcagcacatgaatttt---gagatgtaattcagcccataaTTAAGCTCTGTCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGATTTATATATTCCTTTTTGATAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTCTGCTTCCCACAGATTCACATGTTAGAtcttttcta----------------ttttttctgagatggagttttgctctgtcgcccaggctggagtgcaatggcatgatcttggctcgctgcaacctccgcctcctgggttcaagcgattctcctacctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcccgcttcaacctcctgaagtgttgggattacaggtgtgagccaccgcacccggccACATGTTAAATCttttttttttttttttttttt i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=177693.000000 s hg38.chr19_GL949748v2_alt 8764 219 + 1064304 gagacagagtcttgctctgtcacccaggctggagtgcaatgatggatctcggctcactgcaagctccgcctcccaggttcatgccattttcctgcctcagcctcccgagtagctgagactacaggcacccgccaccacacctggctaattttttgtatttatagtagagata-----------tgttagcca-ggatggtctcgatctcctgacctcatgatccacccacc s panTro4.chr19 58945600 219 + 63644993 gagacagagtcttgctctgtcacccaggctggggtgcaatgagggatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactacaggcacccgccatcacgcctggctaattttttgtatttatagtagagata-----------tgttagcca-ggatggtctcaatctcctgacctcatgatccacccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55807509 220 + 60714840 gagacggagtcttgctgtgtcacccgggctagagtgcaatgagggatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactacaggcacccgccaccacacccggctaattttttgtatttgtagtagagaca-----------tgttagccagggatggtgtcaatctcctgacctcgtgatccacccgcc i ponAbe2.chr19 C 0 I 5201 s papAnu2.chr19 47007897 230 + 51301725 gagacagagtctccctctgtcaccctaactggagtgcaatgagggatctgggctcactgcaagctccgcctcccaggttcacgccattctcctggctcagcctcctgagtagctgggactacaggcgcccgccaccacgtccggctaattttttgtatttgtagtagagacagggtttcaccgtgttagcca-ggatggtctcgatcccttgacctcatgatccacctgcc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 46720145 230 + 50890351 gagacggagtctcgctctgtcaccctaactggagtgcaatgaggaatctgggctcactgcaagctccacctcccaggttcacgccattctcccggctcagcctcctaagtagctgggactacaggcgcctgccaccacgtctggctaattttttgtatttgtagtagagacagggtttcaccgtgttagcca-ggacggtcttgatcccctgacctcgtgatccacctgcc i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=12021.000000 s hg38.chr19_GL949748v2_alt 8983 16 + 1064304 tcggcctcccaaagtg s panTro4.chr19 58945819 16 + 63644993 tcggcctcccaaagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55812930 16 + 60714840 tcggcctcccaaagtg i ponAbe2.chr19 I 5201 C 0 s papAnu2.chr19 47008127 15 + 51301725 ttggtct-ccaaagTG i papAnu2.chr19 C 0 I 1767 s chlSab2.chr6 46720375 16 + 50890351 ttggcctcccaaagtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=135279.000000 s hg38.chr19_GL949748v2_alt 8999 265 + 1064304 ctgggattacaggcgtgagccaccgcgcccggccTCATGTTAAATCTTGACACCCAATGTGATCTGAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccatgacgccacctgccccagggaggcccagcccgggctatacacgctatggagccgcagggagccctgccccttccgagttggggcgggagctcccagggtgatgctacagctgtccaaaccccagctgtggatccgagcctccct s panTro4.chr19 58945835 265 + 63644993 ctgggattacaggcatgagccaccatgcccggccACATGTTAAATCTTGACACCCAATATGATCATAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccgtgacgccacctgccccagggagtcccagcccgggctatacacgctatggagccgcagggagtcctgccccttccgagttggggtgggagctcccagggtgatgctacagctgtccaaaccccagctgtggatctgagcctccct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55812946 265 + 60714840 ctgggattacaggcatgagccaccacgcctggccACATGTTAAATCTTGACACCCAATGTGATCGTAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccatgatgccacctgccacacggaggcccagcccgggctatacacgctatggagccgcagggagccctgccccttccgagttggggcgggagctcctagggtgatgctacagttgtccaaaccccagctgtggatccgagcctccct i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46720391 265 + 50890351 ctgggatgacaggaatgagccaccgcgcccggccacatgttaaatcttaacatccaatgtgatcgtagaggttgggcctttggtgatggcagcagccactccagatggcttgccgctgccatgacgccaactgccacagggaggcccagctgggactatacactcaatggagccgcagggagtcctgccccttctgagttggggcgggaggtcccagggtgctgcttcagctgtgcaaaccccagctgtggatccgagcctccct i chlSab2.chr6 C 0 I 1632 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e papAnu2.chr19 47008142 1767 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=1515.000000 s hg38.chr19_GL949748v2_alt 9264 8 + 1064304 CAGATCGT s panTro4.chr19 58946100 8 + 63644993 CAAATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813211 8 + 60714840 CGGATCAT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e chlSab2.chr6 46720656 1632 + 50890351 I e papAnu2.chr19 47008142 1767 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=456334.000000 s hg38.chr19_GL949748v2_alt 9272 355 + 1064304 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatatttgaagagatttattctgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccaaggtggtcggggggcagcttggttttatacattttagggaggcgtgaggcatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattggttgagtttgtctaaagacctgggattaatagagaggaaatattcaggtt s panTro4.chr19 58946108 355 + 63644993 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatatttgaagagatttattttgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccaaggtggtcggggggcagcttggttttatacattttagggaggtgtgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattgattgagtttgtctaaagacctgggattaatagagaggaaatattcaggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813219 355 + 60714840 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatattagaagagatttattctgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccgaggtggtcggggggcagcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattggttgagtttgtctaaagacctgggattaacagagagggaatattcaggtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59870086 370 + 64156825 ATCACATATCAAGACTTACTCTtgtcgacaagaagaatcaaactctataaaatatttgaagagatttattctgagccaaatatgataatgaaccaaatatgagtgaccatgggccatgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaagcctggacaatttgaaggaggcaggggcctccaggctttaggtaaattaaaacattgtctggttgacaattggttgagtttgtctaaagacctgggattaatagacaggaaatattcaaggt i rheMac3.chr19 I 2658 C 0 s papAnu2.chr19 47009909 355 + 51301725 atcacatATCAAGACTTACTCTTGTCGACAGGAAGAATCAAACTCtataaaacatttgaagagatttattctgagccaaatatgataA---------------TGACCGtggcccgtgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaagccTGGACAATTTGAAGGAGGCAGGGGCTTCCAGGCTTTAGGTAAATTAAAACATtgtctggttgacaattggttgagtttgtctaaagacctgggattaaTAGACAGGAAATATTCAAGGT i papAnu2.chr19 I 1767 C 0 s chlSab2.chr6 46722288 351 + 50890351 ATCACATATCAAGACTTACTCTtgtcgacaagaagaatcaaattctataaaatattggaagagatttattctgagccaaatatgataa---------------tgaccgtggcccatgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgaaac----atcaaacacttttgagaaatacattggtttggtccggaaagcctggacaatttgaaggagacgggggcttccaggctttaggtaaattaaaacattgtctgattgacaattggttgagtttgtctaaagacctgggattagtagacaggaaatattcaaggt i chlSab2.chr6 I 1632 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=457507.000000 s hg38.chr19_GL949748v2_alt 9627 260 + 1064304 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaagttgctagattctcagttaacctcctcaggattgggagg--tcctggaggaaaaagatctagcaatgttaacagagatcctttacatatgcaaatattcccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt s panTro4.chr19 58946463 261 + 63644993 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgagaaatgtttcctactcagaccttcaaaagctgctagattctcagttaacctcctcaggattgggaggtttcctggaggaaaaagatctagcaatgttaacagagatcctttacatatgcaaatatt-ccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813574 260 + 60714840 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaaggtgctagattctcagttaacctcctcaggattgggagg--tcctggaggaaaaagatctacctatgttaacagagatcctgtacatatgcaaatattcccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578014 261 - 106955855 aaaaaaaaagactgtggaaaccaaggttctttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaaggtgctagattctcggttaatctcctcaggattgggggg--tcctggaggaaaaagatctagctatgttaacagagatcttttacatatgcaaatattcccccccaccaaggacagttttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i nomLeu3.chr10 I 2352 C 0 s rheMac3.chr19 59870456 260 + 64156825 aagataaaagactgtggagaccaaggttc-tgttgaagtcttgtagcggctgcccttagagacaatagatgacaaatgtttcctactcagaccttccaaaggtgctagattctcagttaatctcctcaggattgggagg--tcctggaggaaaaagatctagctaggttaacagagatcctttacatatgcaaatgttctccccaacaaaggacagctttgtagggtcatttaaaaatatggcaaagaaacatggtttggggt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010264 260 + 51301725 AAGATAAAAGactgtggagaccaaggttc-tgtTGAAGTCTTATAgcggctgcccttagagacaatagatgacaacTGTTTCCTACTCAGACCTTCCAAAGGTGCTAGATTCTCAGTTAATCTCCTCAGGATTGGGAGG--TCCTGGAGGAAAAAGATCTAGCTAGGTTAACAGAGATCCTTTACATATGCAAATGTTCCCCCCAACAAAGGACAGCTTTGTagggtcatttaaaaatatggcaaagaaacatggtttggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46722639 259 + 50890351 aagataaaagactgtggagaccaaggttc-tgttgaagtcttatagcggctgcccttagagataatagatggcagatgtttcctactcaggccttccaaaggtgctagattctcagttactctcctcaggattgggagg--tcctggaggaaaaagat-gagcgaggttaacagagatcctttacgtatgcaaatgttccccccaacaaaggacagctttgtagggtcatttaaaaatatggcaaagaaacatggtttggggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=413592.000000 s hg38.chr19_GL949748v2_alt 9887 188 + 1064304 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagtaagtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagaccccagaccccttagataagaatctgggcaagat---------aaaaaaaaaaaatcagagctgagtcctca s panTro4.chr19 58946724 194 + 63644993 aaaatatttttattttcttctttgttaggt--aacgttatgccagagtcagattggaaagtaagtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagcccccagaccccttagataagaatctgggcaagatt---aaaaaaaaaaaaaaaaatcagagctgagtcatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813834 190 + 60714840 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagtaagtcatga----tatatagggctaaataaaacccatctgatgagaatttatagtttgtagggcatgagtccccagaccccttagataagaatctgggcaagat-------aaaaaaaaaaaaaatcagagctgagtcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578275 195 - 106955855 aaaatatttttattttcttctttgttaggtaaaatgttatgccggagtcagactggaaagtaagtcacga----tatatagggctaaatacgacacatctgatgagaatttgtggtttgtagggcatgagtccccagaccccttagataagaatctgggcaagat----gaaacaaaaaaaaaaaatcagagatgagttctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59870716 197 + 64156825 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagcacgtcgcga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagtccccagaccccttagagaagaatctgggcgagattaaaaaaaaaaaaaaaaaaaatcagagctgagtcctca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010524 192 + 51301725 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagcaCATCGCGA----TATATAGGGCTAAATAAaccccatctgatgagaatttatggtttgtagggcatgagtCCCCAGACCCCTTAGAGAAGAATCTGGgcgagatt-----aaaaaaaaaaaaaaatcagagctgagTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46722898 195 + 50890351 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattgtaaagtacgtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagtccccagaccccttagagaagaatctgggcaagatt--taaaaaaaaaaaaaaaatacagagctgagtcctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45292381 189 + 49145316 aaaatgtttttcttttcttctttgttatgt--cacgttatgtcagagtcaggttggaaagtaagtcacgatatttatttaggatcaaataaaacccatctgatgagaatttgtgctttgtggggcctgactccccagaccctttagatgggaatttgggcaagat------------aaaaacaaatcagagcttagttctca i calJac3.chr22 I 1315 C 0 e canFam3.chr1 19457595 38 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1201027.000000 s hg38.chr19_GL949748v2_alt 10075 478 + 1064304 CTATGGTAATTCAGTGAGTGTGACTACCAGCATAGATGTCCATAAAGGATATCCATTAGGGCCACCCATTTTAATAATGTTTGCCAGGACCCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CAAGAAGGATTGGGCAAGAAAACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTAAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCC-ACCTTGCTACTCCCTATGTGGCCTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGAGGGGGAGC s panTro4.chr19 58946918 477 + 63644993 CTATGGTAATTCAGTGAGTGTGACTACCAGCATGGATGTCCATAAAGGATATCCATTAGGGCCACCCATTTTAATAATGTTTGCCAGGACCCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CCAGAAGGATTGGGCAAGAAAATTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTAAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCC-ACCTTGCTACTCCCCATGTGGCCTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814024 478 + 60714840 CTATGGTAATTCAGTGAGTGTGACTACCAGCATAGATGTCCATAAAGGCTATCCATTAGGGTCACCCATTTTAATAATGTTTGCCAGGACTCTTCAATCAAACCAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CCAGAAGGATTGGGCAAGAAAACTGCATGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCCTACCTTGCTACTCCCGGTGTGGCTTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578470 478 - 106955855 CTATGGTAATTCAATGAGTGTGACTACCAGCATAGATGTCCATAAAGAATATCCATTAGGGTCACCCATTTTAATAATGTTCACCAGGACTCTTCAATCAAAACAACATCCACTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTCTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CAAGAAGGATTGGGCAAGAAAACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCTAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACGCAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGCGGCTTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59870913 497 + 64156825 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGATGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGGACTTTTTGGTTTTCTG-----TTTTGTT---TTT----------------------------------------------------------------TTT--------TTTTTTT---------GGTT--CAAGAATGATTGAGCAAGAACACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCCTTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGTGAGACAGATGGTCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTATGGCAAGAAAACAGAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCCACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010716 500 + 51301725 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGGTGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGgactttttggttttctgtttttttttttt---ttt----------------------------------------------------------------ttt--------ttttttt---------ggtt--caagaaTGATTGAGCAAGAACACTGCAGGGAGTGA-GGGAATGCTGAACTTTGGAAGCAATTAgaaccaagaaaacaaaagctgaaagccttGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGTCACCAAGAACTCCCaagctttaaaaagaatgacTCTCTGTGGCAAGAAAACAGAGAG--ACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCCACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723093 487 + 50890351 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGATGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGGACTTTTTGGT-----------TTTTGGT---TTT----------------------------------------------------------------TTT--------TGGGGGG---------GGTT--CAAGAATGATTGAGCGAGAACACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCCCTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGTGAGACAGATGGTCACCAAGAACTCCCAAGCTTTAAAAAGAATGA----CTGTGGCAAGAAAACAGAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCTACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45292570 553 + 49145316 CTGTGGTAATTAAA--AGTCAGACTCCCAGCAGAGATGTCCATAAGGGACCTCCATTAGGGTCATCAGTTTTTA---TGTTTGCCAGGACTCTTCGATCAAAACAAAATCCATTCTCAGCATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTTTTT---TTTGGTTCA----AGAATGATTGAGCAGGAAAGCTGCAGGGAGCAGAGGGATGCTGCAAAGGAGGACTTT---CTGGGTTTTTTT---------GGTT--CAAGAATGATTGAGCAGGAAAGCTGCAGGGAGCAG-AGGGATGCTGAGCTTTGGAAGCAATTAAACCCGAGAAAACAAAAGCTGAGAGCACCGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTCTGTGTTTCTGCATCAAGACTGGCTTCCTTCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACAGAGAGACACTCCTCCCGCACCTTGCTACTCCCCATGTGGCTCCCACAC---CTCAACTTGGGGCTGTGTAGTGTGAGGGGA-GGGGAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19457633 516 - 122678785 CTGTAGTGATTT----AGGGTGAATACTGGAGTGGATGTCCATAAATGATATCTGTTAGGGCCGTTGATTTTAACAAGATTTGTCCAGACTCTGC--TCAACACAAAATCTTTTCTTAGACAAGCTCTGACTTAAA--AAACTTTTTTGGG-----------TGTCatttaatttaatttaatttaatttaatttaatttaa-------------------------------------tttaatttaatttTTTTTTCTCTCAGAGGTTTCCAAGAATGATTGAACAAGAAAGCTGCATGGAGAGAGGGGGATGCTGAGTTTTGGAAGCAGTCAGAAGCAAGAAAACAAAAGCTGCAGGCACTCCATCTC-------CTCCGCGGATGCT--CTGAGTCATCTTCTGGTTTCTTGTTAAAGACCTGCTTCCTCCACATGGTGAGACAGATGGCCACCAAGAGCTCCCAAGTTTTAAAGAGAATGA-TTTCCCCGACGAGGGAAC--AGAGGCACTGCTCCCCCATC-CGCTACTCC--------CTCCAGCACCTTGTCAGCCAGGGGGTGTGCA--GGGAGTGGAGGGGGTGC i canFam3.chr1 I 38 I 2044 e macFas5.chr19 54882420 20327 + 59248254 M a score=115955.000000 s hg38.chr19_GL949748v2_alt 10553 52 + 1064304 GAAGAAGTTtgcgttagtctgttttcacactgctgataaagacatacctgag s panTro4.chr19 58947395 52 + 63644993 GAAGAAGTTtgcgttagtccattttcacactgctgataaagacatacctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814502 52 + 60714840 GAAGAAGTTtgcgttagtccgttttcacgctgctgataaagacatacctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578948 52 - 106955855 GAAGAAGTTtgcgttagtctgttttcacactgctgataaagacatacctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871410 52 + 64156825 AAAGAGGTTtgcattagtgcgttttcacaccgctgataaagacatacctgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011216 52 + 51301725 AAAGAGGTTTGCATTAGTCCGTGTTCACaccgctgataaagacatacctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723580 52 + 50890351 AAAGAGGTTtgcattagtccgttttcacattgctgataaagacatacctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45293123 52 + 49145316 AAAGAGGTTtgcattcgtccatttccacactgctgatgaaaacacagctgag i calJac3.chr22 C 0 I 2087 e canFam3.chr1 19458149 2044 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=8022.000000 s hg38.chr19_GL949748v2_alt 10605 4 + 1064304 actg s panTro4.chr19 58947447 4 + 63644993 actg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814554 4 + 60714840 actg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579000 4 - 106955855 actg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871462 4 + 64156825 actg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011268 4 + 51301725 actg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723632 4 + 50890351 actg i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=11806.000000 s hg38.chr19_GL949748v2_alt 10609 10 + 1064304 agtaatttat s panTro4.chr19 58947451 10 + 63644993 agtaatttat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814558 10 + 60714840 ggtaatttat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579004 10 - 106955855 ggtaatttat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871466 10 + 64156825 gataatttat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011272 10 + 51301725 gataatttat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=3640.000000 s hg38.chr19_GL949748v2_alt 10619 4 + 1064304 tttt s panTro4.chr19 58947461 4 + 63644993 tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814568 4 + 60714840 tttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579014 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871476 4 + 64156825 tttt i rheMac3.chr19 C 0 I 2 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e papAnu2.chr19 47011282 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=151125.000000 s hg38.chr19_GL949748v2_alt 10623 310 + 1064304 atttttatttttatttatttattt-ttttgagacg------cactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccggggtcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacggggtttcactgtgttatccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccagagt----gctgggattacaggcgtgagccactgcgcccagtcagttta-c s panTro4.chr19 58947465 317 + 63644993 gtttttatttttatttatttatttattttgagacggagtctcactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctgggcctcccagagt----gctgggattacaggtgtgagccactgcacccagtcagttta-c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814572 315 + 60714840 atttttatttttatt--tttattt-tttcgagacggagtctcactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccgggttcaggccattctcctacctcagcctcccgagtagctgggactacaggcgcccgccaccgcgtccagctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcagcctcccaaagt----gctgggattacaggcgtgagccactgcgcctggccagtttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579018 317 - 106955855 attttta--tttatttatttatt--ttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctccccggttcacgccattctcctgcctcagcctcccaagtagctgggactccaggtgcccacaaccacacccggctaattttttgtatttttagtagagacggggtttcatcgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccgcctcagcctcccaaagtgctggctgggattacaggtgtgagccactgcacccggccagttta-t i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e papAnu2.chr19 47011282 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59871480 2 + 64156825 I a score=6633.000000 s hg38.chr19_GL949748v2_alt 10933 7 + 1064304 tttttaa s panTro4.chr19 58947782 7 + 63644993 tttttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814887 7 + 60714840 tttttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579335 7 - 106955855 tttttaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47011282 7 + 51301725 tttttta i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46723643 5 + 50890351 --tttta i chlSab2.chr6 I 7 I 2 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59871480 2 + 64156825 I a score=196784.000000 s hg38.chr19_GL949748v2_alt 10940 120 + 1064304 aaaagaggtataacggactt-acagttccacatggctggggaggcctcacaatcatggcagaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa s panTro4.chr19 58947789 120 + 63644993 aaaagaggtgtaatggactt-acagttccacatggctggggaggcctcacaatcatggcagaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814894 120 + 60714840 aaaagaggtgtaatggactt-acagttccacatggctggggaggcctcacaatcatggcggaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579342 117 - 106955855 aaaagaggtataatggacttaacagttccacacgggt-gggaggcctcacaatcacggcggaaggtgaaaggcacat----cttacatggtggcagacgacagagaa---aatgatacaagcaaa i nomLeu3.chr10 C 0 I 1816 s rheMac3.chr19 59871482 124 + 64156825 aaaaaaggtataatggactc-acagttccacatggctggggaggcctcacaatcatggtggaaggtaaaaggcacatcttacttacatggtggcagacgagagagaaacgagagagccacgcaaa i rheMac3.chr19 I 2 C 0 s papAnu2.chr19 47011290 118 + 51301725 aaaaagagtataatggact---cagttccacatggctggggaggcctcacaatcatggcggaaggtgaaaggcacat----cttacatggtggcagacgagAGAGAAACGAGAGAGCCacgcaaa i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46723650 120 + 50890351 aaaagaggtataatggactc-ccagttccacatggctggggaggcctcacaatcatggtggaaggtgaaaggcacat----cttacatggtggcagatgagagagaaatgagagagccacgcaaa i chlSab2.chr6 I 2 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1212482.000000 s hg38.chr19_GL949748v2_alt 11060 1036 + 1064304 aggggaaacccgttataaaaacctcagctctcctgagacttgttcactaccatgagaacggcatgggggaatgtgtgggtggaggattagccaggtgctgaggcaagagactgaaggcacaaactgttgcagtataataaagaaaa----tagaataagaatagtcataatacaaattagatgtagagatgatcatggacaattatcaatcattattataaacattattaatcattagcttttaatattactctttgctgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcgtgcatcagggccgcttgaggggtccttggtcaagcggtaacgccagtgtctgggaaggcacccgttacttagcagacggtgaaagggagtctc-ctttccttggaggagtcagggaacactctgctccaccagcttcttgtggaaggctggatattatccaggcctgcccgcagtcatccggaggcctaaacccctccctgtggtgctgtgcttcagtgctcacactccttgtccactttcatgctcctcccgtactcctggctcctctttgaagttcatagtagatagcggtagaagaaatagtgaaagtcttaaagtctttgatctttcttataagtgcatggaagaaaacgctgacgtatgctgccttctccctctctctctgcttcggctacctaagagggaagggccccctctcctgtgatcacacgacttgcttcaccttgtcaatcacttcgaagattcaccctgcttaccctgcccccttatcttgtatgcaataagtatcagcgcgcccagccgttatgggccactaccggtctccgcgtcttgatggttgtggtcctccgggcccagctgttttctctttatctctttgtcttgtgtctttatttcttacaatctcttatctctgcacacggggagaacacctgcaaagccccata-----ggaccctgca s panTro4.chr19 58947909 1039 + 63644993 aggggaaacccgttataaaaacctcagctcttctgagacttgttcactaccatgagaacggcatgggggaatgtgtgggtggaggattagccaggtgctgaggcaaaagactgaaggcaccaactgttgcagtataataaagaaaa----tagaataagaatagtcataatacaaattagatgtagagatgatcatggacaattatcaatcattattataaacattattaatcattagcttttaatattattctttgttgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcccgcataagggccgcttgaggggtccttggtcaagcggtaacgccagtgtctgggaaggcacccgttacttagcagaccgcgaaagggagtctc-ctttccttggaggagtcagggaacactctgctccaccagcttcttgtggaaggctggatattatccaggcctgcc--cagtcatctggaggcctaaacccctccctgtggtgctgtgcttcagtgctcacgctccttgtccactttcatgctcctcccgtactcctggctcctctttgaagttcatagtagatagcggtagaaggaatagtgaaagtcttaaagtctttgatctttcttagaagtgcatggaagaaaacgctgacgtatgctgccttctccctctctctctgcttcggctacctaagaggaaagggtcccctctcctgtgatcacacgacttgcttcaccttgtcaatcacttcgaagattcaccctgcttaccctgcccccttatcttgtatgcaataagtatcagcgcgcccagccgttatgggccactaccggtctccgagtcttgatggttgtggtccccccggcccagctgttttctctttatctctttgtcttgtgtctttatttcctacaatctcttatctctgcacacggggagaacacctgcaaagccccatagggctggaccctgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55815014 1042 + 60714840 aggggaaacctgttataaaaacatcagctctcttgagacttgttcactaccatgagaacagcatgggggaatgtgtgggcgaaggattacctaggtgcccagccaagagactgaaggcacaaactgttgcggtataataaagaaaatagttagaataagaata-tcatgatacaaattagatatagagatgatcatggac-attatcaatcattattataaacattattaatcattagcttttaatattactcttcgttgcattactaatataacctaggaataaccggcaggtat-gggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagcggtgacctctctgtcacgcccgcataagggccacttgaaggctccttgctcaagcggtgacgccagtgtccgggaaggcacccgttacttagcagaccgcgaaagggagtctc-atttccttggaggagtcagggaacactctgctccaccagcttcttgtgggaggctggatgttatccaggcctgcccgcagtcatccggaggcctaaacccctccctgtggtgctgtgcttcaatgctcacgctccttgtccactttcatgctcctcccttactcctgcctcctctttgaagtttgtagtagatagcggtagcggaaatagtgaaagtcttaaaggctttgatctttcttataagtgcatagaagaaaacactgacatatgctgccttctctctctctctctgcttcccctacctaagagggaagggccccctgtcctgtgatcacgtgacttgcttcaccttatcgatcacttagaagattcaccctccttagcctgcccccttgtcttgtatgcaataaatatcagcgcgcccagccgtttggggccactaccggtctccgcgtcttgatggttgtggtcagctgggcccagctgttttctctttatctctttgtcttgtgtctttatttcttacaatctcttatctctgcacacggggagaacacctgcaaagccccgcagggctggaccctgca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59871606 979 + 64156825 aggggaaacccctt----agatgtcagctctcgtgagacttgttcactaccgcgagaatagcatgggggaatctgtgggtggagggtggcccaggtgcccaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttagaataagaatagtcataatacaaattagatatagaggtgatcgtggac-attatcaatcattattataaacattattaa--------------------------------------------------------ggcaggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagccctctgtcacacctgcataagggccatttgaggtctccttggtgaagcagtaacgccagtgactgggaaggcacccgttacttagcagaccatgaaagggagtctctctttccttggaggagtcagagaacactctgctccaccagcttcttgtgggaggctggatattatccaggcctgcccgtagtcatccggaggcctaaacccctccgtgtggtgctgtgcttcagtggtcacgctccttgtccgctttcatgttcctcccgtactcctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgagagtcttaaagtctttgatctttcttataagtgcatagaagaaaatattgacgtatgctgcct------actgtctctgcttcggctacctgtaagggaagggccccctgtcccatgatcacgtgatttgcttcaccttatcaatcacctggacaactcaccctccttaccctgcccccttgtcttgtatgcaataaatatcagcacgtccagccgttcggggccactaccagtctccgcgtcttggtggtagtggtccccacggcccaggtgctttctctttatctctttgtcttgtgtctttatttcttacaatctctggtctccgcacatggggagaacgcctgcaaagccccgtagggctggaccctaca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011408 1031 + 51301725 aggggaaaccccttagaGAGATGTCAGCTCtggtgagacttgttcactaccgcgagaatagcatgggggaatcTGGGGGCGGAGGGTGGCCCAGGTGCCcaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttagaataagagtagtcataatacaaattagatatagaggTGATCGTGGAC-ATTATCAATCATTATTATAagcattattaatcattagcttttaatattactctttgttgCGTTACTAATATAACCTAGGAATAACGGGTGGGTATagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagcccTCTGTCACACCTGCATAAGGGCCATTTGAGGGCTCCTTGGTGAAGTGGTAGCGCCAGTGTCTGGGAAGGCACCTGTTACTTAGCAGACCCCGAAagggagtctc-ctttccttggaggagtcagggaacgctctgctccaccagcttcttgtggaAGGCTGGATATTATTCAGGCCTGCCTGCAGTCATCCGGAGGCCTAAACCCCTCCGTgtggtgctgtgcttcagtggtcatgctccttgtccactttcatgCTCCTCCCgtactcctggttcctctttgaagttcgTAGTAGACAGCGGTAGA------AGTGAGagtcttaaagtctttgatctttcttataagtgcatagaagaaaatattgacgTATGCTGCCT------GCTCTCTCTGCTTCGGCTACCTGtaagggaagggccccctgtcccATGATCACGTGATTTGCTTCACCTTATCAATCACCTGGACAACtcaccctccttaccctgcccccttgtctTGTATGCGATAAACATCAGCACGTCCAGCCATTCGGGGCCACTACCAGTCTCCGcatcttggtggtagtggtccccacGGCCCAGcgtctctctctttatctctttgt-ttgtgtctttatttcttacaatCTCTGGTCTCCGCACATGGGGAGAACACCTGCAAAGCCCtgtagggctggaccctaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723770 1037 + 50890351 aggggaaaccccttagagagacgtcagctcttgtgagacttgttcactaccgcgagaatagcatgggggaatctgtgggcggaggatggcccaggtgccgaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttggaataagagtagtcgtaatacaaattagatatagaggtgattgtggac-attatcaatcattattataaacattattgatcattagcttttaatattactctttgttgcattgctaatataacctaggaataacgggtgggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagccttctgtcacacccgcataagggctgcttgagggctccttggtgaagcggtagcgccagtgtctgggaaggcacctgttacttagcagaccgcgaaagggagtctc-ctttccttggaggagtcagggaatgctctgctccaccagcttcttgtggaaggctggatattatccaggcctgtccacaatcatccggaggcctaaa-ccctccctgtggtgctgtgcttcagtagtcacgctctttgtccactttcatgctcctcccatacccctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgagagtcttaaagtctttgacctttcttacaagtgcatagaagaaaatattgacgtatgctgcct------gctgtctctgcttcggctacctgtaagggaagggccccctgtcccatgatcacgtgatttgcttcaccttattaatcacctggacatgtcaccctccttaccccgcccccttgtcttgtatgcgataaatatcagcgcgtccagccgttcggggccactaccagtctccgcgtcttggtggtagtggtccccacggcccagctgctttctctttatctctttgtcttgtatctttatttcttacaatctctggtctccgcacatgaggagaacacctgcaaagccccttagggctgggccctaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1257558.000000 s hg38.chr19_GL949748v2_alt 12096 753 + 1064304 ggaatccacccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaactgaagatgagatttgggtggggacacagacacaagccatatATCAAGGTTGTTCCTTCAGATGCAGCAATCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-AGAGACAGCTTCATGGGtattgtaaactcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaattattgaggcagacagtgagggtaagagagtcctcagtaaggtttcctattaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaatcttgcat-------------cagctgtgccaatagaaaacggatgcctgggagccgggtatattcaacatggaggttccctcttcccttttctttgtccccacatgtgcagtaaaaaagcagacaacatggccccggccaggcagagaccctacctacgtaataaaagattagggtgggatggccagcttctttgggggctatgcaaacgtcatacctggtccgactaatctctcaggccctatgtaaatcagacagcacctcctcaagcttgtctataaaagccccatgcatttcaccacaaaaccaggggtcccactcgggaacccctctcttctct-- s panTro4.chr19 58948948 734 + 63644993 ggaatccacccccgtgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaattgaagatgagatttgggtggggacacagacacaagccatatATCAAGGTTGTTCCTTCAGATGCAGCAATCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACGGCTTCATGGGtattgtaaactcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaattatttaggcagacagtgagggtaagagagtcctcagtaaggtttcctgttaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaatcttgcat-------------cagctgtgccaatagaaaacggatgcctgggagccgggtatattcaacatggaggttccctcttcccttttctttgtccccacatgtgcagtaaaaaagcagacaacatggccccggccaggcagagaccctacctacataataaaagattagggtgggatggccagcttctttgtgggctatgcaaacgtcatacctggtccgactaatctctcaggccctgtgtaaatcagacaccacctcctcaagcttgtctacaaaagccccatgcatttcaccacaaaaccagggg-------------------tcttctct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816056 765 + 60714840 ggaatccacccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaattgaagatgagatttgggtggggacacagacacaagccatatATCAAGTTTGTTCCTTCAGATGCAGCATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-AGAGACAGCTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaacacaggagctaaaaagaaattatttaggcagacagtgagggtaagagtgtcctcggtaagttctcctattaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaagcttgcataggtaaatgccggcagctgtgccaatagaaaacggatgcctggaagccgggtatattcaacatggaggttccctcttcccttttctttgtccccatatgtgcagtagaaaagcaggcaacatggccccggccaggcagagaccctacctacataataaaagattagggtgggatggccagcttctttgtgggctatgcaaacatcacacctggtccgactaatctctcaggccctatgtaaatcagacaccacctcctcaagcttgtctataaaagccccatgcatttcaccacgaaatcaggggtcccactcgggcactcctctc-tctct-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59872585 762 + 64156825 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaaaacatgggaattatgggagctaccattaaagatgagatttgggtggggacgcagacacaagcc--ttatcaAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGCTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacttaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaatgctttaggcagacagtgagggtaagagagtcctccgtatggtttcctgtgaataaagagcagtccccaaatcatttcttttctaacagaaagcagcccgaaacatcaaggtgcaggcctagacaagcaagctaaaagcttgcataggtaaatgctggcagctgtgccaatagaaaagggatggctggaggccgggtatattcaacatggaggttccctcttcccttttgtttgtccccacatgtgcagtaaaaaaacaggcaacgtggccccagccgagcagagaccccacctatgtaataaaacattagggtgggatagccagcttcttcgtgggttatgcaaacgtcacacctggtccggctaatctctcaggccctatgtaaatccgacaccacctgctcaagtttgcctattaaa-ccccatgcatttcaccatgaaaccaggcatcccactcgggagcccctctc-tatct-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47012439 762 + 51301725 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctaccattgaagatgagatttgggtggggacgcagacACAAGCC--TTATCAAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGCTTCATGGGTATTGTAAATTCAATGTTTGTGTCCCGACAAAATTCAGCTGTTGGAACTtaacccca--aggtgatggtatttgtAATACGGGAGCTAAAAAGAAATGCTTTAGGCAGACAGTGAGGGTAAGAGAGTCCTCCGTAAGGTTTCCTGTGAATAAAGAGCAgtccccaaatcatttcttttctaacagaaagCAGCCCGAAACATCAAGGTGCAGGCCTAGACAAGCAAGCTAAAAGCTTGCATAGGTaaatgctggcagctgtgccaatagaaaagggatGGCTGGAGGCCGGGTATATTCAACATGGAGGTTCCCTCTTCCCTTTTGTTTGTCCCCACATGTGCAGTaaaaaaaCAGGCACCGTGGCCCCAGCCAGGCAGAGACCCCACCTACGTAATAAAACATTAGGGTGGGATAGCCAGCTTCTTCGTGGGTTATGCAAACGTCACACCTGGTCCGGCTAATCTCTcaggccctatgtaaatcagacaccacctgcTCAAGCTTGCCTATTAAA-CCCCATGCATTTCACCACGAAACCAGGCATCCCACTCGGGAGCCCCTCTC-TATCT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46724807 761 + 50890351 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaacacatgggaattataggagctaccattgaagatgagatgtgggtggggacgcggacacaggcc--ttatcaAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGTTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacttaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaatgatttaggcagacagtgagggtaagagagccctcc-taaggtctcctgtgaataaagagccgtccccaaatcatttcttttctaacagaaagcagcccgaaacatcaaggtgcaggcctagacaagcaagctaaaagcttgcataggtaaatgctggcatctgtgccaatagaaaagggatgcctggaggccgggtatattcaacatggaggttccctcttcccttttgtttgtccccacatgtgcagtaaaaaagcaggcaatgtagtcccagccaggcagagaccccacctatgtaataaaagattagggtgggatagccagcttcttcgtgggctgtgcaaacgtcacacctggtccgattaatctctcaggccctatgtaaatcagacaccacctgctcaagcttgtctatcaaa-ccccatgcatttcaccacgaaaccaggggtcccactcgggagcccctctc-tatct-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45295262 765 + 49145316 ggaatctgcccccacgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaactgaagatgagatttgggtggggacacagacacaagcc--atatcaAGGTTGTTCCTTCTGTTGCAGCATTCCTGGGAGCCTCTGGTTAGGACAAGAGTCAAGCGGGGGACAGCTTCATGGGtattgtaaactcagtgtttgtgtcccgacaaaactcagatgctggaacctaaccccaacagctcacggtattagtaatacaggagctaaaacgaaattatttaggcagacagtgagggtaagacagtcctcagtaaggttttccattcctaaagagcagcccccaaatcgtttcttctctaaaagaaagcagcctgaaaaatcaaggtgcaagcatagataagcaagctaacagcttgcataggtaaatgccagcagctgtgcccgtagaaaagggataccctggagcagggtttattctacatggaggctcactctccctttttctttgtccccacatgtgcagtaaaagagcaggaaacatggccctggcgaggtagagaccccacctgc---atgaaagattggggtgggatggcctgcttcttcatgggctatgcagacgtcacagctggtccaaccaatctctcaggccctatgtaaatgagacactgcctcctcaagctcatctataaaactcctgtgcatttcaccacaagatcggaagtcccactcgggagcctctctc-tctctCT i calJac3.chr22 I 2087 I 2053 e canFam3.chr1 19458149 2044 - 122678785 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=36035.000000 s hg38.chr19_GL949748v2_alt 12849 33 + 1064304 gtgcaaaagagaga--actattctcttttctcttt s panTro4.chr19 58949682 33 + 63644993 gtgcaaaagagaga--actattctcttttctcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816821 33 + 60714840 gtgcaagagagaga--actattctcttttctcttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59873347 35 + 64156825 gtacgagagagagagtgctattctcttttctcttt i rheMac3.chr19 C 0 I 66 s papAnu2.chr19 47013201 33 + 51301725 GTACGAGAGAGAGa--gctattctcttttctcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725568 31 + 50890351 gtacgagtgaga----gctattctcttttctcttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=19704.000000 s hg38.chr19_GL949748v2_alt 12882 29 + 1064304 cttttgcttattaagccttcactc-----ttttt s panTro4.chr19 58949715 31 + 63644993 cttttgcttattaagccttcactc---ttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816854 34 + 60714840 cttttgcttattaagccttcactccCtttttttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47013234 27 + 51301725 cttttgtttattaagccttcactt-----ttt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725599 29 + 50890351 cttttgtttattaagccttcactt-----ttttt i chlSab2.chr6 C 0 I 76 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=19758.000000 s hg38.chr19_GL949748v2_alt 12911 47 + 1064304 tttttttttttttttgagatggagtctggctctgtcattcaggctgg s panTro4.chr19 58949746 47 + 63644993 tttttttttttttttgagatggagtctggctctgtcattcaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816888 47 + 60714840 ttttgttttttttttgagatggagtctggctctgtcattcaggctgg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47013261 43 + 51301725 ttaaattttatttttgagcaggagt----ctctgtcattcaggctgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=5251.000000 s hg38.chr19_GL949748v2_alt 12958 20 + 1064304 agtgcagtggcacgatttcg s panTro4.chr19 58949793 20 + 63644993 agtgcagtggcacgatttcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816935 20 + 60714840 ggtgcagtggcacaatttcg i ponAbe2.chr19 C 0 I 40 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=4133.000000 s hg38.chr19_GL949748v2_alt 12978 45 + 1064304 gctcacttcaacctccgcctcccaggtgcaagcaattctcctgcc s panTro4.chr19 58949813 45 + 63644993 gctcactgcaacctccgcctcccaggtgcaagcaattctcctgcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=26871.000000 s hg38.chr19_GL949748v2_alt 13023 105 + 1064304 tcagcctcccaagtagctgggatgacaggcacccaccactgcgcccagctaatttttatatttttagtagagatggggttt-caccgtgttggtcaggctggtttc s panTro4.chr19 58949858 105 + 63644993 tcagcctcccaagtagctgagatgacaggcacccaccactgcgcccagctaatttttatatttttagtagagatggggttt-caccgtgttggtcaggctggtctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581275 106 - 106955855 tcagcctcccaagtagctgggattacaggcacccaccactgttcccagctaatttttgtatttttagtagagacggggtttccaccatgttggtcaggctggtctc i nomLeu3.chr10 I 1816 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 13128 1 + 1064304 g s panTro4.chr19 58949963 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581381 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873448 1 + 64156825 g i rheMac3.chr19 I 66 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=22129.000000 s hg38.chr19_GL949748v2_alt 13129 36 + 1064304 aactcctgatctcaggtgatccgc-cccccactcggt s panTro4.chr19 58949964 36 + 63644993 aactcctgatctcaggtgatccgc-cccctactcggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581382 37 - 106955855 aacttctgatctcaggtgatccgtgcccctactcggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873449 35 + 64156825 aactcctgacctcagttgatcct--ccccgcctcgac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013304 35 + 51301725 aactcctgacctcagttgatcct--ccccgcctcgac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=369809.000000 s hg38.chr19_GL949748v2_alt 13165 296 + 1064304 ctcccaaagtcctgagattacaggcgtgagccactgcgcccggccCAgtctctttcactatgtaaggacacagcaagaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaatctaccagtgctttggtcttggacttccagcctccagaaccatgagaaataactatgtgttgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCCCTCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG s panTro4.chr19 58950000 296 + 63644993 ctcccaaagtcctgagattacaggcgtgagccactgcacccggccCAGTCTAtttcactatgtaaggacacagcaagaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaatctaccagtgctttggtcttggacttccagcctccagaaccgtgagaaataactatgtattgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCCCTCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581419 290 - 106955855 ctcccaaagtcctgagattacaggcgtgagccactgcgcccggccCAgtctctttcactatgtgaggacacagcaggaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaacctaccagtgctttggtcttggccttccagcctccagaacggtgagaaataactatgtgttgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCC------TGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873484 292 + 64156825 ctcccaaattgctgagattacaggcgtgagccactgcgccctgccCAgtctctttcactacgtgaggatacagcaagaaggtgccagctatgaaccagg-aaaaagccctcagcag--actgaatctaccagtgcttgggtcttggacttgaagccttcagaacggtgagaaataactatgtgttgtctggaagctgcctggtctttggtagattgatagcagcctggatggactgagacGCTCCTTCCTCCC-TCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013339 292 + 51301725 ctcccaaattgctgagattacaggcgtgagccactgcgccctgcccagTCTCTTTCActacgtgaggacacagcaagaaggtgccagcTATGAACCAGG-AAAAAGCCCTCAGCAG--ACTGAATCTACCAGCGCTTTGGTCTTGGACTTGAAGGCTTCAGAACGGTGAGAAATAACTATGTGTTGTCTGGAAGCTGCCTGGTCTTTGGTACGTTGATAGCAGCCTGGATGGACTAAGacgctccctcctccc-tctcatgCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725704 292 + 50890351 ctcccaaattgctgagattacaggcgtgagccactgcgccctgccCAgtctctttcactacgtgaggacacagcaagaaggtgccagctatgaaccagg-aaaaagccctcagcag--actgaatctaccagcgctttggtcttggacttgaagccttcagaacggtgagaaataactatgtgttgtctggaagctgcctggtctttggtacgttgatagcagcctggatggactaagacGCTCCCTCCTCCC-TCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i chlSab2.chr6 I 76 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=136227.000000 s hg38.chr19_GL949748v2_alt 13461 91 + 1064304 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAGGGTTGGCACGCTAGA-GCCCACAGCTTGTTTTTGCAAATAAAATTTTTT s panTro4.chr19 58950296 91 + 63644993 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAGGGTTGGCACACTGCA-GCCCACAGCTTGTTTTTGCAAATAAAATTTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581709 91 - 106955855 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAAGGTTGGCACACTATA-GCCTACAGCTTGTTTTTGCAAATAAAATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873776 91 + 64156825 TGATGGCCCAAGCAGACTTTTAAAAGCACTGACCTCGCACAAGGGTTGGAACACTACA-GCCCACAGCTTGTTTTTGAAAACAAAATGTTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013631 91 + 51301725 TGATGGCCCAAGCAGACTTTTAAAAGCACTGGCCTCGCACAAGGGTTGGAACACTACA-GCCCACAGcttgtttttgaaaacaaaatgtttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725996 91 + 50890351 TGATGGCCCAAGCAGACTTTTAAAAGCACTGGCCTCGCACAAGGGTTGGAACACTACA-GCCCACAGCTTGTTTTTGAAAACAAAATGTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19460193 88 - 122678785 TGGTGATTCATTCAGATTTCAAAAAGCATTGGTCTAGGACAGGTGTTGGCA----ACAggcccatcacttgtgtttgtaaataaagtttttt i canFam3.chr1 I 2044 I 3674 e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=264025.000000 s hg38.chr19_GL949748v2_alt 13552 218 + 1064304 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcactatgggaagccgaggcaggcggatgacttgaggtcaggagctcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagcctggtgtgatggcagaagcttgtaatcccagctactcaggaggctgagacaggagaat s panTro4.chr19 58950387 218 + 63644993 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcactatgggaagccgaggcaggcggatgacttgaggtcaggagctcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagcctggtgtgatggcagaagcttgtaatcccagctactcaggaggctgagacaggagaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581800 218 - 106955855 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcgcttggggaggccgaggcaggcggatcacctgaggtcaagcattcaagaccaacctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattggccgggtgtgatgagaaacccctgtaatcccaactactcgggaccctcatacaggagaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873867 218 + 64156825 GTTTTTAAAACAACTTTCTGggctgggcgcagtggctcacgcctgtaatcccagctctttgggaggctgaggtgggtggatcacttgaggtcaggagctcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagctgggcgtggtggcagacgcctgtaatcccagctactcggaaggctgagacaggagaat i rheMac3.chr19 C 0 I 14 s papAnu2.chr19 47013722 219 + 51301725 gtttttaaaacaactttctgggctgggcgcagtggctcacacctgtaatcccagctctttgggaggctgaggtgggtggatcacttgaggtcaggagctcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaaattagctgggcgtggtggcaggcgcctgtaatcccagctactcggaaggctgagacaggagaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726087 218 + 50890351 GTTTTTAAAATAACTTTCTGggctgggcacagtggctcccgcctgtaattccagctctttgggaggctgaggtgggtggatcacttgcagtcaggagcttgagaccagcctggccaacatggtgaaaccccatcactactaaaaatac-gaaaaaattagctgggcgtggtggcagacgcctgtaatcccagctactcggaaggctgagacaggagaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=62407.000000 s hg38.chr19_GL949748v2_alt 13770 85 + 1064304 catttgaacctgcggggagaggttgcagcgagctgagatcacgccactgcactctggcgcctgggcgacagagcaagactccatc s panTro4.chr19 58950605 85 + 63644993 catttgaacctgcagggagaagttgcagcgagctgagatcacgccactgcactctggagcctgggcgacagagcaagactccatc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102582018 85 - 106955855 catttgatcctttttggtgtggtgactgcgagctgacatcgcaacactgcattccggtgccggggtgacagagcatgactccttc i nomLeu3.chr10 C 0 I 3 s papAnu2.chr19 47013941 85 + 51301725 cacttgaacctgccgggggaggttgcagcgagctgagatcacgccactgcactctggcgcctgggcgacagagcaagactccata i papAnu2.chr19 C 0 I 14 s chlSab2.chr6 46726305 85 + 50890351 catttgaacctgccgggggaggttgcagcgagctgagatcacgccaccgcactctggcgcctgggcgacagagcaagactccatc i chlSab2.chr6 C 0 I 12 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59874085 14 + 64156825 I a score=48488.000000 s hg38.chr19_GL949748v2_alt 13855 43 + 1064304 aaaaaaaaaaaaaCtttctatagatacataata-tttatgcata s panTro4.chr19 58950690 40 + 63644993 ---aaaaaaaaaCCtttctatagatacataata-tttatgcata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102582106 44 - 106955855 aaaaaaataaaTCCTTTGTatggatacaaaatattttatgcata i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 59874099 43 + 64156825 aaaaaaaaaaaatctttctatagatacataata-tttatgcata i rheMac3.chr19 I 14 C 0 s papAnu2.chr19 47014040 43 + 51301725 aaaaaaaaaaaaactttctatagatacataata-tttatgcata i papAnu2.chr19 I 14 C 0 s chlSab2.chr6 46726402 43 + 50890351 aaaaaaaaaaaaaCtttctatagatacataata-tttatgcata i chlSab2.chr6 I 12 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=155676.000000 s hg38.chr19_GL949748v2_alt 13898 100 + 1064304 tttatgacatacatgtgatagtttg------------------------------------------atacatgcacagaatgtataatactcaaattagggtatttaggatattc-accacctcaaacatttatcttt-tttt s panTro4.chr19 58950730 100 + 63644993 tttatgacatacatgtgatagtttg------------------------------------------atacatgcacagaatgtataatactcaaattagggtatttaggatattc-accacctcaaacatttatcttt-tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816995 100 + 60714840 TTTATGACAtacatgtgatagtttg------------------------------------------atacatgcacagaatttataatactcaaatcagggtatttaggatattc-accacctcaaacatttatcttt-tttt i ponAbe2.chr19 I 40 C 0 s nomLeu3.chr10 102582150 96 - 106955855 tttatgacatacatgtgatag-ttg------------------------------------------atacatgcacagaatgtataatactcaaatcagggtatttaggatattc-acca-ctcaaacatttatcttt-tt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874142 144 + 64156825 tttatgacatacatgtgacagtttgatacatgtgacagtttgatacagtttgatacatgacagttttatacatgcacagaatgtataatactcaaatcaggatatttaggatattctgctacctcaaacatttatctttctttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014083 102 + 51301725 tttatgACATACATGTGACAGTTTG------------------------------------------ATACATGCACAGAATGTATAATactcaaatcagggtatttaggatattctgctacctcaaacatttatctttctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726445 99 + 50890351 tttatgacatacatgtaacagtttg------------------------------------------atacatgcacagaatgtataatactcaaatcagggtatttaggatattctgctacctcaaacatttatct---tttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=92922.000000 s hg38.chr19_GL949748v2_alt 13998 55 + 1064304 ttatcttttcgagacagagtctctctct-gtcgcccaggctggagtacagtggtgt s panTro4.chr19 58950830 55 + 63644993 ttttcgtttcgagacagagtctctctct-gtcgcccaggctggagtacagtggtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817095 54 + 60714840 tttt-ttttcgaaacaaagtctctctct-gtcgcccaggctggagtacaggggtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582246 50 - 106955855 -----ctttcgagacagagtctctctct-gtcacccaggctggagtacagtggtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874286 51 + 64156825 ttttcctttcgagacagag----tctct-gttgcccaggttggaatgcagtggtgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014185 51 + 51301725 ttttcctttcgagacagag----tctct-gttgcccaggttggagtgcagtggtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726544 51 + 50890351 ttttccttttgagacagag----tctct-gttgcacaggttggagtgcagtggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298080 56 + 49145316 ttgttgttctgagatggagtttcgctctcgtttcccaggctggagtgcagtggcac i calJac3.chr22 I 2053 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=702425.000000 s hg38.chr19_GL949748v2_alt 14053 415 + 1064304 gatcttggctcactgcaacctctgcctcccgagttcaagcaattcttctgcctcagcctcccaagtggctgggattacaggtgtgcgccaccacacccagctaatttttgtatttttagtggagatggggtttcaccttgttggccaggctggtcttgaactcctgacctcaggtgatccacccatcttggcctctcaaagtgttgggattacaggagtgagccactgcacctggctcatttatcgtttgtgttgggaatgtttcaaatcttctcttctagctattttgaaatatacaatatattgctgttaactatagtcacccttctgtgctattgaacacttgaacttattccttctatccaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact s panTro4.chr19 58950885 415 + 63644993 gatcttggctcactgcaacctctgcctcccgagttcaagcaattcttctgcctcagcctcccaagtggctgggattacaggtgtgcaccaccacacccagctaatttttgtatttttagtggagatggggtttcaccatgttggccaggctgctcttgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcatttatcgtttgtgttgggaatgtttcaaatcttctcttctagctattttgaaatatacaatatattgctgttaactatagtcacccttctgtgctattgaacacttgaacttattccttctatccaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817149 410 + 60714840 gatcttggctcactgcaacctccgcctcccaggttcaagcgattcttctgcctcagcctcccaagtggctgggattacaggcatgcacaaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgtt-ggattacaggagtgagccactgcacctggcccatttatcgtttgtgtttggaacgtttcaaatcttctcttctagctattttgaaatatacaatatattgttgttaactatagttacccttctgtgctattgaacacttgaacttattccttttat----ctgtgtttgtgcccactaactatcccaccccttctagcctttgataact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582296 415 - 106955855 gatcttggctcactgtaacctccgcttcccgggttcaagcaattcttctgccccagcctcccaagtggctgggattacaggcgtgcaccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccgggctggtcttgaacgcctgacctcaggtgatccacccatcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcgttgatcatttgtgttgggaatgtttcaaatcttctcttctagctgttttgaaatatacaatatattgttattaactatagtcacccttctgtgctattgaacatttgaacttattccttctatctaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874337 415 + 64156825 gattttggctcactgcaacctctacctcctgggttcaagtgattcttctgcctcagtctcccaagtagctgggattacaggcatgcaccaccacacccaattaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtcttaaactcctgacctcaggtgatccacctgtcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcatttatcatttgtgttgggaaagtttcaaatcttctcttctagctattttgaaatatacaatgtactgttgttaactatagtcacccttctgtgctgttgaacacttgaacttgttccttctgtttaactgtgtttgtgcccgttaactaaccCACCCCTTCTAGCCTGTGATAACT i rheMac3.chr19 C 0 I 334 s chlSab2.chr6 46726595 415 + 50890351 gattttggctcactgcaacctccacctcctgggttcaagtgattcttctgcctcagtctcccaagtagctgggattacaggcatgcgccaccacacccaattaatttttgtatttttagtagagacggggtttcaccatgttggccaggttggtcttaaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgttgagattacaggagtgagccactgcacccggctcatttatcatttgtgttgggaaagtttcaaatcatctcttctagctattttgaaatatacaatgtactgttgttaactatggtcacccttctgtgctgttgaacacttgaacttgttccttctgtttcactgtgtttgtgcccattaactaacccaccccttctagcctgtgataact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298136 408 + 49145316 catcttggctcacggcaacctccgcctcccaggatcaagcaattctcgtgcctcagcctcccgagtagctgggattacaggcgtgcgccaccacacccggctaa-ttttgtatttttagtagagatgaggtttctccatgttggccaggctggtctcaaaca-ctgacctcaggtgatccacccgcctcagcctcccaaagtgttgggagtacaggagtgagccactgcgcccggcTcgtttatcatctgtgttggggatgtttcaaatctcctcctctagctgttgtgaactgtacaatacattgttataaactgtagtcacccttctgtgctgcccaacactt-cacttattcttcctct----ccgcgtttgtgcccattaactaacccgccccttctagcctctgataact i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=471.000000 s hg38.chr19_GL949748v2_alt 14468 2 + 1064304 ga s panTro4.chr19 58951300 2 + 63644993 ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817559 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45298544 2 + 49145316 ca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e nomLeu3.chr10 102582711 0 - 106955855 C e chlSab2.chr6 46727010 0 + 50890351 C e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59874752 334 + 64156825 I a score=499590.000000 s hg38.chr19_GL949748v2_alt 14470 321 + 1064304 ctctctctttaccttcatgagatctacttttttagctcctac--atgagtgagaacatgAAGttgtaaataaagttttattctaacaccgccacaccta---cttgtttacatatcagcgatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCAGCTCTGGGCGttttttgtttttttttttttttttttttgagatggagtctcactccattgcccaggctggaattcaatggcgc s panTro4.chr19 58951302 317 + 63644993 ctctctctttaccttcatgagatctacttttttagctcctac--atgagcgagaacatgAGGttgtaaataaagttttattctaacactgccacaccta---cttgtttacatatcagcgatggttgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCAGCTCTGGGCgttt----tgttttgttttgttttgttttgagatggagtctcactccattgcccaggctggaattcaatggcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817561 315 + 60714840 --ctctctttacctccatgagagccatttttttagctcccac--gtgagtgagaacatgAGGttgtaaataaagttttattcgaacaccaccacaccta---cttatttacatatcagccatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacttgttactctctggccctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCGGCTCTGGGCGttt----ttttttgtttttttttcttttgagatggagtctcactccgttgcccaggctggaatgcaatggcgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582711 314 - 106955855 --ctctctttaccttcatgagatctacttttttagctcccac--atgagtgagaacatgaggttgtaaataaagttttattcgaacaccgccactccta---cttgtttacatgtcagcgatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCCAGGAGTTTGCAGCTCTGGGCGttt----tttgtt-ttgtttttttttttgagatggagtctcactccgttgcccaggctggagtgcaatggcgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875086 304 + 64156825 CTCTctctttaccatcataagagccacttttttagctcccac--atgaatgagaacatgAGGttgtaaataaagttttattcgaacaccgccacatcta---cttgtttacatatcaacgatggctgctttcatggtacaacagcagaatggggtagtctcagcagagatcctacagcccacaaagctgggaatgttactctctggtcctttTATTTTCTGTCCTCTGGTCTAGGAGTTTGCAGGTCTGGGCGTGt----------------ttgttttttgagatgga-tctcactctgttgcccaggttggagtgcaatggtgt i rheMac3.chr19 I 334 C 0 s chlSab2.chr6 46727010 304 + 50890351 ctctctctttaccttcataagagccagttttttagctcccac--atgaatgagaacatgAGGttgtaaataaagttttattcgaacaccgccacatcta---cttgtttacatatcaaagatggctgctttcatggtactacagcagaatggggtagtctcagcagagatcctacagcccagaaagctggaaatgttactctctagtcctttTGTTTTCTGCTCTCTGGTCTAGGAGTTTGCAGGTCTGGGGGTGt----------------ttgttttttgagatgaa-tctcactctgttgcccaggttggagtgcaatggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298546 315 + 49145316 ctctctctttaccttcacgaggtccacctttttagctcccacatatgagtgagaacatgAGGttgtaaataaagttttattcaaacaccaccacacctacttcttgtttacatatcagcaatggctgctttcatggtacaa---cagaatggggtaacctcagcagagatcctactacccacaaagctggaaatgttactctctgctcctttTGTTTTCTGTTCTCTGGTCTAGGAATTTGCAGGTCTGGGCTTtt--------tgtttgtttgtttgtttgaggtggaatctcaccctgttgaccaggctggggtgcaatggtgc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=941058.000000 s hg38.chr19_GL949748v2_alt 14791 417 + 1064304 catctcagctcactgcaatctctgcctcctgggttcaagcgattcttct-gcctcagtctcccaagtagcggggattacaggcgcctgccaccacgtccaactaattttttatttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCGTTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAGTAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGACGAG s panTro4.chr19 58951619 417 + 63644993 catctcagctcactgcaatctctgcctcctgggttcaagcgattcttct-gcctcagtctcccaagtagctgggattacaggcacccgccaccacgtccaactaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCGTTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAATAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817876 417 + 60714840 catcccggcccactgcaatctctgcttcctaggttcaagcgattctctt-gcctcagtctctcaagtagctgggattacaggcgcccgccaccacgtccaactaattttgtatttttagtagagatgggatttcaccatgttggtcgggctggtcttgaactctgacatcagatgatccagccgcctcagcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCATTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAATAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATAGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583025 411 - 106955855 catctcggctcactgc-atctctgcctcctggg-tcaagcgattctcctggcttcagtctcccagtaagctgggattacaggcgcccaccaccacgtccaactaa-ttagta-ttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccgccccggcctcccaaagtgctgggatgacaggtgtgag----------------ccCGGCCATTTTCTTTTTTGC---TTGTGCTTTCTGGAGATGTTCAATAATTCTTACATTTTTTCCTGGATAGCTGATCAATCATTATTTCTTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGATGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875390 417 + 64156825 catctcagctcactgcaacctctgcctcctgggttcaagcgattctctt-gcctcagcctcccaagtagctgggattacgggcgcccaccatcatgtcccgctaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcatgag----------------ccTGGCCATTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATAATTCTTACATTCTTTGCTGGATAGCTGATCAATAATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGCGGGGTAGAAAGAGTATGGTGGGGTCCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014236 413 + 51301725 catctcggctcactgcaacctctgcctcctgggttcaagcgattctctt-gcctcagcctcccaagtagctgggattacaggcgcccaccaccatgtcccactaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcatgag----------------cctggccgTTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATAATTCTTACATTCTTTGCTGGATAGCtgatcaataattatttattatttccttgaatTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAa----tcagatttctttttaagatgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46727314 417 + 50890351 catctcagctcactgtaacctctgcctcctgggttcaagcaattctctt-gcctcagcctcccaagtagctgggattacgggcgcccaccaccatgtcccgctaattttatatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcctgag----------------ccTGGCCGTTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATGATTCTTACATTCTTTGCTGGATAGCTGATCAATAATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGCGGGGTAGAAAGAGGATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298861 428 + 49145316 catctcggctcactgcaacctctgcctcctgggttcaagcgattttcct-gcctcaccctcccgagtaagtgggattgcaggcgcccatcaccacacccagctaattttgtatttttaatagagatgggatttcaccatgttggccaggctggtcttgaactctgacctcagccgagccacctgcctcagcctcctgaagtgct-ggattacaggcgtgcgccaccaagcccggccCCCTGGCCATTTTCTCTTTTGTTTGTTGTGCTTCCTGGAGAGGTTCAATAATACTTGCATTCTCTGCTGGATAGCTGATCAATAATAA----TTATTCCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTGTGGTGGGGTTCTGGGGCATGAATACTCCGTAAATAAGCCAGATTTCTTTTTAAGATGAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=949861.000000 s hg38.chr19_GL949748v2_alt 15208 376 + 1064304 AAACTTAATTTTATTGATATGGACGAAGAGCAAGGAA-ACACAGT-ATCTGCATCTCCAGATTTCCGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCAGGGCTGTCTTCTTGCTACACTTTCAGTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaagttaattacaattaaatttaatttaaaacccaggtcctcggtcacaccagatgcattt s panTro4.chr19 58952036 377 + 63644993 AAACTTAATTTTATTGATATGGACGAAGAGCAAGGGACACACAGT-ATCTGCATCTCCAGATTTCCGATAACCTTGGCCAGCACGACCCCC--------CCTCCTTTAGTGGCCAGGGCTGTCTTCTTGCTACACTTTCAGTGCCGCATATTCACGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaagttaattacaattaaatttaatttaaaatccaggtcctcagtcacaccagatgcattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55818293 380 + 60714840 AAACTTAATTTTATTGATACGGATGAAGAGCGAGGGACACAGAGTCATCTGCATCTCCACGTTTCCGATAACCTTGGCCAGCACAATCCCC--------CCTCCTTTAGTGGCCGGGACTGTCTTCTTGCTACACTTTCAGTGCTGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCACTGGTGCTTAGCTCAGCATAGGTCACTCCTTTGGGGG--TCTGCTGTCTTTGGAGAAAATAGATGAATA----------TTTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaaattaattacaattaaatttaatttaaaatccaggtcctcggtcacaccagatgcattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583436 378 - 106955855 AAACTTAATTTTATTGATACGGATGAAGAGCAAGGGACACAGAGTCATCTGCATCTCCATGTTTCCGATAGCCTTGGCCAGCACGATCCCC--------CATCCTTTAGTGGCCGGGGCTGTCTTCTTGCTACACTTTCAGTGCTGCATATTCATGAGATCCTGGGGGTTCCCGGGTGGTGT-CGGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCT-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaaattaattacaattaaatttaatttaaaatccaggtcctcggtcacaccagatgcattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875807 373 + 64156825 AAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCCGCATCTCCACGTTTCTGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACTTTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGTcaatatggcagccactagctacacgtggctattgacatttaaattaattac-----aattaaattcaaactccaggtcctcggtcacaccacatgcattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014649 378 + 51301725 aAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCTGCATCTCCACGTTTCTGATAACCTTGGCCAGCATGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACTTTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCCGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGtcaatatggcagccactagctacatgtggctattgacatttaaattaattacaattaaattaaattaaaaatccaggTCCTTGGTCACACcacatgcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46727731 378 + 50890351 AAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCCGCATCTCCACGTTTCTGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACATTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAACTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGTcaatatggcagccactagccacacgtggctattgacatttaaattaattacaattaaattaaattcaaaatccaggtccttggtcacaccacatacatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45299289 382 + 49145316 AAACTTAATTTTATTGATACGAATGAGAAGCAAGGGACAC--GGTCATCCACATCTCCACATTTTCAATGACCTCAGCCGGCACAATACCC--------CCTCCTTCGGTGGCCTGTGTTGTCTTGTTGCTACACTTTCAGTGCCACATATTCGTGAGATCCTGGGGGCTCCAGGGTAGTGT-CAGCAGCTGCCTCAGACAGGGCGTGGGTGCTTAGCTCAGCAGAGGTCACTCC-TTGGGGG--TCTGCGGTCTTTGGGGAAAACACACGAACACAGACACGCATTGAACACTGAG-TGGTcagtatggcaaccactagccacccatggctcttgatgtttaaattaattac-----agttaaatttaaaatccaggtcctcggtcacgcgagatgcattt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19463955 381 - 122678785 aaacttaattttattactatggattATGAACTAAGGACAC--AGTGACCTG-GTTGCCATGTGTCCAGTCATCC---CCAGCATGTTAACCCATGTTCTCCTTCTCCAGGGGTCCG-GCTG--TTCTTCCTTCACCTGCCGCACTGCACATTCACAAGATCCTGGGGACTCCTCGGTGGGGCACAGAAGCTGCCTTAGGTGGTGCCTTGGGGTTTAGATCAGCATGGCTCACTCC-CTGGGGGGTCTTTCAGTCTTTGAGAAAGAGAGACAGGAT-----------TTAGAGCTTAgctgtccaatatggtacctacaacccacatatggctatttacatgtaagcaaattaaaattacatttaatttaaagctcaggtcctcagtcacagcaggtacagtt i canFam3.chr1 I 3674 I 1974 e macFas5.chr19 54882420 20327 + 59248254 M a score=937443.000000 s hg38.chr19_GL949748v2_alt 15584 478 + 1064304 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGCCTGTGACATCAATGGATCTGCGTAAGCCTTTTTTCAttttttttaaatttttatttatttatttattttgggacagagtctggctc-tgtcgcccaggctggagtgcggtggcgtgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggcgcccactaccacgcccagctaattttttgtatctttagtagagatggggtttcaccatgttaaccaggatggtctcgatctcctgacctc--atgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgc--gcccggccC-----------------------------------------ATGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACATGCGTGATAAACAG--TATACATTTCT s panTro4.chr19 58952413 478 + 63644993 cTTTTTCTTTTCTGTTGTTATGACCCTTTATGCCTGTGACATCAATGGATCTGCATAAGCCTTTTTTCATTTTTTAAAAAtttttatttatttatttattttgagacagagtctggctc-tgtcgcccagcctggagtgcggtggcgtgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggcgcccaccaccacgcccagctaattttttgtatctttagtagagatggggtttcactgtgttaaccaggatggtctcgatctcctgacctc--atgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgc--gcccagccC-----------------------------------------ATGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACATGGGTGATAAACAG--TATACATTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55818673 479 + 60714840 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGTCTGTGACATCAATGGATCTGCGTAAGCCTTTTTTCAtttttt-aaaatttttatttatttgtttattttgagacagagtctcgctc-tgttgcccaggctagggtgcagtggcacgatctcagctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggtgcccgccaccacgcccagctaattttttgtatctttagtagagacggggtttcacagtgttaaccaggatggtctcgatttcctgacctt--gtgatccgcccgccttggcctcccaaagtgctgggattacaggcatgagccaccgc--gcccagccC-----------------------------------------GTGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCATGACTTGTCTAAGACCACACAGGTGATAAACAAATAGAACATTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583814 475 - 106955855 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGTCTGTGACATCAATGGATCTCCGTAAGCCTTTTCTCAtttttt-taaatttttatttatgtatttattttgagacagagtctcactc-tgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcccgggttcacaccattctcctggctcagcctcctgagtagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagacagggtttcactgtgttaaccaggatggtctcaatctcctgacctc--gtgatccgcccgcctcggcctcccaaagtgtggggattacaggcgtgagccaccgc--gcccagccC-----------------------------------------GTGCATACGCCTTTTAAATGGAGATTTTGGTTCTCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACACGGGTGATAAAC----TATACATTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876180 464 + 64156825 cTTTTTCTTTTCTGTTTTTATAGCCCTTTATGTGTGTGACATCAATGGATTGGCGTAAGACTTTTATttttttatt----tttatttttattttttta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggttcaagtcattttcctggctcggaat-ccaagcagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgc--acccggccC----------------------------------------GGTGCATATGCCTTTTAAATAGAGATTTTGGTTCCCCTTTGGGGAG---------TTATCTAAGACCACACGGGTGATAAATAG--TAGACGTTTCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015027 469 + 51301725 ctttttcttttctgtttttatagccCTTTATGTGTGTGACATCAATGGATCGGcgtaagacttttatttttttatttttatttatttttatttattta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggtttaagtcaTTTTCCTGGCTCGGaatcccaagcagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgc--acccagccc----------------------------------------cgtGCATATGCCTTTTAAATAGAGATTTTGGTTCCCCTTTGGGGAG---------TTGTCTAAGACCACACAGGTGATAAATAG--TAGACGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728109 469 + 50890351 cTTTTTCTTTTCTGTTTTTATAGCCCTTTATGTGTGTGACATCAATGGATCTGCGTAAGACTTTTAtttttttatttttatttttatttatttatcta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggttcaagtcattttcctggctcggaatcccaagtagctgggattacgggcgcccgccaccacgcccagctaattgtttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaaatgctgggattacaggcgtgagccaccgc--acccggccC----------------------------------------TGTGCATATGCCTTTTAAATCGAGATTTTGGTTCCCCTTTGGGGAG---------TTGTCTAAGACCACACGGGTGATAAATAG--TAGACGTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45299671 463 + 49145316 cTTTTTCTTTTCTGTtttta-------------------------------------------ttatttatttat-----------tttatttatt---tttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacccgcctat---cccggctaatta-ctgtatttttagtagagacgaggcttcaccatgttggccaggctggtcttgaacacctgacctctggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgtgcccggccTCTTTCCTGTTTTTAAACCCTTTATTTGTGACATCAATGGATCTGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCGTTATGAGAGTTTTGTGACTCGTCTACGATCACATGGGTGATAAACAG--TGGACATTTCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19464336 1974 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=191023.000000 s hg38.chr19_GL949748v2_alt 16062 83 + 1064304 GTATGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC s panTro4.chr19 58952891 83 + 63644993 GTATGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GTAACTCCTAAGCGGTAGGACTCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55819152 87 + 60714840 GTACGGTCTTAACCAGGAGGCACACACGACCAATGGGCCGATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i ponAbe2.chr19 C 0 M 2486 s nomLeu3.chr10 102584289 83 - 106955855 GTACGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------AGGACTCCTAAGCGGGAGGACTCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876644 83 + 64156825 GTATGGGCTTAACCAGGAGGCAGACACGACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015496 83 + 51301725 GTATGGGCTTAACCAGGAGGCAGACACGACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGATTCCTAAGCGGGAGGACTCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728578 83 + 50890351 GTATGGGCTTAACCAGGAGGCAGACACAACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45300134 142 + 49145316 GTGTGGGCTTAACCAGCAGACAGACACTACCA----GCCCAGCGTGGTAAGGGAGGGACTCATAGgtagagacaggtttcaccacgttcgtcaggctggtctcgaactcctgtcatggtgaAGGACTCCCAAGCTGGAGGACTCAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466310 69 - 122678785 GTATGGGCTGAACTGGGAGGCAAACAAGGTCA----GCATATGGTGATAAGTGAC-----------------------------------------------------CTTGT--------G------------GGGAGAACTCAT i canFam3.chr1 I 1974 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=153677.000000 s hg38.chr19_GL949748v2_alt 16145 81 + 1064304 CGAGAGAGATACCC-TTTCCATATTGGATAAATCTGCCTCTGAGTGAGAAAG---GAAAAAAAAAAATCAGTTCTCAG-CTGCAGA s panTro4.chr19 58952974 81 + 63644993 CGAGAGAGATACCC-TTTCCATATTGGATAAATCTGCCTCTGAGTGAGAAAG---GAAAAAAAAAAATCAGTTCTCAG-CTGCAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102584372 85 - 106955855 CGAGAGAGATACCCTTTTCCATATTGGATAAATCTGCCTCTGAGTGAGaaagaaaaaaaaaaaaaaaTCAGTTCTCAG-CTGCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876727 82 + 64156825 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTCTGAGTGAGAGAG--AAAAAAAAGAAAATCAGTTTTCAG-CTGTAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015579 82 + 51301725 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTctgagtgagagag--aaaaaaaagaaaatcagttttcaG-CTGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728661 82 + 50890351 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTCTGAGTGAGAGAG--AAAAAAAAGAAAATCAGTTTTCAG-CTGTAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45300276 81 + 49145316 CGAGACATATACCC-TTTCCATCTTGAATAAATCTGTATCTGAGTGAGAGAG---AGAGAAAAAAAATCAGGTCTCAG-CTGCAGA i calJac3.chr22 C 0 I 1135 s canFam3.chr1 19466379 76 - 122678785 -GAGACACGTATCC-TTTCCAGGTTGGATAAATCTGCATGTGAGTAAAAGGG--------GGAAAAATCAGCTCTCAGATTGCAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=175542.000000 s hg38.chr19_GL949748v2_alt 16226 92 + 1064304 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CTTCCCCTGTCCCTTACCGGCAGCCTCCTGCTCCGGAAGTTTGGAATGGCTGG s panTro4.chr19 58953055 92 + 63644993 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CGTCCCCTGTCCCTTACCGGCAGCCTCCTGCTCCGGAAGTTTGGAATGGCTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102584457 92 - 106955855 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CTTCCCCGGTCCCTTACCGGCAGCCTCCTGCTCTGGAAGTTTGGAATGGCTGG i nomLeu3.chr10 C 0 M 550 s rheMac3.chr19 59876809 92 + 64156825 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCACCTGCTCCGAAAGTTTGGAATGGCTGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015661 93 + 51301725 AGTCAGAACTTAAGTCTTTCTATACGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCTCCTGCTCCGAAAGTTTGGAATGGCTga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728743 92 + 50890351 AGTCAGAACTT-AGTCTTTCTATCTGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCTCCTGCTCCGAAAGTTTGGAATGGCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301492 86 + 49145316 agccAGAACTT-AGCCTTTCTGTCTGGTTATTCCCT----------TCCCCTATCCCTTACCAGCAGCCTCTCGTTCTGGAAGTTTGGAATGACTGG i calJac3.chr22 I 1135 C 0 s canFam3.chr1 19466455 95 - 122678785 AGTGAG-ACTT-ATTCTTTCTATCCCGTTGTTCCCCTGTGGTTTCTTCCCTTACCACTCACCTGCAGCCTCCTCCTTGGGAAATTTGGAATGTCTGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=342465.000000 s hg38.chr19_GL949748v2_alt 16318 294 + 1064304 TTCTGAAAGAGAGAGACACACGTG--AAAGGATGGGATGTGAAGATTTCGGGGAGAGGGTGAGGGCAATGGAGGGGAGAGGAAGG--------------------GAGAAGAAGGGAGAGGAGGAAGGTCACAGAATGGGCTGGGGTGGGGGCTCAGGGTGCCAATCCCGGATGTGCCAATGGGTTCCCTTGAGAATGACATGGGAA-TAAGTGGAGCATGAGCTATGCCAAG--CATCTACCTCTTGGTGGATTCCTCA---GATGATGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC s panTro4.chr19 58953147 315 + 63644993 TTCTGAAAGAGAGAGACACACATG--AAAGGATGGGATGTGAAGATTTCGGggagagggtgagggcaatggaggggagaggaagggagaagaggggagaggaagagagaagaggggagaggaggAAGGTCACAGAATGGGCTGGGGTGGGGGCTCAGGGTGCCAATCCCGGATGTGCCAATGGGTTCCCTTGAGAATGACATGGGAACTACGTGGAGCATGAGCTATGCCAAG--CATCTACCTCTTGGTGGATTCTTCA---GATGATGAACCTACAAG------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACGGAG-AAAATCCTTCACTCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59876901 285 + 64156825 TTCTGAGAGAGAGAGAGACACATG--AAAGGATGGGATGTGAAGATTTCGGggagagggtgagggcagtggaggggagaggaggg------------------------------aagtggagggAGGTCACAGAATGGGCTGGGGTGGGAGCTCAGGGTACCAATCCCGAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGTGACGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015754 287 + 51301725 ttctgagagagagagagacacgtGAAAAAGGATGGGATATGAAGATTTCggggagagggtgagggcaatggaggggagaggaggg------------------------------gagtggagggaggtcacagaatgggctggggtgggggctcagggTACCAATCCCAAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGCGACGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCttcactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728835 285 + 50890351 TTCTGAGAGAGAGAGAGACACGTG--AAAGGATGGGATATGAAGATTTCGGggagagggtgagggcaatggaggggagaggaggg------------------------------gagtggagggaggTCACAGAATGGGCTGGGGTCGGGGCTCAGAGTACCAATCCCAAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGCGAAGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301578 269 + 49145316 TTCT--AAGAGAGAGAAACACATG--AAAGGACGGGATGTGAAGACTGGGGGGAGAGGGTGAGGGCTATGGAGGGGAGAGGAGGT--------------------------------------------CACAGGCCGGGCAGGAGTAGGGGCTTAGGGCACCAGTCCTGGATGTGCCAGTGGATTCCCTGGAGAATGACATGGGAATTGGGTGGAGCATACGCTATGCCCAG--CGTGTACCTCTTGGAGGATTCTTCA---GGCGAGGAACCTATAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATGTACCTACTGAG-AAAACGCTTCGCCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466550 329 - 122678785 TTCT--AAGAGACAGAAACACATT--AAAGCATGGGATCTAAAGACT--GGGGAGGATGGCAGGGCTTTGGAGACTAGAGGCATG------------------------------GG----------------------------------------------AATCATAGATGTGCAATCAGGGTCTCTGAGGAAGG-------------GAGAGGCACGAGATACATCAAGTATATCTACCTTTTGGTGGCTTCTTCATGTGATGATGAACCTACAAAACAAAACAAAAAGGGAGGAATTTATATTtaaaaaattttttttaatttaaattcaatttcctgacataaagtataatacccagtgctcatctcatcatgtgccctcAGGGAGAAATTTATCTAATAAGAAAAATCTTTCATTTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e nomLeu3.chr10 102584549 550 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=36324.000000 s hg38.chr19_GL949748v2_alt 16612 17 + 1064304 CCCTCTCTCCCTTTGCG s panTro4.chr19 58953462 17 + 63644993 CCCTCTCTCCCTTTGCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585099 17 - 106955855 CCCTCTCTCCCTTTGCG i nomLeu3.chr10 M 550 C 0 s rheMac3.chr19 59877186 17 + 64156825 CCCTCCCTCCCTTTGCG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47016041 17 + 51301725 ccctctctccctttgcG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729120 17 + 50890351 CCCTCTCTCCCTTTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301847 17 + 49145316 CCCTCTCTCCCTTTGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466879 17 - 122678785 ATCCCCCTTCCCCAGCG i canFam3.chr1 C 0 I 181 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=754002.000000 s hg38.chr19_GL949748v2_alt 16629 367 + 1064304 TTCTCTGAGCTCACTGTGCTGGCTGCATCTGTAGATgatgaagactgagaggaagaggagaaggatggagatgcagctgaagatggcgacaaagatggTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACTGATAGGGGCGAGCCGAAAA--GCTAAGAGAAGCCagacagatggcctggcttccaagcc--tggatctcccacctcggagctggaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac s panTro4.chr19 58953479 367 + 63644993 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGGAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCATGTCAGGGAATCAGCCTGGCTCCTGAAATCCACTGATAGGGGCGAGCCGAAAA--GCTAAGAGAAGCCagacagatggcctggcttccaagcc--tggatctcccaccttggagctggaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585116 367 - 106955855 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGGAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAAATGGTTCTGGTGTCTGGAGAGGGAAGAGCAGGTCAGAGAATCAGCCTGGCTCCTGAAATCCACCGATGGgggtgagctgaaaa--gctaagaggagccagacagacggcctggcttccaagcc--tggatctcccacctcggagctggaatttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59877203 367 + 64156825 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGAAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACCGATAGGGGTGagcagaaaa--gctaagaggagccagacagacggcccggcttccaagcc--tggatctcccaccttggagctgaaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgagtgtagcagcagtacctattttgttggctgg-------------tgggtcagtacctatagagagggctggaac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47016058 366 + 51301725 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGactgagaggaagagaagaaggatggAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGTAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACCGATAGGGGTGAGCAGAAAA--GCTAAGAGGAGCCAGACAGACGGCCCGGCTTCCAAGCC--TGGATCTCCCACCTT-GAGCTGAAACTTCCTATTGCTTTGGGGAATTTCCTTAATCTTCTCCAAgcttctgtttccccatctgtaaagtgaggacaGCAGCAGTACCTATTTTGTTGGCTGG-------------TGGGTCAGTACCTATAGAGAGGGCTGGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729137 367 + 50890351 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAgatgatgaagactgagaggaagagaagaaggatggagatgcagctgaagatgGCAACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGAAATCAGCCTGGCTCCTGAAATCCACCGATAGgggtaagtagaaaa--gctaagaggagccagacagacggcctggcttccaagcc--tggatctcccacctcggagctgaaacttcctattgctttggggaatttccttaatcttctctaagcttctgtttccccatcggtaaagtgaggacagcagcagtacctattttgttggctgg-------------tgggtcagtacctatagagagggctggaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301864 365 + 49145316 CTCTCTGAGCTCACCGTTCTGGCTGCATCTGTAGATGACGATGACTAAGAGGAAGAGGAGAAGGATGGAGACACAGCTGAAGATGCTGACAAAGATGGCTCTGGTGTCTAGAGA-GGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATGCGCTGA-GAGGGTGagcagaaaa--gctaagaggagccagccagacagcctggcttccaagcc--tggatctcccacctcggatctggaacttcctattgctttggggaattaccttaatcttctccaagcttctgtttcctcgtctgtaaagtgagggtagcagcagtagctactgtagtggatgg-------------tgggtcagtacccatagagaaggctggaac i calJac3.chr22 C 0 T 1028 s canFam3.chr1 19467077 365 - 122678785 TTCCCCAAACTCACCATGCTGGGTGCATATGTTGATGAAGAAGATGGAGAGGAAGAGGAGCAAAATGGAAAGGCAGGTGAACGTAGCAGCAAAGATGAATCTGGTGGCTAGTGGGAGAGGAACAGGTAGTAGAATCAGTTTGGTTCCTGAGACACCCTGATCAAGCTTAGCAGACAGGTGCCAAg-------aaccagataacctggtttccaaaactttgcagctgccacttctgagctgtaacttccaattactgc-gggaatttccttca-cctccctgaccttttgtttccctgtt--caaagtgaggacaaaaacagtagctgcTGGACTGGATGGAGCTGGGGTTAACTGGGTGGGTCCTGGCAGAGAGG-------- i canFam3.chr1 I 181 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=108538.000000 s hg38.chr19_GL949748v2_alt 16996 84 + 1064304 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGAtattgatcatttattgtgagccag s panTro4.chr19 58953846 84 + 63644993 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGAtattgatcatttattgtgagccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585483 84 - 106955855 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGATATTGATCATTTATTGTGAGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59877570 75 + 64156825 actgcttggcgcatagg---------aaattcccagggaatgttTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCAG i rheMac3.chr19 C 0 I 1256 s papAnu2.chr19 47016424 74 + 51301725 ACTGCTTGGCGCATAGG---------AAATTCCCAGGGAATGTTTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729504 75 + 50890351 actgcttggcacatagg---------aaattcccagggaatgttTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCAG i chlSab2.chr6 C 0 I 323 s canFam3.chr1 19467442 71 - 122678785 ---GCCTCACACAAGGG---------AAATCCCCAATAAGTGTTTTAGCCATAGTAATAATTCCTATTATttattgtgagctg- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M a score=7377.000000 s hg38.chr19_GL949748v2_alt 17080 26 + 1064304 ctctgttccaggtgctccatatatat s panTro4.chr19 58953930 26 + 63644993 ctctgttccaggtgctccatatatat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585567 21 - 106955855 CTCTGTTCCAGTTGCTCCata----- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016498 10 + 51301725 -----------GTGCTttaca----- i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19467513 26 - 122678785 ccctgtgctaggcgcttcacacatgt i canFam3.chr1 C 0 I 817 e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=83016.000000 s hg38.chr19_GL949748v2_alt 17106 238 + 1064304 ATATACGTGTGTGTGTGTGtatatatatatataaatgtatatatatgtgtgtgtatatataaatgtgtatatatatatatatatatatatatatatatacatatatatatatatataCACACttttttt-tttttgagatggagtcgtgttctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccctggttcaaacaattctcctgactcagcctcctgagta s panTro4.chr19 58953956 221 + 63644993 ata----tgtatgtgtgtatatatatatatataaatgtatatatatgtgcgaatatatataaatgtgtgtatatgtacatatatat--------------atatatatatatataCACACACtttttttctttttgagatggagtcgtgctctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccctggttcaaacaattctcctgactcagcctcccgagta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585588 226 - 106955855 -------tatatgtgtgtatatatatatacacatatataaataaatgtatgtatatatataaatgtatatatatatgtgcgtatatatataaat------gtgtgtatatatatataCACtttttttttttttttgagatggagctgtgctctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccttggttcaaacaattctcctgactcagcctcccgagta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016508 184 + 51301725 -------tacgtgtgtatgtgtgtatat----------------------------------gtgtgtgtgtgtgtgtgtgtgtat--------------atatatatatatatatatatattttttttttttttgagacggagcctcgctctgtcacccaggctggagtgtgatcttggctcactgcaacctccacctctctggttcaaccaattctccccactcagcctcctgagta i papAnu2.chr19 C 0 I 135 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=780.000000 s hg38.chr19_GL949748v2_alt 17344 2 + 1064304 gt s panTro4.chr19 58954177 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585814 2 - 106955855 gt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016827 2 + 51301725 gc i papAnu2.chr19 I 135 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=459091.000000 s hg38.chr19_GL949748v2_alt 17346 408 + 1064304 tgggattacaggcgtgagccaccacatctgtctGTGTAATCACTGTCTGAAATCCACTGAT-GGGGTGAGTAGAAAAGCTAAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGCCTGGAT-CTCCCACCTTGGAGCTGGAACTTCCTTGGAGCTGGacatttcgaccaatagactttgagtaaagcagatgacccactgtcataggggtgggcctcatccaatcagttgaagactttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatcccctgcctgcctgccctgcagatttcagacttgccagctccccacaatcacgtgaaccaatccattaaaatcaatctctctctc s panTro4.chr19 58954179 409 + 63644993 tgggattacaggcatgagccaccacatctgtctGTGTAATCACTGTCTGAAATCCAATGATAGGGGTGAGCAGAAAAGCTAAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGCCTGGAT-CTCCCACCTTGGAGCTGGAACTTCCTCAGAGCTGGacatttcgaccaatagactttgagtaaagcagatgacccactgtcacaggggtgggcctcatccaatcagttgaagactttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatcccctgcctgcctgccctgcagatttcagacttgccagctccccacaatcacgtgaaccaatccattaaaatcaatctctctctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585816 403 - 106955855 tgggattacaggcgtgagccaccacgtctgtctGTGTAATCAGTGTCTGAAATCCACTGATAGGGGTGAGCAGAAAAGCTTAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGTCTGGAT-CTCCTGCCTCGGAA-TGGAACTTCCTTGGAGCTGGacgtttggaccaatagactttgagtaaagcagatgacctactgtcatacgggtgggcctcatcctatcagttgaaggctttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatctcctgcccgcctgccctgcagatttcagacttgccagccccccacaatcacgtgaaccaatccctta-----aatctctctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59878901 380 + 64156825 tgggattacaggtgtgagccaccacgtctgtccGTGTAATCACTGTTTGAAATGCACTGATAGGGGTGAGCAGAACTGCTAAGAGGAGCCAGACAGACAGCCTGGCTTCCAAGCCTGGAT-CTCCCGCCTTGGAG-----------------CTGGacatttcaaccaatagactttgagtaaagcagatgacacactgtcatatgggtgggcctcatccaatcagttgaaggctt--------taagagaaaagactgaggtaccccaaggtggaaggaattcggcctccagactgaggctgcaatatcaagtctcccctggatctcct----gcctgccttgcaggtttcagacttaccagcccccgacaatcacatgaaccaatccattaaaataaatatctctctc i rheMac3.chr19 I 1256 I 436 s papAnu2.chr19 47016829 374 + 51301725 tgggattacaggtgtgagccaccacgtctgtcCGTGTAATCACTGTCTGAAATGCACTGATAGGGGTGAGCAGAAATGCTAAGAGGAGC----CAGACAGCTTGGCTTCCAAGCCTGGAT-CTCCCACCTGGGAG-----------------CTGGACATTTCAACCaatagactttgagtaaagcagatgacccACTGTCatatgggtgggcctcatccaatcagttgaaggctt----------aGAGAAAAGACTGAGGTACCCCAAGGTGGAAGGAATTGGGCCTCCAGACTCAAGCTGCAGTATCAAGTCTCCCTTGGATCTCCT----GCCTGCCCTGCAGATTTCAGACTTACCAGCCCCCGACAATCACATGAACCAATccattaaaataaatctctctctc i papAnu2.chr19 C 0 I 66 s chlSab2.chr6 46729902 377 + 50890351 tgggattacaggtgtgagccaccacgtctgTCTGTGTAATCACTGTCTGAAATGCACTGATAGGGGTGAGCAGAAATGCTAAGAGGAGC----CAGACAGCCTGGCTTCCAAGCCTGGATCCTCCCGCCTTGGAG-----------------CTGGacatttcaaccaatagactttgagtaaagcagatgacccactgtcatatgggtgggcctcatccaatcagttgaaggctt--------taagagaaaagactgaggtaccccaaggtggaaggaattgggcctccagactcaagctgcaatatcaagtctcccttggatctcct----acctgccctgcagatttcagacttaccagcccctgacaatcacatgaaccaatccattaaaataaatctctctcta i chlSab2.chr6 I 323 I 4 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M a score=12058.000000 s hg38.chr19_GL949748v2_alt 17754 28 + 1064304 catatatgtatatacatgtatat----gttc-----t s panTro4.chr19 58954588 33 + 63644993 catataTGTATATACATGTATAT----Gttctttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586219 27 - 106955855 catatatgtatctacatgtgtat----gttc------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017269 37 + 51301725 tatacacacacacacatgtgtatgtgggtttttttgt i papAnu2.chr19 I 66 C 0 s chlSab2.chr6 46730283 37 + 50890351 tatacacacacacacacgtgtatgtgggtttttttgt i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=113125.000000 s hg38.chr19_GL949748v2_alt 17782 97 + 1064304 cttttttttttttgagacaaagtctcactcttatcgtccaggctggagtgcaatagt-gcaatcttggctcactgcaagctccgcctcccgggttcaa s panTro4.chr19 58954621 97 + 63644993 tttttttttttttgagacaaagtctcactcttgtcgtccaggctggagtgcgatagt-gcaatctcggctcactgcaagctccgcctcccgggttcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586246 97 - 106955855 tttttttttttttgagacaaagtctcactcttgtcatccaggctggagtgcaatagt-gcaatcttggctcactgcaagctccgcctcccgggttcaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017306 97 + 51301725 ttgtttgttttttgagacaaagtttcactcttgtcgtccaggctggagtgcaatagc-gcaatcttggctcgctgcaagctctgcctcctgggttcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730320 98 + 50890351 ttgtttgttttttgagacaaagtttcactcttgtcatccaggctggagtgcaatagctgcaatcttggctcgctgcaagctccgcctcctgggttcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301201 97 + 49145316 Ctttctttcttttgagatggagtttcactcttgctgcccaggctggagtgcaatggc-gcgatcccagctcactgcagcctctgcctcctgcgttcaa i calJac3.chr22 T 1028 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=105959.000000 s hg38.chr19_GL949748v2_alt 17879 135 + 1064304 gcaattctcctgccttagcctcctgagtagctgggattacaggtgcccaccatcacgcccggctaatttttgtatttttagtagagacggggtttcgccatgttggccacgctggtcttgaactactgacctcag s nomLeu3.chr10 102586343 135 - 106955855 ggaattctcctgcctcagcttcctgagtaactgggattacaggcacccaccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtcttgaactactgacctcag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017403 135 + 51301725 gcaattctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccacgcccgactgatttttgtatttttagtagagacggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730418 135 + 50890351 gcaattctcctgcctcagcctcctgagtagctgagattacaggtgcccaccaccacgcccgactgatttttgtatttttcgtagagacggggtttcgccatgttgaccaggctggtgttgaactcctgacctcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301298 134 + 49145316 gtgattctcctgcctcagcctcccgagtagctgggatcacaagcacgcgccaccgtgcccagctaa-ttttgtattttcagtagagatggggtttctccatgttggccaggctggtcttgaactcccaaccccac i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I e panTro4.chr19 58954718 0 + 63644993 C a score=94146.000000 s hg38.chr19_GL949748v2_alt 18014 96 + 1064304 gcaatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccagcttatatctatatgttctat-tggttctg-tttttc s panTro4.chr19 58954718 96 + 63644993 gcaatccgcctgccttggcctcccaaagtgctgggattacaggcatgagccaccacacccggcttatatctatatgttctat-tggttctg-tttttc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586478 92 - 106955855 gcaatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccagcttatatctatatgttcta-----ttctg-tttttc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017538 97 + 51301725 gtaatccacccacatcggcctcccaaagtgctaggattacaggcgtgagccaccacacccagtttatatatatatgttctat-tggttctgttttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730553 97 + 50890351 gtaatccacccacgtcggcctcccaaagtgctaggattacaggtgtgaaccaccacacccagcttatatatatatgttctat-tggttctgttttttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301432 97 + 49145316 gtgatccacccacctcagccccccaaagtgctggagttacagacgtgagccactgtacccagccAGAACTTAGCCTTTCTGTCTGGTTATT-CCCTTC i calJac3.chr22 C 0 I 53 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=42161.000000 s hg38.chr19_GL949748v2_alt 18110 55 + 1064304 tggaaaaccctggctaacacaGACATGATCTCAGCTCTTAACTTCAAACATATTT s panTro4.chr19 58954814 55 + 63644993 tggaaaaccctggctaacacagacttgatCTCAGCTCTTAACTTCAAACATATTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586570 55 - 106955855 tggaaaaccctggctaacacaCACATGATCTCAGCTCTTGACTTCAAACGTGTTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017635 50 + 51301725 tGGAAAACCCTGGCTAATAcagacacgatctcagctct-----tcaaacacattt i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46730650 55 + 50890351 tggaaaactctGGCTAACACAGACATGATCTCAGCTCTTAACCTCAAACACAttt i chlSab2.chr6 C 0 I 28 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301529 53 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=7367.000000 s hg38.chr19_GL949748v2_alt 18165 17 + 1064304 CCTTTTTCTTTTTTTAA s panTro4.chr19 58954869 17 + 63644993 CCTTTTTCTTTTTTTAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586625 15 - 106955855 --TTTTTCTTTTTTTAA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017691 17 + 51301725 cttttttttttttttta i papAnu2.chr19 I 6 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301529 53 + 49145316 I e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=6371.000000 s hg38.chr19_GL949748v2_alt 18182 11 + 1064304 AG---GAGAGAGAG s panTro4.chr19 58954886 11 + 63644993 AG---GAGAGAGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586640 14 - 106955855 agagagagagagag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017708 11 + 51301725 aa---gagacagag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45301582 11 + 49145316 AA---GAGAGAGAA i calJac3.chr22 I 53 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=50408.000000 s hg38.chr19_GL949748v2_alt 18193 125 + 1064304 AGATGTGAAAGGACGGGATGTGAAGATTATGGGGAGAGGGTGAGGGCAATggaggggagaggaggggaga----------ggagggAGGTCACA-----------GATGGGAGCTCAGGATGCCAATCCCAGATGTGCCAATgggt s panTro4.chr19 58954897 135 + 63644993 AGACGTGAAAGGATGGGATGTGAAGACTATGGggagagggtgagggcaatggaggggagaggaggggagaagaggggagaggagggAGGTCACA-----------GATGGGAGCTCAGGATGCCAATCCCAGATGTGCCAATgggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586654 136 - 106955855 agagGTGAAAGGATGGGATGTGAAGATTCTGGggagagggtgagggcaatggaggggagaagaggggaga----------ggagggaggtcacagaatgggctgggatgggagCTCAGGGTGCCAATCCCAGATGTGCCAATgggt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45301593 122 + 49145316 ACACATGAAAGGACGGGATGTGAAGACTGGGGGGAGAGGGTGAGGGCTATGGAGGGGAGAGGAGGTCACA-------------GGCCGGGCAGG-----------AGTAGGGGCTTAGGGCACCAGTCCTGGATGTGCCAGTGGAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e papAnu2.chr19 47017719 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=3386.000000 s hg38.chr19_GL949748v2_alt 18318 4 + 1064304 tccc s panTro4.chr19 58955032 4 + 63644993 tccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586790 4 - 106955855 tccc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017719 4 + 51301725 tctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45301715 4 + 49145316 TCCC i calJac3.chr22 C 0 I 2530 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=613.000000 s hg38.chr19_GL949748v2_alt 18322 2 + 1064304 at s panTro4.chr19 58955036 2 + 63644993 ac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586794 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017723 2 + 51301725 ac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=301761.000000 s hg38.chr19_GL949748v2_alt 18324 234 + 1064304 tgttgcccaggctagagtgcagtggtgtgatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagccaacttCAAACACACTTCAATGAGCTCGTTGATGCCAGGTAATGAACAGCAGTGACACGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGACATGATTCCCCAAGA s panTro4.chr19 58955038 234 + 63644993 tgttgcccaggctagagtgcagtggtgtgatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagcCAACTTCAAACACACTTCAATGAGCTCATTGATGCCAGGTAATGAACAGCAGTGACACGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTAGGGCTCTCTGAAGGAGACATGATTCCCCAAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586796 234 - 106955855 tgttgcccaggctggagtgcagtggtgcgatcatactcgaattcctgagctcgagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagcCAACTTCAAACACACTTCAAAGAGCTCGTTGATGCCAGGTAATGAACAGCAGTGACAAGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGACATGATTCCCCAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59879717 234 + 64156825 tgttgcccaggctggagtgcagtggtgcaatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagatcactgcgcccagcCAACTTCAAACACACTCCAATGAGCTCGTTGACGCCAGGTAACGAACAGCAGTGACATGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGATATGATTCTCCGAGA i rheMac3.chr19 I 436 C 0 s papAnu2.chr19 47017725 223 + 51301725 tcttgcccaggctggagtgcagtggtgcaatcatactcgaattcctgggctcaagcggtcctcctcaCTCGGCCTCCAggggtagctgggagtacagatcaccacgcccagccaacttcAAACACACTCCAATGAGCTCGTTGACACCAGGTAACGAACAGCAGTGACATGGGCATGGAAGGCGTTTagagtggggaggggtggggttcTCTGAAGGAGACAC------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730733 234 + 50890351 tgttgcccaggctggagtgcagtggtgcaatcatactcgaattcctggcctcaagcggtcctcctcactcggcctcca-gggtagctgggagtacagatcaccacgcccagcCAACTTCAAACACACTCCAATGAGCTCGTTGACGCCAGGTAACGAACAGCAGTGATGTGGGCATGGAAGGCGTTTAGAGTGGGGAAGGGTGGGGCTCTCTGAAGGAGACATGATTCTCCGAGA i chlSab2.chr6 I 28 I 41 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1746.000000 s hg38.chr19_GL949748v2_alt 18558 3 + 1064304 CAC s panTro4.chr19 58955272 3 + 63644993 CAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587030 3 - 106955855 CAC i nomLeu3.chr10 C 0 I 4 s rheMac3.chr19 59879951 3 + 64156825 CAC i rheMac3.chr19 C 0 I 119 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017948 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=5373.000000 s hg38.chr19_GL949748v2_alt 18561 13 + 1064304 AGAACAAGGGATC s panTro4.chr19 58955275 13 + 63644993 AGAACAAGGGTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587037 13 - 106955855 ACGACAAGGGATC i nomLeu3.chr10 I 4 C 0 s papAnu2.chr19 47017948 13 + 51301725 AGAACGAGGGATC i papAnu2.chr19 C 0 I 22 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=15005.000000 s hg38.chr19_GL949748v2_alt 18574 55 + 1064304 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGGGTTAGAGCAGGGTAGA s panTro4.chr19 58955288 55 + 63644993 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGGGTTAGACCAGGGTAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587050 55 - 106955855 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGAGTTAGACCAGGGTAGA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=7272.000000 s hg38.chr19_GL949748v2_alt 18629 14 + 1064304 AAAGAATGACCAGT s panTro4.chr19 58955343 14 + 63644993 AAAGAATGACCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55821738 14 + 60714840 AAAGAATGTCCAGT i ponAbe2.chr19 M 2486 C 0 s nomLeu3.chr10 102587105 14 - 106955855 AAAGAATGACCAGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=639731.000000 s hg38.chr19_GL949748v2_alt 18643 895 + 1064304 ggccgggcac-ggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctactgaaaatataaaaaataagctgggcatggtggcgcacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcatcactgcatcatacactcaactgaccaagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTaaaaaacaaaaac-------------------aaaacaaaacaaaaaaaacTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcatagcgttttaaagtcttaacaacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAGCAAGGGTTGTGTCCAAAGCTCACAGCGTTGAGGAAGAGAGAGCAACCTGTTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCCCGTTT--------------TTTGTTTTTCTTGGCACTTTAGATTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGTAGCAGAAACGTGATTAAGGA-AAAAAGTTGAGCAACTATAGAAGTGAGGCCCCAGAAAGGGGCTTCACCAAGACCCCCGCTATCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCACATTACAGAGCCAAGTCTGAGATGCTTCACACGCCTGGTCCTCTGCACCAACAGAGGGTCTCCCATCCAGACGCTTCCCCTACTTGGTTC----GCTATGTT-----TGCATTGGCATTt s panTro4.chr19 58955357 893 + 63644993 ggccgggcgt-ggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaaataagctgggcatggtggcgcatgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggagggggaggttgcagtgagccgagatcgcatcactgcatcatacactcgactgaccaagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTAAaaaacaaaaac-------------------aaaacaaaacaaaacaaaCTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcatagcgttttaaagtctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGGGTTGTGTCCAAAGCTCACAGCGTTGAGGAAGAGAGAGCAACCTGTTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCC-GTTT--------------TTTGTTATTCTTGGCACTTTAGATTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGCAGCAGAAACGTGATTAAGGA-AAAAAGTTGAGCAACTATAGAAGTGAGGCCCCAGAGAGGGGCTTCACCAAGACCCCCGCTATCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCACATTACAGAGCCAAGTCTGAGATGCTTTACACACCTGGTCCTCTGCACCAACAGAGGGTCTCCCATCCAGACGCTTCCCCTACTTGGTTC----GCTATGTT-----TGCGTTGGCATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55821752 913 + 60714840 ggccgggcgcgggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcaagagcagcctggccaacatggtaaaaccctgtctctactaaaaatataaaaaataagctgggcatggtggtgcacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcatcattgcatcatacactcgacagactgagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTAaaagacaaaaacaaaaaattaaacaaa----aaaacaaaacaaaa-aAactagttcttgagcaatactgccaggcaagtctacatcacagcattttaaattctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagaGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGGGTTGCGTCCAAAGCTCACAGCGTTGAGGAAGAGCGAGCAACCTGTTACTAAAGCTAGGTGACAGAGTCCATGCAGTTTCCCCC-GTTT--------------TTTGTTTTTCTTGGCACTTCAGAGTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGTAGCAGAAACATGATTAAGGA-AAAAAGTGGAGCCACTAAAGAAGTGAAGCCCCTCTCTGGGGCTTCACCAAGACCCCCACTATCTTTATTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGCTCTGTAGTCACATTACAGAGCCAAGTCTGCGATGCTTCACACGCCTGGTCCTCTGCACCAACAGAAGGTCTCCCATCCAGACCCTTCCCCTACTTGGTTC----ACTGAGAGAGAAATGCGTCGGCATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102587119 855 - 106955855 ggccgggcgc-ggtggctcatgcctgtagtcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctacgaaaaatataaaaaataagctgggcatggtggcacacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagattgcaccactgcatcatacactcgactgaccgagaccccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTaaaaaacaaaaacaaaaaatcaaacaaaaaacaaaacaaaacaaaa-aaaCTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcagagcgttttaaattctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGCGTTGCGTGCAAAGCTCACAGCGTTGAGGAAGAGCGAGCAACCTGGTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCA-GTTT--------------TTTGTTCTTCTTGGCACTTTAGAGTCAAGAAACACAAGTCATGAGACTTTAAGGAGTAAGTAGCAGAAACATGATT-------------------------------------------------------------CCGCTGTCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCGCATTACAGAGCCAAGTCTGAGATGCTTCACATGCCTGGTCCTCTGCACCAACAGAGGGTCTCCCGTCCAGACCCTTCACCTACTTGGTTCACTGACTATGTT-----TGCGTTGGCATTT i nomLeu3.chr10 C 0 I 318 s calJac3.chr22 45304249 872 + 49145316 ggctgggcgc-ggtggctcacacttgtaatcccagcactttgggaggccgaggcgggtggat--cctgaggtcaacagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgcgggcctgtaatcccagctactcgggaggctgaagcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcaccattgc----------------------actccagcctgggtaa----------caagagtgaaactgtgtctcaaaagcaaagc-aaaac-------------------aaaacaaaacaaaaaaaaCGAGTGCTTGAGCAATATCGCCATGTAAGTCTACGTCGtagcgtgttaaattctta-caacaaccctgcaaggtagcaccattattcccatcccactggtgaagGGCACACGTTCCCATGTAACTCCCGGGATTATGACAAGGGTTCCTTCCAAAGCTCACAGCGTTGAGGGAGAGTGAGCAGCCTGTTAGTAAGTCTGGGTGACGGAGTCCATGCAATTCCCCtg-tttttgtttttgtttttgtttttttttCTTGGCACGTGAGGTTCAGGAAACACACGTCATGAGACTTTAAGGAGTAAGTAGCAGAAACATGATCGAACACAAAAAGGTGAGCAACTTCGGAAGTGAAGCCCCAGAGCGGGGCCTCACCAAGACCCTCACTGTGTTTGTTAGTGTGCTTGGAGGCTGAGAATGCTTCCTGGGTGTGCGATGACCTGTGGCCACATCGCAGAGCCGCGTCTGAGATGC-TCACACGCCTGGTCCTCTGCACCAACAGA--GCTTCCCATCCA-ACCCTTC-CCTACTTGGTTCCCTCGCTGTGCT-----TGCGTCGGCATTT i calJac3.chr22 I 2530 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=156268.000000 s hg38.chr19_GL949748v2_alt 19538 259 + 1064304 ctacatatctatatatagagaattacctatctaatttatctatctcgctaatctatctaccatctgtctaggtatctattatctatctacctatctatctttatctgtctctgtacctacttacctatcatctatccaatctatc-cgtcctatctaattatgatttatctatctacctacttgcctatcacctatccaatctatctatcctatcatatgtaattaactatctgtctgtcta---atttttctatcttgttaa s panTro4.chr19 58956250 259 + 63644993 CTACATATCTATATATAGAGAATTACctatctaatttatctatctcgctaatctatctaccatctatctaggtatctattatctatctacctatctatctttatctgtctctgtacctacttacctatcatctatccaatctatc-cgtcctatctaattatgacttatctatctacctacttgcctatcacctatccaatctatctatcCTATCATATGTAATTAACTATCTGTCTGTCTA---ATTTTTCTATCTTGTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55822665 258 + 60714840 CTACATGTCTATATAGAGTGAATTACCTATCTAATTTATCTATCTCGCTAATCTATCTACCAtctatctaggtatctattatctatctacctatcta----tatctgtttctctacttacttacctatcatctgtccaatctatc-cgtcctatctaattatcacttatctatctacctagttgcctatcacctatccgatctatctatcctatcatatgtaattaactatctatctgtctgtctaATTTTCTATCTTGTTAA i ponAbe2.chr19 C 0 I 359 s nomLeu3.chr10 102588292 242 - 106955855 CTACATGTCTATATATAGAGAATtacctatctaatttatctatctcgctaatctatctaccatctatctaggtatctattatctatctacctatctatctttatctgtttctctacctacttacctatcatctatccaatctatc-tgtcctatctaattatcacttatctatctacctacttgcctatcacctatccaatctatcc---------tatgtaattaa--------ctgtcta---atttttctatcttgttaa i nomLeu3.chr10 I 318 C 0 s calJac3.chr22 45305121 181 + 49145316 CTACAGACCTATGCAGGGAGAAGTACCTGCCTAATTTATCTGTCTCACTCAtctgtc----------------------catctgtctgcctagctatctttatctgtctctctacctacttacctatcatctatccaatctatcttgtcacatctaattatc---tatctatctttcta------------------------------------------------------tctgtgta---attttcctgtcttgctaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=24832.000000 s hg38.chr19_GL949748v2_alt 19797 58 + 1064304 tctatcacttatctaggcatctatgtatctatctttatctgtctatccacctgcttac s panTro4.chr19 58956509 58 + 63644993 TCTATCACTTATCTAGGCAtctatgtatctatctttatctgtctatccacctgcttac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102588534 58 - 106955855 tctatcgcttatctaggcatctatgtatctatctttatctgtctattcacctacttac i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45305302 48 + 49145316 tctatcacctatctagacatcta----------tctatctgtctatccacctaattac i calJac3.chr22 C 0 I 1392 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55822923 359 + 60714840 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=69663.000000 s hg38.chr19_GL949748v2_alt 19855 195 + 1064304 ctgctgtctgtctaatctatccatcctatcatatctaattatc-----acttatctatc-------taccgacttacctatcatctagttaccaaatctatcatctatctaatgtatctatcaatcataaccagttatctatcatct----atcatctatcatctgtatgtatctgtctattcacctactattatctatttaatctattct-- s panTro4.chr19 58956567 199 + 63644993 ctgttgtctatctaatctatccatcctatcatatctaattatc-----acttatctatc-------taccgacttacctatcatctagctaccaaatctatcatctatctaatgtatctatcaatcataaccagttatctatcatctctctatcatctatcatctgtatgtatctgtctattcacctactattatctatttaatctactct-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102588592 199 - 106955855 ctgtcgtctgtctaatctatccatcctatcatatctaattatc-----acttatctatc-------tactgacttacctatcatctagctaccaaatctatcagctatctaatgtatctgtcaatcataactagttatctatcatctctctatcatctatcatctgtatgtatctgtctattcacctactataatctatttaatctatcct-- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45306742 193 + 49145316 ctatcatctatctaatgtatctatcc-attgtacctaattatccaattgatcatctatcttatctatatcaagttatctatcatctatct----aatctatcatctatctaatgtatctatcCATTGTACCTAATTATCCA--AGTG----ATCatctatc--ttatctatatcaagttat-------ctatcatctatctaatctatcatct i calJac3.chr22 I 1392 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55822923 359 + 60714840 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=124117.000000 s hg38.chr19_GL949748v2_alt 20050 220 + 1064304 atctagt-tatctatctatctatccacc----------------tacttatctaat---ttttctatcttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatctgtgtatctgtatatctatctatctatctagctagctttatctagctacctagttacctatcatctatctatctaatctatcatctatctaatgtatctatcaatcatatctaattatctgtctatctaatc s panTro4.chr19 58956766 220 + 63644993 atctagt-tatctatctatctatctacc----------------tacttatctaat---ttttctatcttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatccgtgtatctgtatatctatctatctatctagctagctttatctagctacctagttacctatcatctatctatctaatctatcatctatctaatgtatctatcaatcatatctaattatctgtctatctaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823282 213 + 60714840 atctagt-tatctatctatgtatctacc--------------------tatctaat---ttttctatctTG-------CAA---CTCTTATCACctatctaggtatcta-----tgtatctatccatgtatctgtatatctagctagctagctagctagcttgattgagctacctagttacctatc----atctatctaatctatcatctatctaatgtatctaccaatcatatctaattatctgtctatctaatc i ponAbe2.chr19 I 359 C 0 s nomLeu3.chr10 102588791 227 - 106955855 atctagt-tatctatctatctatctatctatctatctatctatctacctatctaat---ttttctattttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatccatgtatctgtatgt----ctatctatctagctagctttatctagctacctacttacctatc----atctatataatctatcatctatctaatgtatctatcaatcatatctaattttctatcta-atcatc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45306935 223 + 49145316 atctaatgtatctatcaat---tgtacc----------------taattatccaattgatcatctatcttatctatatcaagttatc-tatcatctatcta---atctatcatctgtatctaccta-----ctgaggat-catctatctaatctatcatctgtatctatctacctactcacctatcatctgtctacctaatctatcatctatctaatgtatctatccattgtacctaattatccaattg----atc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=169802.000000 s hg38.chr19_GL949748v2_alt 20270 146 + 1064304 atctatcttatctattatatctagttatctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcgtctatttatctatctaatct---atcatatctagttatctatctacttact-------tatcta----acctgttg s panTro4.chr19 58956986 150 + 63644993 atctatcttatctattatatctagttacctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcatctatttatctatctaatct---atcatatctagttatctatctacttact-------tatctatctaacctgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823495 138 + 60714840 atctatcttttctattatctctagttatctatcatctagctag--------------------------------ctagctaatctatctg---------------gatctacctacttacctatcatctatttatctatctaatct---atcatatctagttatctatc----tatc-------tatcta----acctattg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589018 146 - 106955855 atctaccttatctattatatctagttatctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcatctatt----tatctaatct---atcatatccagttatctatctagttact-------tatctatctaacctattg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017983 128 + 51301725 atctattttatctactatatctagttatctatcatctagctag--------------------------------ctagctaatc-atctg-----------tatctatctacctacttacctattatccatttatctatctaacct---atcatatctagttatctatctattg---------------------------- i papAnu2.chr19 I 22 C 0 s chlSab2.chr6 46731008 124 + 50890351 atctattttatctactatatctagttatctatcatctagctag--------------------------------ctagctaatc-atctg-----------tatctatctacctacttacctattatccatttatctatctaacct---atcatatctagttatctattg-------------------------------- i chlSab2.chr6 I 41 C 0 s calJac3.chr22 45307158 196 + 49145316 atctatcttatc---tatatcaagttatctatcatctatctaatctatcatctgtatctacctaCTGACGATCATCTGTCTAATCTATCTGCCAtatctagttatctgtctacctacttgcctattacctatt----tatctagtctgtcatcatatgtagttatgtatctacctaccgtctatgtctctatctaatctattg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=627254.000000 s hg38.chr19_GL949748v2_alt 20416 336 + 1064304 tatctagttatctatctacctacttacctatcatctgtctatctatctaatctgtccatcg-tatctagctacttatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatctgcctacttgcctat----tatctatcacatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggggagtttgaaacaagacatatttgagttctagtactgggtctcctacctcctgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa s panTro4.chr19 58957136 336 + 63644993 tatctagttatctatctacctacttacctatcatctgtctatctatctaatctgtccatca-tatctagctacttatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatcttcctatttacctat----tatctatcacatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggggagtttgaaacaagacatacttgagttctagtactgggtctcctacctcctgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823633 332 + 60714840 tatctagttatctatctacctacttacctatca----tctatctatctaatctgtctatca-tatctagctactgatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatctacctacttacctat----tatctatcatatttaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGAGAgcagcaaaaggagtggagagtttgaaacaagacatacttgagttctagtactgggtctcctacctcccgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589164 280 - 106955855 tatctagttatctatctacctgc-----------------------------------------------------ttaacctatcatc------tgtctatctaatctatcatatctagttatctatttatctacctacttacctat----tatctatcatatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggagagtttgaaacaagacatacttgagttctagtactgggtctcctacctcctgactttgtgaatgttcccttccctttctggaatacgttattttttggttaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880073 332 + 64156825 tatctatttatctatctacctacttacctatcacctgtctc----tctaatccatctatca-tatctagctacctac----ctatcatcta--tgtatctatcttatctatcatgtctagttgtctatgtatctacctacttacctatcatctgtctatcatatctaattatctatttat-cCCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGATCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACAAACTTGAGTTCTAGTAGTAGGTCTCCCATCTCCTGACTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i rheMac3.chr19 I 119 I 417 s papAnu2.chr19 47018111 340 + 51301725 tatctaattatctatctacctacttaactatcatctgtctctctatctaatccgtctatcattatctagctacctacctagctatcatcta---gtatctatcttatctatcatgtctagttatctatttatctacctacttacctatcatctgtctatcatatctaattatctatttat-ctCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGATCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACATACTTGAGTTCTAGTAGTAGGTCTCCCATCTCCCGACTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731132 324 + 50890351 tatctaat----tatctacctacttaactatcatctgtcta----tctaa----tctatca-tatctagctacctac----ctatcatcta---gtatctatcttatctatcatgtctagttatctatgtatctacctacttacctatcatctgtctatcatatctaattatctatttatcCCCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGCTCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACATACTTGAGTTCTAGTACTAGGTCTCCCATCTCCCATCTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307354 305 + 49145316 tatcta---------ctacctgcttctct--------cctatttatctaa----tctatca-tatctagctatctac----ctaccatctatctacatctatctaATGTATCATATCGAGTTACCTA--------CCTACTCACCTGTCATCTGTCTATCATATCTAAGTATCTGT-----CTCCCTCCCTGAAATAAGGCTCTGTCTGAGCAGACCATCAGCcagcggcaaaaggagtggattctttgtaacaacgcacgcttgggttctagtactgagtctcccacctgccgactctgtaaatgttcccttccctttctggaatacgttattctttggttaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=10192.000000 s hg38.chr19_GL949748v2_alt 20752 4 + 1064304 atat s panTro4.chr19 58957472 4 + 63644993 atat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823965 4 + 60714840 atat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589444 4 - 106955855 atat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880822 4 + 64156825 ATAT i rheMac3.chr19 I 417 C 0 s papAnu2.chr19 47018451 4 + 51301725 ATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731456 4 + 50890351 ATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307659 4 + 49145316 atat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1354260.000000 s hg38.chr19_GL949748v2_alt 20756 514 + 1064304 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcgctcagtctagaaactgactcattgtGTCGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCTACACCCATCTCTCTCTGTAATAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAACTCCAAATGCCTTGGAATTTA--CATGCCCGGGACAAACTGCCAC--TGACGGCTGT--------------GGGGACCCCAGCTCC-CTAGCCTCT---------GGTCTTCGACCTTCTCTGTCTCCACTGC--TTTCTGCAGGATGGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACACTTGTTTAATCTATTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT s panTro4.chr19 58957476 514 + 63644993 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGATATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAACTCCAAACGCCTTGGAATTTA--CATGCCCGGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------AGTCTTTGACCTTCTCTGTCTCCACTGC--TTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACACTCGTTTAATCTATTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823969 515 + 60714840 aaaga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGTGCTCCAAATGCCTTTGAATTTA--CATGCCCGGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCTCTGTCTCCACTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACCCTTGTTTAATCTCTTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589448 514 - 106955855 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGGTATAATGATGA-TTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCTATGTTCCCCAGATCCCTTTCCCACTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCAGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-ATAGCCTCT---------GGTCTTTGACCTTCTGTGTCTCCACTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACCCTTGTTTAATCTCTTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880826 511 + 64156825 AAGGA-GGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACGTCCA----TCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCGGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCGGAACAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCT---------GGTGTTTGACCTTCCCTGTCTCCGCTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACTCTTGTTTAATCTCTTTTCCTCCCGGCCCTTCTTCCCC---ACT-CCCTAAAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018455 516 + 51301725 AAGGAGGGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGtataatgatgattttttttcaccCAATATTCCACCCACGCCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTgtggcttctttccctttccaaAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCGGAACAAACTGCCAC--TGACTGCTGT--------------CAAAACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCCCTGTCTCCACTGC-TTTTCTGTAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACCCTTGTTTAATCTCTTTTCCTCCTGGCCCTTCTTCCCC---ACT-Ccctaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731460 516 + 50890351 AAGGA-GGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAGTGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCAGAACAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCCCTGTCTCCACTGCTTTTTCTGCAGGATTGAGCCAAAGATACCATCTTGGGGACACGGATATCCCACTCTTGTTTAATCTCTTTTCCTCCCGGCCCTTCTTCCCC---ACT-CCCTAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307663 516 + 49145316 aagga-ggaggcagagagctaataatatctaacttgaggagttaggtaatgatgaaaaatcctggctttcaagcactcagtctagaaactgactcactgtGTAGGATAATGGGATTGTAGGTATAATGATGA---TTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAGTGTTCCTCAACCCATGTTCCCCAGATCCCTTTACCATTTTTATGCATTCTAGATCGAGGCTTCTTTCCCTTTCCAAAGTGAACACTTAGGTCTCTTCTTTGA------GCCAGGGAGGACTCAAAATGCCTTGGAATGTA--TATTCCCTG-CCAAACTGCCAC--TGCCTGCTGTTTGCAGGGAAATAGAAAGACCACAGCTCC-----CCTCC---------CGTCTTTGACCTTCTCTGTCTCCACTGC-TTTTCTGCAGAATTGGGCCAAATATACCATCTGAGGGACATGAATATCCCACCCGTGTTTAATTTCTTTTCCTCCCAGGCCTTCTTCCCC---ACTCCCCTAAAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19468356 518 - 122678785 AAGGA-CAGGG--GCGGGATGAGAATCCCTAACTTGAAGAGCTGGGTAATGATGGAAGGCACTGGCTTCAAAGCACAGAGCCT-GGATCTGACTCATGATGTAGGATAATGAGATTGCGGTGATAACGATTA--TTCTCTCTCCCGATATCCCACCCACACCTGTCTCCCTCTGTAACAGACGATGCCAGTGCTCCACACTGCTTG---CCCAGATCCCTTTGCCATTTTAATGCGCTCTGGATCATGGTTTATTTCACCTTCCAATGCGGACACTTGCTTCTCTT-TGTGGGGGACTGCCAGGAAGGACCCAAAATGCCTCGGGATCTATGTATTCCAGGGACATCTCTTTACCATGACTGCCATTTGTGGAAGCAT--GAATGCCCTAGTTCTGTTGGTCACCAGTTGCCAGGGTGTGTGACCTTCTATGTCTCCTCCAC-TTTCC--CAGCTCCATGCAAAAGATGCGGT-GGAGGGATG-------------ATTGCTCAGTC-CTTTACTTCTCAGCCCTCTTTCCCCTGTACC-CCCTACAAT i canFam3.chr1 I 817 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=19977.000000 s hg38.chr19_GL949748v2_alt 21270 10 + 1064304 GTAATTTTCA s panTro4.chr19 58957990 10 + 63644993 GTAATTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824484 10 + 60714840 GTAATTTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589962 10 - 106955855 GTAATTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59881337 10 + 64156825 GTCATTTTCA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018971 10 + 51301725 gtcattttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731976 10 + 50890351 GTCATTTTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19468874 10 - 122678785 GTTACATTCA i canFam3.chr1 C 0 I 49 e calJac3.chr22 45308179 0 + 49145316 C e macFas5.chr19 54882420 20327 + 59248254 M a score=374368.000000 s hg38.chr19_GL949748v2_alt 21280 216 + 1064304 Agccaggcgtggtggctcacacctgtaatcccagcactttgggaggtcgaggcaggcagagcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatagaatattagctgggtgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaatctcttgaacctggtaggcgga s panTro4.chr19 58958000 216 + 63644993 Agccaggcgtggtggctcacacctgtaatcccagcactttgggaggtcgaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaataaaatattagctgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaatctcttgaacctggtaggcgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824494 216 + 60714840 agccaggcatggtggctcacgcctataatctcagcgctttgggaggtcgaggcgggcagatcacctgagctcaggagtttgagaccagcctgaccaacatgtagagactccacctctactaaaaatacaatattagctgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaaccccgtaggcaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589972 216 - 106955855 Agccaggcacggtggctcacgcctgtaatcccagtactttggaaggtcgaggcgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaatattagccgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaacccggtaggcgga i nomLeu3.chr10 C 0 M 1381 s rheMac3.chr19 59881347 216 + 64156825 Cgccgggcgtggtggctcactcctgtaatctcagcactgtgggaggccaaggtgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacacagagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018981 216 + 51301725 cgccgggcatggtggctcactcctataatctcagcactgtgggaggccaaggtgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtagtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731986 216 + 50890351 Cgccgggcgcggtggctcacacctgtaatctcagcactgtgggaggccgaggtgggcggatcacctgagatcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e calJac3.chr22 45308179 0 + 49145316 C e macFas5.chr19 54882420 20327 + 59248254 M a score=117536.000000 s hg38.chr19_GL949748v2_alt 21496 97 + 1064304 ggttgc-agtgagccaagatcacgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaactaaataaataat-aaataaaataaaaC s panTro4.chr19 58958216 97 + 63644993 ggttgc-agtgagccaagatcacgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaactaaataaataat-aaataaaataaaaC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824710 97 + 60714840 ggttgc-agtgagccgagatcatgccattgcactccagcctgagcaacaagagcaaaactctgtctcaaaactaaataaataat-aaatgaaataaaaC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59881563 98 + 64156825 ggttgc-agtgagccaagatcatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaataaaAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019197 99 + 51301725 ggttgcaaatgagccaagatcatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaataaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732202 94 + 50890351 ggttgc-agtgagccaagaccatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaaTA---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e calJac3.chr22 45308179 0 + 49145316 C e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=15472.000000 s hg38.chr19_GL949748v2_alt 21593 17 + 1064304 GTCAC----------TTTCACACTAAT s panTro4.chr19 58958313 17 + 63644993 GTCAC----------TTTCACACTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824807 17 + 60714840 GTCACNNNNNNNNNNtt---------- i ponAbe2.chr19 C 0 I 4 s rheMac3.chr19 59881661 17 + 64156825 GTCAC----------TTTCACACTAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019296 17 + 51301725 atcac----------tttcACACTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732296 16 + 50890351 -TCAC----------TTTTACACTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308179 17 + 49145316 GTCAC----------TTTTGCACGAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=69553.000000 s hg38.chr19_GL949748v2_alt 21610 58 + 1064304 GCTGTCTAAGAGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAAAAGCAACAA s panTro4.chr19 58958330 58 + 63644993 GCTGTCTAAGAGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAAAAGCAACAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59881678 58 + 64156825 GCTTTCTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGGACCCCTCAAAAGCAACAA i rheMac3.chr19 C 0 I 8 s papAnu2.chr19 47019313 58 + 51301725 GCTTTTTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAaaagcaacaa i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 46732312 58 + 50890351 GCTTTCTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGAATCCCTCAAAAGCAACAA i chlSab2.chr6 C 0 I 8 s calJac3.chr22 45308196 54 + 49145316 ----GCTAAGAGCCTGCTTTTGGTGGAGCTGGATCTGAGAACACCTCAAGGGCAACAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e ponAbe2.chr19 55824824 4 + 60714840 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=71081.000000 s hg38.chr19_GL949748v2_alt 21668 52 + 1064304 -ttttttt---tttttt----gagaca--gtctcactctgtctcccaggctggagtgcagtg s panTro4.chr19 58958388 49 + 63644993 -ttttttt---ttttttt---gagaca--atctc----tgtctcccaggctggagtgcagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824828 52 + 60714840 -ttttttt---tttttt----gagaca--gtctcactctgtctcccaggctggagtgcagtg i ponAbe2.chr19 I 4 C 0 s rheMac3.chr19 59881744 54 + 64156825 -ttttttt---tttttt----gagacagagtcttactctgtcaccctggctggagtgcagtg i rheMac3.chr19 I 8 C 0 s papAnu2.chr19 47019379 58 + 51301725 -ttttttt---tttttttttggagacagtgtcttactctgtcaccctggctggagtgcagtg i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 46732378 61 + 50890351 -tttttttttattttttttttgagatagagtctcactctgtcaccctggctggagtgtagtg i chlSab2.chr6 I 8 C 0 s calJac3.chr22 45308250 58 + 49145316 ttcttttttaatttttt----gaaacagagtctcactctgtcgcccaggctggagtgcagtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=24930.000000 s hg38.chr19_GL949748v2_alt 21720 13 + 1064304 gtacaatctcggc s panTro4.chr19 58958437 13 + 63644993 gtacaatctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824880 13 + 60714840 gtacaatctcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591569 13 - 106955855 GTAcaatctcagg i nomLeu3.chr10 M 1381 C 0 s rheMac3.chr19 59881798 13 + 64156825 gctcaatcttggc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019437 13 + 51301725 gctcaatcttggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732439 13 + 50890351 gctcaatcttggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308308 13 + 49145316 gtgcaatctcggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=365110.000000 s hg38.chr19_GL949748v2_alt 21733 222 + 1064304 --tttggaacctccccctctggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcacccgccacctcaccccgctaattttttatatttctagtagagatgaggtttcaccatgttggttaggctggtctcaaactccagagctcaagtgttctgcccactttggcctcccaaagtgctgggatta----cataagccaccatgcctggc s panTro4.chr19 58958450 221 + 63644993 --tttggaacctccacctctggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcgcccgccacctcaccccgctaattttttatatttctagtagagatgaggtttcaccatgttggttaggctggtctcaaattccagagctcaagtgttctgccc-ctttggcctcccaaagtgctgggatta----cataagccaccatgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824893 222 + 60714840 --tttgcaacctccgcctccggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcgcccgccacctcgccccgctatttttttatatttctagtagagatgaggtttcaccatgttggctaggctggtctcaaactccagagctcaagtgttctgcccaccttggcctcccaaagtgctgggatta----catgagccaccatgcacggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591582 222 - 106955855 --tttgcaacctccacgtccggggttcaagcaattctcctccctcagcctcccaaggagctgggattacaagcgcccgccacctcaccctgctaattttttatatttctagtagagatgaggtttcaccatgttgcctaggctggtctcaaactccagagctcaagtgttctgcccacctttgcctcccaaagtgctgggatta----catgagccaccatgcccggc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47019450 225 + 51301725 --tttgcaatctccgcctccggggttcaggcaattctcctgcctcagcctcccaaggagctgggattacaggtgcccaccaccacgctctgctaattttttatatttctagtagagatgaggtttcaccatgttggccaggctggtctcgaactcctgagctcaggtgatc-gcccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732452 225 + 50890351 --tttgcaatctctgcctccagggttcaagcaattctcctgcctcagtctcccaaggagctgggattagaggtgcccgccaccatgccctgctaattttttatatttctagtagagatgaggtttcaccatgttggccgggctggtctcgaactcctgagctcaggtgatc-gcccaccttggcctcccaaagtgctgggattataggcatgagccaccgcgcctggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308321 228 + 49145316 tcactacaacctccacctcctgggttcaagagattctcctgcctcagcctcccaaggagctgggattacatgtacctgccagcacaccctgctgatttttcatatttttagtagagacaaggtttcaccatgttggccaggctggtctcaaactcttgggctcaagtgatctgcccaccttggcctcccaaagtgctaggattacaggcacgagccactgcgcccagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=818858.000000 s hg38.chr19_GL949748v2_alt 21955 429 + 1064304 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACGGTATCTTTCACACAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTCATCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACAGATCCTGGCC-AAATGTTGCATCAGTATTTGCAAATTGCCAGAATAAATCATAACTTGCTACGC-------TACTAAAGTCAGCGTGAGCAACAAGATACAGCCTGACACGGGGCATAAATGGAGGCACAGGCACCAGAAAGAAAGTCAAGTCTTGTGTGATAAAATTCATCTTCATTC s panTro4.chr19 58958671 429 + 63644993 cATAAGCAAGAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACACAGCAATTCACTAGAAGTGAGAAGTACATTATTGCAAAA--TTCTCATCTTCGTATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACAGATCCTGGCC-AAATTTCGCATCAGTATTTGCAAATTGCCAGAATAAATCATAACTTGCTACGC-------TACTAAAGTCAGCATGAGCAACAAGATACAGCCTGACACAGGGCATAAATGGAGGCACAGGCACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825115 429 + 60714840 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCACATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAAGTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTCGTCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCGCATCAGTATTTGAAAATTGCCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGCCTGAGCAACAAGATACATCCTGACACGGGGCATAAATGCGGCCACAGGCACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591804 428 - 106955855 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGGAACAGCAGCGTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTTGTCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCGCATCAGTATTTGCAAATTGCCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGACTGAGCAACAACATACAGCCTGACAC-GGGCATAAATGGAGCCACAGACACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47019675 432 + 51301725 cataagcAACAATTCTATCAGTGCATTTCCAAGGACTGATGAAAACAGGTCAGGAACAGCTGCTCCTGGACTCTTCTGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTCATCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCATGCAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTGGTCTTCACATGACCCCCATAATCAGCTGGACTGGGTTCACCCTGAGATGTCCACATATCCTGGCCAAAATTTCACATCAGTATTTACAAATTGTCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGACCGAGCAACAAGATACAGCCTGACACGGGGCACAAATGGAGCCACAGGCACCAGAAAGAAAGTCGAGTCTTGTGTGATAAAATTCATCTTCATTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732677 431 + 50890351 cATAAGCAACAATTCTATCAGTGCATTTCCAAGGACTGATGAAAACCGGGCAGGAACGGCTGCTCCTGGACTCTTCCGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTCATCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAATTCACTAGAAATGAGAAGTACGTTATTGCAAAA--TTCTCATCTTCCCATGACCCCCATAATCAGCTGGACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCACATCAGTATTTACAAATTGCCAGAATAAATTGTAAGTTGCTATGC-------TACTAGAATCAGACTGAGCAACAAGATACAGCCTGACACGGGGCACAAATGGAGCCACAGGCACCAGAAAGGAAGTCGAGTCTTGTGTGATAAAATTCATCTTCATTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308549 407 + 49145316 AAAAAGAAACAATTCTATCAGTGCATCTCCAAGGACTTATGAATCCAGGGCAGGCACAGCTGCTCCTGGATCC-TTGGGTTCCCCAGATGGAAGCAGAGAAGCAGCAGCCTTGCCTTGTCCCTTCAGTTC---------------------ATTTTTCAAGCAACACTTTGCTCGAAATGAGAAGTACATTATTGTAAAA--TTCTCGTCTTCATATGA-CCCCATAACCAGCTGAATTGGGTTCCCCCCAAGATGTCCACATATCCCGGCC-AAATTTCACATCACTATTTACAAATTGCCAGAATACATTATAAATTACTATAT-------TGCTGGAATCAGACTGAACAACGGGATACAGCCTGAC-TGGGACATAAATGAAGCCACAGGCACCAGAAAGAAAGCCGGGTCTTGTGTGATAAAATTCATCTTCATTC i calJac3.chr22 C 0 I 327 s canFam3.chr1 19468933 385 - 122678785 CAAAAGCAGCAA-ACTCTCTGCACATCTCCAGGGACATAAGGAAACAGGATGGAAGCAGCTGTTCCCAGACTA-GTAGGACCCTCAATGGGAAGCAGAGAAACATCAGCC------------------TCTGGCTTCTTCC-----ACAGTGACTC----------ACTCACTAGAAATGAGAAGTAGACTATTACAAGACTTTTCCGCTTTCATACGG-CCCCATAACCTGCTGATCTGAGTTCACCCTGAGATGTCCACATTTCCTGGCC-AAATTTCATATCACTCCTTACAAACTGCCAGAGTAAATTACAAAGTCTCAGGTGTTGATGTAAAGGAATCAGGCTGAGCAGTGGGACACAGCTTGACACGGGGTGTAAATGAAGTCACCGTCACCAGAGAGGAGGCCTGGCCTTGTGTG------------------- i canFam3.chr1 I 49 C 0 e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=158849.000000 s hg38.chr19_GL949748v2_alt 22384 110 + 1064304 TCTACATTGCGATTGAACATAGAGTCGTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATCATACCTGTGCTTACAGATAtt-ttacttttattttattta s panTro4.chr19 58959100 105 + 63644993 TCTACATTGCGATTGAACATAGAGTCGTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATCATACCTGTGCTTACAGATAtt-ttacttttattt-----a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825544 110 + 60714840 TCTACATAGCGATTGAACATAGGGTCCTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttacttttattttattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592232 110 - 106955855 TCTACCTAGCGATTGAACATAGGGTCCTTTTCTGGTGTGTTTGAGGCATATACATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttacttttattttatttc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47020107 106 + 51301725 TCTACAGAGCAATTGAATATAGGGTCCTTTTCTGGTGTGTTCAAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTtaaagatatt-ttacttttattt----ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733108 106 + 50890351 TCTACAGAGCAATTGAATATAGGGTCCTTTTCTGGTGTGTTTAAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttactgttattt----ta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309283 91 + 49145316 TCTACATAGCAGTTGAATATAGGGTCCTTTTCTTGTGTGTTTGAGGTATATAAATACAGGATGGGGACGTTATACCTGTGCTTAAAGATAt-------------------- i calJac3.chr22 I 327 C 0 s canFam3.chr1 19469318 64 - 122678785 -----------------CATGG---------------------AGACATCCGGATATGGGCCTGGGACATCATATCTGGGCTGAAAGACTTTATTCCGTTCA--------- i canFam3.chr1 C 0 I 25 e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=230459.000000 s hg38.chr19_GL949748v2_alt 22494 133 + 1064304 tttactgaaacagggtctcgctctgtcacccaggctggagtgctgtggcgcaatcacagttcactg-aagcctcaacctcctgggcgcaaacgatctttctgcctgagcctcccaagtagctgggactacaggt s panTro4.chr19 58959205 133 + 63644993 tttactgagatagggtctcgctttgtcacccaggctggagtgctgtggtgcaatcacagttcactg-aagcctcaacctcctgggtgcaaacggtcttcctgcctgagcctcccaagtagctgggactacaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825654 133 + 60714840 tttactgagacagggtctcgctctgtcacccaggctggagtgctgtggcgcaatcacggttcactg-aagcctcaacctcctgggctcaaatgatcttcctgcctgagcctcccaagtagctgggactacaggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592342 133 - 106955855 tttactgagacagggtctcgctctgtcacccaggctggagtgctgtggcacaatcacagtttactg-aagcctcaacctcctgggctcaaacgatcttcctgcctgagcctcccaagcagctgggactgcaggt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47020213 133 + 51301725 tttattgagacagggtctcgctctgtcactcaggctggagtgctgtgacacaatcacagttcactg-aagcctcaacctcctgggctcaaatggtcttcctgcctgagcctcccaagcagctgggactaaaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733214 133 + 50890351 tttattgagacagggtctcgctctgtcactcaggctggagtgctgtggcacaatcacagttcactg-aagcctcaacctcgtgggctcaaacgatcttcctgcctaagcctcccaagtagctgggactaaaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309374 129 + 49145316 -----tgaaacaaggtctcaccctgtcacccaggctggagtgcagtggtgcaatcacagctcactgaaagcctcaaactcctgggctcaaatgatcttcctgcctcagcctcccaagcagctgggactacaggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19469382 25 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=478268.000000 s hg38.chr19_GL949748v2_alt 22627 200 + 1064304 gcacaccaccacgcctggctaatttttgtattttttgtagagatgggatcttaccaagttgtccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctggtattacagacgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC s panTro4.chr19 58959338 198 + 63644993 gcacaccaccacgcctggctaatttttgtattttttgtagagatgggatctcaccaggttgtccaggctagtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctggtatta--gacgtgagccactgcgccgggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825787 200 + 60714840 gcacactaccatgcctggctaatttttgtattttttgtagagatgggatctcaccaggttgcccaggctggtcttgaacccctgggcacaagtgatcctcctgcctcatcttcccaaagtcctgggattacagatgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAAtagtgatgatacaaatttgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592475 200 - 106955855 gcacaccaccatgcctggctaatttttgtattttttgtagagatgggatctcacccagttgcccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctgggattacagacgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59881811 200 + 64156825 gcacaccaccatgcctggctaatttttgtattttttgtagagatgggatctcactaggttgccctggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcctgaagtcctgggattacagacgtgagccactgcacccggcAAAGATATTTTATTCTGTTTAGAATTGTGGTGATACAAATTTGAAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020346 200 + 51301725 gcacaccaccatgcctggctaattttggtattttttgtagagatggggtctcaccaggttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgcctcatcttcccgaagtcctgggattacagacgtgagccactgcacccggcaaagatattttattctgtttggaaTTGTGATGATACAAATTtgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733347 200 + 50890351 gcacaccaccatgcctggctaatttttgtattttttatagagatgggatctcactgggttgccctggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcctgaagtcctgggattacagacgtgagccactgcacctggcAAAGAAATTTCATTCTGTTTAGAATTGTGGTGATACAAATTTGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309503 200 + 49145316 ccacaccagcatgcctggccaatttttgtgttttttgtagagatgggatcttaccaggttgcccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccacagtcctgggattacagacatgagccattgtgcccagccGAGATATTTTATTCTGTTTAGGATTGTGATGATACAAATTTGAAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19469382 25 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=920567.000000 s hg38.chr19_GL949748v2_alt 22827 323 + 1064304 TCAAAAAGTACATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatactcaagataatttacagcgcggagacaaacagatactcctaccacagtgttcc-agcaccattactcgctttagccaagaggtgcagacaacacaaatgt s panTro4.chr19 58959536 323 + 63644993 TCAAAAAGTACATTTTAAGAAATTATATA-atacccactggaatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattgtaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcgcggagacaaacagatactcctaccacagtgttcc-agcaccattactcactttagccaagaggtgcagacaacacaaatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825987 323 + 60714840 tcaaaaaatacattttaagaaattatata-atacccactgggatggctataattt-aaaaaaggaaaagtaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagctcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcacggagacaaacagatactcctaccacagtgttcc-agcaccattactcactttagctaagaggtacagacaacacaaatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592675 323 - 106955855 TCAAAAAATACATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacgtatattactggaaggaa----gataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagtggggaggcaaacagatactcctaccactgtgttcc-agcaccattattcactttagccaagaggtgcagacaacacaaatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882011 323 + 64156825 TCAAAAAATAAATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatagattactggaaggaa----tataacatgagacagccataatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcagggaggcaaacagatactcctaccacaatgttca-agcaccattactcactttagccaagaggtgcagacaacacaaatgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020546 323 + 51301725 tcaaaaaataaattttaagaaattatata-atACCCACTGggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatatTGGAACCCACATAGATTACTGGAAGGAA----TATAACATGATACAGCCATAATGG-AAAAtgatttggcagttcctcaaaaagttgaaCATAATAGTCACCATATGTCCTAGCAAATCCACTTCTAGGTACATACCCAAGATAATTTACAGCAGGGAGGCAAACAGATACTCCTACCACAGTGTTCA-AGCACCATTACTCACTTTAGCCAAGAGGTGCagacaacacaaatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733547 323 + 50890351 TCAAAAAATAAATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatagattactggaaggaa----tataacatgatacagccataatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcagggaggcaaacagatactcccaccacagtgttca-agcaccattactcactttagccaagaggtacagacaacacaaatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309703 326 + 49145316 TCAaaaactacatttaaagaaattatgta-atacccactgggatggctatcatttaaaaaaaagaaaaggaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaatgactataacatgatacagccacaatgg-aagacgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaattccacttctaggtacatacccaagataatttaaagcggggaggcaaacagatactcctgcca--gtgttca-agcaccattactcactgtagccaagaggtacagagaacacaaatgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19469407 325 - 122678785 TCAGAAAGTACATCTTCAGAAATTATATAcacacccactaggatgtctataataa-aataaaagggaaataagtgttggcaaggacgtggagatattggaaccctcatgtattactggtgggaa----tgtaaaatgttggggccacattggaaaaacaatttggcagtttctcaaaaagttaaacatag-agttaccatatgtctcagcaattctacttctaggtagatatccaagaaaactggaagcagggactcaaacaggtacttgcacactgatgctcagagcactattacttgccctacctgaaaggtatgaacactctagatgt i canFam3.chr1 I 25 I 12 e macFas5.chr19 54882420 20327 + 59248254 M a score=878187.000000 s hg38.chr19_GL949748v2_alt 23150 438 + 1064304 ccatcaaaagaagaacggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcgcctgtaggtccagctactcaggaggttaaggcaaaagaatcacttaaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaacaa-----aaacaaaaacaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacattgatgcatgctacagtacagacaaactttgaaaacattatg s panTro4.chr19 58959859 443 + 63644993 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcgcctgtaggtccagctactcaggaggctgaggcaaaagaatcacttaaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactctgtctcaaaaaaaaaacaaaaaaacaaaaacaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacaatgcttttcaccatgacaagaaattaaacattgatgcatgctacagtacggacaaactttgaaaacattatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826310 449 + 60714840 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagccgaggcaggtggatcacctgaggtcaggagttcaagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcacctgtagttccagctactcaggaggctgagacagaagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaacaaaagaaaaaaacaaagaaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacattgatgcatgctacagtacggataaactttgaaaacattatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592998 430 - 106955855 ccatcaaaggaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaactccctctctactaaaaatacacaaattagctgggcatggtgacgggtgcctgtagttccagctactcaggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgcagtgagttgagattgtgccactgcactccagcctgggcaacagagcaagactccatctcaaaaaaaaaa-------------aaaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacactgatgcatgctacagtacggataaacttcgaaaacattatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882334 425 + 64156825 ccatcaaaagaagaatgaggccaggcgcagtagctcaagtctgtaatcccagcactttgggaagccaaggcaagtggatcacttgaggtcaggagtttgagaccagtctgaccaacatggtgaaaccccttctctact-aaaatacaaaaattagttgggcatggtggcgggcgcctgtagttccagctactcaggaggatgaggcagaagaatcatttgaacctaggaggcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagcaagactccatctcaaagaaaaaa----------------aaaa------ag-gaatggataagcaa------aatgtggtctgtccatacagtatgatgcttttcaccatgacaagaaatgaaacattgatacatgctatagtatggataaactttgaaaacatcacg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020869 328 + 51301725 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcaagtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccttctctactaaaaatacaaaaattagttgggcatggtggcgggcgcctgtagtcccagctactcaagaggatgaggcagaagaatcccttgaacctgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaa----------------aaaa------aa---------------------------------------------------------------------------------------------------------gaaaacatcatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733870 427 + 50890351 ccatcaaaagaagaatggggccaggcgcagtagctcaagtctgtaatcccagcactttgggaagccgaggcaagtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccttctctactaaaaatacaaaaatgagttgggcatggtggcgggcgcctgtagttccaactactcaggaggatgaggcagaagaatcacttgaacccgggaggcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagcaagactccatctcaaagaaaaaa----------------aaaa------aaagaatggataagcaa------aatgtggtctgtccatacagtatgatgcttttcaccatgacaagaaatgaaacattgatacatgctatagtacggataaactttgaaaacatcatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310029 431 + 49145316 ccatcaaaaaaagaatggggccaggtgcggtag--cacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgcggtcaagagttcaagaccagcctggccaacatggggaaaccccgtctctactaa--------aaattagccaggcatggtggcgcatgcctgtacttccagctactcaggaggctgaggcaggagaacagcctgaatctgggaggaagaggttgcagtgggccgagatcgtgccactgcactgcagcctgagccacagagcaagacttcatctcaaaaaagaaa--------aaaaaaaaaaaa------aaggaatgaataagcaaatgtggaatgtggtctatccatacaatgagatgcttttcaccatgacaggaaatgaaacattgatacatgctacagtacagataaactttgaaagcattatg i calJac3.chr22 C 0 I 288 e canFam3.chr1 19469732 12 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=280190.000000 s hg38.chr19_GL949748v2_alt 23588 130 + 1064304 ctaaagagaaagga----------gct--agtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacaaaatcatagacacagagaagcatatgaatggttggaagggcctggtgggaaagtg s panTro4.chr19 58960302 130 + 63644993 ctaaagagaaagga----------gct--agtcacaaaggatcgcatagtgtatgaatccacttacacaaaatgttcagaatagacaaaatcatagacacagagaagcatatgaatggttggaagggcctggtgggaaagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826759 142 + 60714840 ctaaagagaaatgctaaacattatgctaaagtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacaaaattatagacacaaagaagcctatgaatggttggaagggcctgatgggaaagtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593428 130 - 106955855 ctaaagagaaagga----------act--agtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacgaaatcatagacacaaagaggcatatgaatggttggaagggcctggtgggaaagtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882759 130 + 64156825 ctaaagtgaaagga----------ggt--agtcacaaaggaccacatagtatatgaatccatttacacaaaatgtccagaatagacgaaatcatagacacaaagaagcatatgaatggttggcagggcctggtgggagagtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021197 129 + 51301725 cTAAAGTGAAAGGA----------GCT--AGTCACAAAGGACCACATAGTATATTAATCCA-CGacacaaaatgtccagaatagacaaaatcATAGACACAAAGAAGCATATGAATGGttggcagggcctggtgggagagtG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734297 125 + 50890351 ctaaagtgaaagga----------gct--agtcacaaaggaccac-----atatgaatccacttacacaaaatgtccagaatagacgaaatcatagacacaaagaagtatatgaatggttggcagggcctggtgggagagtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310748 130 + 49145316 ctaaagcaaaaaga----------gct--agtcagaaagaatcatgtagtgaatgaatccacttacacaaaatgtccagaatagatgaaaccatagacacaaagaagcatattaatggttggcagggtctggcgggagagtg i calJac3.chr22 I 288 C 0 e canFam3.chr1 19469732 12 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=809384.000000 s hg38.chr19_GL949748v2_alt 23718 307 + 1064304 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcatgaagatacaaaatgccagtgaattggacac---tttacaagggtgaatttttggactgtgaattatatatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCGTTTCTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT s panTro4.chr19 58960432 307 + 63644993 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcattaacatacaaaatgccagtgaattggacac---tttacgagggtgaatttttggactgtgaattatacatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTTGTTTTTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826901 306 + 60714840 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatgattatactacct-atgaatatacgaaatgccagtgaattgtatac---tttacaagggtgaatttttggaacgtgaattatatatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CTTCAAACC-TCACTAGATCTCCCACCTTGTTTCTGATACTTCTATGCTCCTCTCTCC-CGTTAGA-TTTCATATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593558 310 - 106955855 ggaaatgaggaatgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcatgaatatacaaaatgccagtgaattgtatac---tttacaagggtgaatttttggagtgtgaatAATATATTaatagaaaaagaaagaaaataaatgatacaagagctcagaatagaaaagCTTCTCTTCCTCCTCCT--CCTAACACCTTCACTAGATCTCCCACCTTGTTTCTGACACTTCTGTGTTCCTCTCTCCTTGTTAGATTTTCCTATCTTT i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 59882889 307 + 64156825 ggaaatgaggagtgactgctt---aatgggtacaagattttctttcagggtgatgagaatggtctggaattatgtagtggtgatggttatactaccttgtgaatatacaaaatgccagtgaattgcacac---tttacaagggtgaatttttggaatgtgaattatatatcaataaaAAAAGAAGGAAAATAAATGACACAAGAGCTCAAAATAGAAAAGTTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCCTTTCTGATACTTGTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021326 307 + 51301725 GGAAATGaagagtgactgctt---aatgggtacaagATTTTCTTTCAGGGTGATGAGAATGGTCTGGAATTAtgtagtggtgatggttatactACCTTGTGAATATACAAAATGCCAGTGAATTGCACAC---TTCACAAGGGTGAATTTTTGGAatgtgaattatatatcaataaaaaaagaaggaaaataaatgacacaAGAGCTCAAAATAGAAaagtttctcttcctcctccc--cctcacaCC-TCACTAGATCTCCCACCTCCTTTCTGATACTTCTGTATTCCTCTCTCC-CGTTAGA-TTTCACATCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734422 300 + 50890351 ggaaat---gagtgactgctt---aatgggtacaagattttctttcagggtgatgagaatggtctggaattatgtagtggtgatggttatactaccttgtgaatatacaaaatgccagtgaattgtacac---tttacaagggtgaatttttggaatgcgaattatatatcaataaaAAAA----GAAAATAAATGACACAAGAACTCAAAATAGAAAAGTTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCCTTTCTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310878 309 + 49145316 ggaaatggggagtgactgcttctcagtgggtacaagatttcattttagggtgatgaggatgttctggaattatgtggtggtgatggttatactacctcgtgaatatccg-aatgctagtgaattgtacac---tttacaagggtgaatttttggaatgtgaattatatatccataaaAAAAGAAAGAAAACAAAAGATACAAGAGCTCAAAATAGAAAAACTTCTCTTTCTCCTCCC--TCTTACACC-TCACTAGATCTCCCTCCTTATTTCTGATAATTCCATGTTTCTCTCTTC-TGTTAGA-CTTCGTGTCTTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19469744 310 - 122678785 gggaatggggagaaactactt---acagggtaggagatttcatttgggggtgataaaagtgttctggaattacatagtggtgacagttgcataaacttgtt-atatactaaatgccactgaattgtacacttatttaaaagggtaaatttatggaatgtgaattatgagtcaata-aaAAAGAAAGAAAATAAATAATGCAAGAGCTAAAAACATGAATGCACTTCTTCCTCTTCCCTGTCTCACACA-GCACTAGACTTCCTGCCTTATTTCAGATACGTCCATGCTCCTTGACTC-TGTCAGA-TTTCAGGTCTCT i canFam3.chr1 I 12 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=426973.000000 s hg38.chr19_GL949748v2_alt 24025 212 + 1064304 CTCAGAAAACGTTCCTGACGTGAATTGTGTTCGTAGTGCTAGGGTAGCAGACATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTGAAAACCGATTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT s panTro4.chr19 58960739 212 + 63644993 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCGTAGTGCTAGGGTAGCAGACATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827207 212 + 60714840 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCATAGTGCTGGGGTAGCAGTCATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAG-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTAAAAACCGGTTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59883196 211 + 64156825 CTTAGAAAACATTCCTGACGTG-ATTGTGTTCACAGTCCTAGGGTAGCAGTCATTTCCCAAGCCTAGTATCATGGAATAAAAACATTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAAGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021633 212 + 51301725 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCACAGTCCTAGGGTAGCAGTCATTTCCCAAGCCTACTATCAtggaataaaaacatttcaaa-------tagttATCTTGCAAGAACACTTCGGAGGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734722 212 + 50890351 CTTAGAAAACGTTCCTGATGTGAATTGTGTTCACAGTGCTAGGGTAGCAGTCATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAAATTTGGCTCTTCGGAGTAGGTTGCAGGAAGATTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45311187 194 + 49145316 CTTAGAAAATGTTCCTGGCATGAATTGTGTTCATAGTGCTA-GGTAGTAGTCACTTTCCAAACCTACTATCATGGAATAAAAACGTTTCAAG-------TAG-----------------TTTGGAGGATACCTTTTTAAAACCCAATTATACCAGCACAGACTGCTAACAGCAACCTTCAGCAACTTCGGCTCTTTGGAGTAGGTTGTAGGAACATTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470054 201 - 122678785 CCAAGAAAACATTCCTGGTGTGAATTATGTTCATAAAGGTGAAGTAGAAATCATTTCCCAAGTCTGCTAATACTGAATAAAAACATTTTCAAAGGCTATTACTTATTTTGCAAGGACATTTTGGGAGATACCTTTGAAAAAA------------------ACTGGTTATGACAGCCTTGAACAATTTTGGCTCTTTGGAGTGGATTACAGGGAGGTTAT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102593868 100 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=331149.000000 s hg38.chr19_GL949748v2_alt 24237 114 + 1064304 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGTTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC s panTro4.chr19 58960951 114 + 63644993 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827419 114 + 60714840 GACCTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593972 112 - 106955855 GACTTGCTGAAAGGAAGGATGA-TAAGCATCTAGATGCCAATTTATATTCTGCATTTGG-CCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCAAATGCTGCCAAAAGCTCTAAC i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 59883407 114 + 64156825 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021845 114 + 51301725 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCCGAATGCTGCCAAAAgctctaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734934 114 + 50890351 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCTGAATGCTGCCAAAAGCTCTAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45311381 114 + 49145316 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGGCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATACTGCCGAAATCCTTAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470255 114 - 122678785 GAGTTGCAGAAATTAAGGATGAGTAAGCAACTAGATGCCAACTTATGTTATATATTTGGCCATTAAAATCTGGATGAGCTCCCATTTTCATCCAAAGATGCCAAAAGCTCTAAA i canFam3.chr1 C 0 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=37319.000000 s hg38.chr19_GL949748v2_alt 24351 31 + 1064304 -tttttaatttttttttttttttttttttttt s panTro4.chr19 58961065 26 + 63644993 -ttttt-----ttatttatttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827533 26 + 60714840 -ttttt-----ttaatttttttttttcttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594084 26 - 106955855 -ttttt-----ttaatttttttttttcttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883521 27 + 64156825 tttttt-----ttaattttttttttttttttt i rheMac3.chr19 C 0 I 132 s papAnu2.chr19 47021959 27 + 51301725 tttttt-----ttaattttttttttttttttt i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46735048 22 + 50890351 -----T-----TTAAttttttttttttttttt i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45311495 23 + 49145316 -TTAAA-----AAAAtttttttttttttt--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M a score=193738.000000 s hg38.chr19_GL949748v2_alt 24382 151 + 1064304 g-----gagacagagtctcactctgttgcccaggctggagggcagtggtgtaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccacaatgcccagcaaat s panTro4.chr19 58961091 151 + 63644993 g-----gagacagagtctcactctgttgcccaggctggagggcagtggtgtaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccataatgcccagcaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827559 151 + 60714840 g-----gagacagagtctcactctgttgcccaggctggagtgcagtggtataatctcgactcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccacaatgcctggcaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594110 151 - 106955855 g-----gagacagagtctcactctgttgcccagactggagtgcagtggtgtaatctcagctcactgaaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcacccaccacaatgcccggcaaag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47021993 121 + 51301725 -tttttgagacagagtctca----------------------------------ctcggctcactgcaacctctacctcccaggttcaagcaattctcctgcttcagtcacttgagtagctgggagtacaggcgcccaccacaatgcctggcaaat i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 46735076 116 + 50890351 ------gagacagagtctta----------------------------------ctcggctggctgcaacctctacctcccaggttcaagcaattctcctgcttcagtcacttgagtagctaggaatacaggcgcccaccacaatgcctggcaaat i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45311518 132 + 49145316 -------agagacaatctcactctgttgcccaggctggagggcagtggtgccatctcagctcactgcaacctccacctcccagattca---aattctcctgcctcagcctcctgagtagctgggattacag----------taatggct---aaa- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59883548 132 + 64156825 I a score=276355.000000 s hg38.chr19_GL949748v2_alt 24533 127 + 1064304 ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtttcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacagatgtgagccacctcgcc s panTro4.chr19 58961242 127 + 63644993 ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtttcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccacctcgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827710 127 + 60714840 ttttgtatttttagtagagacagggtttcaccatcttgcccaggctggtctcgaactcctgacctcaggtgatccacccacctcagccgcccaaagtgctgggattacaggcgtgagccacctcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594261 98 - 106955855 ttttgtatttttagtagagac-----------------------------tcgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggaatacaggtgtgagccacctcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883680 127 + 64156825 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattataggcgtgagccaccgcacc i rheMac3.chr19 I 132 C 0 s papAnu2.chr19 47022114 127 + 51301725 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggttatctgcccacctcggcctcccaaagtgctgggattataggcgtgagccacctcacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46735192 127 + 50890351 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccacctcgcc i chlSab2.chr6 C 0 I 352 s calJac3.chr22 45311650 127 + 49145316 ttttgaatgtttagtagagatggggtttcaccatgttgaccaggctcgtctcaaactcctgacctcaagtgatccgcccgccttggcctccaaaagtgctgggattacacgcgtgagccactgcgcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M a score=23961.000000 s hg38.chr19_GL949748v2_alt 24660 18 + 1064304 tggccCAAAAGCTCTAAT s panTro4.chr19 58961369 18 + 63644993 tggccCAAAAGCTCTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827837 18 + 60714840 tggccCCAAAGCTCTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594359 18 - 106955855 tggccCAAAAGCTCTAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883807 14 + 64156825 ----TCGGGAGCTCTAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022241 14 + 51301725 ----tcgGGAGCTCTAAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45311777 18 + 49145316 cggccCAAAAGCTCTAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=90187.000000 s hg38.chr19_GL949748v2_alt 24678 40 + 1064304 TTTTATGAGAAACTCTGAGGACAGAATCTTAGTCAATTGT s panTro4.chr19 58961387 40 + 63644993 TTTTATGAGAAACTCTGAGGACAGAATCTTAGTCAATTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827855 40 + 60714840 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594377 40 - 106955855 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883821 40 + 64156825 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022255 40 + 51301725 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45311795 40 + 49145316 TTTTATGACAACCTCTGAGGACAGAGTCTTAGTCAAttgt i calJac3.chr22 C 0 I 299 s canFam3.chr1 19470369 40 - 122678785 TTTTACAAGCATCTCCCAGGATAGAATCTTAGTCAATTCC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=77243.000000 s hg38.chr19_GL949748v2_alt 24718 43 + 1064304 TAATGAATAAGCAACATTA-GAAAAA-AAATTCAATATTCACCTA s panTro4.chr19 58961427 43 + 63644993 TAATGAATAAGCAACATTA-GAAAAA-AAACTCAATTTTCACCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827895 44 + 60714840 TAATGAATAATCAACATTAGGAAAAA-AAATTCAATATTCACCTA i ponAbe2.chr19 C 0 I 35 s nomLeu3.chr10 102594417 44 - 106955855 TAATGAATAAGCAACATTAGGGGAAA-AAATTCAATATTCACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883861 44 + 64156825 TAATGAATAAGCAACATTAGGGGGAA-AAATTCAATATTCACCTA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022295 44 + 51301725 TAATGAATAAGCAATATTAGGGGAAA-AAATTCAATATTCACCTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312134 45 + 49145316 TAATGAATAAGCAACATCAGGAAAAATGCATTCAATATTCACCCT i calJac3.chr22 I 299 I 1 s canFam3.chr1 19470409 44 - 122678785 TCATTGAAAAGCAACACCAGAGAAAA-TAACTTAATATTCACCAG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=18731.000000 s hg38.chr19_GL949748v2_alt 24761 13 + 1064304 TTTTTGAGAATTT s panTro4.chr19 58961470 13 + 63644993 TTTTTGAGAATTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594461 13 - 106955855 TGTTTGAGAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883905 13 + 64156825 TGGTTGAGAATTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022339 13 + 51301725 TGGTTGAGAATTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312180 13 + 49145316 TTTTTGAGAATTT i calJac3.chr22 I 1 I 422 s canFam3.chr1 19470453 13 - 122678785 TTTTTTAGAACTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=12195.000000 s hg38.chr19_GL949748v2_alt 24774 10 + 1064304 TAGAGTTATA s panTro4.chr19 58961483 10 + 63644993 TAGAGTTATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594474 10 - 106955855 TAGAGTTATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883918 10 + 64156825 TAGAGTTATA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022352 10 + 51301725 TAGAGTTATA i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19470466 10 - 122678785 TAAAGTTTTA i canFam3.chr1 C 0 I 1 e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=910.000000 s hg38.chr19_GL949748v2_alt 24784 1 + 1064304 A s panTro4.chr19 58961493 1 + 63644993 A i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594484 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883928 1 + 64156825 A i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022362 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19470476 1 - 122678785 I e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=196807.000000 s hg38.chr19_GL949748v2_alt 24785 193 + 1064304 CAAACTCTTGATTATATATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACTGAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCATGTCATATGGCAAACAACGCACTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCGGAAGCACTTT s panTro4.chr19 58961494 193 + 63644993 CAAACTCTTGATTATATATATTCCCGAAGTACCTACTCTGCATAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACTGAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCATGTCATATGGCAAACAACGCACTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCGGAAGCACTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594485 194 - 106955855 CAAACTCTTGATTATACATATTCCCAAAGTAGCTACTCTGCGTAGGTCCCC------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAATTTTTCATCATGTCATATGGCAAACAACGCCCTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCAGAAGCACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883929 191 + 64156825 CAAACTCTTGATTATACATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCACGTAATATGGCAAACAACGCACTC--TGCTGTTTTACACACCAACTTCTTCAGAAACTGGAAGCACTTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022363 193 + 51301725 CAAACTCTTGATTATACATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCACGTAATATGGCAAACGATGCACTCTGTGCTGTTTTACACGCCAACTTCTTCAGAAACCGGAAGCACTTG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19470477 194 - 122678785 CACATTCTTGATCAGACACATTCCCAAAGCACCTGGGCTCCATGGCT-CCTCCATGGGGT----CTGCCCAAACCAGACAAC-ACAATCTCATCCCCATTCTTCACAAAACTCCACCATCGTTTTTCATTATGTAAAATGATAAATGACGCATCTGTAGCTGTTTTACTCATCAGCTTTTCCTGAACCCAGGAGGAGCTT i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=26254.000000 s hg38.chr19_GL949748v2_alt 24978 28 + 1064304 AGAGGTTATCTCCCCTCATCCTCCACCC s panTro4.chr19 58961687 28 + 63644993 AGAGGTTATCTCCCCTCATCCTCCACCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594679 28 - 106955855 AGAGGTTATCTCCCCTCATCCCCCACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884120 28 + 64156825 AGAGGTTATCTCCCCTCATGCCCCACCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022556 28 + 51301725 AGAGGTTATCTCCCCTCATGCCCTACCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312615 20 + 49145316 agaaGTTACCTCCC--------CAACCC i calJac3.chr22 I 422 C 0 s canFam3.chr1 19470671 12 - 122678785 AGCGGTCATCTG---------------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=90076.000000 s hg38.chr19_GL949748v2_alt 25006 46 + 1064304 CCCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCTTT s panTro4.chr19 58961715 46 + 63644993 CGCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827974 46 + 60714840 CCCAAAACCCAGCAGTTTCCCCAATAACATTGAGAAAATGGGCATT i ponAbe2.chr19 I 35 C 0 s nomLeu3.chr10 102594707 45 - 106955855 -TCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884148 46 + 64156825 CCGAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGCCATT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022584 44 + 51301725 CCGAAA--ACAGCAGTTTCCCCAATAACATTGAGAAAATGGCCATT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312635 46 + 49145316 CCCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAGTGGGCATT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470683 46 - 122678785 CCAGAAAGGCAGTCATTCTCCCAATCACATTGAAAAAACAGGCATC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=241347.000000 s hg38.chr19_GL949748v2_alt 25052 137 + 1064304 AAAG---TTCTTCTAggccgggtgcggtggctcatgcctgtaatcccaacactttgagaggccgaggcgggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa s panTro4.chr19 58961761 137 + 63644993 AAAG---TTCTTCTAggccgggtgcggtggctcacgcctgtaatcccaacactttgagaggccgaggcggggaaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828020 137 + 60714840 AAAG---TTTTTTTAggccgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgaggagggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594752 140 - 106955855 AAAGTTCTTCTTCTAggccgggtgtggtggctcacgcctgtaatcccaacactttgagaggccgaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884194 140 + 64156825 AAAGTTCTTCTTGTAggccgggtgcggtggctcacacctgtaatcccaacattttgagaggccaaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaactccatctctactaaaaa i rheMac3.chr19 C 0 M 85 s papAnu2.chr19 47022628 140 + 51301725 AAAGTTCTTcttgtaggccgggtgcggtggctcacacctgtaaccccaacattttgagaggccaaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaactccatctctacttaaaa i papAnu2.chr19 C 0 I 4 s calJac3.chr22 45312681 140 + 49145316 AAAGTTCTTCTTGTGggccgggtgcagtggcttgcgcccataatcccaacgcttttagaggctgaggtgggggaattggttgaggtcaggagattgataccagcctggccaacatggtgaaaccctgtctttactaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=-1219.000000 s hg38.chr19_GL949748v2_alt 25189 13 + 1064304 caaaaaac------------------------------------------------------------aaaaa- s panTro4.chr19 58961898 13 + 63644993 caaaaaac------------------------------------------------------------aaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828157 13 + 60714840 caaaaaac------------------------------------------------------------aaaaa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594892 12 - 106955855 caaaaaa-------------------------------------------------------------aaaaa- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47022772 73 + 51301725 aaaaaaatgagctgggtttagtggtgggttcctgtaatcccagttattcaggaggaatatctctactaaaaat- i papAnu2.chr19 I 4 C 0 s calJac3.chr22 45312821 13 + 49145316 -aaaaaaa------------------------------------------------------------aAAAAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=135799.000000 s hg38.chr19_GL949748v2_alt 25202 175 + 1064304 acaaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccaccctgggggacagaacaagactctttctcaaaa-aaataaaT s panTro4.chr19 58961911 175 + 63644993 acaaaactgagctggatatggtggtggatgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccaccctgggggacagaacaagactctttctcaaaa-aaataaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828170 175 + 60714840 acgaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccaaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgcgccacttcatgccagcctgggggacagaacaagagtctgtctcaaaa-aaataaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594904 173 - 106955855 acaaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccagcctgggggacagaacgaga--ctgtctcaaaa-aaataaaT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47022845 169 + 51301725 acaaaaattagctgggcatggtggtgtgtgcctgtagtcccagctactcgggaggctaaggcaggagaatcgcct-------gaacccgggaggcaaaggttgcagtgagcaaaggtcgcaccactacactccagcctgggcgacagagcgagactccgtctcaaaataaataaat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e calJac3.chr22 45312834 0 + 49145316 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=1365.000000 s hg38.chr19_GL949748v2_alt 25377 1 + 1064304 A s panTro4.chr19 58962086 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828345 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595077 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47023014 1 + 51301725 a i papAnu2.chr19 C 0 I 502 s calJac3.chr22 45312834 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=165198.000000 s hg38.chr19_GL949748v2_alt 25378 229 + 1064304 ggccgtgtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--aaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgtgcctgtagtcccagctattcgggaggctgaggcaggaaaattgcttgaatc-------cgggaggcgaaggttgcagtgagct s panTro4.chr19 58962087 229 + 63644993 ggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--aaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctaccaaaaatacaaaaattagctgggtgtggtggcgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaatc-------cgggaggcgaaggttgcagtgagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828346 229 + 60714840 ggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtcccacatgcctgtagtcccagctactccggaggctgaggcaggagaattgcttgaatc-------cgggaggcgaagtttgcagtgagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595078 229 - 106955855 ggccgggtgcagtggctcacacctgtattcccagcactttgggaggctgaggtgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcacacacctgtagtcccagctacttgggaggctgagtcaggagaattgcttgaacc-------tgggaggcgaaggttgcagtgagct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45312835 228 + 49145316 ATccaggtatagtggctcatgcctgtaattccagc-cttcaagaggattc-----ccaaatcaccagaggttggga-ttcaagaccaccctgagcaacatggagaaaccccatctctattaaaaatac-aaaattaaccaggcagggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccagaacacagaaggcggaggttgtagtgag-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=51799.000000 s hg38.chr19_GL949748v2_alt 25607 46 + 1064304 gagattgcgccactgtactccagccttggtgacaaagcgagactct s panTro4.chr19 58962316 46 + 63644993 gagattgcgccactgtactccagccttggtgacaaagtgagactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828575 46 + 60714840 gagattgtgccactgtactccagcctgggtgacaaagcgagaccct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595307 46 - 106955855 gagattgcaccactgcactccagcctgggtgacaaagcgagactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884420 46 + 64156825 gagactgcaccactgcactccagcctgggtgacagagcgagtctcc i rheMac3.chr19 M 85 C 0 s calJac3.chr22 45313063 43 + 49145316 ---atcatgccacttcactccagcctgggtgacagagcgagactcn i calJac3.chr22 C 0 I 10 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=18590.000000 s hg38.chr19_GL949748v2_alt 25653 28 + 1064304 atctcaaaaaacaaacaaacaaacaaac s panTro4.chr19 58962362 28 + 63644993 atctcaaaaaacaaacaaataaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828621 28 + 60714840 atctcgaaaaataaacaaacaaacaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595353 28 - 106955855 atctcaaaaaacaaacaaacaaataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884466 24 + 64156825 atctcaaaaaataaataaataaat---- i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e calJac3.chr22 45313106 10 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=6156.000000 s hg38.chr19_GL949748v2_alt 25681 12 + 1064304 aaacaaa-TAAA------T s panTro4.chr19 58962390 14 + 63644993 aaataaa-taaa----aat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828649 18 + 60714840 aaataaa-TAAATAAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595381 14 - 106955855 aaataaa-TAAA----AAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884490 9 + 64156825 -----aa-taaa----aat i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313116 15 + 49145316 aaTTAAATTCAA----AAT i calJac3.chr22 I 10 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=404591.000000 s hg38.chr19_GL949748v2_alt 25693 305 + 1064304 AAAGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAAAACATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACATCCTGTTCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT s panTro4.chr19 58962404 305 + 63644993 aaaGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAAAACATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACTTCCTGTTCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828667 301 + 60714840 AAAGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAACACAT---CTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTACAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595395 313 - 106955855 AAATTTCTCCTTGTGCACTTT-AAGCAAA-GGTGATCCCCCATCTCATGAAGCAGATCTAATTGGGAAAAACATCTCCTTCCTAATTCTCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACGCTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884499 311 + 64156825 aaAGTACTCC-TGTGCACTTT-AAGCAAA-GGTGATCCAGCGTCTTATGAAGCAGATCTAATTGGAAAAAA-ATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTATGCTAATCACATAG-GAACCTTGGGGGCAGGAGTCCTCTCGTCCTACTTACAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGGTGCTTCCTGAGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313131 313 + 49145316 AAAGTCGTCGTGTCCCACCTTAAAGTAAATGGCGATCCTTGTACTTATGCAGCAGATCTAATCGGGAAATACAACTCCTTTCTAATCATCTTACCCTGTTTTCATCGAGGGAGCTTCCAATTTCATCGTGTTTATCTGGAAAACGGAAGGGAAGACAAGG-AATGAGGCTAATCATATGG-GACCATTGTGGGCAGGCGTCCTCACGTCCTCCTTACTGACTTCCTG-CCCTGTTTGGGAAGCAGAAAAGA-----GTTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGACCGGGGACAGAGCCTCAGATTAACTCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470729 307 - 122678785 AAGATTCCTTCTGTGCCTTTT-AATCACA-GGGGACTGCCTGCTGCATGAGGTAAATATAATTTGGAAAAACAT---CACTCAAATTATCTTA-CATTTTTTTGCTGCAGGAGCTC-CACGTCCATCATCGTTATCTAGGAAACAGGATGCAAGAAAAAATAATCACAATGATTGAGTGGAGAACCTTGGGCACTTAGGTCCTCATGTTCTTCTTATGGACTTTAGC-CCCTCTTTGGGAACT-----GGAGAATGTCTTTTCTACTCTTGGGATGTTCACTGGGTCCCCAAATCAGGGCCAGAATATTAGATA-GCTTTT i canFam3.chr1 C 0 I 2753 e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=25114.000000 s hg38.chr19_GL949748v2_alt 25998 20 + 1064304 CTTAATAGTCCTGGAGTTTG s panTro4.chr19 58962709 20 + 63644993 CTTAATACTCCTGGAGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828968 20 + 60714840 CTTAATACTCCTGGAGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595708 20 - 106955855 CCTAATACTCCTGGAGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884810 20 + 64156825 CCTAATACTCATGGAGTTTG i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313444 20 + 49145316 CCTAATACTCCTGGAGTTTG i calJac3.chr22 C 0 I 604 e canFam3.chr1 19471036 2753 - 122678785 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=293891.000000 s hg38.chr19_GL949748v2_alt 26018 266 + 1064304 ATAGTATTTTTAATAACAAAAATATTTATGAATGACCCTGCTAACG--CCCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttctttct-------------tttattttttttg----agtcttgcactgttacccaagctggagtgcagtggcatgatctcagctcactgcaacctccgcctccc-gggttcaagagattctcctgcctcagccttccaagtagctgggactacaggcgcccgccaccac s panTro4.chr19 58962729 266 + 63644993 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--CCCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttctttct-------------tttattttttttg----agtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctccc-aggttcaagagattctcctgcctcagccttccaagtagctgggataacaggtgcctgccaccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828988 270 + 60714840 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--CCCCCTCCAGTTTGATTTCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CCCCATTCACCCAAAttctttctttct-------------ttttttttttttttttcagtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctccc-gggttcaagagattctcctgcctcagccttccaagtagctgggattacaggtgcctgccaccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595728 262 - 106955855 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--ACCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttcttttt-----------------ttttttttg----agtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcct-gggttcaagagattctcctacctcagccttcaaagtagctgggattacaggtacctgccaccac i nomLeu3.chr10 C 0 I 1525 s rheMac3.chr19 59884830 259 + 64156825 CTAG------------------TATTTATGAATGACACTGCTAACG--CCCCCTCCAGTATGATTCCTTGCCAGTCGTCTTTATCTTGACAAAGAA---CGCCATTCACCCAAATTCTTTCtttctttc--tttcttttttttttttttttg----agtcttgcattgtcacccaggctggagtacagtgacatgatctcagcccacagcaacctccgcctcct-gggtttaagagattctcctgcctcagccttccaagtagctgggattacaggcacctgccaccac i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314068 289 + 49145316 ATAGTATTTTTAATAACAAAAATATTTATGTATGACCCTGCTAATGCCCCCCCTCCAGTTTGATTGCCTATTAGTCTTCTCTGTCTTGACAAAGAATACCACCATTCACCCAAATTCTTAtttttttttaatatcttttttgtttttttttaggacagtctcacactgtcacccaggctggagtgcagtggcacgatcttggctcactgcaacttccaacttctggggttcaagcagttctcctaattcagcctcccaagtagctgggattacaggtaagtgccaccag i calJac3.chr22 I 604 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=3910.000000 s hg38.chr19_GL949748v2_alt 26284 4 + 1064304 accc s panTro4.chr19 58962995 4 + 63644993 accc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55829258 4 + 60714840 accc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59885089 4 + 64156825 accc i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314357 4 + 49145316 accc i calJac3.chr22 C 0 I 308 e canFam3.chr1 19471036 2753 - 122678785 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=108669.000000 s hg38.chr19_GL949748v2_alt 26288 128 + 1064304 tgctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtgatcaacctgccttggccactcagaatactgggattccaggcatgagccac s panTro4.chr19 58962999 128 + 63644993 tgctaatttttgtatttttggtagagacagggtttcaccatgttggccaggctggtctcaaactcctggccttaagtgatcaacctgccttggccactcagaatactgggattccaggcatgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55829262 128 + 60714840 tgctaatttttgtatttttagtagagacggggtttcaccatgttggccagcctggtctcaaactcctggcctcaagtgatcaatctgccttggccactcagaatgctgggattccaggcatgagccac i ponAbe2.chr19 C 0 M 656 s rheMac3.chr19 59885093 128 + 64156825 tgctaatttttgtaattttagtagagacagagtttcaccatggtggccaggctggtctcaaactcctggcctcaagtgatcaacctgccttggccactcaaaatgctgggattccaggcatgagccac i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314669 128 + 49145316 tgctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttaaacttcaggcctcaagtgatcaacctgccttggtttcccaaagtgctgggattacaggcatgagccaa i calJac3.chr22 I 308 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=32277.000000 s hg38.chr19_GL949748v2_alt 26416 66 + 1064304 tgcacctggccTATATTTCTATCTCCACAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT s panTro4.chr19 58963127 66 + 63644993 tgcgcccggccTATATTTCTATCTCCACAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59885221 66 + 64156825 tgcactcggccTATATTTCTATCTCCCCAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314797 66 + 49145316 tgcacctggccTGTATTTCTGTCTCACCAGTGGCACCACTTGGTCTGATTTAAAATATCACCTACT i calJac3.chr22 C 0 I 3697 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55829390 656 + 60714840 M e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=37115.000000 s hg38.chr19_GL949748v2_alt 26482 156 + 1064304 Tggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaagttagccgagcgtggtggcgggcc s panTro4.chr19 58963193 156 + 63644993 Tggccgggcgtggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaagttagccaagcgtggtggcgggcg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59885287 155 + 64156825 CAgccaggtacggtggctcaggcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtaaagagattgagaccatcctggataacatggtaaaaccctgtctctactaaaaatacaaaaa-ttagccaggcatggtggtgggcg i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55829390 656 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=151114.000000 s hg38.chr19_GL949748v2_alt 26638 320 + 1064304 cctgtagtcccagctactcgggaggctgaggcaggag-aatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgagggacagagccagactccgtctcaaaaaaaaaataaaaataaaaataaaa----atGAAATGAAatatcacctactcaccagtccctggcaaccaccagt--------tgcttctgtgagtttggcttttttagactacacatatgagtgagatcctgcagaatttgtctttctgagtctggcttattttgtttagcatgatatatgcggagatgttgatgaaagggta s panTro4.chr19 58963349 332 + 63644993 cctgtagtcccagctactcgggaggctgaggcaggag-aatggtgtgaacccgggaggcagagcttgcagtgagctgagatcgcaccactgcactccagcctgagtgacagagccagactccgtctcaaaaaaaataaataaataaaaataaaaTGAAATAAAATAAAatatcacctactcaccagtccctggtaaccaccagtatactctctgcttctgtgagtttggcttttttagactacgcatatgagtgagatcctgcagaatttgtctttctgagtccggcttattttgtttagcatgatatatgcggagatgttgatgaaagggta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830049 329 + 60714840 cctgtagtcccag-tactctggaggctgaggcaggagaaatgcaatgaacttgtgagacagagcttgcagtgagctgagattgcaccactgcactccagcctgggcgacagagccagactccgtctcaaaaaaaataaataaataaaaataaaataaaat---ataaaatatcacctactcaccagtccctggcaaccaccagtatactctctgcttctgtgagtttgggtttcttagactacacatatgagtgagatcctgcagaatttgtctttctgagtctggcttattttgtttagcacgatatatggggacatgttgatgaaagggta i ponAbe2.chr19 M 656 C 0 s rheMac3.chr19 59885442 320 + 64156825 cctgtagtcccagctacttgggaggctgaggcaggag-aatggcgtgaacctgggaggccgagcttgcagtgagctgagatcgcaccactacactccagcctgggcgacagagcgagactccgtctcaaaataaataaataaataaaaataa-----------ataaaGTAtcacctactcaccagtccctggcaaccaccagtagactctctgcttctgtgagtttggctttttcaggccacacatgtgagtgagatcatgcagaatttgtctttctgagtctggcttattttgtttaacataatgtatggggagatGTTGATGAAA-GGTA i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=8823.000000 s hg38.chr19_GL949748v2_alt 26958 5 + 1064304 taagt s panTro4.chr19 58963681 5 + 63644993 taaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830378 5 + 60714840 taaat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59885762 5 + 64156825 TAAAT i rheMac3.chr19 C 0 I 311 s macFas5.chr19 54903304 5 + 59248254 TAAAT i macFas5.chr19 M 20327 C 0 s papAnu2.chr19 47023517 5 + 51301725 taaat i papAnu2.chr19 I 502 C 0 s chlSab2.chr6 46735671 5 + 50890351 TAAAT i chlSab2.chr6 I 352 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I a score=1854538.000000 s hg38.chr19_GL949748v2_alt 26963 1074 + 1064304 ttccagttctaagatgaagaagttcaggtgctcagcatggtggcaatggatgtgctaattaatttgactgtgataatcattacacaatgtacaggtggatcaaatcatcagattgtataccttgaatatatacaatcttcatttgtcaatttgatatttttaaatttaaaaaGTCGTATTGCCTGAAACGCACCAACTCTTACTACATCTAGTCCCTTATTTTCCAAAAGCAGCCAGAGgccgggcatgatggcctgtgcctgtaatctcagatgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgattgca-------------------------------------------ccactgcactccagcctgggcaaccgagtgggaccctgtctcaaaaaaaaaaaaaaaaaaaaaa----gcagccagtgacccttccagcatataaataaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tatgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgagactttgcttttgctgctctctctccctggagggctgttctccagatatcggtgtggttgggtcattctcatccttcaTGCTtgtggcagatagaccctaagggggcactcaggagactcaggagccctgcttcctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagatctgtgactttcttctcaccaatagctatggcaaaggtgatgggatgttatgctcttgattatgttacattacataaaactctgtttgctagggcatttgctctctctttcttct--ctctctctcaatctctcttcttgcaagtgctgcagaatcattctagcatgaatcctacagctataaagaaccagatattgctatcaaccacaggagtggagaaatggacccttccccagtcaagcctccagatgagccagatgagaacacagcccttgttgacaccttgattgcatcctt s panTro4.chr19 58963686 1077 + 63644993 ttccagttctaagatgaagaagttcaggggctcagcatggtggcaatggatgtgctaattaatttgaccgtgataatcattacacaatgtacaggtggaacaaatcatcagattgtataccttgaatatatacaatcttcatttgtcaatttgatatttttaaatttaaaaaGTCATATTGCCTGAAATGCACCAACTCTTACTACATCTAATCCCTTACTTTCCAAAAGCAGCCAGAGgccgggcatgatggcctgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcgca-------------------------------------------ccactgcactccagcctgggcaaccgagtgggaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaagcagccagtgaccgttcaagcatataaatcaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tatgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgagactttgcttttgctgctctctc-ccctggagggctgttctccagatattggtgtggttgggtcattctcatccttcaTGCTtgtggcagatagaccctaagggggcactcaggagactcaggggccctgcttactggtgttcatgcctttgtctaatcccctcaccttgagtgtggagatctgtgactttcttctcaccaatagctatggcaaaggtgatgggatgttatgctcttgattatgttacattacataaaactctgtttgctagggcatttgctctctctttcttct--ctctctctcaatctctcttcttgcaagtgctgcagaatcagtctagcatgaatcctacagctgtaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccagtcaagcctccagatgagccagatgagaacacagccctggttgacaccttgattgcatcctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830383 1060 + 60714840 ttccagttctaagatgaagaagttcaggtgcccagcatggtgacaatggatgtgctaattaatttgactgtgataatcattacacaatgtacaggtggatcaaatcatcagattgtataccttgaatatatacaatcttcttttgtcaatttgatatttttaaatttaaaaaGTTGTATTGCCTGAAATGCACCAACTCTTACTACATCTAATCCCTTATTTTCCAAAAGCTGCCAGAGgccgggcatgatggcatgtgcctgtaatctcagctgcttggggggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcaca-------------------------------------------ccactgcactccagcctgggcaacggagtgagaccctgtctcaaaaaaaaaaaaaaaaaaa-------gtagccagtgacccttcaagcatgtaaataaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tctgtcctcctttctgtgtctcaatcattccaggaacactcacacttgtgagactttgattttgctgctctctctccctggagggctgttctccagatatcggtgtggttgggtgattctcatccttcatgtctgtggcagatagaccctaagggggcactcaggagactcaggagccctgcttcctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaatagctatggcaaaggtgatgggatattatgctcttgattatgttacattacataaaa--ctgtttgctagggcatttgctctctctttcttct--ctctctctcagtctctcttcttgcaagtgctgcagaatcagtctagcatgaatcctacagctgtaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccagtcaagcct---------ccagatgagaacacagccctggttgacaccttgattgcatcctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59886078 1081 + 64156825 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcattacataatgtatagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTGATCCCTTATTTTCCAAAAGCAGCCAGAGgccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncc-----------------gaaa-------------------aaaaaaaaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccagttcaacttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgtcttctatccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctctccctgaagggctcttctccagatatcgatgtggttgggtcattctcatatttcaTGCCtgtgacagatagaccttaagggggcactcaggagactcaggagccctgctttctggtgttcatgcccttgtctaatctcctcaccttgagtgtggagacctgtgactttcttctcaccaatagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctc----ctctctcaatctctcttcttgcaagtgctgcagaatcagtctaacatgaatcctacagctgcaaagaaccagatgttgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggatgacaacttgattgcatcctt i rheMac3.chr19 I 311 C 0 s macFas5.chr19 54903309 1092 + 59248254 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcattacataatgtacagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTGATCCCTTATTTTCCAAAAGCAGCCAGAGgccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaatgctgcagtgagctgtgattgca-------------------------------------------ccattgcactccagcctgggcaacagagtgag---ctgtctcgaaaaaaaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccagttcaacttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgccttctatccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctctccctgaagggctcttctccagatatcgatgtggttgggtcattctcatatttcatgcctgtgacagatagaccttaagggggcactcaggagactcaggagccctgctttctggtgttcatgcccttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaatagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctc----ctctctcaatctctcttcttgcaagtgctgcagaatcagtctaacatgaatcctacagctgcaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggatgacaacttgattgcatcctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47023522 1094 + 51301725 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTGGCAATGGATGTGCTAATTAATCTGCCTGTGATCATCATTACATAATGTACAGATGGATCAAATCATCAGATTGTAtatcttgaatatatacaatCTTCATTTGtcaatttgatatttttaaatttaaaaagtcatattgcCTGAAATGTACCAACTCTTACCACATCTAATCCCTTATTTTCCAAAAGCAGccagaggccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaatgctgcagtgagctgtgatcgca-------------------------------------------ccattgcactccagcctgggcaacagagtgagaccctgtctcggaaaaaaaaaaaaaaaaaaa-----gcagccagtgACCCTTCaagcatataaataaaatcatgccattctccagttCAACTTCATCAGTGGGTTCCTGTTTTTTCAAAGCAGACTCTAGGACCAGTTCAAACACCCACAAGACCCTAGATGCTCTAGGCCCTGCCTTCTATCCACACCTTTTATTCTGCTGTTCTTTTCTCTGTCCTCCTTTCTGTGTCTCAATCATTCCAGGAACACTCACACTTCTGGGACTTTGCTTTTGCTGCTGTCTCTCCCTGAAGGGCTCTTCTCCAGATATTGATGTGGTTGGGTCATTCTCATATTTCATGCCTGTGACAGATAGACCTTAAGGGGGCACTCAGGAGACTCAGGAGCCCTGCTTTCTGGTGTTCATACCCTTGTCTAATCCCCTCACCTTGAGTGTGGAGACCTGTGACTTTCTTCTCACCAATagatatggcaaaggtgatgggatgtTATGCTCTTGATTATGCTACATTACATAAAACTCTGTTTGCTAGGGCatttactctctctctcctct----ctctctcaatctctcttctTGCAAGTGCTGCAGAATCAGTCTAACATGAATCCTAAAGCTGCAAAGAACCAGATATTGCTAGCAACCACAGGAGTGGAGAAATGGACCCTTCCCCAATCAAGCC----------CCAGATGAGAACCCAGCCCTGGTTGACAACTTGATTGCATCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46735676 1088 + 50890351 TTCCACTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcgttacataatgtacagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTAATCCCTTATTTTCCAAAAGCAGCCAGAGgccgggcatgatggcatatgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcgca-------------------------------------------ccactgcactccagcctgggcaacagagtgagaccctgtctcg-----aaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccag------ttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgccttctgtccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctgtccctgaagagctcttctccagatatcgatgtggttgggtcattctcatatttcatgcctgtgACAGATAGACCTTAAGGGGGCACTCGGGAGACTCAGgagccctgctttctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaacagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctcctctctctctcaatctctctTCTTGCAAGTGCTTCAGAATCAGTCTAacattaatcctacagctgcaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggttgacaccttgattgcatcctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I a score=1413945.000000 s hg38.chr19_GL949748v2_alt 28037 608 + 1064304 atgagacccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagctgtagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatagcttgctcttatttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTTTT--GTAATGGAAGCATTTATATGCCCATTTTgtaataagtaaaaagtagtataataaaaaagtaaaaagtaGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAACAGTAGATGATATGCCAGAGAACATAATTGGGAAATGGCAAAT s panTro4.chr19 58964763 610 + 63644993 atgagacccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccgtagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatagcttgctcttatttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTTTTTTGCAATGGAAGCATTTATATGCCCATTTTGTAATAAGTAAAAAGTAGTATAATAAAAAAGTAAAAAGTAGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATGTGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATATGCCAGAGAACATAATTGGGAAATGGCAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55831443 584 + 60714840 atgagacccaaagcagaggattcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccatagatcactaatacaATGCCTCTCAcacttattctccatctataatgtgttttttaattactctgatagcttgctcttatttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCACTAATTGTTTTT---GTAATGGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATAAAGTGATTTGCGAAGCAGCAAAAAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGTGATAGAGGTGAAGAAATCGGGAAACAGTAGATGATATTCCAGAGAACATAATTGGGAAATGGCAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102597515 583 - 106955855 AtgtgacccaaagcagaggactcagctaagctgtgcctagactcctgacccacatcaactgtgagataataaataggtgtttcagtctgctaaattagtggtaatttgttttgcagccatagatcactaatacaATGCCTCTCACAGTTATTTTCCATCTATAATGTGTTTTTTAATTACTCCAATAGCTTGCTCttatttatttatttctttcaaagaagaatgtgagctcctgttggccagagacctggtccatctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAACGGACAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTT----GTAATGGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAACAGTAGATGATATGCCAGAGAACATAACTGGAAAATGGCAAAT i nomLeu3.chr10 I 1525 I 717 s rheMac3.chr19 59887159 581 + 64156825 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgaggtaataaataggtgtttcaggcggctaaattagtggtaattagttatgcagccatagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatatctttctg----ttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAAATTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATATAATGGTATAGCTGCGATAGAGGTAAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGAACATAATTGGGAAATGGCAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54904401 581 + 59248254 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgaggtaataaataggtgtttcaggcggctaaattagtggtaattagttatgcagccatagatcactaatacaatgcctctcacagttattctccatctataatgtgttttttaattactctgatatctttctg----ttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAAATTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATATAATGGTATAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGAACATAATTGGGAAATGGCAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47024616 585 + 51301725 ATGAGAACCAAAGCAGAGGACTCAGCTAAGCTGTGcctggactcctgacccacaTCAACTGTGAGGTAATAAATAGGTGTTTCAGGCTGCTAAAttagtggtaatttgttatgcagccatAGATCACTAATACAATGCCTCTCACAGTTATTCTCCATctataatgtgttttttaattacTCTGATATCTTTctgctatttatttctttcttccaaagAAGAATGTGAGCTCCTGTTGGCCAGAGACCTGGTCTGTCTCAGTTCCTACAATATGCTCAGGATCTACCAAAGTATCTGAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATtttgcattaaatttttttt--gtaatagaaGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTATAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGCACATAATTGGGAAATGGCAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46736764 584 + 50890351 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccatatatcactaatacaATGCccctcacagttattctccatctataatgtgttttttaattactctgatatctttctgttctttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGACTAAATAGGCAGCTATTTTTGTGCCAGGTATTTTGCATT-ATTTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGCAAAGCAGCAAACAGATTATATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAACTGATACTATAGCCTGTCTTGTGATGTAATGGTATAGCTGTGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGGGAACATAATTGGGAAATGGCAAAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I a score=77884.000000 s hg38.chr19_GL949748v2_alt 28645 44 + 1064304 AATCGCGAGGCTTTTAGGGCTAAAGTGTGGGTGCAGAAATTCTT s panTro4.chr19 58965373 44 + 63644993 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGTGCAAAAATTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832027 44 + 60714840 AATCACCAGGCTTTTAGGGCTAAAGTGTGGGTGCGAAAATTCTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59887740 44 + 64156825 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGAATGAAAATTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54904982 44 + 59248254 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGAATGAAAATTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025201 44 + 51301725 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGgaatgaaaattctt i papAnu2.chr19 C 0 I 15035 s chlSab2.chr6 46737348 44 + 50890351 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGTACGAAAATTCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=310628.000000 s hg38.chr19_GL949748v2_alt 28689 239 + 1064304 AAGACTACAAGAACGAGTTATGGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACCTTGTTGGAGTATCATTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTATTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCACGGCTACTTCTACACTACACTGATGACTGTAAAGTCTCTCCAGGGATTTCCCATGATATGG s panTro4.chr19 58965417 239 + 63644993 AAGACTACAAGAATGAGTTATGGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACTTTGTTGGAGTATCATTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTATTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCACAGCTACTTCTACACTACACTGATGACTGTAAAGTCTCTCCAGGGATTTCCCATGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832071 234 + 60714840 AAGACTACAAGAAAGAGTTATTGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACCTTGTTGGAGCATCATTGATCAACAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTT-----CTACACTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i ponAbe2.chr19 C 0 M 630 s rheMac3.chr19 59887784 238 + 64156825 AAGACTACAAGAAAAAGTTATTGGGAATACAA-TTGAAATCAACATCAAAGTGATGAGAACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTTCTGCACTACATTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54905026 238 + 59248254 AAGACTACAAGAAAAAGTTATTGGGAATACAA-TTGAAATCAACATCAAAGTGATGAGAACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTTCTGCACTACATTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46737392 239 + 50890351 AAGACTACAAGAAAAAGTTATTGGGAATACAATTTGAAATCAACATCAAAGTGATGAGCACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAACCCAGGCTAAGTCATTGGTGTGGACCCTTGGCTACTTCTGCACTATACTGATGACTATAAGGTCTCTCCAGGGATTTCCCATGATATGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=238356.000000 s hg38.chr19_GL949748v2_alt 28928 287 + 1064304 CAGGACTGACCTACTGGAAGCAACTGTGGTCAGTTGAGAGGTATTGTTTAGTGACTAATAaatgaatggatga----------------atggatggatggatggatggatggatggatagatggatAggtgggt-gggggtgagtgaatgggtgaaagggtggatgagtggatgaatgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtaggtagatagatggatgaaggggtgggtggacagatgaatggaagggttggtggttggatggattaatggatagatga s panTro4.chr19 58965656 279 + 63644993 CAGGACTGACCTACTGGAAGCAACTGCGGTCAGTTGAGAGGTATTGTTTAGTGACTAATAaatgaatggatga----------------atggatggatggatggatggat--------atatggatAGGTCGGT-GGGGGTGAGtgaatgggtgaaagggtggatgagtggatgaaagggtggaaggatggacaaatgagtggctgggtaaatagatggGTAGGTAGGTAgatagatggatgaaggggtgggtggacagatgaatggaagggttggtggttggatggattaatggatagatga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888022 296 + 64156825 CCAGATTGACCTACTGGAAGCAACTGTAGTCAATTGAGAGATATTGTTGAGTGACTAATAAatgaatagatggatggatggatggatgaatggatggatggatggatggat--------atatggataggtgggtggggggtgaatgaatgggtgaaagagtggatgagtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtgggtagatagatggatgAAGGGGTGGGTAGACGAATGAATGGAAGGGTTGGTGGTtggatggattaatggatagatga i rheMac3.chr19 C 0 I 236 s macFas5.chr19 54905264 280 + 59248254 CCAGATTGACCTACTGGAAGCAACTGTAGTCAATTGAGAGATATTGTTGAGTGACTAATAAATGAATAgatgg----------------atggatggatggatggatggat--------ATatggataggtgggtggggggtgaatgaatgggtgaaagagtggatgagtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtgggtagatagatggatgaaggggtgggtagacgaatgaatggaagggttggtggttggatggattaatggatagatga i macFas5.chr19 C 0 I 192 s chlSab2.chr6 46737631 280 + 50890351 CCAGATTGACCTACTGGAAGCAACTGTAGTCAGTTGAGAGGTATTGTTGAGTGACTAATAAATGAATAgatgg----------------atggatggatggatggatggat--------ATatggataggtgggtggggggtgaatgaatgggtgaaagggtggatgggtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtacgtgggtagatagatggatgaaggggtgagtggacgaatgaatggaagggttggtggttagatggattaatggatagatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=9460.000000 s hg38.chr19_GL949748v2_alt 29215 10 + 1064304 atggatggat s panTro4.chr19 58965935 10 + 63644993 atggatggat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888554 10 + 64156825 atggatggat i rheMac3.chr19 I 236 C 0 s macFas5.chr19 54905736 10 + 59248254 atggatggat i macFas5.chr19 I 192 C 0 s chlSab2.chr6 46737911 10 + 50890351 atggatggat i chlSab2.chr6 C 0 I 176 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=277224.000000 s hg38.chr19_GL949748v2_alt 29225 329 + 1064304 ggatggatggatggatggatggatgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtaggagggtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------gggtagattgatagatggatgggtgagtAGATAAATGGGTAGATGAAAGTGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCATGTATGTTACAATCCTCCCACGTGCATCTTCTCACTGTGGTCCTCATCATTTTTT--TTTCAGTTACCTGCACCGTGCCTCCCATACTTTTCCACACAATGGGA s panTro4.chr19 58965945 385 + 63644993 ggatggatggatggatggatggatgagttgatggatagatggatggatggatggatgagttgatggatagatggataagtgagtggatggatggGTGAATGAGTGGGTAGGAGAGtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggtaggtagattgatagacggatgggtgggtagattgatagatggatgggtgggtagataaatggGTAAATGAAAGCGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCATTTATGTTACAATCCTCCCACGTGCATCTTCTCACCGTGGTCCTCATCATTTTTT--TTTCAGTTACCTGCACCATGCCTGCCACACTTTTCCACACAATGGGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888564 331 + 64156825 ggatggatggatggatggatgggtgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtgggagggtagatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagatggatgggtgggtAGATAAACGGGTAGATGAAAATGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTTAATTTCAGTTGCCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54905746 331 + 59248254 ggatggatggatggatggatgggtgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtgggagggtagatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagatggatgggtgggtagataaacgggtagatgAAAATGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTTAATTTCAGTTGCCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738097 327 + 50890351 ggatggatggatggatggatgggtgagtt----gatagatggat--------------------------------aagtgagtagatggatgggtgaatgagtgggtgggagggtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagacagattggtgggtagataaatgggtagatgaaagtgatgTAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTAAATTTCAGTTACCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i chlSab2.chr6 I 176 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=385562.000000 s hg38.chr19_GL949748v2_alt 29554 302 + 1064304 TCTCTTAGCCCCACAATCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAATGAAATATAAA-TTTTCATTTATgtctgaatagcaactgtgaagctcattgtttttgtgacaccggggaggtcacctaatctctatgagcaaaaagaagttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT s panTro4.chr19 58966330 301 + 63644993 TCTCTTAGCCCCACAATCCATTATTTGCCATTCCTACATCCCTCATGGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAATGAAATATAAA-TTTTCATTTATGTCTGAATAG-AACTGTGAAGCTCATTGTTTTtgtgaaaccggggaggtcacctaatctctatgagcaaaaagaagttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832935 301 + 60714840 TCTCTTAGCCCCATAATCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAAAGAAATATAAA-TTTTCATTTATgtctgaacagcaactgtgaagctcattgtttttgtgacaccggggaggtcacctaatctccataagcaaaaagaagttagtaacacaaccaccctcataggaaatgaagactgaatgtgttagtggaggcaagttacctgtc-tagagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i ponAbe2.chr19 M 630 C 0 s rheMac3.chr19 59888895 297 + 64156825 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAGATATAAA-TTTTCATTTATgtctgaactgcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcacaggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagagaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906077 297 + 59248254 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAAATATAAA-TTTTCATTTATgtctgaactgcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcacaggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagagaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738424 298 + 50890351 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAAATATAAATTTTTCATTTATgtctgaacagcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaagcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=12555.000000 s hg38.chr19_GL949748v2_alt 29856 8 + 1064304 ATCACTCT s panTro4.chr19 58966631 8 + 63644993 ATCACTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833236 8 + 60714840 ATCACTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889192 8 + 64156825 ATCACTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906374 8 + 59248254 ATCACTCT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738722 8 + 50890351 ATCACTCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103184196 8 + 122678785 ATCATGCA i canFam3.chr1 n 2753 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=226918.000000 s hg38.chr19_GL949748v2_alt 29864 133 + 1064304 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCAGAGCATG-----------------------------------AAATCAGTC s panTro4.chr19 58966639 133 + 63644993 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCAGAGCATG-----------------------------------AAATCAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833244 133 + 60714840 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCACAGCATG-----------------------------------AAATCAGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889200 133 + 64156825 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCATTGCCATTACTTGTCACATTCCAGAGCATG-----------------------------------AAATCTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906382 133 + 59248254 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCATTGCCATTACTTGTCACATTCCAGAGCATG-----------------------------------AAATCTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040280 133 + 51301725 ATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACACGCAGCTGTAGTTCCCAGCGTTGCCGGCTGTCACGTCCTCCAGGGTG-----------------------------------AAGTCCGTC i papAnu2.chr19 I 15035 C 0 s chlSab2.chr6 46738730 168 + 50890351 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCACTGCCATTACTTGTCACATTCCAGAGCATTCACATCTGTCTGTTTTTTTCTTACTTGTCACATTCACATCTGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103184204 133 + 122678785 AAACCTACCTCTCACCTGGATCTCCAGAAAATTGCTAGGCTGTGAGGTCAAAAAAGGGGCCCCTATCTGGAAGTACACGCAGCTGTAGTTCCCGGCATCACTGACTGTCACACTCCTGAGGGAG-----------------------------------AAGTCTGTC i canFam3.chr1 C 0 T 1206 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=2548.000000 s hg38.chr19_GL949748v2_alt 29997 1 + 1064304 T s panTro4.chr19 58966772 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833377 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889333 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906515 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040413 1 + 51301725 T i papAnu2.chr19 C 0 T 14866 s chlSab2.chr6 46738898 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19473789 1 - 122678785 t i canFam3.chr1 I 2753 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=348393.000000 s hg38.chr19_GL949748v2_alt 29998 205 + 1064304 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAACAGAGCAATTACAATACATTCGGTTCCATTGTATGGAGTGAGACATCGAAGTGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC s panTro4.chr19 58966773 205 + 63644993 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCGGTTCCATTGTATGGAGTGAGACATCGAAGTGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833378 205 + 60714840 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTGAGACATCGAAGTGTT---CTGGGACCTGGAGTCATCCCA-----------GGGTCTACACTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889334 205 + 64156825 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTTAGACATCAAAATGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTGAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906516 205 + 59248254 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTTAGACATCAAAATGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTGAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738899 216 + 50890351 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTGAGACATCAAAGTGTC---CTGAGACCTGGAGTCATCCCAGGGTCATCCCTGGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTAAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i chlSab2.chr6 C 0 I 457 s canFam3.chr1 19473790 208 - 122678785 GGATTTTTCTTATTTTCTCAAATTGTAGTGGTTCTGGAATCCCTGTTTTCAGCAGAGCAAGAGCAATACATTTGTGTCTATTGTATGGAATCAGACATCAGAGTCTCATACTGTGACCTGGAGTCATCTCG-----------GGGTCTATATTGAGTAAGAGGGAAGGTTTTAGGAGGGATTCTGAAGAGGACAAAGCAACAGGGGTGAAGAGAAGTAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47040414 14866 + 51301725 T a score=4153.000000 s hg38.chr19_GL949748v2_alt 30203 4 + 1064304 CAGG s panTro4.chr19 58966978 4 + 63644993 CAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833583 4 + 60714840 CAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889539 4 + 64156825 TAGG i rheMac3.chr19 C 0 I 345 s macFas5.chr19 54906721 4 + 59248254 TAGG i macFas5.chr19 C 0 I 354 s canFam3.chr1 19473998 4 - 122678785 CAAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46739115 457 + 50890351 I e papAnu2.chr19 47040414 14866 + 51301725 T a score=344342.000000 s hg38.chr19_GL949748v2_alt 30207 174 + 1064304 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCCgtatta---accatgtctttcatcttctgcatttgatgctttaacatcttggggccttgctgcccttggtgggacctcccctcgcagggttagttaatttctagagccagtaaacaacttgtcctcaag s panTro4.chr19 58966982 170 + 63644993 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCtgtatta---accatgtctttcatcttccgcatttgatgctttaacgtcttggggccttgctgcccttggtgggacctcccctcgcagggtta----atttctagagccagtaaacaacttgtcctcaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833587 174 + 60714840 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCCgtatta---accatgtctttcattttctgcatttgatgctttaatgtcttagggccttgctgcccttggtggtacctcccctcccagggttagttaatttctagagccagtaaacaacttgtcctcaag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889888 176 + 64156825 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCtgtattaaccaccatgtctttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagtcagtaaaccacttgtcctcaa- i rheMac3.chr19 I 345 C 0 s macFas5.chr19 54907079 176 + 59248254 gcttttccattttctACTGCACTTGGGGACTATCTCATCCATCTCTCtgtattaaccaccatgtctttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagtcagtaaaccacttgtcctcaa- i macFas5.chr19 I 354 C 0 s papAnu2.chr19 47025548 176 + 51301725 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCGTCCACCTCTCTGTATTAACCACCATGTCTTTCATTTTCTGCATttgatgctttgacatcttgggGCCTTGCTGCCCTTGGTGGGACCACCCCTCCCAGGGTTAGTTAATTTCTAGAGCCAGTAAACCACTTGTCCTCAA- i papAnu2.chr19 T 14866 C 0 s chlSab2.chr6 46739572 161 + 50890351 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCTGTA---------------ttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagccagtaaaccacttgtcctcaa- i chlSab2.chr6 I 457 C 0 s canFam3.chr1 19474002 168 - 122678785 GCATCCACA-TTTCCAATGCACCTGGGGTCATTCTTACCCATCTCt--atatta---accacatcttttattttctgtattcaacactttgatatcttgggaccttgctgacccta--gagatatcccctctcaagg-tatccacttcctagagaaaggagacaactttccctcaag i canFam3.chr1 C 0 I 137 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=362884.000000 s hg38.chr19_GL949748v2_alt 30381 175 + 1064304 --------gatgtccctcaaatgcaagccaatagatccagagcccatactctcaaccaccttaattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagcctctacaccccaaagccaattctttttttgtttttcttt s panTro4.chr19 58967152 175 + 63644993 --------gatgtccctcaaatgcaagccaatagatccagagcccacactctcaaccaccttcattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagcctctacaccccaaagccaattctttttttctttttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833761 175 + 60714840 --------tatgcccctcaaatgcaagccaatagatccagatcccacactccaaaccaccttcattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaaatagacaaccagggacagcctctataccccaaagccaattctttttttctttttcttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59890064 175 + 64156825 --------tatgtccctcaaatgcaagccaatagatccagagccctcattcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattctttttttttttcttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907255 175 + 59248254 --------tatgtccctcaaatgcaagccaatagatccagagccctcactcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattctttttttttttcttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025724 175 + 51301725 --------TATGTCCCTCAAATGCAAGCCAATAGATCCAGAGCCCTCACTCCCAACCACCTTCATGATGAGGCTCTCACACTCAAGGTGAAAGTTGTCCTCTCCTAATCACCCCAGGTCCAAGAACTAGACAACCAGGGACAGTCTCTATACCCCAaagcccattcttttttttttttctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46739733 172 + 50890351 --------tatgtccctcaaatgcaagccaatagatccagagccctcactcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaattaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattcttttttcttttttt--- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474307 181 - 122678785 gatgCAAgcacccttcttaagtgcaaaacaaccaatccagagctcatacttccaaccacctcctctat--ggctctcacactctgggccagggttcccctgccctaatcacttcagggccagataccagacagtcagggacagcatctataccccatagttaatcctaagcctgttccttctt i canFam3.chr1 I 137 I 1 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=576564.000000 s hg38.chr19_GL949748v2_alt 30556 351 + 1064304 tctttct--------ttcttttcttttctttt-cttttttttt---ttttttttttttttttgagacaggttctcattctatcacccaggcttgagtgcagtggcacgatcttggctcaccgcagcctctgcctctggggttcaagcaattctcgtgcctcagcctcccgagtagctgaaagcacaggtgcacaccaccacacccaggtaattattgtatttttgtagagatggagtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccaccctcctaggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc s panTro4.chr19 58967327 355 + 63644993 tctttct--------ttcttttcttttctttttcttttcttttcttttttttttttttttttgagacaggttctcattctatcacccaggcttgagcacagtggcatgatcttggctcacggcagcctctgcctccggggttcaagcaattctcgtgcctcagcctcccaagtagctgaaagcacaggtgcacaccaccacacccaggtaattattgtatttttgtagagatggggtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccgccctcctaggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833936 363 + 60714840 tctttcttttctttcttcttttcttttctttttcttttttttttttttttttttttttttttgagacaggttctcattctatcacccaggcttgagtgcagtggcacaatcttggcttactgcagcctctgcctcctgggttcaagcaattctcatgcctcagcctcccaagtagctgaaagcacaggtgcacaccaccacacccaggcaattattgtatttttgtagagatggggtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccgccctcctcggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59890239 313 + 64156825 t--------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacgatcttggctcaccgcagcctctgcctcctgggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattatatttttgtagagatggagtttcgccttgttacccaggctgatgtcacactcctgacctcaggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907430 313 + 59248254 t--------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacgatcttggctcaccgcagcctctgcctcccaggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattatatttttgtagagatggagtttcgccttgttacccaggctgatgtcacactcctgacctcaggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025899 348 + 51301725 ttctttc--------tttctttcttttttctttcttttc-------ttttctttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacaatcttggctcactgcagcctctgcctcccgggttcaagcagttctcgtgcctcagtctcccaagtagctggaagcacaagtgcacaccaccacacccaggtaattattgtatttttgtagagatggaatttcgccatgttacccaggctgatgtcaaactcctgacctcaggcgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctAATCTTGTTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46739905 312 + 50890351 ---------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgtagtagcacgatcttggctcaccgcagcctctgcctcccgggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattgtatttttgtagagatggagtttcaccatattacccaggctgatgtcaaactcctgacctcgggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19474488 1 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=274550.000000 s hg38.chr19_GL949748v2_alt 30907 144 + 1064304 cacaaaatacaatcaaagctctggtccacagttcttcctcctccctctgc-ccctcattgaccctggtgcttccccacatactcc-----ccccagtatagccttcctcctcctcttgggaactg-taacagacca---tcttttccatggcaa s panTro4.chr19 58967682 146 + 63644993 cacaaaatacagtcaaagctctggtccacagttcttcctcctccctctgc-ccctgattgaccctggtgcttccccccatacccc---acccccagtatagccttcctcctcctcttgggaactg-taacagacca---tcttttccatggcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55834299 146 + 60714840 cgcaaaatacaatcaaagctctggtccacagttcttcctcctccctctgc-ccctgattgaccctggggcttccccccatacccc----cccatagtatagggttcctcctcctcttgggaactgttaacagacca---tcttttccatggcaA i ponAbe2.chr19 C 0 M 1306 s rheMac3.chr19 59890552 145 + 64156825 cacaaaatacaatcaaagctctggcccacag---ttcctccttcctctgc-ccctgattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacca---tcttttccatggcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907743 145 + 59248254 cacaaaatacaatcaaagctctggcccacag---ttcctccttcctctgc-ccctgattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacca---tcttttccatggcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026247 148 + 51301725 CACAAAATACAATCAAAGCTCTGGCCCACagttcttcctccttcctctgc-ccctgATTGACCCTGGTGCTTcccc-catacccccacccccATAGTATAGCCTTCCCCCTCCTCTTGGGAACTG-TAACAGACCA---TCTTTTCCATGGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740217 146 + 50890351 cacaaaatacagtcaaagctctggcccacagttcttcctccttcctctgc-cc--gattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacct---tcttttccatggcaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474489 145 - 122678785 cagaaaccacagtaaaggctcttgccta---gtcttatccctccctctgcttcctcactgaccctgatacttctctatatggccc----tgtatggcatggcatacc-cctcttcttgggaagtc-taacaaactatgtttttttcaatgacag i canFam3.chr1 I 1 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=25604.000000 s hg38.chr19_GL949748v2_alt 31051 24 + 1064304 tcatcacttg------------------------------gtctgtcagtctta-- s panTro4.chr19 58967828 24 + 63644993 tcatcacttg------------------------------gtctgtcagtctta-- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890697 24 + 64156825 tcatcgcttg------------------------------gtttgtcagtctta-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907888 24 + 59248254 tcatcgcttg------------------------------gtttgtcagtctta-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026395 24 + 51301725 TTATCGCTTG------------------------------GTTTGTCAGTCTTA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740363 24 + 50890351 tcatcgcttg------------------------------gtttgtcagtctta-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474634 56 - 122678785 tcatctcttaaaaaaaaaaaaaaaaaaaaaaaaGACAGTCATCTCTTCATCTTTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=254051.000000 s hg38.chr19_GL949748v2_alt 31075 134 + 1064304 -----ccatacccc-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAA------TCTCTGATGAGAATCTTGCTCCACATTC-GGTTCCCATTTC----------CACATTGAAGGTGTTGC s panTro4.chr19 58967852 134 + 63644993 -----ccatacccc-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAAAA------TCCCTGATAAGAATCTTGCCCCACATTC-GGTTCCCATTTC----------CACATTGAAGGTGTTGC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890721 141 + 64156825 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907912 141 + 59248254 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026419 137 + 51301725 -----CCGTACCCT-AATTTTCTATTA----ACCATATTCTACACCACTCTCCCACATCCACATCATTAGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740387 141 + 50890351 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACTCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318560 130 + 49145316 -----CTGTACCCC-CATTTTCTATTG----ACCGTATTCTACACCACTCTGCAGCATCCACATCATTGGGACCCTCTCACAA------TCCCTGATGGGAATCTTGCCCCACATTC-CGTTCCCATTTC----------CACATTTAAGATGTCGC i calJac3.chr22 I 3697 C 0 s canFam3.chr1 19474690 149 - 122678785 CCATACTGTACCTCAAATTTTCTATTGGCA-TCTATATTCTAAAACACTCTCCCACATCCACCTCATTGATACATACTCATAA------TCTTTGATGAGAGCCTGTCCCCACACTC-ACTTCCCATTTCTCCCATACTTTACACCCAAGTGGTCAC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=516.000000 s hg38.chr19_GL949748v2_alt 31209 2 + 1064304 AT- s panTro4.chr19 58967986 2 + 63644993 AT- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890862 2 + 64156825 AT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908053 2 + 59248254 AT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026556 2 + 51301725 At- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740528 2 + 50890351 AT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474839 2 - 122678785 -TC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=327264.000000 s hg38.chr19_GL949748v2_alt 31211 321 + 1064304 CTATCCttcttcttctt--------ttttttttttagacggagtcttgctctttcatccaggctgcagtgcagtggcacaatctcagctcattacaacctctgccttctgggctcaagagattctcttcctgcctcagcctccctagtagctgggattacaggcgcctgccaccacgcccagctaatttttgtattttaa------------------------------------------------------------gtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccgacctcaagtgat------------------------------ctgcccacctctgcctcccaaagtgctgggattacaggcatgagccaccgcgccGTGCCTGGCCTGCAT s panTro4.chr19 58967988 329 + 63644993 CTATCCttcttcttcttcttcttttttttttttttagacagagtcttgttctttcatccaggctgcagtgcagtggcacaatctcagctcattacaacctctgccttctgggctcaagggattctcctcctgcctcagcctccctagtagctgggattacaggcacctgccaccacgcccagctaatttttgtattttaa------------------------------------------------------------gtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccaacctcaagtgat------------------------------ctgcccacgtctgcctcccaaagtgctgggattacaggcatgagccactgcgccGTGCCTGGCCTGCAT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890864 315 + 64156825 CTATCC----ttttttt--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgccc--------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcgccGTGCCCGGCCTGCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908055 318 + 59248254 CTATCC---tttttttt--------tttttttttgagacagagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgcccaccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccatgttggccagactggtctcgaactcctgacctcaagtgat------------------------------ccgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcgccGTGCCCGGCCTGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026558 312 + 51301725 ctatcc---------ct--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgcccaccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccatgttggccagactggtctcgaactcctgacctcaagtgat------------------------------tcgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcaccgtgcccagcctgcat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740530 320 + 50890351 CTATCCtt-tttttttt--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtggcacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcttcagcctccctagtagctgggattacaggtgcccgccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccattttggccagactggtctcaaactcctgacctcaagtgat------------------------------ccacccacctctgcctcccaaagtgctccgattacaggcgtgagccaccgcaccgtgcccggccTGCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19474841 0 - 122678785 C e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=4011.000000 s hg38.chr19_GL949748v2_alt 31532 2 + 1064304 CT s panTro4.chr19 58968317 2 + 63644993 CT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891179 2 + 64156825 CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908373 2 + 59248254 CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026870 2 + 51301725 cT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740850 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474841 2 - 122678785 CT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=145492.000000 s hg38.chr19_GL949748v2_alt 31534 71 + 1064304 ATCTTTTTGTCTCCTAGATTCCTTCTTCCCCAGCCATGTCCCACGACAG---GAAAAGAAATACGTGCATCAGG s panTro4.chr19 58968319 71 + 63644993 ATCTTTTTGTCTCCTAGATTCCTTCTTCCCCAGCCATGTCCCACGACAG---GAAAAGAAATACGTGCATCAGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891181 71 + 64156825 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---GAAAAGAAATACGTGCATCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908375 71 + 59248254 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---GAAAAGAAATACGTGCATCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026872 71 + 51301725 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCATGTCCCacaacag---gaaaagaaatacGTGCATCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740852 71 + 50890351 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---TAAAAGAAATACGTGCATCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318690 74 + 49145316 ATGTTTTTGTCTCCTGGGTTCCTTCCTTCCCAGTCACATCCCCCAACAGAAAAAAAAAAAAAACTCACATCAgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19474843 71 - 122678785 GTCTTTTTGTTTCCTGGATTCTTCTTTCACCAACCAGGCTCCATCACAA---GAAAAGGACTATATGCCTCAAG i canFam3.chr1 C 0 I 8 e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=4011.000000 s hg38.chr19_GL949748v2_alt 31605 2 + 1064304 CA s panTro4.chr19 58968390 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891252 2 + 64156825 CA i rheMac3.chr19 C 0 I 397 s macFas5.chr19 54908446 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026943 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740923 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318764 2 + 49145316 ca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=146770.000000 s hg38.chr19_GL949748v2_alt 31607 110 + 1064304 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa s panTro4.chr19 58968392 110 + 63644993 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 54908448 110 + 59248254 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagactagcctgggcaacat----agatcctgtctcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026945 110 + 51301725 GGCtttggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740925 110 + 50890351 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggaaggaggatcacctgaactcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318766 114 + 49145316 ggcctcggtgactcaagtctgtaatcccagcactttgagaggccaaagcagaaggataacctgagctcaggagttcaagaccagcctgggcaatatagagagatcctgtctcaa i calJac3.chr22 C 0 I 926 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e rheMac3.chr19 59891254 397 + 64156825 I a score=426628.000000 s hg38.chr19_GL949748v2_alt 31717 458 + 1064304 caagtaatttaaaaattagccaggcatggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaatcgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggtgacagagcgagattctgt--caaaaaaaaaaaaa---------GCA-----gccgagcgcagtggctcactcctgtaatctcagcactttgggaggctgaggtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctggccaacatggtaaaaccctgtctctactaaaatacaaaaattagccaggtgtggtggcgcacccctgtagttccagctactcgggaggctgaggcaggtgaattgcatgaacccaggaggcgggggttgcagtgagctgagatcatgccactgtactccagcctgggcaacagagcaagactccctctc s panTro4.chr19 58968502 456 + 63644993 caagtaatttaaaaattagccaggcacggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggtgacagagagagattctgt--caaaaaaaaaaa-----------GCA-----gccgagcgcagtggctcactcctgtaatctcagcactttgggaggctgaggtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctggccaacatggtaaaaccctgtctctactaaaatacaaaaattagccgggtgtggtggcgcacccctgtagttccagctactcgggaggctgaggcaggtgaattgcatgaacccaggaggcgggggttgcaatgagctgagatcatgccactgtactccagcctgggcaacagagcaagactccctctc i panTro4.chr19 C 0 C 0 s macFas5.chr19 54908558 460 + 59248254 caaatactttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgtgcatgccactgcactcctgcctgggcgacagagcgagattctgt--caaaaaaaaaaaaaaaaacaaaaacaaaaCCGCCAAGCGCAGTGGC------------tcccagcactttgggaggctgagatgggcagatcacttgaggtcagcagttcgagat-------------------------------cagtctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtgcacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggcggagattgcagtgagctgagatcatgccactgcactctagcctaggcgacagagcaagactgcctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027055 467 + 51301725 caaatactttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctgcttgggaggctgatgtgggaaaattgcttgagcctgggaggttgaggctgcagtgaattgtgttcatgccactgtactcctgcctgggcgacagaacgagattctgt--caaaaaaaaaaaaa-----aaaaacaaagcagccaagcgcagtggcttactcccgtaatcccagcactttgggaggctgaggtgggcagatcacttgaggtcagcagtttgagat-------------------------------cagcctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtccacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggcggagattgcaatgagctgagatcacgccactgcactccagcctaggcgacagagcaagactgcctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741035 464 + 50890351 caaataatttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggcgacagagcaagattctgtaccaaaaaaaaaaaaa-----aaaGACA-----gccaagcgcggtggcttactcccgtaatcccagcactttgggaggctgatgtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtccacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggtggagattgcaatgagctgagatcatgccactgcactccagcctaggcgacagagcaagactgcctctc i chlSab2.chr6 C 0 I 2703 s calJac3.chr22 45319806 421 + 49145316 caaaaAAAC--AAAAGCAgccaggcacagtggctcactcctgtaattcccgcaatttgggaggctgaggcaggcaaatcatgtgaggtcaggagttcaaaa-------------------------------tcagcctcactaacatggtgaaaccctac--taaaatacaaaaat----------ta-----gctgggtgtggtggcacagccctgtagtcccagctactcgggaggctgaggtag---aagtgcttgaactcaggaggtggaggtttcagtaagctgagattgtgtcactgcactccagcttgggagacagagcaagacaaccactcaaaaaaaaaaaaaaaaaTGGTTTGGAGAggtggctcacacgtgttaatcccgccctttgggagcctgtggtgagtggatcacctgaggtcaggagtttgagat-------------------------------cagcctcaccagtatggtgaaacctcatctc i calJac3.chr22 I 926 I 5 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e rheMac3.chr19 59891254 397 + 64156825 I a score=8898.000000 s hg38.chr19_GL949748v2_alt 32175 27 + 1064304 aaaaaaaaaaaaaag-------------gctgggtgtgga s panTro4.chr19 58968958 32 + 63644993 aaaaaaaaaaaaaaaaaa--------aagctgggtgtgga i panTro4.chr19 C 0 C 0 s macFas5.chr19 54909018 29 + 59248254 aaaaaaaaaaaaaaa-----------aTgccgagcacggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027522 40 + 51301725 aaaaaaaaaaaaaaaaaaaaaaaaacacgccgggcactgt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320232 27 + 49145316 --aaaaacaaaaatt-----------gggccaggcgaggt i calJac3.chr22 I 5 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I e rheMac3.chr19 59891254 397 + 64156825 I a score=100170.000000 s hg38.chr19_GL949748v2_alt 32202 87 + 1064304 ggttcacgtttataatcccagccctttgggaggccgaggcagatggatcacttgaggtcaggagtttgagatcaacctcaccaatat s panTro4.chr19 58968990 87 + 63644993 ggttcacgtttataatcccagccctctgggaggccgaggcagatggatcacttgaggtcaggagtttgagatcaacctcaccaatac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891651 87 + 64156825 ggttcacgtttgtaatcccagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaccagtat i rheMac3.chr19 I 397 C 0 s macFas5.chr19 54909047 87 + 59248254 ggttcacgtttgtaatcccagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaccagtat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027562 87 + 51301725 ggttcacgtttgtaatcctagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaCCAGTAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320259 84 + 49145316 ggctcacacctgtaatcc-agcactttgggaggccaaggcggatggatcac--aaggtcaagagatcgagaccatcctagtcaacat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I a score=183878.000000 s hg38.chr19_GL949748v2_alt 32289 124 + 1064304 ggtacaacctcatctttattaaaaatacaaaaatta-ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggcggaggcaggtggatcac--aaggtcaggagatggaga-------------------------------ccatcc s panTro4.chr19 58969077 124 + 63644993 ggtataacctcatctttattaaaaatacaaaaatta-ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--aaggtcaggagatggaga-------------------------------ccatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55835751 125 + 60714840 GGTATAACCTCGTCTTTATTAAAAATACAAAAATTACCgctgggcgcggaggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggaccac--gaggtcaggagatggaga-------------------------------ccatcc i ponAbe2.chr19 M 1306 C 0 s rheMac3.chr19 59891738 124 + 64156825 ggtacaaccacgtctttattaaaaatacaaaaatta-ggccaggctcggtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcac--gaggttaggagatggaga-------------------------------ccatcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909134 124 + 59248254 ggtacaaccacgtctttattaaaaatacaaaaatta-ggccaggctcggtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcac--gaggttaggagatggaga-------------------------------ccatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027649 124 + 51301725 GGTACAACcacgtctttattaaaaatacaaaaatta-ggccaggcgcggtggctcacacctgtaatcccagcactttggaaggccaaggcaggcggatcac--gaggtcaggagatggaga-------------------------------ccatcc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320343 156 + 49145316 ggtgaaaccctgtctgtagtaaaaatacaaaaatta--gctgggcatggtggcgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I a score=471255.000000 s hg38.chr19_GL949748v2_alt 32413 226 + 1064304 tggctaacatg-gcgaaaccccatctctacta--------------aaaacacaaacaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggagggagaattgcttgaacccaggaggcagaagttgcagtgagccgagatcgtgccactgcactccagcctgggagacacagcaagactctgtctta----aaaaaaaaaaa----------------gcaaaGCCAAACCAAAGAAAT s panTro4.chr19 58969201 240 + 63644993 tggctaacatg-gcgaaaccccatctctacta--------------aaaacacaaacaattagccgggcgtggtggcgggcgcctgtagtcccaactactcgggaggctgaggagggagaattgcttgaacccaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagcctgggagacacagcaagact--gtctta----aaaaaaaaaaaaaaaaaaaaaaaaaaaGCAAAGCCAAACCAAAGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55835876 226 + 60714840 tggctaacatg-gtgaaaccccatctctacta--------------aaaacacaaacaattagccaggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcgggaggattgcttgaacccaggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggtgacacagcaagactctgtcttt----aaaaaaaaaaa----------------gcaaagcaaaaccaaagaaaT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59891862 237 + 64156825 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcgtggtggcgggagcctgtagtcccagctactcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcccaggcgacagagcaagactctgtcttg--aaaaaaaaaaaaa------ggaaaaaaaaacaaaGCAAAACCGAAGAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909258 235 + 59248254 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcgtggtggcgggagcctgtagtcccagctactcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcccaggcgacagagcaagactctgtcttg----aaaaaaaaaaa------ggaaaaaaaagcaaaGCAAAACCGAAGAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027773 235 + 51301725 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcatggtggcgggagcctgtagtcccagctactcgggaggctgcggaggaagaactgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcgacagagcaagactctgtcttg----aaacaaaaaaa------ggaaaaaaaagcaaagcaaaaccgAAGAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744202 238 + 50890351 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aaatagccgggcgtggtggcaggagcctgtagtcccagc-actcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggtggcagaacaagactctgtcttgaaaaaaaaaaaaaaa------gaaaaaaaaaGCAAAGCAAAACCGAAGAAAT i chlSab2.chr6 I 2703 C 0 s calJac3.chr22 45320499 231 + 49145316 tgggtaacaagagcgaaactccatctcaaaaaaaagaaaagaaaagaaaatacaaa-aactagccgggtgtggtg---ggcacttgaaatcccggctactcaggaggctgaggtaggagaatggcttgaatgcaggaggcagaggttgcagtgggcca----------actgcactccagcctgggcgacagagcgagactctatctca----aaaaaaaaaaa----------aaaaaagcaaaGCCAAACCAAAGAC-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=42582.000000 s hg38.chr19_GL949748v2_alt 32639 15 + 1064304 GTGTGCATCAAAGAG s panTro4.chr19 58969441 15 + 63644993 GTGTGCATCAAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836102 15 + 60714840 GTGTGCATCAAAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102598815 15 - 106955855 GTGTGCATCAAAGAG i nomLeu3.chr10 I 717 C 0 s rheMac3.chr19 59892099 15 + 64156825 GTGTGCATCAAGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909493 15 + 59248254 GTGTGCATCAAGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028008 15 + 51301725 GTGTGCATCAAGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744440 15 + 50890351 GTGTGCATCAAGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320730 14 + 49145316 GTGTGTATCAA-GAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I a score=1852457.000000 s hg38.chr19_GL949748v2_alt 32654 571 + 1064304 TACAT------CTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTCGTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAA---AGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAACGTATGACTAGCTCTTTATAGGTCTGAGatatatatatatatata--------atgt---------------------------------------------------------------------------------atatatgtatt s panTro4.chr19 58969456 586 + 63644993 TACAT------CTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGCTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTCCTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCGGAGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------ATATAATTTCAGACGATTAAAGGAAAAAGGTCATGAGGAGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACAAGCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAACGTATGACTAGCTCGTTATAGGTCTGAGatatatatatatatatatatgtgttatgt---------------------------------------------------------------------------------atatatgtatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836117 580 + 60714840 CACATCTGAAGCTGCCCTTCTTACCTGTGACCACCAGCTGCAAGCGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTGGTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTTGTTCACCTTGCACAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCCCGGCTTCAACCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAATGTATGACTAGCTCGTTATAGGTCTGAGatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102598830 572 - 106955855 TACATCTGAGGCTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCTGTGAAGGGGAATTCGGCTTCATTTTGTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCG-AGCTGGGCCAGGCATGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAGAATTATGTGCTTGTCCCTGAGTACAAATCCAGCAGAGAACATATGACTAGCTCGTTATAGGTCTGAGatatagatatatgtatt-------------------------------------------------------------------------------------------------atgtatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892114 576 + 64156825 CACATCTGAGGCTA-CTTTCTCACCTGTGATCACCAGCTCCAAGTGTTCACTGCTTTCTGACCCCTCACGGGAGGCTGTTGTCTTATAGGCACAAAAGTAGCTCCCAGCATCCTCAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCAAGAACTGTTCCTGCTTGTACCCAGAGTCATTCACCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACCG-AGCTAGGCCAGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909508 576 + 59248254 CACATCTGAGGCTA-CCTTCTCACCTGTGATCACCAGCTCCAAGTGTTCACTGCTTTCCGACCCCTCACGGGAGGCTGTTGTCTTATAGGCACAAAAGTAGCTCCCAGCATCCTCAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCGAGAACTGTTCCTGCTTGTACCCAGAGTCATTCACCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACCG-AGCTAGGCCGGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028023 658 + 51301725 CACATCTGAGGCTACCCTTCTCACCTGTGGTCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTAGCTCCCAGCATCCTTAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCGAGAACCGTTCCTGCTTGTACCCAGAATCATTCACCTTGCGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACTG-AGCTAGGCCGGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGATAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAggaataaataaagtttaaatgggagaaaactcaccattctttttctcatcttcgTAGCCCAGACACA-GTCCTGGAAGAGAAATCTcaatgagagaaaaattatgtgctTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAggtct--aatatatatatatgtatt--------atgtatatatgtattatgtatatatgtattatgtatatatgtgtacatatagttacacatatgtatatatgtattatatatatgtatatatgtatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744455 577 + 50890351 CACATCTGAGGCTACCCTTCTCACCTGTGATCACCAGCTGCAAGCGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTAGCTCCCAGCATCCTTAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTTTTCTGTCGAGAACTGTTCCTGCTTGTACCCAGAGTCGTTCTCCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCCTCAACCACCG-AGCTAGGCCAGGCGTGGAGGGAGGGTTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTCATTTGAGT----------------------------CTAGAATT-CAGACAATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320744 584 + 49145316 CGCCTCTGAGACGGCCCTTCTCACCTGTGACCACCAGCTGCACGTGCTCACTGCTTTCTGACCACTGGTGGGAGACTGCTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTGGGCTTCAAGTGCATGAAGGGGAATTCCGCTTCGCTTCCTGCCGAGCTCTGTTCGCGCTGGAATGCAGAGTCGTTCACCTTGCGCAGCGTGAATGTCACATTCTGGGAAGGAGCCCGACACTTCAGGGTCACGTTGCTCTTGGCTTCAGCCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGACAGTTTCTCTGG-AAAGAATTCAGAGTTAATTCGAGTCTGCATGTGGATG-------------GCCTGGAATT-CAGAGGATTCAAGAAAAA-GGTCATGAAATGTGGGGTGCAGGAATAA----AGTGTAAGTGGGAGAAAACTCACCGTTCTCTTTGTCATCCTCATAGCCCAGACACA-GCCCTGGAAGAGAAATGTCAAT--GAGAAGAATTACGCACTTGTCTTCGAGTACAAATCCAGCAGAGAAATCATGACCAGCTCGTTACAGGTCT--GATATGTATATA---ATA--------ATGC---------------------------------------------------------------------------------ATGTATTTtat i calJac3.chr22 C 0 C 0 s canFam3.chr1 19474922 598 - 122678785 ------TGAAGCTGCCTTTCTCACCTTTGACCTGCAGCCACAGGTGTTCACTCTCTTCTGACCACTCCTGGGAGACCATTGTCTTGTAGGCACAAAAGTACATCCCAGCATCCTTCGGCTCCAGGTGAGTGAGGAGGAATTCAGCCTCATGTCCTGTGGATCTCTGCTCCTGCCTGTACCCAGAGTCCTGCAGCTTCCCCAGCATGAATGTCACATTCTGGAAGTGAGACTGGCACCTGAGGCTCACGTTGCCTCTGTGTTCAACCATGT-TGCTGGGCAAGGCACTGAGCGTGGGTTTGGGAAGCATTTCTGGCAAAGAATTCAGAGTTAGTCTGACTCTTCATCATGACATCCACCAATGCCCTCCTAGAATT-CAGAGGATTAAAGAGAAA----------ATATAGGATGCAGGAACAGATAGAGTTTA--TGCGAGAAAACTCACCATTCTTTTTCTCGTCTTCAAAGCCCAGGGAAA-GCCCTGGAAGAGAAACCCTTATGAGACATAAATTACATACTCGTGTTTGAGTATATATCAGGCAGAGAGTGCATGACTAATTTGTTAAAGATCC--ATCTTATTTCTTTtttcttttaaagatttt---------------------------------------------------------------------------------atttatttatt i canFam3.chr1 I 8 I 134 a score=111275.000000 s hg38.chr19_GL949748v2_alt 33225 74 + 1064304 atatata-ataaat--------------------------gtattaagtatatgtacacatattacatata---atacatatataaatataatatatatattaa---- s panTro4.chr19 58970042 70 + 63644993 atatata-ataaat--------------------------gtattaagtata----cacatattacatata---atacatatataaatataatacatatattaa---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836697 74 + 60714840 atatata-ataaat--------------------------gtattaagtatatgtacacatattacatata---atacatatataaatataatacatatattaa---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599402 74 - 106955855 atatata-ataaat--------------------------atattaaatgtatgtacacatattatacata---atacatatataaatataatacatatattaa---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892690 67 + 64156825 atacata-atacat--------------------------atattaac--tatgtacacatattacatata---atacatatataaatat-----atctattaa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910084 67 + 59248254 atacata-atacat--------------------------atattaac--tatgtacacatattacatata---atacatatataaatat-----atctattaa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028681 95 + 51301725 atacata-atacatatgtatatatgtataatacataatacatataaactatatgtacacatattacatata---atacatatataaatat-----atctattaa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745032 57 + 50890351 atacata-at------------------------------atattaactctatgtacat---------------gtacatatataaatat-----atctattaaatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321328 71 + 49145316 aaatgtacatacat--------------------------ata-------tatgcagatataatatagatatacataaatgcatatatgtgaattatatattat---- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475520 134 - 122678785 I a score=279390.000000 s hg38.chr19_GL949748v2_alt 33299 123 + 1064304 atatatgtattacatatatgtatatatTTTTGGCAGATATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCC-AGCAAC---ttcttc- s panTro4.chr19 58970112 125 + 63644993 atatatgtattacatatatgtatatatTTTTGGCAGATATCTCCCCAGACTTA---------CCTCTTACTTTTGGTTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCCCAGCAAC---ttcttc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836771 123 + 60714840 atatatgtattacatatatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCC-AGCAAC---TTCttc- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599476 122 - 106955855 acatatgtattacatatatgtatatatTTTTGGCAAATATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTAGGTGTATGGAGAAAATTCC-AGCAAC---ttctt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892757 121 + 64156825 atgtatgtattacatgtatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAA----tttt-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910151 122 + 59248254 atgtatgtattacatgtatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTTTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAA---ttttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028776 125 + 51301725 atgtatgtattacatgtatgtatatatttttggcagCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATtcc-agcaactttttttt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745089 122 + 50890351 atgtatgtattacctgtatgtatatatTTTTGGCAGATGTCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCTATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAC---ttttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321399 64 + 49145316 atatttatattatgta-----atatatt------aaatgt------agacata-----------------tttta-------------------------cacatatatatat---atttt----------ttatt-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19475654 129 - 122678785 acgtaggtgttccATCCATCT---TATTTCTTGAAGGCACTTCTTTGGGTTGATTTTTTTAACCTGTTACTTATG-TCCCATTGTTTCTCATTTTGTATATTCATTTATATACAAAATTCC-AGCAAC---CTTTT-C i canFam3.chr1 I 134 C 0 a score=58119.000000 s hg38.chr19_GL949748v2_alt 33422 34 + 1064304 tttcttttttttttttttttttt---gaaatgtagtc s panTro4.chr19 58970237 30 + 63644993 tttcttttttttttttttttttt----aaatgt---c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836894 37 + 60714840 tttctttcttttttttttttttttttgaaatgtagtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599598 26 - 106955855 --------tcttttttttttttt---gagatgtagtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892878 26 + 64156825 --------tttttttttcttttt---gagatgtagtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910273 26 + 59248254 --------tttttttttcttttt---gagatgtagtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028901 26 + 51301725 --------tttttttttcttttt---gagatgtagtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745211 26 + 50890351 --------tttttctttcttttt---gagatgtagtc i chlSab2.chr6 C 0 T 3728 s calJac3.chr22 45321463 26 + 49145316 --------ttttttttatttttt---gaaacggagtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C a score=118469.000000 s hg38.chr19_GL949748v2_alt 33456 40 + 1064304 ttgctc-tgttgcacaggctggagtgcaatgacatgatctc s panTro4.chr19 58970267 40 + 63644993 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836931 40 + 60714840 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599624 40 - 106955855 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892904 40 + 64156825 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i rheMac3.chr19 C 0 I 222 s macFas5.chr19 54910299 40 + 59248254 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028927 40 + 51301725 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741509 40 + 50890351 ttgctc-tgtcgcctaggctggagtgcagtggcatgatctc i chlSab2.chr6 T 3728 C 0 s calJac3.chr22 45321489 41 + 49145316 tcgctcttgttacccaggctggagtgcaatggcgagatctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C a score=496418.000000 s hg38.chr19_GL949748v2_alt 33496 233 + 1064304 agttcactgcaacctccgcctcccaggttcaagcaattttcctgcctcagcctcccgagtagctgggactacag--gcacccgccaccacacctggctaatttttgcatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcccccggc-cCA s panTro4.chr19 58970307 233 + 63644993 agttcactgcaacctccgcctcccaggttcaagcaattttcctgcctcagcctcctgagtagctgggattacag--gcacccgccaccacgcctggctaatttttgtatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcccccggc-cCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836971 233 + 60714840 agttcactgcaacctccgcctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggactatag--gcacctgccaccacacctggctaatttttgtatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgcgaggattacaggcgtgagccaccgctcccggc-cCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599664 233 - 106955855 agttcactgcaacctccgcctcccaggttcaagcgattttcctgcctcagcctcctgagtagctgggactacag--gcacccgccaccacgcctggctaatttttatatttttagtagagag-agggtctcaccatgttggccaggctggtcttgaactcctgacctcagttgatccacacgcctcagcctcccaaagtgctgggattatagacgtgagccaccgtgcccggc-cCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54910339 231 + 59248254 agttcactgcaacctccgcctcccaggtttaagtgattctcctgccttagcctccccagtagctgggactacag--gcgcccaccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgaactcctggcctcaggtgatccgcctgcctcggactcccaaagttctgggattacaggtacgagctaccgcacctggc---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028967 231 + 51301725 agttcactgcaacctccgcctcccaggtttaagtgattctcctgccttagcctcccgagtagctgggactacag--gcgcccgccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgaactcctggcctcaggtgatccgcctgccttggcctctcgaagttctgggattacaggtacgagctaccgcacctggc---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741549 232 + 50890351 agctcattgcaatctccacctcctgggttcatgtaattcacctgccttagcctcccgagtagctgggactacag--gcgcccgccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgagctcctggcctcaggtgatccgcctgcctcggcctcccaaagttctgggattacaggtacgagctaccgcacctggcc--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321530 233 + 49145316 agctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctccgcctcccaagtagctgagattacaggcgcgcacgccaccatgcccagctaatttttgtatttttagtagagac-ggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcagcctcccaaagtgctgggattacaggcttgagccactgcgcccagc-cTa i calJac3.chr22 C 0 I 1387 e canFam3.chr1 19475783 0 - 122678785 C e rheMac3.chr19 59892944 222 + 64156825 I a score=5001.000000 s hg38.chr19_GL949748v2_alt 33729 10 + 1064304 GCAACCTTTT s panTro4.chr19 58970540 10 + 63644993 GCAACGTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837204 10 + 60714840 GCAACCTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599897 10 - 106955855 GCAACCTTTT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46741781 0 + 50890351 C e papAnu2.chr19 47029198 0 + 51301725 C e macFas5.chr19 54910570 0 + 59248254 C e rheMac3.chr19 59892944 222 + 64156825 I a score=2100.000000 s hg38.chr19_GL949748v2_alt 33739 1 + 1064304 C s panTro4.chr19 58970550 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837214 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599907 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59893166 1 + 64156825 c i rheMac3.chr19 I 222 C 0 s macFas5.chr19 54910570 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029198 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46741781 0 + 50890351 C a score=264207.000000 s hg38.chr19_GL949748v2_alt 33740 98 + 1064304 TGATGTATTGAATTGCTTTCATGAGTAATC---CTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG---------TG s panTro4.chr19 58970551 98 + 63644993 TGATGTATTGAATTGCTTTCACAAGTAATC---CTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG---------TG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837215 106 + 60714840 TGATGTATTGAATTGCTTTCATGAGTAATCCATCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG----ttttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599908 101 - 106955855 TGATGTATTGAATTGCTTTCACGAGTAATCCTTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAG---------TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59893167 110 + 64156825 TGATGTATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910571 110 + 59248254 TGATGTATTGAATTGCTTTCACAAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029199 110 + 51301725 tgatgtATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTatgcttttttcttgtattttctgtgattgcagtattttgtttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741781 110 + 50890351 TGATGTATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19475783 97 - 122678785 TGATCTATCATGTTGCTTTCACG----ATCAGTCTTTCACCATCTAAATATCATCACATATTTACTTGTATTTTCCTCTCCTGCTTTCTATGACTGAACTC--------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45321763 1387 + 49145316 I a score=444076.000000 s hg38.chr19_GL949748v2_alt 33838 195 + 1064304 ttttgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcagtctcagctcactgcaacctcctccaccccctgggttcaagtgatactcgtacctcaggctccagagtagctgggactacaggtgtgtgccatcgtgcccagctaatttttgttgttgttgt------------------------tgtagagatgggg s panTro4.chr19 58970649 192 + 63644993 ttttgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccccctgggttcaagtggtactcgtacctcaggctccagagtagctgggactacaggtgtgtgccatcgtgcccagctaatttttgttgttgttgt---------------------------agagatgggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837321 219 + 60714840 tttcgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccccctgggttcaagtgatactcgtacctcagggtccagagtagctgggactaccggtgtgcgccatcacgcccagctaatttttgttgttgttgttgttgttgttgttgttgttgttgttgtagagatgggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102600009 198 - 106955855 ttttgttttgttttgagacagagtctcactgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccctctgggttcaagtgatacccgtacctcaggctccagagtagctgggactacaggtgtgtgccatcatgcccagctaatttttgttgttgttgt---------------------tgttgtagagatgggg i nomLeu3.chr10 C 0 M 1769 s rheMac3.chr19 59893277 195 + 64156825 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgtggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattcttgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaattgttgttgttgttgt------------------------tgttgagatgggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910681 192 + 59248254 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgtggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaa---ttgttgttgttgt------------------------tgttgagatgggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029309 195 + 51301725 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgcggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaattgttgttgttgttgt------------------------ttttgagatgggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741891 186 + 50890351 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgcggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcatacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaa---------ttgttgt------------------------tgttgagatgggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19475880 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I a score=211757.000000 s hg38.chr19_GL949748v2_alt 34033 117 + 1064304 tttcaccatgttgcccaggctggtctcaaactcctgagctcaagtgatccacccgcctcagcctcccaaagcgctgggattacaggcatgagccaccgtgcccggccTGATTGCAGT s panTro4.chr19 58970841 117 + 63644993 tttcaccatgttgcccaggctggtctcaaactcctgagctcaagtgatccacccgcctcagcctcccaaagcgctgggattacaggcatgagccactgcacacggccTGATTGCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837540 117 + 60714840 tttcgccatgttgcccaggctggtctcaaactcctgagctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgagaaaccgcgcccagccTGATTGCAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59893472 117 + 64156825 tttcaccatattgcccaggctggtctcaaactcctgacctcaagtgatccgtctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgaccTGATTGCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910873 117 + 59248254 tttcgccatattgcccaggctggtctcaaactcctgaccgcaagtgatccgtctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgaccTGATTGCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029504 117 + 51301725 tttcgccatattgcccaggctggtctcaaactcctgacctcaagtgatccatctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgacctgaTTGCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742077 117 + 50890351 tttcgccatattgcccaggctggtctcaaactcctgacctcaagtgatccatctgcctcagcctcccaaagtgctgggattacaggcatgagtcaccgtgcccgaccTGATTGCAGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19475880 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=75688.000000 s hg38.chr19_GL949748v2_alt 34150 45 + 1064304 TTT-ACCCTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GA s panTro4.chr19 58970958 46 + 63644993 TTTTACCGTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837657 46 + 60714840 TTTTACCCTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59893589 46 + 64156825 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCGTGGA---- i rheMac3.chr19 C 0 I 4 s macFas5.chr19 54910990 44 + 59248254 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCGTG------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029621 44 + 51301725 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCATG------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742194 46 + 50890351 TTTTACCCTTGCCACTTAAATAATGCAAACA----TTATTTTCCCGTG--GA-- i chlSab2.chr6 C 0 I 4 s canFam3.chr1 19475880 49 - 122678785 -TTCACCTTTGTCACTTAGATAACGCAATGGTTATTTATTTTACTGTG----GA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=2166.000000 s hg38.chr19_GL949748v2_alt 34195 3 + 1064304 GTG s panTro4.chr19 58971004 3 + 63644993 GTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837703 3 + 60714840 GTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54911034 1 + 59248254 --G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029665 1 + 51301725 --G i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19475929 3 - 122678785 GTG i canFam3.chr1 C 0 I 1 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=910.000000 s hg38.chr19_GL949748v2_alt 34198 1 + 1064304 A s panTro4.chr19 58971007 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837706 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54911035 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029666 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19475932 1 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=33669.000000 s hg38.chr19_GL949748v2_alt 34199 155 + 1064304 GAGTGGTGGGttttttttttt-----------------------------------------tttttatttttcgagatggagtctcgctctgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaagctctgcctcccgggttcacgccattctcctgcctcggcctcccgagtagctgggacta s panTro4.chr19 58971008 156 + 63644993 GAGTGGTGGGttttatttttta----------------------------------------tttttatttttcgagatggagtctcgctctgtcacccaggctagagtgcagtggcacgatctcggctcaccgcaagctctgccttccgggttcacgccattctcctgcctcggcctcccgagtagctgggacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837707 195 + 60714840 GAGAGGTAGGTtttattttttgtatttatttatttatttatttatttatttatttatttatttatttattttttgagacggggtctcgctctgtcacccaggctggagtgaaatggctcgatctcggctcattgcaagctctgcctcccgggttcacaccattctcctgcatcaacctcacgagtag-tgggacta i ponAbe2.chr19 C 0 I 1515 e canFam3.chr1 19475932 1 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e papAnu2.chr19 47029667 0 + 51301725 C e macFas5.chr19 54911036 0 + 59248254 C e rheMac3.chr19 59893635 4 + 64156825 I a score=14920.000000 s hg38.chr19_GL949748v2_alt 34354 164 + 1064304 caggcacccgccaccaagcccagctaattaatttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggactcccaaagtgctgggattacaggcatcagccaccgcgcccggcc s panTro4.chr19 58971164 164 + 63644993 caggcacccgccaccacgcccaggtaattaatttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctcggactcccaaagtgctgggattacaggcatcagccaccgcgcccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19475932 1 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e papAnu2.chr19 47029667 0 + 51301725 C e macFas5.chr19 54911036 0 + 59248254 C e rheMac3.chr19 59893635 4 + 64156825 I a score=1704.000000 s hg38.chr19_GL949748v2_alt 34518 4 + 1064304 GAGA s panTro4.chr19 58971328 4 + 63644993 GAGA i panTro4.chr19 C 0 C 0 s macFas5.chr19 54911036 4 + 59248254 AAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029667 4 + 51301725 AAGG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19475933 4 - 122678785 GAGC i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=141927.000000 s hg38.chr19_GL949748v2_alt 34522 92 + 1064304 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTCCCAAATACTCTCCTCACTTTAGCTTTGG s panTro4.chr19 58971332 92 + 63644993 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTCCCAAATACTCTCCTCACTTTAGCTTTGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59893639 92 + 64156825 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i rheMac3.chr19 I 4 C 0 s macFas5.chr19 54911040 92 + 59248254 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029671 92 + 51301725 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATctgctcccccttccccatgtCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742244 92 + 50890351 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19475937 116 - 122678785 AGAGGGTTTCCTCTCT-GATTCAAATGGGGAGAAACCACTCTCTCTGCCCAGGTTCTTCTTTTCATGAAGAATTTGAGACATTCATGGTCCTAAATGCCCTTTCCA-TGTGGCTTTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=690955.000000 s hg38.chr19_GL949748v2_alt 34614 360 + 1064304 TTTCCACTTACATTATCCCCTCCCTCTTCTGTGTTCTGTTCTCTACATTCCCCGCTGGGAAGGTAGCGTCTTAAACTTGGGTGGAAA-ATGGGATGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTACGTAGAATTTAGGTAGAAATTCTCTAGA-GCCACGACAGTGTCTCAGGACATTGGTTCCTTGTT--GACACAGGTGCCGATACAG-AACGTGACCCCCCACCAAGCTTCACCACAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAAGCTGCGTTGGCAGCGAGATTAGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGGTGGGCAGGGCATCCCAGGACTCAGGCTCTGTTTT s panTro4.chr19 58971424 360 + 63644993 TTTCCACTTACATTATCCCCTCCCTCTTCTATATTCTGTTCTCTACATTCCCTGCTGGGAAGGGAGCGTCTTAAACTTGGATGGAAA-ATGGGATGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTACGTAGAATTTAGGTAGAAATTCTCTAGG-GCCACGACAGTGTCTCAGGACATTGGTTCCTTGTT--GACACAGGTGCCGATACAG-AACGTGACCCCTCACCAAGCTTCACCACAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAAGCTGCGTTGGCACCGAGATTAGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGGTGGGCAGGGCATCCTAGGACTTAGGCTCTCTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602001 360 - 106955855 TTTCCACTTACATTATCCCCTCCCTCTTCTGTGTTCTGTTCTCTACATTCCCCGCCGGGAACGGAGCGTCGTAAACTTGGGTGGAAA-ACGGGATGTCAGTCATGGGGCTTGTTTCA-GGTGAAGTTACCTAGAATTTAGGTAGAAATTCTCTAGA-GCCACGAGAGTGTCTCAGGACATTGGTTTCTTGTT--GACACAGGTGCCGATGCAGAAACGTGACCCCCCACCAAGCTTCACCGCAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAGGCTGTGTTGGCAGCGAGATTCGCTGGGATTGGCAGGTAGGAAACAGCCTCTGCGTGGGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i nomLeu3.chr10 M 1769 C 0 s rheMac3.chr19 59893731 351 + 64156825 TTTCCACTTACATCATCCCCTTTCTCTTCTATGTTCTGTTCTCTATATTCCCTGCGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTGAGGTAGAATTTCTCTAGA-GCCA-------GTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGACTGGGATTGGCAGGTAGGAAACAGCCTCTGAAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911132 351 + 59248254 TTTCCACTTACATCATCCCCTTTCTCTTCTATGTTCTGTTCTCTATATTCCCTGCGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCA-------GTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGACTGGGATTGGCAGGTAGGAAACAGCCTCTGAAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029763 358 + 51301725 TTTCCACTTACATCATCCCCTCCCTCTTCTATGTTCTGTTCTCTATATTCCCTGTGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCACGAGAGTGTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAAATTGGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742336 357 + 50890351 TTTCCACTTACCTCATCCCCTCCTTCTTCTATGTTCTGTTCTCTATATTCCCTGTGGAGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCA--CGAGTGTCTCAGGACGTTGGTTCCTTGTT--GACACAGGTACCGAGGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGAGGCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19476053 342 - 122678785 TCTATATAAATGTTAGACCCTACTTCTCCTGTGTTCTGTTCTATGCATTTCATTCTGGAATAGAAAGGTCAT-TTCATGAATGGAAATATGGGAAACTAGTCTTGGGGTATGTCAAGAGGTGATGT---------------TAGAATTTCTCTAGATGCCA---GAGTGTCTCAGGATATCTGGCCTTTCTTTAAACTCAGGAGTCAACTCAC-AACATGGACCC---TCAAACTTCACCAAGAAGGAAGGAGATGGTGGCCTGATGATGCACTGAGTCTGAGTTTGCAGTAATAATGGTGGGAATTTGTAGTAGGAAAGCATCCTCTGGGTGGTCAGGGGGTCGTAGGTCTCATGGTCCCTTtt i canFam3.chr1 C 0 I 380 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=8022.000000 s hg38.chr19_GL949748v2_alt 34974 4 + 1064304 GAGA s panTro4.chr19 58971784 4 + 63644993 GAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602361 4 - 106955855 GAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894082 4 + 64156825 GAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911483 4 + 59248254 GAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030121 4 + 51301725 GAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742693 4 + 50890351 GAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476395 380 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=178310.000000 s hg38.chr19_GL949748v2_alt 34978 82 + 1064304 CCCTCCCCA-AATCCCGCTTTTAGATTCATGTCATCTCATCTCTGCTATCCACCCATCGTCTGTTCAAACAGTGATTCCTATA s panTro4.chr19 58971788 82 + 63644993 CCCTCCCCA-AATCCCGCTTTTAGACTCATGTCATCTCATCTCTGCTATCCACCCATCATCTGTTCAAACAGTGATTCCTATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602365 82 - 106955855 CCCTCCCCA-AATCCCGCTTTTAGACTTATATCATCTCATCTCTGCTATCCACCCATCGTCTGTTCAAACAGTGATTCCTATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894086 82 + 64156825 CCCTCCCCA-AATCCCTCTTTTAGACTCATGTCATCTCATCTCTGCTATCCATCCATCGTCTGTTCAAACAGTGATTCCTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911487 82 + 59248254 CCCTCCCCA-AATCCCGCTTTTAGActcatgtcatctcatctctgctatccatccatcGTCTGTTCAAACAGTGATTCCTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030125 82 + 51301725 CCCTCCCCA-AATCCCGCTTTGAGACTCATGTCATCTCATCTCTgctatccatccatcatctgtTCAAACAGTGATtcctata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742697 82 + 50890351 CCCTCCCCA-AATCCCGCTTTTAGActcatgtcatctcatctctgctatccatccatcGTCTGTTCAAACAGTGATTCCTATA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19476775 79 - 122678785 CTTTCCTCACAAACCTGCTTTTAGACTCATGTTGCCTCAGCTCTGGTATTAGCCAATATTCTGC----ACAGTGATTCCCTTA i canFam3.chr1 I 380 I 3401 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=274299.000000 s hg38.chr19_GL949748v2_alt 35060 153 + 1064304 ttcttttttctttttgagacagggtctcactctgtggcccaggctggagtgccagggtgcagtcacagctcactgcagcctcaacctcctgggctcaagtgatccatccatctcagcctcccaaataactgggactacaggcatgcaccacca s panTro4.chr19 58971870 152 + 63644993 ttcttttt-ctttttgagacagtgtctcactctgtggcccaggctggagtgccagggtgcagtcatagctcactgcagcctcaacctcctgggctcaagtgatccgcccatctcagcctcccaaataactgggactacagacatgcaccacca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602447 152 - 106955855 ttcttttt-ctttttgagtcagggtctcactctgtggcccaggctggagtgccgggctgcggtcacagctcactgcagcctcaacctcctcggctcaagtgatctgcccgtgtcagcctcccaaataactgggactacaggcacgcaccacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894168 152 + 64156825 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911569 152 + 59248254 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030207 152 + 51301725 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742779 152 + 50890351 ttcttttt-ctttttaagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i chlSab2.chr6 C 0 I 21 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=17655.000000 s hg38.chr19_GL949748v2_alt 35213 17 + 1064304 cgct-ggctgattttaaa s panTro4.chr19 58972022 18 + 63644993 cgcccggctgatttttaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602599 18 - 106955855 cgcccggctgatttttaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894320 18 + 64156825 ggcccggctaatttttaa i rheMac3.chr19 C 0 I 7 s macFas5.chr19 54911721 18 + 59248254 ggcccggctaatttttaa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47030359 18 + 51301725 ggcctggctaatttttaa i papAnu2.chr19 C 0 I 14 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46742931 21 + 50890351 I a score=720109.000000 s hg38.chr19_GL949748v2_alt 35230 468 + 1064304 atttttttgtagagatgaggactcacgatg------------------ttgcccaggctggtctcgaacacctgagttcaagtgattctcccaccttggcctcccaacatgctgggattacaggtgtgagctacctgcacccagccCAATTCCCATATTCtttttcttttctttttttttttt-tttttttgacatggagtctccctctgtcacccaggctggagggcagcggtgctatcttagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtccttgccaccatgcccagctaa-tttttgtatttttagtagagacggggtttcaccatgttggccagtctggtctcaaactcctgacctcaagagatctgcccgcctgggcctcccaaagtcctgagattacaggcgtgagccaccacacctggctgatttgtgtttctt s panTro4.chr19 58972040 455 + 63644993 atttttttgtagagatgaggactcagtatg------------------ttgcccaggctggtctcgaacacctgagttcaagcgattctcccaccttggcctcccaacatgctgggattacagatgtgagctacctgcacccagccCAATTCCCACAttctttttctttt--------------tttttttgacatggagtctccctctgtcacccaggctggagggcagtggtgctatcttagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtccttgccaccatgcccagctaa-tttttgtatttttattagagacggggtttcaccatgttggccagtctggtctcaaactcttgacctcaagagatctgcccacctgggcctcccaaagtcctgagattacaggcgtgagccaccacacctggctgatttgtgtttctt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602617 460 - 106955855 atttttttgtagaggtgaggactcactatg------------------ttgcccaggctggtctcgaacacctgagttcaagcgattcttccaccttggcctcccagcgtgctgggattacaggtgtgagctacctgcacccagccCAATCCCCATAttctttttctttc--------ttttc-tttttttgatacggagtctccctctgttactcaggctggagtgcagtggtgctatctcagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtgctcgcaatcatgcccagctaa-tttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagagatctgcccacctgggcctctcgaagtcctgagattacaggcatgagccaccacacccggctgatttgtgtttctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894345 446 + 64156825 ttttttaagtagagatgggatttcaccatgnnnnnnnnnnnnnnnnnn------------------------tgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcaaactcctgacctcgagagatctgcccacctgggcctcccaaagtcctgagattacaagtgtgagccaccacacccagctgatttgcgtttctt i rheMac3.chr19 I 7 C 0 s macFas5.chr19 54911750 452 + 59248254 ttttttttgtagagatgaggactcactgtg------------------ttgcccaggctggtctggaacacctgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcaaactcctgacctcgagagatctgcccacctgggcctcccaaagtcctgagattacaagtgtgagccaccacacccagcTGATTTGCGTTTCTT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47030391 467 + 51301725 ttttttttgtagagatgaggactcactgtg------------------ttgctcaggctggtctggaacacctgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcAACCAGCCCAATTcccatattctttttctttttttttttttttttttttttttgagacggagtctcgctctgtca-ccaggctggagtgcaatggccggatcttcgctcactgcaagctccgcctcccgggttttacgccattct-ctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcccggctagttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcccctttttctttttt i papAnu2.chr19 I 14 I 824 s chlSab2.chr6 46742952 451 + 50890351 ttttttttgtagagatgaggactcaccgtg------------------ttgcccaggctggtctggaacacctgagctcaagcgattctcccacctcggccttccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccacg-tggccaggctgatctcaaactcctgacctcgagagatcttcccacctgggcctcccaaagtcctgagattacaggtgtgagccaccacacccagcTGATTTGCGTTTCTT i chlSab2.chr6 I 21 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=104483.000000 s hg38.chr19_GL949748v2_alt 35698 83 + 1064304 gaaaagagaagttcaagttgtaactcccaggacctgcgaatgtgaccttatttgaaaatagcattgtctgatctttgcagatg s panTro4.chr19 58972495 83 + 63644993 gaaaagagaagttcaagttgtgactcccaggacctgcgaatgtgaccttatttgaaaatagcattatctgatctttgcagatg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102603077 82 - 106955855 gaaaagagaagttcaagttgtaactcccaggacctgcgaatgtgacctcatttgaaaataa-attatctgatctttgcagatg i nomLeu3.chr10 C 0 M 2026 s rheMac3.chr19 59894791 83 + 64156825 gaaaagagaagctcaagttgtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912202 83 + 59248254 GAAAAGAGAAGCTCaagttgtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46743403 83 + 50890351 GAAAAGAGAAGCTCACGTTGtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e papAnu2.chr19 47030858 824 + 51301725 I a score=135032.000000 s hg38.chr19_GL949748v2_alt 35781 170 + 1064304 taattaattaaactaagatgaggtcatactagagtaggctgggtatctaatccaatataacttacaagaagagaaaaagagagacagagacacacagaaggaagacggccatgcgaagacagaggcagagaggccaggctgcaatcatagtgctttgggatgccaagata s panTro4.chr19 58972578 164 + 63644993 taattaattaaactaagatgcggtcataccggagtaggctgggtatctaatccaatataacttacaagaagagaaaaagagagaca------cgcagaaggaagacggccatgcgaagacagaggcagagaGGCCAGGctgcaatcgtagtgctttgggatgccaagata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59894874 168 + 64156825 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttacgagaagagaaagagagagaga--gacacgcagaaagaaggtggccatgcaaagacagaggcagagaGGCCAAGctgcaatcacagtgctttgggaggccgagata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912285 166 + 59248254 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttacgagaagagaaagagagagaga--gaca--cagaaagaaggtggccatgcaaagacagaggcagagaGGCCAAGctgcaatcacagtgctttgggaggccgagata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46743486 168 + 50890351 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttatgagaagagaaaaagagagaga--gacacacagaaagaaggtggccatgcaaagacagaggcagagaGGCCAGGctgcaatcacagtgctttgggaggccgagata i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e papAnu2.chr19 47030858 824 + 51301725 I a score=29359.000000 s hg38.chr19_GL949748v2_alt 35951 16 + 1064304 ggagaattgcttgagc s panTro4.chr19 58972742 16 + 63644993 ggagaattgcttgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839417 16 + 60714840 ggaggattgcttgagc i ponAbe2.chr19 I 1515 C 0 s rheMac3.chr19 59895042 16 + 64156825 ggagaattgcttgagc i rheMac3.chr19 C 0 I 282 s macFas5.chr19 54912451 16 + 59248254 ggagaattgcttgagc i macFas5.chr19 C 0 I 281 s papAnu2.chr19 47031682 16 + 51301725 ggaggattgctcgagt i papAnu2.chr19 I 824 C 0 s chlSab2.chr6 46743654 16 + 50890351 ggagaattgcttgagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M a score=231838.000000 s hg38.chr19_GL949748v2_alt 35967 140 + 1064304 ccaggagttggagactagcctgggcaatatagcaagatcccatctct-----------aaaacagaaattattttaattagtccaacatggtg--gtgtgcacctgtagtcctagctgctcagaaggct-gcggggagg--------------actgcttgagctcag s panTro4.chr19 58972758 154 + 63644993 ccaggagttggagactagcctgggcaatatagcaagaccccatctct-----------aaaagagaaattattttaattagtccaacatggtg--gcgtgcacctgtagccctagctgctcagaaggct-gcggggggggggcgggggggggtactgcttgagctcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839433 142 + 60714840 ccaggagttggagactagcctaggcaatatagcaagaccccatctct-----------aaaacagaaattattttaattagaccaacatggtggtgtgtgcacctgtagttctagctgctcagaaggct-gcggggagg--------------attgtttgagctcag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895340 140 + 64156825 ccaggaattggagactagcctgggcaatctagcaagaccccatctct-----------aaaacagaaattactttaattagtccaacatggtg--gtgtgcacctgtagttctagcagctcagaaggct-gtggggagg--------------attgcttgagctcag i rheMac3.chr19 I 282 C 0 s macFas5.chr19 54912748 140 + 59248254 ccaggaattggagactagcctgggcaatctagcaagaccccatctct-----------aaaacagaaattactttaattagtccaacatggtg--gtgtgcacctgtagttctagcagctcagaaggct-gtggggagg--------------attgcttgagctcag i macFas5.chr19 I 281 C 0 s papAnu2.chr19 47031698 140 + 51301725 ccaggaattggagactagcctgggcaatctagcaagactccatctct-----------aaaacagaAATTACTTTAATTAGTCcaacatggtg--gtgtgcacctgtagttctagcggCTCAGAAGGCt-gcggggagg--------------attgcttgagctcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46743670 152 + 50890351 tcacgacttggagactagccttggcaatatagaaagaccccatcgctgcaaaaaaaaaaaaaaaaaaattattttaattagcccaatgtggtg--gtgtgcacctgtagttgtagctgctcagaaggctaatggggagg--------------attgcttgagcccag i chlSab2.chr6 C 0 I 2373 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M a score=503600.000000 s hg38.chr19_GL949748v2_alt 36107 421 + 1064304 gaggttgaggctgcagtgagctatggtggtaccactgcactccggcctgggcaactgagtgagaccctgtctaaagaa-------aa-gaaaaaaaaaaacagagccaacgattggagtgatgcatctacaagttaaagaatgccgggagcgc--------tggctcacgcctgtaatctcaacagtttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgaggccagcctggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtggtccatgcttgtaatcccagctacttgggaggctaaggcaggagaattgattgaacccaggaggtggaggttgcagtgaga-aagatcatgccactgcactctagcctgggtgacagagcaagactccgcctc----aagaaaa s panTro4.chr19 58972912 420 + 63644993 gaggttgaggctgcagtgagctatggtagtaccactgcactccggcccgggcaactgagtgagaccctgtctaaagaa-------aa---aaagaaaaaaCAGagccaacgattggagtgatgcatctacaagttaaagaatgccgggagcgc--------tggctcacgcctgtaatctcaacagtttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacgtggtgaaatcctgtctctactaaaaatacaaaaattagccaggcatggtggcccatgcttgtaatcccagctacttgggaggctaaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagatcatgccactgcactctagcctgggtgacagagcaagactccgcctc----aagaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839575 423 + 60714840 gaggttgaggctgcagtgagctatggtggtaccactgcactccggcctgggcaactgagtgagaccctgtctaaagaa-------aaaaaaaaaaaaaaaCACagccaacgattggagtgatgcatctacaagttaaagaatgccaggagcgc--------tggctcacgcctgtaatcccagcactttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcccatgcttgtaatcccagctacttgggaggctaagacaggagaattgcttgaacccaggaggtggaggttgcagtgaaccaagatcatgccactgcactctagcctgggtgacagagcaagactctgcctc----aaaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895480 436 + 64156825 gaggttgaggctgtagtgagctatggtggtaccactgcactccagcctg-gtgactgagtgagaccctgtctaaaaag----aaaaaaaaaaaaaaaaaaGACagccagcaatttgagtgatgcatctacaagttaaagaatgccaagagggcaggcacggtggctcaagcctgtaatctcaacactttgggaggctggggggagggggtggatcacctgaggtcaggagtttgagaccagcctggccaaaagggtgaaaccccgtctctactaaaaatacagaaattagccaggcgtggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagtattgcttgaacctgggaggtggcggttgcagtgagccgagatcatgccactgcactctagcctgggtgacagacagagactctgcctc-----aaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912888 441 + 59248254 gaggttgaggctgtagtgagctatggtggtaccactgcactccagcctg-gtgactgagtgagaccctgtctaaaaagaaaaaaaaaaaaaaaaaaaaaagacagccagcaatttgagtgatgcatctacaagttaaagaatgccaagagggcaggcacggtggctcaagcctgtaatctcaacactttgggaggctggggggagggggtggatcacctgaggttgggagttcgagaccagcctggccaacagggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccgagatcatgccactgcactctagcctgggtgacagacagagactctgcctc----aaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47031838 435 + 51301725 gaggttgaggctgcagtgagctatggtggtaccactgcactccagcctgcgtgactgagtgagaccctgtcttaaaaa-----------aaaaaaaaagacagagccAGCAATTTGAGTGATGGATCTACAAGTTAAAGAATGCCAagagggcaggcatggtggctcaagcctgtaatctcaacactttaggaggctgcggggagggggtggatcacctgaggtcaggagttcgagaccagcctggccaacacggtgaaaccccgtctctactaaaaatacaaaaattagctaggcgaggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccactgcactctagcctgggtgacagacagagactctgcctcaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=387013.000000 s hg38.chr19_GL949748v2_alt 36528 273 + 1064304 aaaaaaa--------atgccaagaattgtcagccatcactaga----agaggggcataaaacagacgctc--------cttcatagttctcagaaggaatcaacattgcaaacaccttggtttcagacttctcatctccccaacttaaagca-----attctaattcctttaagccaccaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAACCCGATAGTCATCTCTAAGGC s panTro4.chr19 58973332 272 + 63644993 aaaaaaa---------tgccaagaattgtcagccatcactaga----agaggggcataaaacagacgctc--------cttcatagtcctcagaaggaatcaacattgcaaaccccttggtttcagacttctcatctccccaacttaaagca-----attctaattgctttaagccaccaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAGCCCGATAGTCATCTCTAAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839998 280 + 60714840 aaaaaaaaaaaaaaaatgccaagaattgtcagccatcactaga----agaggggcataaaacagattct---------cttcatagccctcagaaggaatcaacattgccaacatcttggtttcagacttttcatctccccaacttaaagca-----attttaattgctttaagccactaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACAGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAGCCTGATGGTCATCTCTAAGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895916 284 + 64156825 aaaaaaa-aaacagaatgctaagaattgtcagccaccactaga----agaggggcataaaacagattctc--------cctcatagccctcagaaggaatcaacattgccaacactttggtttcagacttctcatctccccaactgcgagagagtgca-tttagttgctttaagccatcaggcttgtagtactttggtatggcagccACTGG-------------GGGATGAGGTCAGCCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTGT----------GAGCCCGATGGTCATCTCTAAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913329 285 + 59248254 aaaaaaa-aaacagaatgctaagaattgtcagccaccactaga----agaggggcataaaacagattctc--------cctcatagccctcagaaggaatcaacattgccaacactttggtttcagacttctcatctccccaactgcgagagagtgcattttagttgctttaagccatcaggcttgtagtactttggtatggcagccACTGG-------------GGGATGAGGTCAGCCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTAT----------GAGCCCGATGGTCATCTCTAAGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032273 285 + 51301725 aaaaaaa-aaaaagaatgccaagaATTGTCAGCCACCACTAGA----AGAGGGGCAtaaaacagattctc--------cctcataGCCCTCAGAAGGAATCAACATTGCCAACACTTTAGTTTCAGACTTCTCATCTCCCCAACTGCGAGAGAGTGCATTTTAGTTGCTTTAAGCCATCAGGCTTGTAGTACTTTGGTATGGCAGCCACTGG-------------GGGATTAGGTCAGCTTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTAT----------GAGCCTGATGGTCATCTCTAAGGC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19480255 313 - 122678785 --------aaacaaggaacccagccctgccagctgtccccagaagcgaggggagcttggaatgaattctcccttggagcctcagagcattcaagaggaatttactcagctagcaccttgatcttggatctctggcctccagaactgtgggagagtagatttatgttgtgttaagccacttggtttgtggcactttgtcacagcagccctggaaatgaatacGGGCAGAGTGAGGTCAGTCTCTCGACTGCCCAGCTTATTCTGCTCTGTAGCTGGAGAGCTGGAGGTTTGGTGCATAGTGACTGACAGCCACCCCTAAAGC i canFam3.chr1 I 3401 C 0 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=36527.000000 s hg38.chr19_GL949748v2_alt 36801 28 + 1064304 ACAAATAgccgggtgcagtggctcacac s panTro4.chr19 58973604 28 + 63644993 ACAAATAgccgggtgcagtggatcacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840278 28 + 60714840 ACAAATagctgggtgcagtggctcacgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59896200 28 + 64156825 ACAAATAgccgggtgtagtggctcacgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913614 28 + 59248254 ACAAATAgccgggtgtagtggctcacgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032558 28 + 51301725 ACAaatagccgggtgtagtggctcacgc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=252151.000000 s hg38.chr19_GL949748v2_alt 36829 166 + 1064304 ctgtaatcccagcactttaggaggttgaagtgggtagatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaa--aaaattagccaggcgtggtggcgtgtgcctataatcccagcttctcgggaggcggagg s panTro4.chr19 58973632 166 + 63644993 ctgtaatcccagcactttaggaggttgaagtgggtagatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaa--aaaattagccaggcgtggtggcgtgtgcctgtaatcccagcttctcgggaggcggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840306 166 + 60714840 ctgtaatcccagcactttaggaggttgaagtgggtagatcacccgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaa--aaaattagccaggcgtggtggtgcgtgcctgtaatcccagcttctcaggaggctgagg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59896228 166 + 64156825 ctgtaatctcaacactttaggaggttgaagtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcatggtggtgcgcacctgtaatcccagcttctcgggaggctgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913642 166 + 59248254 ctgtaatcccaacactttaggaggttgaagtgggtggatcacctgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcgtggtggtgcgcacctgtaatcccagcttctcgggaggctgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032586 166 + 51301725 ctgtaatcccaacactttaggaggttgaagtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcatggtggtgcgcacctgtaatcccagcttcttgggaggctgagg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45323150 166 + 49145316 CTGCGATCACTGGGTtttgggaggctgagacagaagaactgtttgagcccatgagtcagagactagcctgggcaatacagcaagaccccatctctaaaaaagaaattattttaattagcccagcatggtggtgtgcac--gtagttctagctgcccagaaggtttggg i calJac3.chr22 I 1387 C 0 e canFam3.chr1 19480568 0 - 122678785 C e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=213147.000000 s hg38.chr19_GL949748v2_alt 36995 95 + 1064304 caggagaatcgcttgaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa s panTro4.chr19 58973798 95 + 63644993 caggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840472 95 + 60714840 caggagaatcgcttcaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605185 95 - 106955855 caggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i nomLeu3.chr10 M 2026 C 0 s rheMac3.chr19 59896394 107 + 64156825 tgggagaatcgcttgaacccaggaggtggcggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913808 107 + 59248254 tgggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032752 107 + 51301725 tgggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45323316 93 + 49145316 --ggaggattgcttgagcccaggaggttgaggctgcagtgagctatggtggtaccactgcactccagcctgggtgacagagtgagacccggtctc------------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C e chlSab2.chr6 46743822 2373 + 50890351 I a score=54563.000000 s hg38.chr19_GL949748v2_alt 37090 27 + 1064304 aaa-------aaaaaaaaa-------------aTGCTCATCTAAGGT s panTro4.chr19 58973893 26 + 63644993 aaa-------aaaaaaaaa--------------TGCTCATCTAAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840567 40 + 60714840 aaa-------aaaaaaaaaaaaaaaaaaaaaaaaGCTCATCTAAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605280 40 - 106955855 aaa-------aaaaaaaaaaaaaaaaaaaaaaaaGCTCATCTAAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896501 27 + 64156825 aag-------caaaaaaaa-------------aaGCTCATCTAAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913915 34 + 59248254 aaaaaaaagcaaaaaaaaa-------------aAGCTCATCTAAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032859 30 + 51301725 aagcaa----aaaaaaaaa-------------aagctcatctaAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746195 27 + 50890351 AAA-------AAAAAAAAA-------------CGGCTCATCTAAGGT i chlSab2.chr6 I 2373 C 0 s calJac3.chr22 45323409 26 + 49145316 aaa-------aaaaaaaaa-------------aaGCTAATCTAA-GT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C a score=803292.000000 s hg38.chr19_GL949748v2_alt 37117 264 + 1064304 GCAAATGTGTGTAGGAGACGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAAGCAGACGAAGCACGTCGATGTC----------CACCGCACCCC-CCGTGCACCAGGgaggaactggggccttagggaggtggagctctgctgggtca-agcctagagtttctatgtagtaaagccgagattataa-cccaggtcatccgtttcacagtgtgagctctgtctgAATACATCAGGTTCAATTGGAGGATGGTTAAAA s panTro4.chr19 58973919 264 + 63644993 GCAAATGTGTATAGGAGACGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAAGCAGATGAAGCACGTCGATGTC----------CACCGCACCCC-CCGTGCACCAGGgaggaactggggccttagggaggtggagctctgctgggtca-agcctagagtttctatgtagtgaagccgagattataa-cccaggtcatccgtttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATGGTTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840607 245 + 60714840 GCAAATGTGTGTAGGAGATGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAGGCAGATGAAGCATGTCAATGTC----------CACCACCCGCC-CCGTGCAcc-------------------agggaggtggagctctgctgggtca-agcctagagctcctatgtagtgaagctgagattataa-cccaggtcttccttttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATGGTTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605320 263 - 106955855 GCAAATGTG-GTAGGAGACGAGCATTACCCCAAAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAGGCAGATGAAGCTTGTCGATGTC----------CACCACACCCC-CTGTGCACCAGGgaggaactgaggccttaggcaggtggagctctgctgggtca-agcctagagcttctatgtagtgaagctgagattataa-cccaggtcttccttttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATCGTTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896528 263 + 64156825 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCACATTGATGAC----------CACCACACCcc-ccatgcacca-ggaggaactggggccttagggaggtggagctctgctgggtca-agcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGGTTGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913949 263 + 59248254 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCACATTGATGAC----------CACCACACCcc-ccatgcacca-ggaggaactggggccttagggaggtggagctctgctgggtca-agcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGGTTGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032889 264 + 51301725 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCGCATTGATGAC----------CACCACACCCC-CCATGCACCAGGGAGGAACTGGGGCCTTAGGGAGGTGGAGCTCTGCTGGGTCA-AGCCTAGAGTTCCTAGGTAGTGAAGCCCACATTGTAA-CCCAGGTCTTCCTTTTCACAGTGTGAGCTCTGTCTGAATACATCAGGTTCAATTTGAGGATGGTTAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746222 263 + 50890351 GCAAATGGGTGTGCAAGAGGGGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCGCATTGATGTC----------CACCACACCcc-ccatgcaccagggaggaactggggccttagggaggtgcagctctgctgggtca-ggcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGG-TAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45323435 250 + 49145316 GCAAATGTGTGTAGGAGAGTAGCATTACCCTGCAGGGAAGGGCTGCACCCAGAAAAGG-GGAAGGAACTGAGGCAG-TGAAGCATGTTGATGTC----------TACCACACCCCTCCATGCATCC-------------GCcttagggaggtggaactctgctgggtca-agcctagagctcctatgtagtgaagccaagactataa-cccagatcttccttctgacagtctgagctctgtctgattacatcaGGTTCAATCTGAGGATGGTTTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19480568 269 - 122678785 TCAAATGTGTGTGTGGGAGGAGCATTACCCCA-AAAGAAGGGCTGTA-TTGCAGAAGGAGGAAGGAACTACGGCAAATGACAAGTCCTGATAGCCTTTACACAACCCCTCACCCC-CAACTCACGAAAGAAGAACCAGAGTCTT-GGTCAGTGGAG--CTGCTGGTTCGTAGTCTAGGGCTCCTATGAGATCAAGCCAAGGTCATAATCCCAGGTCTTCATTT--ACAGGCTGAGGTCCCTTTGATTGCATCATGTTCAAGTTAAGAACAGTTAAAA i canFam3.chr1 C 0 I 176 a score=701660.000000 s hg38.chr19_GL949748v2_alt 37381 240 + 1064304 TCAGCCTAAGAATCGAGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaggggctcgagaccagcctgaccaacatggtgaaaccccgtctctacttaaaatacaaaagtca-gccgggtgtggtggcctgcacctgtagtcccacctactcgggaggctgaggcaggagaatcgc s panTro4.chr19 58974183 240 + 63644993 TCAGCCTAAGAATCGAGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggggctcgagaccagcctgaccaacatggtgaaaccccgtctctacctaaaatacaaaagtca-gccgggtgtggtggcctgcacccgtagtcccacctacttgggaggctgaggcaggagaatcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840852 240 + 60714840 TCAGCCTAAGAATCGAGCTGGTCACAAAATTGTCTTCTTGGggccaggtgtggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggggttcaagacaagcctgaccaacatggtgaaaccccgtctctgcttaaaatacaaaagtca-gctgggtgtggtggcctgcacgtgtagtcccagctacccgggaggctgaggcaggagaattgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605583 240 - 106955855 TCAGCGTAAGAATCGGGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggggcttgagaccagcctgaccaacatggtggaaccccgtctctacttcaaatacaaaagtta-gccgggtgtggtggcgtgcacctgtagtcccacctactcgggaggctgaggcaggagaatcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896791 240 + 64156825 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTTCTCTTGGggccaggcgtggtggcttatgcctgtaatcccagcacgttgggaggctgaagcaggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914212 240 + 59248254 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTTCTCTTGGggccaggcgtggtggcttatgcctgtaatcccagcacgttgggaggctgaagcaggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033153 240 + 51301725 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTCTtcttggggccaggcgtggtggtttatgcctgtaatcccagcactttgggaggctgaagcgggcggatcacctgagttcaggggCTTGAGagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggaggatcgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746485 240 + 50890351 TCAGCCTAAGAATCGGACAGGTCAGAAAATTGTTCTCTTGGggccaggtgtggtggcttatgcctgtaatcccagcactttgggaggctgaagcgggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgtacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45323685 241 + 49145316 TCAGCCTAAGTACAGAGCTGGTCAGAAAATTGTCCTCTTGGggccgggtgtggtggctcatgcctgtaatcccaccactttgggaggcagaggcaggcggatcacctgagatcaggggttcgagaccagcctgaccaacatggtgaaaccctgtctctacttaaaatacaaaaattaggccgggcacagtggctcacgcctgtaatcccaacactttgggatgccaagacaggcagatcac i calJac3.chr22 C 0 I 366 e canFam3.chr1 19480837 176 - 122678785 I a score=109663.000000 s hg38.chr19_GL949748v2_alt 37621 37 + 1064304 ttgaacctgggagacggaggttgcagtgagcccagat s panTro4.chr19 58974423 37 + 63644993 ttgaacctgggagacggaggttgcagtgagcccagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841092 37 + 60714840 ttgaacccgggaggcggagattgcaatgagcccagat i ponAbe2.chr19 C 0 I 257 s nomLeu3.chr10 102605823 37 - 106955855 ttgaacctgggaggcggaggttgcagtgagcccagat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897031 37 + 64156825 ttgaacctgggaggtggaggttgcagtgagctgagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914452 37 + 59248254 ttgaacctgggaggtggaggttgcagtgagctgagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033393 37 + 51301725 ttgaacctgggaggtggaggttgcagtgagccgagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746725 37 + 50890351 ttgaacccgggaggtggaggttgcagtgagctgagat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324292 37 + 49145316 ttgagcctgggaggcagaggttgcagtgagccaaggt i calJac3.chr22 I 366 C 0 e canFam3.chr1 19480837 176 - 122678785 I a score=88540.000000 s hg38.chr19_GL949748v2_alt 37658 37 + 1064304 cacgccattgcactccagcctgggctacagagtgaga s panTro4.chr19 58974460 37 + 63644993 catgccattgcactccagcctgggctacagagtgaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605860 37 - 106955855 cacgccattgcactccagcctgggctacagagtgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897068 37 + 64156825 cacgccattgcactccagcctgggccatagagtgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914489 37 + 59248254 cacgccattgcactccagcctgggccatagagtgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033430 37 + 51301725 cacaccattgcactccagcctgggccatagagtgaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746762 37 + 50890351 cacaccattgcactccagcctgggccatagagtgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324329 37 + 49145316 cacaccattgcactacagcctggatgacagagtgaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480837 176 - 122678785 I e ponAbe2.chr19 55841129 257 + 60714840 I a score=47356.000000 s hg38.chr19_GL949748v2_alt 37695 19 + 1064304 ctctgtctcataaataaaT s panTro4.chr19 58974497 19 + 63644993 ctctgtctcataaatacat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605897 19 - 106955855 ctgtgtctcataaataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897105 19 + 64156825 ctctgtctcataaataaat i rheMac3.chr19 C 0 I 134 s macFas5.chr19 54914526 19 + 59248254 ctctgtctcataaataaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033467 19 + 51301725 ctctgtctcataaataaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746799 19 + 50890351 ctctgtctcataaataaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324366 19 + 49145316 gcctgtctcgaaaaaaaaa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481013 19 - 122678785 ctatctctcatgaataaat i canFam3.chr1 I 176 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I a score=-7844.000000 s hg38.chr19_GL949748v2_alt 37714 16 + 1064304 -GCatacatacataaat s panTro4.chr19 58974516 16 + 63644993 -acatacatacatacat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605916 5 - 106955855 -aaata----------- i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 54914545 16 + 59248254 -aaaTACagagagagag i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47033486 16 + 51301725 -agagagagagagagag i papAnu2.chr19 C 0 I 119 s chlSab2.chr6 46746818 16 + 50890351 -aaaTACagagagagag i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45324385 1 + 49145316 --------------g-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481032 16 - 122678785 aaaatcttaaaaaaaa- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I e rheMac3.chr19 59897124 134 + 64156825 I a score=-2337.000000 s hg38.chr19_GL949748v2_alt 37730 9 + 1064304 -------aaataaata s panTro4.chr19 58974532 2 + 63644993 -------aa------- i panTro4.chr19 C 0 C 0 s macFas5.chr19 54914563 2 + 59248254 -------ag------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47033621 2 + 51301725 -------aa------- i papAnu2.chr19 I 119 C 0 s chlSab2.chr6 46746838 2 + 50890351 -------ag------- i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19481048 9 - 122678785 aagaAAGAA------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I e calJac3.chr22 45324386 0 + 49145316 C e nomLeu3.chr10 102605921 2 - 106955855 I e rheMac3.chr19 59897124 134 + 64156825 I a score=12570.000000 s hg38.chr19_GL949748v2_alt 37739 12 + 1064304 ----------aGAGAGAGAGAG s panTro4.chr19 58974534 7 + 63644993 ---------------gagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841386 12 + 60714840 ----------agagagagagag i ponAbe2.chr19 I 257 C 0 s nomLeu3.chr10 102605923 12 - 106955855 ----------AGAGAGACAGAG i nomLeu3.chr10 I 2 C 0 s macFas5.chr19 54914565 12 + 59248254 ----------agagggagagag i macFas5.chr19 C 0 I 35 s papAnu2.chr19 47033623 12 + 51301725 ----------agaaggaaagaa i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46746840 12 + 50890351 ----------agagagagggaa i chlSab2.chr6 C 0 I 27 s calJac3.chr22 45324386 12 + 49145316 ----------agagagaaagag i calJac3.chr22 C 0 I 1 s canFam3.chr1 19481057 20 - 122678785 AAAACCAATCTGAGGATAAG-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59897124 134 + 64156825 I a score=561156.000000 s hg38.chr19_GL949748v2_alt 37751 211 + 1064304 ------AAGAAAATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCCTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATG-ATGGCAGTACTGCGGTATTTAGCGGCTGCAGACTCGGAGACCCCACAGCAGCTCTGCCTTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGCGGCCTCCTCCTCGCTTGCATGTGGGCGGCAGAACTCA--------- s panTro4.chr19 58974541 211 + 63644993 ------aagaaaaTTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCCTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGAGG-ATGGCAGTACTGCAGTATTTAGAGGCTGCAGACTCGGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGTGGCCTCCTCGTCGCTTGCATGCGGGCGGCAGAACTCA--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841398 210 + 60714840 ------aAATAAAATGTCTTTTTGCTCA--------------------------CAGCCTTG----------CACCCTGTAAATTCTTAA-------GCCCAG-CCTTCTCTATTCCGACGGAGGATG-ATGGCAGTACTGCGGTATTTAGTGGATACAGACTCAGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCTGTGTCTCTGCAGCGCGGCCTCCTTGTCACTTGCATGTGGGCAGCAGAACTCA--------- i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 102605935 210 - 106955855 ------AAGAAAATTGTCCTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGTCCTCCT-TATTCCGACGGAGGATG-ATGGCAATACTGCGGTATTTAGTGCATACAGACTCGGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGCGGCCTCCTCGTGGCTTGCATGTGGGCGGCAGAACTCA--------- i nomLeu3.chr10 C 0 I 6 s rheMac3.chr19 59897258 217 + 64156825 ------AAGGAAATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCCTGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGCGGAGTAAGCA-AG--GCCTCCCCGTGTCT--GCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACGCA--------- i rheMac3.chr19 I 134 I 11 s macFas5.chr19 54914612 219 + 59248254 ------aaggaaaTTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCCTGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGCGGAGTAAGCA-AG--GCCTCCCCGTGTCTCCGCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACGCA--------- i macFas5.chr19 I 35 I 2 s papAnu2.chr19 47033642 200 + 51301725 ------aaggaaattgtCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCAACGGAGGATGCATGGCAATACTGCGGTATTTAGCGGGTGCAGACTCGGAGAC--------------------CCCAGCGGAGTAAGCAGAG--GCCTCCCCGTGTCTCTGCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACTCA--------- i papAnu2.chr19 I 7 I 2 s chlSab2.chr6 46746879 220 + 50890351 ------aaggaaATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCATGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGGGGAGTAAGCAGAG--GCCTCCCCGTGTCTCTGCAGCGCGGCCTCCTCGTCACTTGCAAGTGGGCGGCCGAACTCA--------- i chlSab2.chr6 I 27 I 11 s calJac3.chr22 45324399 217 + 49145316 ------aagaaaACTGACTTTTTGCCCA--------------------------TAGCCTTG----------CACCCCGTAGATTCTGAA-------GCCCAGCCCTC---TATGCCAAGGGAGGATGCATGACTGTGCTGCGGCATTCAGCAGAGACAGGCTGGGAGGTCCCACCGGAGCTCGGCACTGCCCAGCGGAGTAAGCAAGG--CTGCCCCTGTGTCTCTGCAGCATGGCCTCCTTGTGGCTTCCATGTGGGCAGCAGAACTCA--------- i calJac3.chr22 I 1 I 6 s canFam3.chr1 19481077 275 - 122678785 GCTGGTCAGAAAATTTTCTTTTCATTCATTGTCCCCAGACATAGCCCTTTTCTGTAGTCTTGGTCTGTACCCAAACCTACAGCTCCACACCCTATGTGCCCTGCCCTCCTATATGCCAACAAACATTC-ATGGCAAGACTG--ATATTTGGACAAATAAAGTTTGGAGAACTCATGGGAGCTCTGCATTTCTCAGCTGAGTAAACGAGGGTGTCACCCCACGTCTCTGAACCTCA--CTTCCCATCTCCTGTGTGCGAGCACCAGAACAGAGGCATGTCA i canFam3.chr1 C 0 C 0 a score=-565.000000 s hg38.chr19_GL949748v2_alt 37962 5 + 1064304 CAGAA s panTro4.chr19 58974752 5 + 63644993 CAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841614 5 + 60714840 CGACG i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 102606151 5 - 106955855 CGACG i nomLeu3.chr10 I 6 C 0 s macFas5.chr19 54914833 5 + 59248254 CAGGG i macFas5.chr19 I 2 I 4 s papAnu2.chr19 47033844 5 + 51301725 CAGGG i papAnu2.chr19 I 2 I 4 s calJac3.chr22 45324622 5 + 49145316 CGGTG i calJac3.chr22 I 6 C 0 s canFam3.chr1 19481352 2 - 122678785 TA--- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46747099 11 + 50890351 I e rheMac3.chr19 59897475 11 + 64156825 I a score=1488230.000000 s hg38.chr19_GL949748v2_alt 37967 477 + 1064304 CCCACAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACACCTGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTGCCACTCCCACATGAGTTTTTCTCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGCGGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCGCCTTGGGTTTT-ACC-CTTCAAAGG-CGGAGCGGGACTGGGCCGGCCGCAGCTCTCCGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATAGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGATAACTTCTTCCCCATGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA s panTro4.chr19 58974757 477 + 63644993 CCCACAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCCTGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTGCCACCCCCACACGAGTTTTTCTCATCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGCGGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACC-CTTCAGAGG-CGGAGCGGGACTGGGCCGGCCGCAGCTCTCCGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATAGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGATAACTTCTTCCCCATGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCGAGCTGTGCCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841619 477 + 60714840 CCCACAGCCCAGA-----CCCACCCACCACAGGTGTGCAACGCCTGGAAGTTGTTACTTCCACACACCGCATTTCCACCTGAACTTCCACTCCCACATGAGTTTTTCTCACCAGCCCAAGCCCATTCGTTCCAGTCCCGGA-GACTCACCGAGGCAAAGCAGGGAAAGTAATTCTGTAGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCACCTTCGGTTTT-ACC-CTTCAAAGG-CGGAGAGGGACTGGGGCAGCCGCAGCTCTCTGGATGCCCGGTTCGTCCCCAGGATGTGCAGGTGGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCCCATGAATCCGGTGTGTGTAGCCCCA-------CCCGCCCGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606156 478 - 106955855 CCCACAGCCCAGA-----CCCACCTACCGCAGGTGTGCAACGCATGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTTCCACTCCCACATGAGTTTTCCTCACCAGCCCAAGCCCATTCGTCCCAGCCCTGGAGGACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTCTCCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACC-CTTCAAAGG-CGGAGCGGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCTCAGACACTGTGGTTCTCTGCC-CCACTCTTGCAGTTCCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCCCCTGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCAAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897486 473 + 64156825 CCCCCAGCCCAGA-----CCCACCCACTGCAGGTGTGCAACGCGTGGAAGTCATTACTTCGACACACCGCATTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTGGGTTTT-ACCACTTCAAAGG-CGGAGCCGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCACA-------CCCGCCTGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54914842 473 + 59248254 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCATTACTTCCACACACCGCGTTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACCACTTCAAAGG-CGGAGCCGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGCGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47033853 467 + 51301725 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCATTACTTCCACACACCGCGTCTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCGGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCACCTTCGGTTTT-ACCACTTCAAAGG-CGGAGCGGGACTGGG------GCAGCTCTCTGGCTGCCCGATTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTACCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTCTCTGAAGTTCTG-CCAAGA---CTTCTGcaaa i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46747110 472 + 50890351 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCGTTACTTCCACACACCGCGTTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGCA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTCGGTTTTAACCACTTCAAAGG-CGGAGCGGGACTGGGGCGGC--CAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTACCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACGGACTCGGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTCTCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i chlSab2.chr6 I 11 C 0 s calJac3.chr22 45324627 443 + 49145316 CTCGCAGCCCAGC-----CTCACCCACCACAGG---------CGTGGAAGTCATTCCTTCCAAACACGGCCTTTCCACCTGGACTTCC-------CCTGAG-------CCCCTGTCCAAGCCCACATGTCCCAGTCTTGGA-GACTCACCGAGGCAAAGCACGGAGAGGAATTCTGTGGTCATAGTGACCCTTCTGCCAGAACCAATACCCCACGCTTGGCTTT-ACC-CTTTGGAGG-TGGAGCGGGACTGGGGTGGCCGTGGCTCCCTGGCTA-CCGCTTCGTCCCCAGGCTGTGCAGGTGGA-GAGGCTTCGCCCTGACGCTCTGGTTCTCTACC----------CAGTTTCCTTCTCACAGCCGACTTAGGAAACAAGAAACCGTTGATGACAACATCTTCCCCATGAGTCTGGTGTGTGTGGCCCCA-------CCCGCCTGAGCCGAGTCCTGCCTTATCTGAAGTTCTG-CCAAGA-CTTTTCTGTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481354 462 - 122678785 -CCACAGCCCACAAAACTCTGACAGGTAGCATGTGTCCAGTACACAGAAGACATCATTT----------------CACATCAACCCCCGCTTCACCGTGAA-TTTTCTCACCCACCCAAACCCATCTGTCCCAGTCCTGGA-GACTCACCAAGGCAAAGCAGGGACAGGAATTCTGTGAGCATAGTGTCCCTTCCACCCAGAACAAAATCCCGTCTTCAGTTTT-ATA-GTTCAAAGGAAGAAGGGGGACTGGGCCATC-GAGGCTCCCT-CCTGCCCACCTTGTCTCCAAGATGTGTGGGTA---AAGGTTTTACCCTGACACT-TGGTTCTCCACTGCCTGGTGTACAGTTTCCTTTTCACAATCAAGTCAGGAAA-------CCATCAGTGACAACATCTCCCTCATAAATCCGGTGTGTATGGCTCCAGCTCCACCCACCCTGAGACCTGTCCTATCTCATTTGAAGTCTTGACCAAGACATTTTCTTTAAA i canFam3.chr1 C 0 I 47883 a score=80697.000000 s hg38.chr19_GL949748v2_alt 38444 30 + 1064304 TGTAATTTTTTATTTTAAAACACTAATACC s panTro4.chr19 58975234 30 + 63644993 TGTAATTTTTTATTTTAAAACACTAATACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842096 30 + 60714840 TGTAATTTTTTATTTTAAAACATTAATACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606634 30 - 106955855 TGTAATTTTTAATTTTaaaatattaatact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897959 30 + 64156825 TGTAATGTTTTATTTTAAAGCGTTAATACC i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54915315 30 + 59248254 TGTAATGTTTTATTTTAAAGCATTAATACC i macFas5.chr19 C 0 I 367 s papAnu2.chr19 47034320 30 + 51301725 tgtaatgttttattttaaagcattaataCC i papAnu2.chr19 C 0 I 363 s chlSab2.chr6 46747582 30 + 50890351 TGTAATGTTTTATTTTAAAGCATTAATACC i chlSab2.chr6 C 0 I 11 s calJac3.chr22 45325070 29 + 49145316 TGTAGT-TTTTATTTTACAACATTAATACC i calJac3.chr22 C 0 I 2055 e canFam3.chr1 19481816 47883 - 122678785 I a score=22893.000000 s hg38.chr19_GL949748v2_alt 38474 44 + 1064304 ggccggacgcggtggctcacgcctgtaatcccagcaccttgaga s panTro4.chr19 58975264 44 + 63644993 ggccggacgcggtggctcacgcctgtaatcccagcaccttgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842126 44 + 60714840 ggccaggcgcggtggctcacacctgtaatcccagcactttgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606664 44 - 106955855 ggccaggcgcggtggctcgtgcctgtaatcccagcactttgaga i nomLeu3.chr10 C 0 I 2757 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=38645.000000 s hg38.chr19_GL949748v2_alt 38518 154 + 1064304 ggctgaggcgggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggagaaacccccgtctctactaaaaatacaaaattagccaggcatggtggcgcatgcctgtaatcccagctactccggaggctgagacaggagaatgg s panTro4.chr19 58975308 154 + 63644993 ggctgaggcgggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggagaaacccccgtgtctactaaaaatacaaaattagccaggcatggtggtgcatgcctgtaatcccagctactccggaggctgagacaggagaatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842170 152 + 60714840 ggctgaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggataaa-ccccgtctcaattaaaaatacaaaattagctagccat-atggcgcacgcctgtaatcccagctactccagaggctgagacaggagaatGG i ponAbe2.chr19 C 0 I 4912 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=11238.000000 s hg38.chr19_GL949748v2_alt 38672 130 + 1064304 cttgaacccaggaggcggaggttgctgtgagccaagattgtgccactgcactccagcctggacaacaacggtgaaactgtctcaaacaagcaaacaaacaaaCATTAATACCTATAGCTTTATAGCTTCC- s panTro4.chr19 58975462 131 + 63644993 cttgaacccaggaggcggaggttgctgtgagccaagattgcgccactgcactccagcctgggcatcaacggcgaaactgtctcaaacaagcaaacaaacaaaTATTAATACCTATAGCTTTATAGCTTCCT i panTro4.chr19 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=18125.000000 s hg38.chr19_GL949748v2_alt 38802 33 + 1064304 GTGTACCCACTAGCCAGCTCCCCACAATGTTAA s panTro4.chr19 58975593 33 + 63644993 GTGTACCCACTAGCCAGCTCCCCACAATGTTAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59898000 33 + 64156825 GTGTACCCACTAGCCAGCTCCCCACAAGGTTAA i rheMac3.chr19 I 11 I 329 s chlSab2.chr6 46747623 33 + 50890351 GTGTACCCACTAGCCAGCTCCCCACAAGGTTAA i chlSab2.chr6 I 11 I 215 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I a score=79743.000000 s hg38.chr19_GL949748v2_alt 38835 906 + 1064304 CCTTTTTTT------------GGGGGGCGGG--GGGgacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcatgggtttaaggattctcctgcctcagactcccaagtagctgggattacaagcatgcaccaccacacccagctaattttttgtagagatgggatttcaccatgtgggccaggctggtcttgaactcctggtctctagtgacccgcccacctcagcctcccaaagtgctgggattacaggcataagccactgtgcccggccaatggtaatctcttataattacagtactttttttttttttttttttttttgagacagaatctctgtcagccaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccgagttgccgggatgacaggtgtccgccaccactcttggctaattttttttgttctttttagtagaaacgaggttttgccatgttgcccaggctggtctcgaacttctgacctcaggcgatccgcctgcctcggcctcccaaactgctgggattacaggcgtgagccaccacgcccggcgtatggcacattttcaaaaccagagactttgcactggcatcacacgtttaaccaggttccagaggtcactcagatctcaccagtttgtgcataattcgtttctctttttctcttccTCTTCCttctatttctatttccttttctccttttccttcttttctcctgctcttcctcctcttccaccttcttttcctcctccCTTTTCTTTGCCTATGGGTATAGTTCTGTAACATTTTATTGCCTGTatgtatggctttatagaaccaccgccacaatcaagac s panTro4.chr19 58975626 919 + 63644993 CCTTTTTTTTGGCGGGGGGGGGGGGGGTGGGGCGGGgacagagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcatgggtttaatgattctcctgcctcagactcccaagtagctgggattacaagcatgcaccaccacacccagctaattttttgtagggatgggatttcaccatgtgggccaggctggtcttgaactcctggtctcaagtgactcgcccacctcagcctcccaaagtgctgggattacaggcataagccactgtgcccggccaatggtaatctcttataactacagtac-tttattttttatttttttttttgagacagaatctctgttgcccaagctggagtgcagtggttcaatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccaagttgctgggatgacaggcgcccgccaccgctcttggctaatttttttcgttctttttagtagaaacgaggttttgccatgttgcccaggctggtctcaaacttctgacctcaggcgatccgcctgcctcggcctcccaaactgctgggattacaggcgtgaaccaccgcgcccggcgtatggtacattttcaaaaccagagactttgcactggcaccacacttttaaccaggttccagaggtcactcagatctcaccagtttcggcataattcgtttctctttttctcttccTCTtccttctatttctatttccttttctccttttccttcttttctcctgctcttcctcctcttccaccttcttttcctcctccGTTTTCtgtgcctatgggtatagttctgtaacattttattgcctgtatgtatggctttatagagccaccgccacaatcaagac i panTro4.chr19 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I a score=0.000000 s hg38.chr19_GL949748v2_alt 39741 505 + 1064304 acagaactgtcccaccaccacgtaggaactccctcatgctgcccctttataatcgctctcccaccctagcacctgctaatctgttctacgtctctatcactttgtcactttgagactcttgtataaatggaatcgtccatcgcctcaccttctgagggtgacctttttcactcagcacaatgcctgtgagattcattcaaatggttgtgtgtTATGATGATGGATACattagccgggcgtggtggcacacgcccatagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcacgccactgcactccagcctgggtcacagagcaagactccatcaaaaaaaaagaattatctaatggatacaatgtgtgtcactgggttagtggatacctgaaagccctaacttcatcattttggaatctatccatgcaataaagttacacttgtaccccataaaCGTAtacaa e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=9528.000000 s hg38.chr19_GL949748v2_alt 40246 361 + 1064304 ataaaaaataatcgtctgggcatgatgacttaccgctgtaatcccagcactttgggaggctgaggcggga---------------------------ttacaggtgtgagcc---accatgcc---------cggccT-------------ATACTTTCTATCTTAATAACTACAAAAATAATAACTTGCTGGATGGGTCCCTGTGCCCA-CCCCGTCCT--GTCCTAAGTGAGGAGGATGGGAAGAA---AGCCATCGTCCTGTCCTGGTGCGGCTCTCAA-ACAGCTGGAAATGCTGGCTGCACAGGAAACT-CTAAGGATCGGCAGCTCTAGCGCATGCTACCCTTGGCAGCTGTGTGGTCTGTGGATAGAGAAGGACCAACCTGTGGTTAGTGG---AGGAAGAGGAGGAATATTGCTTT s nomLeu3.chr10 102609465 405 - 106955855 acaaaaattaa----ctgggcgtggtggcaggtgcctgtaatcccagcgactcgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcag---tgagccgagatcttgccattgcactgcagcctgggtgacagagtgagact--ccgtctcaaaaa--aaaaaagtatta--------ggtggctcattgtgcccagttctgtcctccgtccccagtgagaagtacaggaagaaGAAAGCCACCATCCTTCCCTAGAGCAGATCCCAATAGAGCTTAGAGTGCAGGTTCCACAGAAAGCAGTTAAGGCTCAGCTGGTCCAACCCATCATTCCCCGGGCAGCTGTGGGATCTATGGATAGAGAAGGACAGAGCTGAGCTTAGAGGGGAAGGAAGGGGATGAAGACTGTTTT i nomLeu3.chr10 I 2757 T 1379 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 40607 578 + 1064304 GATAAGCACATCCTCAGAGTTATAACAGAGGAGACAATAGTTATAAAATAAGAATGATATTTACGAAAAATAATAAGACTATTAACAAGAAACAGCAACAAATCTTGAAAACAAAATGTAACAACAAAACATAAATGTTGACtttttttttttttttttttttgagacggagtctcgctctgtcgcccaggctgcagtgcagtggtgagatctcggctcactgcaacctctgcctcccgggttccagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatattggccaggatggtctcgatctcttgaccttgtgatccgcccacctcggcctcccagagtgctgggattataggcatgagccacagcacctggcAACTGTTGACATTTTACATCTGCACCAGTAAGACTGGCTACCAATTACAAGCAAATGGATGCCATGGATAGAATGGAATTCCTGCCAAACTGGGTAAAATGTTGGAAACATATAAAATAAAATGTAAAAGAAATGT e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102609870 1379 - 106955855 T e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=74650.000000 s hg38.chr19_GL949748v2_alt 41185 850 + 1064304 ATTATAAATACAggctgggcgtggtggctcatgcctgtaatcccagcactttgggaagccaaggtgggcagatcacttgaggtcaggagttcgagaccagcctcgccaacatggtgaaaccccgtctctactaacacacaaaaattagccaggcatggtggtgggcgcctgtaatcccagctacttgagaggctgaggcaggagagtcacttgaacctgagagggaggttgcagtgagctgaaattacgccactgcactccagcctgggtgacagagtgagactccctctccaaaaaaaaa------gaaagaaagaaTGTATTATAAATACATATgaccaagcacagtggctaacgcctgtagtcctggcactttgggaggccaagatgagaggatcacttgagtccaagagttcgagaccaagttgggccatatggtggaacccggcttctacaaaaaatacaaaatttagtccggcatgatggcacacacctgtggtcccagctactcagaaggctgagatgggaggattactttagcctgggaggtcgaggctgcagtgagccgtgatctagccactacactccagcctgggcgacagagtgagaccctgtctcaaaataaataaatataataaataaataaataTGTATATCCCAATATTGGACTAAATGCTGGTCCAGAAGCACAAAATAGAAAGAACGGAGAGGAAGTATTAATAAATATTACACAGGAAGCAATGTTTTTCCCTTCGTGTGGAGGAAGAGTTCCCCGCAGGTGAGAGTCACCTACTACTCAATCTGACTCTGAAGTTTTAAGTATTGATTCAAGTTATCAAaaatgtattaagggctg s nomLeu3.chr10 102608491 852 - 106955855 ATTATAAATACAggctgggcatggtggctcatgcctgtaatcccagcactttgggaagctgaggtgggcagatcacttgatgtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaacacataaaaattagccgggcatggtggtgggcgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgagagggaggttgcagtgagctgaaattacaccactgcactccagcctgggtgaaagagcgagactccctctccaaaaaaaaaaaaaaagaaagaaagaaTGTATTATAAATACATATgaccaaacacagtggctaacgcctgtagtcctggcactttgggaggccaagatgagaggatcactcgagtccaagagttcgagaccaggttgggcaatatggtggaaccccgcttctacaaaaaatacaaaatttagccaggcgtgatggcacacacctgtggtcccagctactcagaaggatgagataggaggattgctttagcctgggaggtcgaggctgcagtgagccgtgatctagccactgcactccagcctgggtgacagagtgagaccctgtctcagaataaataaatataataaataaaTAG----GTATATCCCAATATTGGACTAAATGCTGGTCCAGAAGCACAAAATAGAAAGAATGGAGAGGAAGCGTTAATAAATATTATACAGGAAGCAATGTTTCTCCCTTCATGTGGAGGAAGAGTTCCCCGCAGGTGAGAGTCACCTACTACTCAATCTGACTCTGAAGTTTTAAGTATTGATTCAAGTTATCAAaagtgtattaagggctg i nomLeu3.chr10 T 1379 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=78705.000000 s hg38.chr19_GL949748v2_alt 42035 307 + 1064304 ggcacggtgactcaagcctgcaatcccagcactttgggaggccgaggtgggctgatcacttgagctcaggtgttcaagaccagcctggccaacatgggtgaaaccccatctctactaaaagtacaaaaattagctgggcatggtggcaggcgcctgtaatcccagcgacttgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagccgagatcttgccattgcactgcagcctgggtgacagagcgagactccgtctcaaagaaaaaaaaaaaaa------gtattacgtggc s ponAbe2.chr19 55847234 313 + 60714840 ggcacggtggctcaagcctgcaatcccagcactttgggaggccgaggtgggtggatcacttgagctcaggagttcaagaccagcctggccaacatgggtgaaaccctgtctctactaaaagtacaaaaattagctgggcgtggtggcaggcgcctgtaatcccagcgactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgaaatcttgccattgcactgcagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaGTATTAGGTGGC i ponAbe2.chr19 I 4912 C 0 s nomLeu3.chr10 102609343 301 - 106955855 ggcatggtggctcaagcctgcaatcccagcactttgggaggcagaggtggggtgatcacttgagctcaggagttcaagaccagcttggccaacaccggtgaaaccccatctctactaaaagtacaaaaattaactgggcgtggtggcaggtgcctgtaatcccagcgactcgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagccgagatcttgccattgcactgcagcctgggtgacagagtgagactccgtctcaaaaaaaaaaa------------gtattaggtggc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=32813.000000 s hg38.chr19_GL949748v2_alt 42342 83 + 1064304 tcattgtgcccaattctgtcctctgtccccagtgaaaagtacaggaagaaGAAAGCCACCATCCTGCCCTACAGCAGATCCCA s ponAbe2.chr19 55847547 83 + 60714840 TCATTGTGCCCAGTTCTGTCCTCTGTCCCCAGTGAAAAGTACAGGAAGAAGAAAGCCACCATCCTGCCCTAGAGCAGATCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609644 83 - 106955855 tcattgtgcccagttctgtcctccgtccccagtgagaagtacaggaagaaGAAAGCCACCATCCTTCCCTAGAGCAGATCCCA i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19529699 81 - 122678785 TCTTTATGCCCAGGTCTGTCCTCTGCCCCAGCTGAGGAGTACCG--AAGAGGAAACCATCATCTTGTCCTCAAGTACCTCTCA i canFam3.chr1 I 47883 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=146613.000000 s hg38.chr19_GL949748v2_alt 42425 232 + 1064304 ACAGAGCTGAGAGTGCAGGTTCCACAGAAAGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTATGGCTAGAGAAGAACAGAGCTGAGCTTAGAGGGGAAGGAAGAGGAGGAAGATTGTTTTCTCCCGGCATCCAAACACAGCTTTTCAACCAGGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG s panTro4.chr19 58976545 231 + 63644993 acagagcTGAGAGTGCAGGTTCCACAGCAGGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTATGGCTAGAGAAGGACAGAGCTGAGCTTAGAAGGGAAGGAAGAGGAGGAAGATTGTTTTCTCCCGGCATCTAAACACAGCTTTTCAACC-GGGGGAGCACCACCCTCACTTCCCATTGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847630 228 + 60714840 ATAGAGCTGAGAGTGCAGGTTCCACAGAAAGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTA-GGATAG---AGGACAGAGCTGAGCTTAGAGGGGAAGGAAGCGGAGGAAGATTGTTTTCTCCCGGCATCCAAACACAGCTTTTCAACCAGGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609727 232 - 106955855 ATAGAGCTTAGAGTGCAGGTTCCACAGAAAGCAGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCCGGGCAGCTGTGGGATCTATGGATAGAGAAGGACAGAGCTGAGCTTAGAGGGGAAGGAAGGGGATGAAGACTGTTTTCTCCTGGCATCCAAACACAGCTTTTCAACCACGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19529780 234 - 122678785 ACAGGGGTGAGAATGAATGTTCCACTGGAAGCTGTTCAAGGTCAGTGGGTTTAACTGGATCAACACCCATCATTCCCCTGGGCAGCTAAGGAGCCTATAAGTACAGAAGGACAGAGAGAGGTC---AGGGGAGGGAGGAAGAGAAAGATTA-TTTCTCCTGGCCTCCAAACACAGGTTATCCACC------AGAAATACCCT-GCTCCGCATCATCTATATCTAGGGATGTCTGAGAAAGTAAAC- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I a score=15648.000000 s hg38.chr19_GL949748v2_alt 42657 22 + 1064304 AGTAGTGGCTTTTTTGTTGTTG s panTro4.chr19 58976776 22 + 63644993 AGTAGTGGCTTTTTTGTTGTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847858 17 + 60714840 AGTAGCGGCTTTTTTGT----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609959 21 - 106955855 AGTAGTGGCTGTTTTGTTTGT- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54915712 18 + 59248254 AGTAGTGGCTTTTTTTTC---- i macFas5.chr19 I 367 C 0 s papAnu2.chr19 47034713 17 + 51301725 AGTAGtggctttttttc----- i papAnu2.chr19 I 363 C 0 s canFam3.chr1 19530014 22 - 122678785 AGTACTTGTTTGTTTTTTTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e rheMac3.chr19 59898033 329 + 64156825 I a score=346230.000000 s hg38.chr19_GL949748v2_alt 42679 132 + 1064304 TTGTTTCACA-ATAATTAGGTCTCCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGACTATTGCACTTTAAACACCATT s panTro4.chr19 58976798 132 + 63644993 TTGTTTCACA-ATAATTAGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGACTATTGCACTTTAAACACCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847875 132 + 60714840 TTGTTTCACA-ATAATTAGGTCGTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGTAATGTTGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGATTATTGCACTTTAAACCCCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609980 132 - 106955855 TTGTTTCACA-ATAATTAGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59898362 132 + 64156825 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i rheMac3.chr19 I 329 C 0 s macFas5.chr19 54915730 132 + 59248254 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47034730 132 + 51301725 ttgtgtcacA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46747871 132 + 50890351 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTCTTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i chlSab2.chr6 I 215 C 0 s canFam3.chr1 19530036 123 - 122678785 -CCTTCCACCTTTAATGTCGGTTTTAGTTGGTGTTTTACAGGGAGGGAA--AATAG-------ATGCTAAGTGTTTCTATAACCAATGGGACAATCAAACATGGTAAAGAAATAATCTCACCTAAAGGCCATT i canFam3.chr1 C 0 I 103 e calJac3.chr22 45325099 2055 + 49145316 I a score=1132441.000000 s hg38.chr19_GL949748v2_alt 42811 504 + 1064304 TGTggccatgcccggtggtgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctgaccaatgtggcgaaaccccgtctctcct---------------------------aaaaatac-----aaaaaaattagccagatggtggcaggtgcctgtagttgcagccacttgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaatgagccgagatcgcaccactgcactctggcctgggcgacaaagcgagactctgtctcaaaacaaacaaacaaacaaaaaaacaaaaaATACCATTTGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagc-agggcggctacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT s panTro4.chr19 58976930 503 + 63644993 TGTggccatgcccggtggcgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctgaccaatgtggcgaaaccctgtctctcct---------------------------aaaaatac-----aaaaaaattagccggatggtggcaggtgcctgtagttgcagctactcgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaacgagccgagatcgcaccactgcactctggcctgggcgacagagcaagactctgtctcaaaacaaacaaacaaacaaaaaa-caaaAAATACCATTTGTGCCCATGTGGAGAAATGTGTGAAGTCCCCATGGTATAGTCTGATGTTTAAAGAACCCCA-CATGgattgaatgcacagc-agggccgctacagttcacaaggctgcactgggtaattataatttgctaagaaggtggaccttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848007 531 + 60714840 TGTGGCCCCCCCcggtggcgcccccctttaatcccaccactttgggggggtgaggcagggggatcacttgaggccaggagtttgagaccagcctggccaatggggggaaaccctgttttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-----aaaaaaataagctggatggtggcaggtgcctgtagttgcagctacttgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaatgagctgagatcgcaccactgcactctggcctgggcgacagagtgagactctgtctcaaaacaaacaaacaaacaaaaaaacaaaAAATACCATTTGTGCCCATGTGGAGAAACATGTGAAGTCTCCATGGTAGAGTGTAATGTTTAAAGAACCCCG-TATGgattgaatgcacagc-agggcggctacagttcacaaggctgcaccgggtaattgcaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610112 500 - 106955855 TGTggccacgcctggtggcgcacacctgtaatcccagcattttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctggccaatgtagcgaaaccccgtctctact---------------------------aaaaatag-----aaaaaaattagccagatggtggcaggtgcctgtagttgcagctacttaggaggctgaggcaggagaatcacttgaacctggcaggcagaggttgcaatgagccgagattgcaccattgcactctggcctgggtggcagagtgagactctgtctcaaaacaaacaaacaaaaaaacaa-----aaaTACCTTTTGTGCCCATGTGGAGAAACATGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCATTATGgattgaatgcacagc-agggcggctacagttcacaaggctgcactgggtaattagaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i nomLeu3.chr10 C 0 I 111 s rheMac3.chr19 59898494 495 + 64156825 TGTggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------caaaatac-----aaaaaaat-ggctgaatggtggcaggtgcccgtagttgcagccactcaggaggctgaggcaggagaatcacttgaccccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctca----aaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAATGTGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54915862 499 + 59248254 TGTggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------aaaaatac-----aaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctcaaaacaaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGCAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47034862 491 + 51301725 tgtggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------aaaaatac-----aaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagtgagagtctgtctca--------aaacaaacaaacaa----aaaataccatttGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGCAGAGTCTGATGTTTAAAGAACCCCA-TATGGATTGAATGCACAGCAAGGGCAGATACAGATCACAAGGCTGCACTGGGTAATTGCAATTTGCTAAGAAGGTGGATCCTAAACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748003 504 + 50890351 TGTggtcaggcgcagtggcatatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaattccgtctctact---------------------------aaaaatacaaaaaaaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctcaaaacaaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAACGTGGGAAGTCCCCACGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattgcaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=99728.000000 s hg38.chr19_GL949748v2_alt 43315 43 + 1064304 GTCACAATGAGTGAAATTTCTTCCTCGGCACACAATTAATTAC s panTro4.chr19 58977433 43 + 63644993 GTCACAATGAGTGAAATTTCTTCCTCGGTACACAATTAATTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848538 43 + 60714840 GTCACAATTAGTGAACTTTCTTCCTTAGTACACAATTAATTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610723 43 - 106955855 GTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTAC i nomLeu3.chr10 I 111 T 111 s rheMac3.chr19 59898989 43 + 64156825 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916361 43 + 59248254 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035353 43 + 51301725 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTCATTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748507 43 + 50890351 ATTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=4108.000000 s hg38.chr19_GL949748v2_alt 43358 4 + 1064304 TTAG s panTro4.chr19 58977476 4 + 63644993 TTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848581 4 + 60714840 TTAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59899032 4 + 64156825 TTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916404 4 + 59248254 TTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035396 4 + 51301725 TTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748550 4 + 50890351 TTCG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102610766 111 - 106955855 T a score=167865.000000 s hg38.chr19_GL949748v2_alt 43362 68 + 1064304 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT s panTro4.chr19 58977480 68 + 63644993 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848585 68 + 60714840 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610655 68 - 106955855 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGACAATCAT i nomLeu3.chr10 T 111 T 111 s rheMac3.chr19 59899036 67 + 64156825 TTAGTAGGAAAGTTCCCAG-AGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATAATCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916408 67 + 59248254 TTAGTAGGAAAGTTCCCAG-AGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATAATCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035400 68 + 51301725 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATCATCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748554 68 + 50890351 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCATTAGCTACATTGTGATAATCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=442165.000000 s hg38.chr19_GL949748v2_alt 43430 195 + 1064304 GTCACAATTAGTGAAATTTCTTCTTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCGTTAGCT-ACATTGTGATACTCATGTCACAATCAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAGGGTTCCCCACCCGTAGGCTTATGGGGGTATA s panTro4.chr19 58977548 195 + 63644993 GTCACAATTAGTGAAATTTCTTCTTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCGTTAGCT-ACATTGTGATACTCATGTCACAATCAATGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAAGTTTCCCCACCCGTAGGCTTATGGGGGTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848653 195 + 60714840 GTCACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGATGGATCTTAAACAGAAAGATTCATTAGCT-ACATTGTGATAATCATGTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAGGGTTCCCCACTCGCAGGTTTATGGGGGTATA i ponAbe2.chr19 C 0 I 9 s nomLeu3.chr10 102610612 195 - 106955855 GTCACAATTAGTGAACTTTCTTCCTTAGTACACAATTAATTACTTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCT-ACATTGTGACAATCATGTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGCAGGAGGGTTCCCCACTCGTAGGTTTATGGGGGTATA i nomLeu3.chr10 T 111 C 0 s rheMac3.chr19 59899103 194 + 64156825 GTCA-AATTAGTGAAATTTCTTCGTTGGTGCAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTGAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916475 195 + 59248254 GTCACAATTAGTGAAATTTCTTCCTTGGTGCAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTGAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035468 195 + 51301725 GTCACAATTAGTGAAATTTCTTCCTTggtgcaaaataaattatttagtagGAAAGGTCCCAGAAGGTGGATCTTAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGCAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748622 191 + 50890351 GTCACAATTAGTGAAATTTCTTCCTTGGTACAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTTA-----AAAAGTCCATTAGTTAACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGATTCCCCACTTGTAGGTTTATGGGGGTATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=110265.000000 s hg38.chr19_GL949748v2_alt 43625 63 + 1064304 ATTGATAAATCAAAATGGAAtatatcaaaacatcacgttgtacacaaatataactccattttt s panTro4.chr19 58977743 63 + 63644993 ATTGATAAATCAAAATGGAAtatatcaaaacatcacgttgtacacaaatataactccattttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102610807 60 - 106955855 ACTGACAAATCGAAATGGAAtatatcaaaacatcatgttgtacacaaatataactccatt--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899297 63 + 64156825 ATTGACAAATCAAAATGGAAtatataaaaacatcacgttgtacacaaatataattccattttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916670 63 + 59248254 ATTGACAAATCAAAATGGAAtatataaaaacatcacgttgtacacaaatataattccattttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035663 63 + 51301725 ATTGACAAATCAAAATggaatatatcaaaacatcacgttgtacacaaatataattccattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748813 63 + 50890351 ATTGACAAATCAAAATGGAAtatatcaacacatcacgttgtacacaaatataattccattttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e ponAbe2.chr19 55848848 9 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I a score=493674.000000 s hg38.chr19_GL949748v2_alt 43688 207 + 1064304 atttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCATATCTCTACAGCAGCCCATGAAAGAGAGAGGGGATCCGTGTTTTAACTTGGATCtgttactggaaaggggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggtgagtacacagagtaaagtgaaggcaagtttatt s panTro4.chr19 58977806 207 + 63644993 atttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCATATCTCTACAGCAGCCCATGGAAGAGAGAGGGGATCCGTGTTTTAACTTGGATCtgttactggaaagaggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggtgagtacacagagtaaagtgaaggcaagtttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848857 207 + 60714840 GTTTGTTGATTAGATCTCAATAAATCTGGAGCAGAAGAGAATTCCGTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCTGTGTTTTAACTTGGATCtgttactggaaaggggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggcgagtacacagagtaaagcgaaagcaagtttatt i ponAbe2.chr19 I 9 C 0 s nomLeu3.chr10 102610867 205 - 106955855 -tttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCGTATCTCTACAGCAGCCCAGGAAAGAGAGAGGGGCTCCATTTTTTAACGTGGATCtgttactggaaagggttcccagtccagaccccaagagagggttcttggatctcacacaagaaagaactcagggcgagtccacggagttta-tggaagcaagtttatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899360 207 + 64156825 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcgagtccacggagtgaaatgaaagcaagtttatt i rheMac3.chr19 C 0 I 317 s macFas5.chr19 54916733 207 + 59248254 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcgagtccacggagtgaaatgaaagcaagtttatt i macFas5.chr19 C 0 I 407 s papAnu2.chr19 47035726 207 + 51301725 atttgtcgaTTAGATCTCAATACATCTAGAGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGTGAGAGGGGCTCCGTGTTTGAACTTGGATCTGTTATTGGAAAGGGGTCCcagtccagaccccaagagagggttctcgGATCTCAGACAAGAAAGAACTCAGGGCGAGTCCAcggagtaaagtgaaagcaagtttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748876 207 + 50890351 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCCCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcaagtccacggagtgaagtgaaagcaagtttatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=830533.000000 s hg38.chr19_GL949748v2_alt 43895 341 + 1064304 aagaaagtcaaggaatatggctgctccataggcagagcagtccagagggctgtcagtcggctatttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagtccctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtggcggtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacgaccagaagtcacttttgttgccatcttggatttggcaggttttggctggcttctttgttgcatc s panTro4.chr19 58978013 341 + 63644993 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcagtcggctatttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagtccctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtggcggtaggagtgtcttttagcatgcaaatgcattataattagcaaataatgcgcagtgaggacgaccagaagtcacttttgttgccatcttggatttggcaggttttggctggcttctttgttgcatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849064 341 + 60714840 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcggtcggctatttttatggttatttcttgatcatatgctgaacaaggggtggactgttcatgagttttccaggaaaggggaggggattttcctggaactgagagttcctccc-tcgtttagcttctggaagttgccatggcatctgtaagttgtcttggtgccagtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacgaccagaagtcacttctgttgccatcttggatttggcaggttttggctggcttctttattgcatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611072 341 - 106955855 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcggtcggctgtttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgaattttccaggaaaggggaggggatttccctggaactgagagttcctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtgctggagggagtgtcttttagcatgcaaatgcatcataattagcaaataatgtgcagtgaggatgaccagaagtcacttttgttgccatcttggatttggcaggttttggctgacttctttattgcatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899884 342 + 64156825 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggtcagctatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaagggcaggggatttccctggaactgagagttcctccctttttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaaggcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i rheMac3.chr19 I 317 C 0 s macFas5.chr19 54917347 342 + 59248254 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggtcggctatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaagggcaggggatttccctggaactgagagttcctccctttttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaaggcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i macFas5.chr19 I 407 C 0 s papAnu2.chr19 47035933 341 + 51301725 aagaaagtcaaAGACGATGgctgctccataggcagagcagtccAGAGGGCTGTCGGTCGgctatttttgtggttatttctcGATCATATGCTAAGCAAGGGGTGGACtgttcatgagttttccaggaaaggggaggggatTTCCCTGGAACTGAGAGTTCCTCCC-CCTATTAGCTTCTGGaagttgccatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749083 341 + 50890351 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggccggcgatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagttcctcct-ccttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcagatgcgttataattagcaaataatgtgcagtgaggacaaccagaagtcacttttgttgccatcgtggttttggcaggttttggctggcttctttattgcatc i chlSab2.chr6 C 0 I 26 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=7736.000000 s hg38.chr19_GL949748v2_alt 44236 11 + 1064304 tttg--tgtcttt s panTro4.chr19 58978354 11 + 63644993 tttg--tgtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849405 11 + 60714840 tttg--tgtcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611413 11 - 106955855 tttg--tgtcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900226 13 + 64156825 tctcttttttttt i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54917689 12 + 59248254 tctc-tctttttt i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47036274 11 + 51301725 tctc--ttttttt i papAnu2.chr19 C 0 I 11 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46749424 26 + 50890351 I a score=366991.000000 s hg38.chr19_GL949748v2_alt 44247 144 + 1064304 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagcctcaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctct---- s panTro4.chr19 58978365 144 + 63644993 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctct---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849416 148 + 60714840 gggtctttgtgacctgtgtgttgtgacccgtctcatcgtgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccggccccggttcaagatggagtcactctggtttgaaggcctctgaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611424 148 - 106955855 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctccgaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900250 148 + 64156825 gggtctttgtgatctgtatgttgtaacctgtctcatcctgtgacttagaaagtcttaaccccctgggaatgcagtccagcaggtagcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctctgaca i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54917712 148 + 59248254 gggtctttgtgatctgtatgttgtaacctgtctcatcctgtgacttagaaagtcttaaccccctgggaatgcagtccagcaggtagcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctctgaca i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47036296 148 + 51301725 ggGTCTTTGTGATCTGTATGTTGTgacctgtctcatcctgtgacttagaaagTCTTAACCCCCTGGGAATGCAGTCCAGCAGGTtgcagcctcagtttacccagcCCCggttcaagatggagtcactctggtttgaaGGTCTCTGACA i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 46749450 148 + 50890351 gggtctttgtgatctgtatgttgtgacctgtctcatcctgtgacttagaaagtcttaaccccctgggaacacagtccagcaggttgcagcctcagtttacccagccccagttcaagatggagtcactctggtttgaaggtctctgaca i chlSab2.chr6 I 26 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=442040.000000 s hg38.chr19_GL949748v2_alt 44391 157 + 1064304 gaTTCACCTGGAGACACATTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTACGGCAGCCAGACCCAGTCGTACGAAGTTACCCAGGGAGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA s panTro4.chr19 58978509 157 + 63644993 gaTTCACCTGGAGACACATTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTCGTACGAAGTTACCCAGGGAGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849564 157 + 60714840 GATCCACCTGGAGACACCTTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTCGATGTGGTATCTGGGGGAACTGAAAGAGAGAAGGGTCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611572 157 - 106955855 GATCCACCTGGAGACAACTTCCGGCTGTACCAGGCCTCCATCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTTGTATGAAGTTACTCAGGGTGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900398 157 + 64156825 GATCCACCCGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54917860 157 + 59248254 GATCCACCCGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036444 157 + 51301725 GATCCACCTGGAGACACCTTTCTGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAACCAAAATCATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749598 157 + 50890351 GATCCACCTGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGTGAGAAGGGGCTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19530262 157 - 122678785 GATCCTTGTGGAGAATCCTCCTGGCTATACCAGGCTTCAGCCAGCAAAATCCCAGTGATAATCAGAAACATGGTAATGAGACACAGCGGGATGAGGTTAACCTTGGTGTAATCCCCCAATGTGGCACCTGGGAAAACTGAAAGAGAGAATGAGATCA i canFam3.chr1 I 103 C 0 e calJac3.chr22 45325099 2055 + 49145316 I a score=256651.000000 s hg38.chr19_GL949748v2_alt 44548 78 + 1064304 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTATCAT-CACCCACTTAATGTTTTC s panTro4.chr19 58978666 78 + 63644993 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTGTCAT-CACCCACTTAATGTTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849721 78 + 60714840 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTATCAT-CACCCACTTAATGTTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611729 77 - 106955855 GCACTGACCCTCAGA-GGTATCCCTCCTTCTCAAATGGCCCCGCCAAATCTGACTCTCAT-CACCCACTTAATGTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900555 78 + 64156825 GCACTGACCCTCAGAGTGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918017 78 + 59248254 GCACTGACCCTCAGAGTGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036601 78 + 51301725 GCATTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCActtaatgttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749755 78 + 50890351 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGTTTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327154 78 + 49145316 gCACTGACCCTCAGAGCGTATCCCTCCTTCTCAAACAGTCCCGCCAAATCTCTCTCGCAT-CAGCCACTTCATGTCTTC i calJac3.chr22 I 2055 C 0 s canFam3.chr1 19530419 67 - 122678785 TCACTG-----------GTATCCCTTCTTCTCAAATAGGTCTACCGAATGTGACTCTCACACACCCACTT-GTGTTTCC i canFam3.chr1 C 0 I 1673 a score=849774.000000 s hg38.chr19_GL949748v2_alt 44626 300 + 1064304 -------------------------GG----ttttttggtttttttttttgagacggagttttactcttgttgaccaggctggagtgcagtggtgtaatctcagctcaccacaacctctgcctcccaggttcaagc---ctccctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccggctaa--ttttatatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcc s panTro4.chr19 58978744 300 + 63644993 -------------------------GG----ttttttggtttttttttttgagacggagttttactcttgttgaccaggctggagtgcagtggtgtaatctcagctcaccacaacctctgcctcccgggttcaagc---ctccctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccagctaa--ttttatatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849799 306 + 60714840 -------------------------GGGGttttttttgtgttttttttttgagacggagttttgctcttgttgaccaggctggagtgcagtggtgtaatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggcgtgtgccaccatgcccggctaa--ttttatatttttagtagagacggggtttcgccatgttggtcaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattaca-gtgtaagccacagcgcctcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611806 303 - 106955855 -------------------------GG----Gtttttttgttttgtttttgagatggagttttgctcttgttgcccaggctggagtgcagtggtgcaatctcggctcaccacaacctctgcctccccggttcaagcaattctcctgcctcggcctcccaagtagctgggattatgggcatgtgccaccatgcccggctaa--ttttttatttttagtagagatggggttttgccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgggagccactgctccttgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900633 299 + 64156825 -------------------------gg----ttttgggg----tttttttgagacagaattttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcccgggttcaagcaattctcctgcttcaggctcccaagtagctgggattacaggcatgtgccaccaagcccagctaa--ttttatatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918095 299 + 59248254 -------------------------GG----TTTTGGGG----tttttttgagacggaattttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcccgggttcaagcaattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccaagcccagctaa--ttttatatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036679 299 + 51301725 -------------------------gg----ttttgggg----tttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggtacaatctcagctcactgcaacctctgcctcccgggttcaagcaattttcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccaagtccagctaa--ttttatatttttagtagagacagggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749833 300 + 50890351 -------------------------GG----TTTTGGGG---ttttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggtgcaatctcagctcaccgcaacctctgcctcccggattcaagcaattctcctgcttcagcctcccaagtagctgggattataggcatgtgccaccaagcccagttaa--ttttatatttttagtagagacggggttttgccatgttggtcagactggtctcaaactcccaacctcagttgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgaaccaccacacctggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327232 328 + 49145316 TAGCCAGCAGTCCACTGTACTTTAAAG----TGtttttttttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcacgtgccaccatgcccagctaagtttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcggcctcccaaagtgctgggattattggcgtgagccaccgcgcccggcc i calJac3.chr22 C 0 T 345 e canFam3.chr1 19530486 1673 - 122678785 I a score=96224.000000 s hg38.chr19_GL949748v2_alt 44926 33 + 1064304 ACCCACTTAATGTTTTCTAGCCAGTAGTCCACT s panTro4.chr19 58979044 33 + 63644993 ACCCACTTAATGTTTTCTAGCCAGTAGTCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850105 33 + 60714840 ACCTACTTAATGTTTTCTAGCCGGTAGTCCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102612109 33 - 106955855 ACCCACTTAATGTGTTCTAGCCGATAGTCCACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900932 33 + 64156825 ACCCACTTAATGTTTTCTAGCCAGTCGTCCACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918394 33 + 59248254 ACCCACTTAATGTTTTCTAGCCAGTCGTCCACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036978 33 + 51301725 accCACTTAATGTTTTCTAGCCAGTCGTCCACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750133 33 + 50890351 ACCCACTTAATGTTTTCTAGCCACTCGTCCACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327215 33 + 49145316 AGCCACTTCATGTCTTCTAGCCAGCAGTCCACT i calJac3.chr22 T 345 I 312 e canFam3.chr1 19530486 1673 - 122678785 I a score=1562945.000000 s hg38.chr19_GL949748v2_alt 44959 595 + 1064304 GTACTTTAAAGTTTTAATT-----------------GAACttttt-------ttttttcttgagatcaagttttgctcttgttgcccagactggagtgtaatggcacaatctcagctcactacaacctctgcctcccgggttcaagtgattctcctgtctcagcctcccaagcagctgagattatgagcatgtgccaccacacccggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgttgggattataggcataaaccaccatgcctggccATAAT-TGAGCTCTTTA-AAGTTTTAATCCCTGAAAACAAAAGATGGAATCt---ttgttgttgtt--tttgagacgacgtctcactctgttgctcaggctggagtgcagcgacgcagtctcggttcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctaggattacaggcacctaccaccacacccggctaattttt-----------------gtatttttaatagagatgggttttcgccatgttggccaaactggtttcgaactcctgg s panTro4.chr19 58979077 594 + 63644993 GTACTTTAAAGTTTTAATT-----------------CAACttttt-------ttttt-cttgagatcaagttttgctcttgttgcccagattggagtgtaatggcacaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgtctcagcctcccaagcagctgagattatgagcatgtgccaccacacccggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgttgggattataggcataaaccaccatgcctggccATAAT-TGAGCTCTTTA-AAGTTTTAATCCCTGAAAACAAAAGATGGAATCt---ttgttgttgtt--tttgagacgacgtctcactctgttgctcaggctggagtgcagcgacacagtctcggttcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctaggattacaggcacctaccaccacacccggctaattttt-----------------gtatttttaatagagatgggttttcgccatgttggccaaactggtttcaaactcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850138 594 + 60714840 GTGCTTTTATGTTTTAATT-----------------GAACttttt-------ttttt-cttcagatagagtttcgcttttgttgcccaggctggagtgcaatggcacaatctcggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagcagctaagattacgagcatgcgccaccacacctggctaattt-tgtatttttagtagaga-tggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtaatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccATAAT-TGAACTCTTTA-AAGTTATAATCCCTGAAAACAACAGATGGAATCt---ttgttgttgtt--tttgagacaaagtctcgctctgtcgctcaggctggagtgcagagacaaaatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctgggattacaggcacctgccaccacacccggctaattttt-----------------gtatttttagtagagatgggttttcgccatgttggccaaactggtttcaaactcctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102612142 591 - 106955855 GTACTTTTATGTTTTAATT-----------------GAACttttt-------ttttt-cttgagatggagttttgcttttgttgcccagactggagtgcaatggcgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcctgagcagctaagattatgagcatgcgccaccacacctggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcccggccATAAT-TGAACTCTTTA-AAGTTTTAATCCCTGAAAACAACAGATGGAATCt------ttgttgtt--tttgagatggagtctcgctctgtcacccaggctggagtgcagcgacacaatctcggctcactgcaccctccacctcctgggttcgagtgattctcctgcctcagcctcccgaatagctgggactacaggcacctgccatcacacccggctaattttt-----------------gtattttcagtagagatgggttttcgccatgttggccaaactggtttcaaactcctgG i nomLeu3.chr10 C 0 M 1602 s rheMac3.chr19 59900965 580 + 64156825 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagacta------ggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccatgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttattgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacctgtcaccacgcctggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918427 586 + 59248254 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagactagagtgcggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcaacctcccgagtagctgggattacaggcataagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccatgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacctgtcaccacgcctggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037011 586 + 51301725 GTACTTTAAAGTTTTAAtt-----------------gaactttgt-------ttttt-gttgagatggagttttgctcttgttgcctagactagagtgtggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattatcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgaggcaccatgcccagccataat-tgaactcttta-aaattttaatccctGAAAACAAAAGATGgaatctttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctctcgaatagctgggattacaggcatctgtcaccatgtccggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750166 582 + 50890351 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagactagagtgcagtggcacaatctcagctcactgcaacctctggctcccgggttcaagcaattctcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccggctaattt-tgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccgtgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgaatagctgggattacaggcacctgtcaccacgcccggctaattttg-----------------atatttttagtagagatgggttttcttcatgttggccaaactgatttcgaa---ctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327560 626 + 49145316 GAACTTTAAAGTTTTAATCCCTGAAAACAAGAGACGGAATCttttgttgttgttgtt-gttgagatggagtctccctc-tgttgcccaggctggagtgcagtggcacaatcctggctcactgcaacctccacctcccaggttcaagcaatgctcctgcctcagcctcctaagtggctgagattacaaatgcccgccagcatgcctggctgatttttgtacttttagtagaga-tgacttttcaccatgttggccacactaatctcgaacttctggcctcaggtgacccagcagcctcggcctcccaaagtgctgtgattacgggcatgagccaccgcacctggccAAAATATGGAATCTTAATGAGTTGTAGT----------------GGGAGTTCCttttctttttatttgtctgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagttcactgcaacctctgcctcccaggttcaagtgattcccctgcctcagcttcccgagtagctggaactacaggtacacaccaccacgcctggctagttttgtgtgtgtgtgtgtgtgtgtatttttagtagaggcggggttttaccatattggccaggctggtcttgaactcctga i calJac3.chr22 I 312 C 0 e canFam3.chr1 19530486 1673 - 122678785 I a score=98551.000000 s hg38.chr19_GL949748v2_alt 45554 43 + 1064304 cctcaagtgattcgcctgcctcggcctcccaaggtgctgggat s panTro4.chr19 58979671 43 + 63644993 cctcaagtgattcgcctgcctcggcctcccaaggtgctgggat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850732 43 + 60714840 cctcaagtgattcgcctgcctcggcctcccaaagtgctgggat i ponAbe2.chr19 C 0 I 5965 s rheMac3.chr19 59901545 43 + 64156825 ccttaagtgattcgccggccttggcctcccaaagtgctgggat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919013 43 + 59248254 ccttaagtgattcgccggccttggcctcccaaagtgctgggat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037597 43 + 51301725 cctcaagtgattcgtctgcctcggcctcccaaagtgctgggat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750748 43 + 50890351 cctcaaatgattcacctgcctcagcctcccaaagtgctgggat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328186 41 + 49145316 cctca--tgatctgcccgcctcggcctcccaaagtgctgggat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19530486 1673 - 122678785 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=57794.000000 s hg38.chr19_GL949748v2_alt 45597 45 + 1064304 tacaggcctgagccaccgcgcccggccAAGATATGCAATCCTAAT s panTro4.chr19 58979714 45 + 63644993 gacaggcatgagccaccgcgcccagccAAGATATGCAATCCTACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901588 45 + 64156825 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919056 45 + 59248254 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037640 45 + 51301725 gacaggcatgagctaccgcacctggccaaaacatGGAATCCTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750791 45 + 50890351 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328227 27 + 49145316 tataggtgtgagccactgtgcctggcT------------------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19530486 1673 - 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=588117.000000 s hg38.chr19_GL949748v2_alt 45642 295 + 1064304 GAGTTGTAATGGGAG-TTCCTTTATCTTCCTTCCTTGATATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTCCCGCATCCTTATGTTAAGGAATAGTCTT-GGGGCAGCACATGAGACGGAAGGAGCTCTACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTCGCAGCCCACACTGCTGTGCA-GCAGTGCACCTGAGAAAGTTTGAGTT--GAggccgggcacagtagc--tcacgcctgtaatcccagc s panTro4.chr19 58979759 295 + 63644993 GAGTTGTAATCGGAG-TTCCTTTATCTTCCTTCCTTGATATTCACTCCACCTTAGCTCTCTTCCTTCATTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTCCCGCATCCTTATGTTAAGGAATAGTCTT-GGGGCAGTACATGAGACGGAAGGAGTTCTACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTCGCAGCACACACTGCTGTGCA-GCAGTGCACCTGAGAAAGTTTGAGTT--GAggccgggcacagtagc--tcacacctgtaatcccagc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901633 297 + 64156825 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatcccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919101 297 + 59248254 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037685 297 + 51301725 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACattgcc-ttttctccttccccatcCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTgagtt--gaggccaggcacagtggc--tcacacctgtaatcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750836 297 + 50890351 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTAGGGGCATCACGTGAGACGGAAGGAGCTCCACAGAGCCCTGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatgccagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328254 289 + 49145316 ---------TGGGAG-TTCCTGTATCTTCCTTCCTTGATATTCTCTCCACCTTAGCTGTCTTCCTTCATTTATTTGCTCTTTGTCCTATTCGCACCTTCCCACACTCCCTTTTTTTCCTTCCCCATCCTTATATCAATGAATAGTCTCAGGAGCAGCACATGAGAGGGAAAGAGCTCCACAGGGCCCCGAA----TTCCGTGGCTGGGTCAG-------CATCCTCACAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGGT--GAggccgggcacagtggc--ccgcgcccgtaaccccagc i calJac3.chr22 C 0 C 0 s canFam3.chr1 103183131 308 + 122678785 GAGTTGTAGTGGGGTCTTCCTTTGCCTTCTTCCCTCTGTGTTCTCTCTGCTTTATCTCTCTTCTTGTGTTTCTTTGCTCTTCATCTCATTTCCACCCTCCCACACTGCC-ATTTCCCCTTCTCCCTCCTTGTGGTAGGAATCAGGCTTAGGAGGAACCCCTACAACCCAAGTTGCTGCACAGAGCGCTGAAGTACCTCAGTGGCTGCGTCTGCTCCCCTCCTCCTGCCAAGACTTACTGCCG-----CCAGGGAGCTCAAGAAGACTCAAGCTTAGAGGCTGAGCATCAGGACCACCATGCATTTCATTTCAGC i canFam3.chr1 T 1206 I 1686 e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=358693.000000 s hg38.chr19_GL949748v2_alt 45937 210 + 1064304 actgtgggaggctaaggtaggaggattgcttgaggccaggagtttgagagcagcctgggcaacatggcgaaaccccatgtctactaaaaatacaa------------aaaaattagccgggtgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaattacttgacctgggcctggggttg-gggggtggaggctgcagtgagctc s panTro4.chr19 58980054 210 + 63644993 actgtgggaggctaaggtgggagaattgcttgaggccaggagttcgagagcagcctgggcaacatggcgaaaccccatgtctactaaaaatacaa------------aaaaattagccgggtgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaattacttgacctgggcctggggttg-gggggtggaggctgcagtgagctc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901930 210 + 64156825 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcccgggtaacatagcaaaaccccatgtctactaaaaatacaa------------aatacggagccaggtgtggtggcgggtgcctgtaatcccagctactccggaggctgaggcaggagaatcacttgacccgggcctggggttg-ggagttggaggctgcagtgagccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919398 210 + 59248254 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcctgggtaacatagcaaaaccccatgtctactaaaaatacaa------------aatacgtagccaggtgtggtggcgggtgcctgtaatcccagctactccggaggctgaggcaggagaatcacttgacccgggcctggggttg-ggagttggaggctgcagtgagccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037982 210 + 51301725 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcaagagcagcctgggcaacatagcaaaaccccatgtctactaaaaatacaa------------aaaaagtagccgggtgtggtggcgggtgcctataatcccagctactccggaggctgaggcaggagaatcgcttgacctgggcctggggttg-gggggtggaggctgcagtgagccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751133 210 + 50890351 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcctgggcaacatagcaaaagcccatgtctactaaaaatacaa------------aaaaagtagccgggtgtggtggcgggtgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttgacccgggcctggggttg-gggggtggaggctgcagtgagccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328543 223 + 49145316 actgtgagaggccgaggcgggaggattgcttgaggctgggagctcgagaccagcctgggcaacatggtgaaaacccatctctactaaaagtacaaaaaaaaaaaaacaaaaattaactgggagtagtggagggtgcgtgtaatcccagctacttgggaggctgagacaggagaatcgcttgacccaggcctggggggatgggggcaggggctgcagtgagccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=136595.000000 s hg38.chr19_GL949748v2_alt 46147 119 + 1064304 agattgtgccactacactccagcttgggcgacagagtgagactccatctcaaagaaaacaaacaaacaaacaaaaccctagcctccagattttcagggaggctgatttgagtaataata s panTro4.chr19 58980264 119 + 63644993 agattgtgccactacactccagcttgggcgacagagtgagactccatctcaaataaaacaaacaaacaaacaaaaccctagcctccagattttcagggaggctgatttgagtaataata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59902140 112 + 64156825 agattgtgccactacactccagctcatgtgatagaatgagactccatctcaaagaa-------aaacaaacaaaaCCCTAGCCTGCAGattttcagggaggctgatttgagtaataata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919608 112 + 59248254 agattgtgccactacactccagctcaggtgatagaatgagactccatctcaaagaa-------aaacaaacaaaaccctagcctgcagattttcagggaggctgatttgagtaataata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038192 116 + 51301725 agattgtgccactacactccagctcaggtgatagagtgagactccatctcaaagaa---aaacaaacaaacaaaaccctagcCTGCAGATTttcagggaggctgatttgagtaataata i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45328766 112 + 49145316 ggatcgtgccactgcactccagcttgggcatcacagtgagactccatctcaaagaa-------aagcaaacaaaaccctaacctccagattttcagggaggctggttggagtaataatg i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M e chlSab2.chr6 46751343 0 + 50890351 C a score=20907.000000 s hg38.chr19_GL949748v2_alt 46266 24 + 1064304 aaactctgattggccaggtgcagt s panTro4.chr19 58980383 24 + 63644993 aaactctgattggccaggtgcagt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59902252 24 + 64156825 aaactctgatgggccaggtgcggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919720 24 + 59248254 aaactctgattggccaggtgcggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038308 24 + 51301725 aaactctgattggccaggcgcggt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e calJac3.chr22 45328878 0 + 49145316 C e nomLeu3.chr10 102612733 1602 - 106955855 M e chlSab2.chr6 46751343 0 + 50890351 C a score=30516.000000 s hg38.chr19_GL949748v2_alt 46290 23 + 1064304 ggctcatgcctgtaatcccagca s panTro4.chr19 58980407 23 + 63644993 ggctcatgcctgtaatcccagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102614335 23 - 106955855 ggctcacgcctgtaatcccagca i nomLeu3.chr10 M 1602 C 0 s rheMac3.chr19 59902276 23 + 64156825 ggctcacacctgtaatcccagca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919744 23 + 59248254 ggctcacacctgtaatcccagca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038332 23 + 51301725 ggctcacgcctgtaatctcagca i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e calJac3.chr22 45328878 0 + 49145316 C e chlSab2.chr6 46751343 0 + 50890351 C a score=322364.000000 s hg38.chr19_GL949748v2_alt 46313 192 + 1064304 ctttgggaggcccaagcgggcagatcacgaggtcaggagttcgagaccagcctggccaatatggtaaaaccccatctctactaaaaatac-----aaaaattagccaggcagggtggc--acacatatagtcccagctactcgggaggctgaggcagaagaatcgtttgaacctgggaggcagaggtttcattgagccg s panTro4.chr19 58980430 192 + 63644993 ctttgggaggcccaagcaggcagatcacgaggtcaggagttcgagaccagcctggccaatatggtaaaaccccatctctactaaaaatac-----aaaaattagccaggcagggtggc--acgcacgtagtcccagctactcgggaggctgaggcagaagaatcgtttgaacctgggaggcagaggtttcattgagccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55856740 192 + 60714840 ctttgggaggccgaggtgggcagatcacaaggtcaggagtttgagaccagcctggccaatatggtaaaaccccatctctactgaaaatac-----aaaaattagccaggcatggtggc--acgcacgtagtcccagctactcaggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtttcagtgagcca i ponAbe2.chr19 I 5965 C 0 s nomLeu3.chr10 102614358 199 - 106955855 ctttgggaggccgaggcgggcggatcacaaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaaaaaaattagcctggcgtggtggcgggtgcctgtagtctcagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgccatgagctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902299 192 + 64156825 ctttgggaggccgaggagggcagatcacgaggtcaggagtcggagaccagcctggccaatatgggaaaaccccagctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtgtcagtgagccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919767 192 + 59248254 ctttgggaggctgaggagggcagatcacgaggtcaggagtcggagaccagcctggccaatatggtaaaaccccatctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtttcagtgagccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038355 192 + 51301725 ctttgggaggccgaggcgggcagatcacgaggtcaggagtcggagaccagtctggccaatatggtaaaaccccatctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacccgggaggcagtggtttcagtgagccg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45328878 0 + 49145316 C e chlSab2.chr6 46751343 0 + 50890351 C a score=144535.000000 s hg38.chr19_GL949748v2_alt 46505 70 + 1064304 agatcgcgccactgcactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaa--a s panTro4.chr19 58980622 70 + 63644993 agatcgcgccactgcactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55856932 72 + 60714840 agatcacgccactgtactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaaATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102614557 71 - 106955855 agatcataccactgcactccagcctgggcgacagagcgagactctgtctt----aaaaaaaaacaaaaaacaaa--a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902491 76 + 64156825 agatcacgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaa-aaaaaacaaaaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919959 73 + 59248254 agatcacgccactgcactccagcctgggcgacagagtgagactccatctc---aaaaaaaaaa-aaaaaacaaaaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038547 69 + 51301725 agatcacgccactgcactccagcctgggcgacagagtaagactccatctc-------aaaaaa-aagaaacaaaaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751343 72 + 50890351 agatcacgccactgcactccagcctgggcgacagagtaagacttcatctc----aaaaaaaaa-aaaaaacaaaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45328878 0 + 49145316 C a score=3038111.000000 s hg38.chr19_GL949748v2_alt 46575 1085 + 1064304 aaactctggtctcccacttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccaggcacccggcaagaGCTGTAATGTAACTCATTACAGCAGTTACAATAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAA---TAAAAGACATGGGTAGACTTCGCATCCACGGCATAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAtttttttttttaatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaattctccagcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacatgactgAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACgccatgcacagtggttcacacctgcaatcccagccctttgggaggccgaggtgagtggatcacctgaggccaggggttcaagaccagcctggtcaacatggtcagaaccccatctctact-aaaaatacaaaaattagccaggcgtggtggtgggcacatgtaatcccagctactcaagtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccaccctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaaacaaaacaaaaaaCCAAAACGCTAAGAGATGCAAAGACTGGTAGAAGGAATCTGGTGCTGGTAGATTCATAATTTTCAAAAACAGCCTAGAAATTTTCCAAGGATGTAGTATAACAAAAAGGCAAAGGAGggccgggcacggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacacggtgaaaccttcatcgctact-aaaaatag-aaaaattagccggatg-ggtggtgcaggcctgtaatcct s panTro4.chr19 58980692 1083 + 63644993 aaactctggtctcccgcttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccaggcacccggcaagAGCTGTAATGTAACTCATTACAGCAGTTACAACAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAA---TAAAAGACACGGGTAGACATCGCATCCACGGCATAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttttt--aatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaattctccagcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacATAACTGAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACGTCATgcacagtggttcacacctgcaatcccagcactttgggaggccgaggtgagcggatcacctgaggccaggggttcaagaccagcctggtcaacatggtcagaaccccatctctact-aaaaatacaaaaattagccaggcgtggtggcgggcacctgtaatcccagctactcaagtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccaccctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaaacaaaacaaaaaaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTTTCCAAGAATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacacctgtaatcccagcacttcgggaggcctaggcaggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacatggtgaaaccttcatcgctact-aaaaatag-aaaaataagccggatg-ggtggtgcaggcctgtaatcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55857004 1066 + 60714840 AAActctggtct---gcttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccgggcacccagcaaga--------ggaactcattacagcagttacaACAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGCTAAAAGACATGGGTAGACATCG-ATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGAttattttttttt-taatttgaaactgggtctcactatgttg-cccaggctggtttcaaa-ctcctgggctcaagcaattctccagcctcagcctcccgaagtgctgggattacaggcctgagtcaccgcgcATGACTGAGAAAGA---ATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACATgccaggcacagtggttcacacctgcaatcccagcactttgggaggccgaggtcagtggatcacatgaggccaggggttcgagaccagcctggtcaacatggtgagaaccccgtctctact-aaaaatacaaacattagccacgcgtggtggcaggcacctgtaatcccagctactcaggtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaacaaaatgaaacaaaacaaaa--------caaaaTGCTAAGCAATGCAAAGAATGGTGGAAGGAATCTGGTGCTGCTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAAC-AAAAGGCAAAGGAGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcaagaccagcccttgtcaacatggcaaaaccttcatcactactaaaaaatagaaaaaattaaccggatg-ggtggtgcaggcctgttatcct i ponAbe2.chr19 C 0 T 6164 s nomLeu3.chr10 102614628 1069 - 106955855 aaactctggtctcccgcttacctggctcaatgtgtattaaactcctttctgcaattc--ctgtcttgatgaatgggcttcatccgggcagcaggcaaga--------ggaactcattACAGCAGTTTCAACAG-ATGCAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTC---AGAATTCTAGCAGTCAGTGCTAAAAGACATGGGTAGACACCGAATCCATGGCACAGAAGCAGGAGGCTGTGCCAACACCATGTTCTGAGGATGAGATAAttctttttt--aatttgaaactgggtctcactatgttgccccaggctggtctcaaagctcctgggctcaagcaattctccatcctcagcctcccaaagtgctgggattacaggcctgagccactgcacATGACTGAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACgccaggcacggtggttcacacctgcaatcccagcactttgggaagccaaggtgagcgcatcacctgaggccaggggttcgagaccagcctggtcaacatggtgacaaccccgtctctact-aaaaatacaaaaattagccaggcgtggtggcgggcacctgtactcccagcttctcaggtggctgaggcagaagaattgcttaaacttgggaggcagag------gtgagctgagatcgtaccactgcactccagcctgggcgacagagcaagagtccgtctcaaaaacaaaacgaaacaaaacaaaataaaaaaCAAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcgcagtggctcacgcctgtaatcccagcactttgggacgccgaggcgggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacatggcgaaaacttcatcgctact-aaaaatag-aaaaattagccggatg-ggtggtgctggcctgtaatcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902567 1077 + 64156825 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatgggcttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaATAG-ATGAAAAATAATTT--AGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCGGTGTTAAAAGACATGGGTAGACCTCGCATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGAAAAttttttt----aatttgaaactgggtctcactatgttg-ccaaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgggattacaggcctgagccaccacgcATGACTGAGAAAGAATTACTGAGAGTGAAATCATTAACACGAAGGAAAAAAAAAGAAAAAAGAAAAACACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctgggcaacgtggtgagaaccacatctctact-aaaaatacaaaaattagctgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccgctgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtcgtgcaggcctgtaatcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54920032 1077 + 59248254 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatgggcttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaATAG-ATGAAAAATAATTT--AGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCGGTGTTAAAAGACATGGGTAGACCTCGCATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttt----aatttgaaactgggtctcactatgttg-ccaaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgggattacaggcctgagccaccacacATGACTGAGAAAGAATTACTGAGAGTGAAATCATTAACACCaagaaaaaaaaaagaaaaaagaaaaaCACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctggtcaacgtggtgagaaccccatctctact-aaaaatacaaaaattagctgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacgcctgtaatcccagcactttgtgaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtcgtgcaggcctgtaatcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038616 1075 + 51301725 acactcTGGTCTCCCGCTTACCTGACTCAATGTGTGTTGAACTCCTTCTTGCAATTCCTCTGTCCTGATGAATGGGCTTCATCCAGGCAGCCAGCAAGA--------GGAACTCGTTACAACAGTTACaacag-atgaaaaataatttacagagTTGAGGAAGTGGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGTTAAAAGACATGGGTAGACCTCACATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGgatgagataatttttta----aatttgaaactgggtctcactatgttg-cccgggatggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccacagtgctgggattacaggcctgagccaccacgcatgACTGAGAAAGAATTATTGAGAGTGAAATCATTAacaccaaggaaaaa-----aaaaaacaaaaacacgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctggtcaacgtggtgagaaccccatctctactaaaaaatacaaaaattagccgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaacctcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaccaaaacgCTAAGAGATGCAAAGAATGGTAGAAGGAACCTGGTGCTGGTGGattcataattttcaaaaacagcCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAaggagggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataatccagatg-ggtggtgcaggcctgtaatcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751415 1072 + 50890351 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatggacttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaACAG-ATGAAAAATAATTTACAGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGTTAAAAGACATGGGTAGACCTCACATCCATAGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttt----aatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgagattacaggcctgagccaccacgcATGTCTGAGAAAGAATTACTGAGAGTGAAATCATTAACACCaagaaaa-------aaaaaaaaaaaaCACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcggatcacctgaggccaggggttcgagaccagcctggtcaacgtgatgagaaccctatctctact-aaaaatacaaaaattagccgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggtagaggttgcagtgagctgaggtcgcaccactgcactccagcctgggcaacagagtgagattctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTAGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccaggcatggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatatcaggagttcaagacaag-cctagtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtggtgcaggcctgtaatcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328878 1071 + 49145316 aaactctggtctcccacctacctggctcagtgtgtattaaactctttcttgcaatttctttgtcttgatgaatgggcttcatctgggcagccaccaaga--------ggaacccgttatgacagttacaTCAGCATGAAAAATAATTTATAGAGCTGAGGAAGCAGAGTGCTAGCATCCAGTAAGGCAGAACTCTTGCAGGAAACAAGATACTGTCGGAAGAATTATAGCAGTCAGTGCTGAAAGATGTGAGTAGACATCACATCCGTGGCACAGAAGCAGGAGGCTGTGCAAACGCCATGTTCTGAGGATGAGAGAAttgtttttta-aatttgaaactgggtctcactgtgttg-cccaggctggtctcaaa-ctcctgggctcaagcgatcctccagcctcagcctcccaaactgctgggattacaggcctgagccaccgtgcctgacTGGGAAAGAATTATTGAGAGTGAAATCACTAACTCCAA------------GAAAAAACAAAACCCAccaggttcggcggttcacatgtacaatgccagcactttgggaggctgaggtgggcagatcacttgaggccaggggttcgagatcagcctggtcaacatggtgagaaccccgtctctact-aaaaatacaaaaattagccaggcgtg---gtgggcgcctgtagtcccagctaatcaggtggctgcggcagg-gaatccctcgaactcaggaggcagaggttgcagtgagccgagattgcaccactgcattccagccagggtgacagagagagactccatctcacaaa-------aaacaaaGCTAAT-----AACCAAAACGCTAAGAGATGCAAAGACTGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTTAAGAACAGCCTAGAAATTATCCAAGTATCTAGTACAACAAAAAGGTAAAGGAGggcaggacgcagtggctcacgcctgtaaccccagcacttt--gaggccaaggcaggttgatca--taagatcaggagttcgaaaccag-cctgaccaacatggtgaaac-tccatctctact-aaaattac-aaaaattagccaggtgtggtggcgtgtgcctgtagtccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I a score=260751.000000 s hg38.chr19_GL949748v2_alt 47660 125 + 1064304 agctacttgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagcgaagatcgcgccattgcactccatcct-ggcaacagagtgagactccatttcaaaaaaaaaaa s panTro4.chr19 58981775 125 + 63644993 agctacttgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagatcgcaccattgcactccatcct-ggcaacagagtgagactccatttcaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615697 125 - 106955855 agctactcgggaagctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagatcgcaccattgcactccatcct-ggcaacacagtgagactccatttcaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903644 124 + 64156825 agctactcgggaggttgaggtaagagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagatcgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54921109 124 + 59248254 agctactcgggaggttgaggtaagagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagatcgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i macFas5.chr19 C 0 I 905 s papAnu2.chr19 47039691 124 + 51301725 agctactcgggaggttgaggtaggagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagaccgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752487 113 + 50890351 agctactcgggaggttgaggtaggagaatcacttgaaccagg-aggtggaggtggcagtaagccaagattgtgccactgcactccatcct-ggcaacagagtgagacgccatt-----------aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45329949 126 + 49145316 agctacttgggaggctgaggcaggagaatcacctgaatccaggaggcagaggttgcagtgagccaagatcttgccattgcactccagcctgggtgacagagtgagactctgtctaaaaaaaaaaTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T a score=19653.000000 s hg38.chr19_GL949748v2_alt 47785 54 + 1064304 aaaaa-aaaaaaGGCAAAGGAGTGGAAATTGT------GAAAGGGAGgtttttttgttgtt s panTro4.chr19 58981900 48 + 63644993 aaaTA-------GGCAAAGGAGTGGAAATTGT------GAAAGGGAGGTTtttttgttgtt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615822 56 - 106955855 aaaaaaaaaaaaGGCAAAGGAGTGGAAATTGTTAAGGGGAAAGGGAAGCttttt-----tt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903768 34 + 64156825 --------aaaaGGCAAAGGAGTAGAAACTTT------AAAAGGGGAA------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47039815 36 + 51301725 --------aaaaggcaaagcagtAGAAATTGT------AAAagggaag-----------tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752600 45 + 50890351 aaaaa-aaaaaaGGCAAAGGAGTAGAAATTGT------AAAAGGGAAC---------AGtt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330075 39 + 49145316 ----------AATTTAAATAAGACAAAATTTC------------TAATTTTTTTTGTTGTT i calJac3.chr22 C 0 T 9303 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e macFas5.chr19 54921233 905 + 59248254 I a score=10060.000000 s hg38.chr19_GL949748v2_alt 47839 32 + 1064304 ttgttgtttttgtttttgttttttgtttttt--g s panTro4.chr19 58981948 32 + 63644993 tttttgtttttgtttttgttttttgtttttt--g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615878 32 - 106955855 tgttagtttttgtttgtttgtttgtttgttt--g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903802 17 + 64156825 ----------------tttgttttgtttttttt- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47039851 24 + 51301725 tttttgttt-------tttgttttgtttttt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752645 30 + 50890351 tttttgttttt-tttgttttttttgtttttt--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e calJac3.chr22 45330114 9303 + 49145316 T e macFas5.chr19 54921233 905 + 59248254 I a score=265915.000000 s hg38.chr19_GL949748v2_alt 47871 151 + 1064304 tttttgagacagagtctcactctattgcccaggctggagtgcagtggcaagatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaagtagctgggtctacaggtgcatgccatcatacctggc s panTro4.chr19 58981980 151 + 63644993 tttttgagacagagtctcactctattgcccaggctggagtgcagtggcaagatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcacaagtagctgggtctacaggtgcatgccatcatacctggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615910 151 - 106955855 tttttcagacggagtctcactctatcgcccaggctggagtgcagtggcaagatcttggctcactgcaacttccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaagtagctgggtctacaggtgcatgccaccatatctggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903819 149 + 64156825 --tttgagacagagcgtcactttatcacccaggttggagtgcagtggcacgatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922138 151 + 59248254 tttttgagacagagcgtcactctatcacccaggttggagtgcagtggcacgatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i macFas5.chr19 I 905 C 0 s papAnu2.chr19 47039875 150 + 51301725 -tttggagacagagcgtcactctatcacccaggttggagtgcaatggcgcgatcttggctcactgcaaccttcgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752675 151 + 50890351 -ttttgagacagagcgtcactctatcacccaggttggagtgcagtggcgcgatcttggctcactgcaacctccgcctcccatgttcaagcaatttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e calJac3.chr22 45330114 9303 + 49145316 T a score=379650.000000 s hg38.chr19_GL949748v2_alt 48022 164 + 1064304 taattttttatttttagtagagacggggtttcactatgttggccaggctggtctcaaatccttgacctcagatgatccatccacctcggcctcccaaagtgctgggatgacaggcatgagccaccacgccaggccAGAAAGGGAAGA-TTTTGTTAAGAGCGATG s panTro4.chr19 58982131 164 + 63644993 taattttttatttttagtagagatggggtttcactatgttggccaggctggtctcaaatccttgacctcagatgatccatccacctcggcctcccaaagtgctgggatgacaggcatgagccaccacgccaggccAGAAAGGGAAGA-TTTTGTTAAGAGCGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55851906 164 + 60714840 taattttttatttttagtagagacggagtttcaccatggtggccaggctggtctcgaatccttgacctcagatgatctgcccacctcggcctcccaaagtgctgggatgacaggcatgagccactgcgcctggccGGAAAGGGAAGA-TTTTTTTAAGAGCGATG i ponAbe2.chr19 T 6164 C 0 s nomLeu3.chr10 102616061 164 - 106955855 taattttttatttttggtagagacggggtttcaccatgttggccaggctagtctcgaatccttgacctcagatgatccgcccacctcggcctcccaaagtgctgggatgacaggcatgagccactgtgcccggccAGAAAGGGAAGA-TTTTTTTATGAGCGATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903968 164 + 64156825 tgattttttatttttagtagagacggggtttcaccatgttggccaggctggtctcgaattcttgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgccgggccAGAAAGGGAAGA-TATTTTTAAGAGCGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922289 164 + 59248254 taattttttatttttagtagagacggggtttcaccatgttggccaggctggtctcgaattcttgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgccgggccAGAAAGGGAAGA-TTTTTTTAAGAGCGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040025 165 + 51301725 taattttttacttttagtagagacggggtttcaccatgttggccaggctggtctcgaattctcgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgcccggccacaaagggaagattttttttaagagcGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752826 164 + 50890351 taattttttatttttagtagagacagggtttcaccatgttggccaggctggtctggaattcttgacctcaggtgatctgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccacgctcggccAGAAAGGGAAGA-TTTTTTAAAGAGCGATG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45330114 9303 + 49145316 T a score=559368.000000 s hg38.chr19_GL949748v2_alt 48186 208 + 1064304 ATATTGTAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAACCATACACGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCTGTCACGTCCACC s panTro4.chr19 58982295 208 + 63644993 ATATTGCAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAACCATACACGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCCGTCACGTCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852070 208 + 60714840 ATATTGCAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAATCATACATGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCAGCTGTCACGTCCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102616225 208 - 106955855 ATATTGCGAGTCATGCAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAATCATACATGCCCTTACCTGTCACCAACATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCTGTCACGTCCTCC i nomLeu3.chr10 C 0 I 315 s rheMac3.chr19 59904132 208 + 64156825 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGCCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922453 208 + 59248254 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGCCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040190 208 + 51301725 ATATTGCGAGTAATGAGGAAATAAGATTCACAGAAGAACAAAACAACCTCTgattaaaaacaacacacacc-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTTGCCGGCTGTCACGTCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752990 208 + 50890351 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGTGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532159 212 - 122678785 atAATGGACATGATGGAGAAATGAGAATCAGAGACTAGCAGAACACTCTCTGAT--------ATATATACATTTTTTTCCTTATCATGCAAAACCTTACCTGTTACCAAGATTTCGGG-TGGTTATTGGGTG-GGAGGTCAAGAAAGGAGCCTTTATCTGGTGGTAGACAACTCTGCAGTTTCCAGAAACGATTTCCAAAATCGTTGACTGTCACATTTTGA i canFam3.chr1 I 1673 C 0 e calJac3.chr22 45330114 9303 + 49145316 T a score=5348.000000 s hg38.chr19_GL949748v2_alt 48394 2 + 1064304 AG s panTro4.chr19 58982503 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852278 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59904340 2 + 64156825 AG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922661 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040398 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753198 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532371 2 - 122678785 AG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45330114 9303 + 49145316 T e nomLeu3.chr10 102616433 315 - 106955855 I a score=1007578.000000 s hg38.chr19_GL949748v2_alt 48396 415 + 1064304 AGAGAAGTCTATCTCCTTCCCCGCTGGACTCTGCAGCTGGATGGGTGATGGCGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACAAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTCGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGTTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCGTGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTGTAAggcctggcatggtggctcacacctgtaatcccagcactttgggagg s panTro4.chr19 58982505 415 + 63644993 AGAGAAGTCTATCTCCTTCCCCGCTGGACTCTGCAGCTGGATGGGAGATGGCGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACAAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTCGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCGTGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggcctggcatggtggctcacacctgtaatcccagcactttgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852280 415 + 60714840 AGAGAAGTCTATCTCGTTCCCCGCTGGACTCCGCCGCTGGATGGGTGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCACAAACAATTGGTCTTGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCTGGAGGCTCTCACGGAGTGTGGGAAATGAGAGATTCCTGATATCTCCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggccgggcatggtggctcacacctgtaatcccagcactttgggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102616748 415 - 106955855 AGAGAAGTCTATCTCCTTCCCTTCTGGACTCCGCAGCTGGATGGGCGATGACGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACGAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGACTCTGAGGTCCTGGGGAGAAGTCTGGAATCTCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggccgggcatggtggctcacacctataatcccagcactttgggagg i nomLeu3.chr10 I 315 C 0 s rheMac3.chr19 59904342 405 + 64156825 GGAGAAGTCCGTCTCCTCCCCCGCTGGACTCCGCAGCTGGATGGCAGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTCTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATCAGAGACTTCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccgggcgtggtggctcacacctgtaatcccagca---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922663 405 + 59248254 GGAGAAGTCCGTCTCCTTCCCCGCTGGACTCCGCAGCTGGATGGCAGATGACGTACCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTCTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATCAGAGACTTCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccgggcgtggtggctcacacctgtaatcccagca---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040400 405 + 51301725 GGTGAAGTCCGTCTCCTTCCCCGCTGGACTCCTCAGCTGGATGGCAGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTTTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCACCCCTGTTCTCCTGGCCAGAGGCTCTCATGGAGTGTGGGAAATCAGAGATTCCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACGGAGATTCTCCCTCCTGCAAGACCTGtataaggccgggcgtggtggctcacacctgtaatcccagca---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753200 405 + 50890351 GAAGAAGTCCGTCTCCTTCCCCGCTGGACTCCGCAGCTGGATGGCAGATGATGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGCTGGTCCGGCTGCCAGCACTGCAGAGTCACCCTTCCACCTACGGTCACCGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCTGGAGGCTCTCATGGAGTGTGGGAAATCAGAGATTCCTGAACTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccggccgtagtggctcacacctgtaatcccagca---------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532373 308 - 122678785 AGAAAAGTCTGCCCGTTTTCCTTCAGGTCTATGGTGCTGTACATGCTTTCTAGTACTTGTCTTCAGGAGAACCAACATCACATGTTCAAGCA--TATTCTGGCCTGTGGCACTACAGAGTCACATTTCTTCCCTGGGTCACCTTA-----------GGCTTGGAGAGAAGGTTTGGGCAAACTTCCTGTAAGAGAAGATCACTTCCTG----CAAGGGAAG----------------ATTAATTCCTGT---------------------------------AAGGGAAGATT-----------------------ACTTCCTG---------TAAGGTAAGGTCACTACCTGTAACAA------TGTCAGAGGTAGCCTGGTTTCTCTCCTTC----CCTTGGCCTTCTGGGAGG i canFam3.chr1 C 0 I 3169 e calJac3.chr22 45330114 9303 + 49145316 T a score=405849.000000 s hg38.chr19_GL949748v2_alt 48811 189 + 1064304 ccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaggaggcggaagttgcagtgagccgaga s panTro4.chr19 58982920 189 + 63644993 ccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcaaaaccctgtctctactaaaaatacaaaaattagccgggcgtggtggcaggcgcctgtaatcccagctgctaaggaggctggagcaggagaatcacttgagcccaggaggcggaagtggcagtgagccgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852695 189 + 60714840 ccgaggtgggcagatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccctgtctctactaaaaatacaaaaattagctgggcgtggtggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaagaggcggaagttgcagtgagccgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617163 189 - 106955855 ccgaggtgggcggatcacctgaggtcaggagtttgacatcagcctgcccaacatggcaaaacgctgtctctactaaaaatacaaaaattagccgggcacgttggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaggaggcggaagttgcagtgagccgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59904747 171 + 64156825 ------------------ctgaggacgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggtggcagtgagtcaaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923068 171 + 59248254 ------------------ctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggttgcagtgagtcaaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040805 171 + 51301725 ------------------ctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggttgcagtgagtcaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753605 171 + 50890351 ------------------ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaagaattagccgggtgtggtggcacacacctgtaatcccagctactcaggaggctgaggcaggaaaatcagttgagcccaggaggcagaggttgcagtgagtcaaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19532681 3169 - 122678785 I e calJac3.chr22 45330114 9303 + 49145316 T a score=585205.000000 s hg38.chr19_GL949748v2_alt 49000 231 + 1064304 tggcaccactgcactctggcctgggcgacaaa----gTATAAAACCAACATATGCAATTTCGTTCCTG-TCTCTCTCCCTCTCCCATCACCCCCAACTACTCTGAAGGTGGGACCCCTTTTCTCCCTCTGTTCCTCCACTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGTACCTGTCACCAACAGTAGAAGGACGTCACTGCGCTGTGAAAGGAT s panTro4.chr19 58983109 231 + 63644993 tggcaccactgcactctggcctgggcgacaga----gTATAAAACCAAGATATGCAATTTTGTTCCTG-TCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTGGAGGTGGGACCCCTTTTCTCCCTCTGTTCCTTCACTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGTACCTGTCACCAACAGTAGAAGGACGTCACTGCGCTGTGAAAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852884 232 + 60714840 tggcaccactgcactctggccagggcgacaga----gTATAAAACCAAGATATGCAATTTCGTTCCTGTTCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTAGAGGTGGGACCCCTTTTCTTCCTCTGTTCCTCCTCTTCCTCCCTTATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGCACCTGTCACCAACAGTAGAAGGACGTCACTGTGCTGTGAAAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617352 231 - 106955855 tgacaccactgcactctggcctgggcgacaga----gTATAAAACCAAGATATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTGGAGGTGGGACCCCTTTTCTCCCCCTGTTCCTCCACTTCCTCCCTCATCCCCTGTCCCCCATATGTCATTGGTAGGCACCCTGTCTGCACCTGTCACCAACAGTAGAAGGGCGTCACTGTGCTGTGAAAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59904918 230 + 64156825 tggcaccactgcactccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCCACCCTGGAGGTGGGACCCCTTTTCTCCCTCTG-CCCTCTGCTTCCTCCCTCATCCCCTGCCCCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923239 230 + 59248254 tggcaccactgcactccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCTACCCTGGAGGTGGGACCCCTTTtctccctctg-ccctctgcttcctccctcatcccctgcccCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040976 230 + 51301725 tggcaccactgcactccggcctgggtgacaga----gtataaAACCAAGGTATGCAATTTCattcctg-tctctctccctctcccaccacccccagctaccctggaggtgggactccttttctccctctg-tccTCTGCTTCCTCCCTCATCCCCTGCCCCCCGCATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGCGAAGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753776 230 + 50890351 cggcaccactgctctccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCTACCCTGGAGGTGGGACTCCTTTTCTCCCTCTG-TCCTCTGCTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19535850 201 - 122678785 TGGTCTCACCCTCTTCTGACTCTGACTACAAGCCCTGGGTGAAGCCCAGCCAAGTCGTTCTGCTGCTG-TGTTTCTCCATCTCCCCTTGCCCCC--------------------------CCTCCCCGCCTCCCTGGGGTTCCTCCCCCA-CACCTGTCCC-----TGTTACTCCGAAGCACCC--TCCTCACCTGTCACCAGCAGGAGGAGGATGTCACTGGGCTGTGAACTTAT i canFam3.chr1 I 3169 C 0 e calJac3.chr22 45330114 9303 + 49145316 T a score=828846.000000 s hg38.chr19_GL949748v2_alt 49231 258 + 1064304 GTGGGGGGATGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTCGGCCGCGCCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA s panTro4.chr19 58983340 258 + 63644993 GTGGGGGGATGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTTGGCCGCACCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACATCGAAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853116 258 + 60714840 GTGGGGGGACGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTCGGCCGCGCCCTGTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCGACATTGCAGTGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617583 258 - 106955855 GTGGGGGGATGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTTGGCCGCGCCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACAACGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905148 258 + 64156825 GTGGGGGAACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTTGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTCGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923469 258 + 59248254 GTGGGGGAACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTCGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTCGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041206 258 + 51301725 GTGGGGGGACGCTTTTCTGTGGTATTCGCAGGTGTACTCGCCAGCATTTCTGATTTTTAGATTCTTGAGGTGAAATTCGGCCGGGCCCTCTGTTGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTGGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTCGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754006 258 + 50890351 GTGGGGGGACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTCGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTGGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTCGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320811 252 + 49145316 GTGGGAGACTGCTGTCTTGTAG---GCACAAAAGTACCTCCCAGCATCCTTGGGCTTCAAGTGCATGAAGGGGAATTCCGCTTCGCTTCCTGCCGAGCTCTG----TTCGCGCTGGAATGCAGAGTCGTTC--ACCTTGCGCAGCGTGAATGTCACATTCTGGGAAGGAGCCCGACACTTCAGGGTCACGTTGCTCTTGGCTTCAGCCACCGAGCTGGGCCAGGCGTGGAGGGAGGGCTTGGACAGTTTCTCTGGAAAGAA i calJac3.chr22 T 9303 I 9366 s canFam3.chr1 19536051 258 - 122678785 TTGTGGGAGCTCTCGTCTATAGTATTCGCAGGTGTATGGTCCAGCGTTACGGGTTTTTAGGTCATTGAGGTGAAATTCAGCCACGCCCTCTGTGGAAGCCAGTGATTGCA---AGGACTCTAAGATACTTCTTCCCTTTCTGAGAACAAAGTTGACGTTCTTGGTGGAAGTCTGGCATTGCAGTGTCACATTGCTCTTGGAAAGCATCATCCAGCTGGGCCAGGCACTGAGGGAGGGCTTGGGAAGGGTCTCTGGAAGGAA i canFam3.chr1 C 0 C 0 a score=130141.000000 s hg38.chr19_GL949748v2_alt 49489 53 + 1064304 GCAGAGCCTGATGCTGGACCCGATGC---CCTCCCCTGCTCTCAGGAAGCCCTTTT s panTro4.chr19 58983598 53 + 63644993 GCAGAGCCTGATGCTGGACCCGATGC---CCTCCCCTGCTCTCAGGAAGCCCTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853374 56 + 60714840 GCAGAGCCCGGTGCTGGACCCAACGCCCTCCTCCCCTGCTCTCAGGAAGCCCTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617841 52 - 106955855 ACAGAGCCTGGTGCTGGACCCAATGC---CCTCCCCTGCTCTCAGG-AGCCCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905406 53 + 64156825 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923727 53 + 59248254 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041464 53 + 51301725 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAaagccctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754264 53 + 50890351 GCAGAGCCCAGTCCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19536309 53 - 122678785 GCAGATTTGGGGATGGGATTTGGTGC---CCTGAGCTGCTCTCAAGAAGTCTCTTT i canFam3.chr1 C 0 I 1046 e calJac3.chr22 45321063 9366 + 49145316 I a score=33584.000000 s hg38.chr19_GL949748v2_alt 49542 20 + 1064304 TAAAAt-----------------------ttattattattatt s panTro4.chr19 58983651 26 + 63644993 TAAAAT-----------------ttattattattattattatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853430 17 + 60714840 TAAAAt--------------------------ttattattatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617893 43 - 106955855 TAAAATttattattatattattattattattattattattatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905459 20 + 64156825 TAAACT-----------------------ttattattattatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923780 20 + 59248254 TAAACT-----------------------ttattattattatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041517 20 + 51301725 taaaat-----------------------ttattattattatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754317 20 + 50890351 TAAAAT-----------------------ttattattattatt i chlSab2.chr6 C 0 I 32 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=627.000000 s hg38.chr19_GL949748v2_alt 49562 1 + 1064304 a s panTro4.chr19 58983677 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853447 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617936 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905479 1 + 64156825 a i rheMac3.chr19 C 0 I 19 s macFas5.chr19 54923800 1 + 59248254 a i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47041537 1 + 51301725 t i papAnu2.chr19 C 0 I 4 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I a score=6825.000000 s hg38.chr19_GL949748v2_alt 49563 5 + 1064304 ttatt s panTro4.chr19 58983678 5 + 63644993 ttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853448 5 + 60714840 ttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617937 5 - 106955855 ttatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54923802 5 + 59248254 ttatt i macFas5.chr19 I 1 I 13 s papAnu2.chr19 47041542 5 + 51301725 ttatt i papAnu2.chr19 I 4 I 10 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I e rheMac3.chr19 59905480 19 + 64156825 I a score=6780.000000 s hg38.chr19_GL949748v2_alt 49568 13 + 1064304 ttgagatggagtc s panTro4.chr19 58983683 13 + 63644993 atgagatggagtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853453 13 + 60714840 ttgagatggagtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617942 13 - 106955855 TTGAGATGGAGTC i nomLeu3.chr10 C 0 M 1546 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=65497.000000 s hg38.chr19_GL949748v2_alt 49581 253 + 1064304 tccctctgttgcccaggctagagtgcagtggtgcaatctcagttcactgcaacctccgtctcctgggttaaagcaattctcctgcctcagcctcccaagtaggtgggattacaggcacgcaccaccacacccagctaattttgtattttagtagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcgtga s panTro4.chr19 58983696 253 + 63644993 tccctctgttgcccaggctagagtgcagtggcgcaatcttagttcactgcaacctccgtctcctgggttaaagcaattctcctgcctcagcctcccaagtaggtgggattacaggcacgcaccaccacacccagctaattttgtattttagtagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgagattacaggcatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853466 253 + 60714840 tccctctgttgcccaggctagagtgcagggatgcaatctcagctcactgcaacctctgtctcccgggttaaagtgattctcctgccttagcctcccgagcagctgggattacaggcacgcaccaccacacctggctaattttgtattttcgtagagacaaatttccaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccactttggcctcccaaagtcctgggattataggcgtga i ponAbe2.chr19 C 0 I 5654 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=291.000000 s hg38.chr19_GL949748v2_alt 49834 3 + 1064304 acc s panTro4.chr19 58983949 3 + 63644993 acc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=9642.000000 s hg38.chr19_GL949748v2_alt 49837 12 + 1064304 cctgagcccAAT s panTro4.chr19 58983952 12 + 63644993 cctgagcccAAT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59905499 12 + 64156825 CCTGCGCCCAAC i rheMac3.chr19 I 19 C 0 s macFas5.chr19 54923820 12 + 59248254 CCTGCGCCCAAC i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47041557 12 + 51301725 cctgcGCCCAAC i papAnu2.chr19 I 10 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I a score=54171.000000 s hg38.chr19_GL949748v2_alt 49849 44 + 1064304 CAGGAATCCCATTTTAAGAAGGGAAGCGggctgggtgcggtggc s panTro4.chr19 58983964 44 + 63644993 CAGGAATCCCATTTTAAGAAGGGAAGGGggctgggtgcggtggc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59905511 44 + 64156825 CAGGAAGCCTATTTTAAGAAGGGAAACGggccaggcgcggtggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923832 44 + 59248254 CAGGAAGCCTATTTTAAgaagggaaacgggccaggcgcggtggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041569 44 + 51301725 CAGGAAGCCTATTTTACGAAGGGAaacgggccaggcgcggtggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754369 44 + 50890351 CAGGAAGCCTATTTTAAGAAGGGAAATGggccaggcgcggtggc i chlSab2.chr6 I 32 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M a score=112748.000000 s hg38.chr19_GL949748v2_alt 49893 65 + 1064304 tcacgcctgtaatcccagcaccttgggaggccaaggcaggcagatcacgaggtcatgagatcgag s panTro4.chr19 58984008 65 + 63644993 tcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtcatgagatcgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102619501 65 - 106955855 tcaccccggtaatcccagcactttgggaggccgaggcgggcaaatcatgaggtcatgagattgag i nomLeu3.chr10 M 1546 C 0 s rheMac3.chr19 59905555 65 + 64156825 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcggaagatcgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923876 65 + 59248254 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041613 65 + 51301725 tcacgcctgtcatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754413 65 + 50890351 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=478785.000000 s hg38.chr19_GL949748v2_alt 49958 219 + 1064304 accatcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcaagcacccgtagtcccagctacttgggaggctgagacaggagaatcacttgagcccaggaggcggaggttgctgtaagccgagattgcaccaccgcactccagcctggcgaaagagtgagactccgtc--------------aaaaaaaaaagagaaaaaGAGGG s panTro4.chr19 58984073 218 + 63644993 accatcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcatggtggtaagcacccgtagtcccagctacttgggaggctgagacaggagaatcacttgaacccaggaggcggaggttgctgtaagccgagattgcaccaccgcactccagcctggcgaaagagtgagactccgtc---------------aaaaaaaaagggaaaaaGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859373 233 + 60714840 accatcctggccaacatggtgaaactccgtctctaccaaaaatacaaaaattagctgggcattgtggcaagcacctgtagtcccagctactcgggaggctgagacaggagaatcacttgaacccaggaggcggagtttgctgtaagccgagattgcaccactgcactccagcctggtgaaagagtgagactctgtcaaaaagaaaaaaaaaaaaaagaaaaagaaaaaGAAGG i ponAbe2.chr19 I 5654 C 0 s nomLeu3.chr10 102619566 219 - 106955855 accattttggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcaagcacctgtcgtcccagctacttgggaggctgagacaggagaatcacctgaacccaggaggcggaggttgctataagccgagattgcaccaccgcactccagcctggcgaaagagtgagactctgtc--------------aaaaaaaaaaaaaaaatagaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905620 211 + 64156825 accatcctggccaacatggtgaaactctgtatctactacaaatacaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccgtc----------------------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923941 213 + 59248254 accatcctggccaacatggtgaaactctgtatctactacaaatacaaaaactagccgggcgtggtggc-ggcgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccgtc-------------------aaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041678 214 + 51301725 accatcctggccaacatggtgaaactccgtatctactacaaatacaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccatc-------------------aaaaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754478 217 + 50890351 accatcctggccaacatggtgaaactccgtatctactacaaatacaaaaattagccgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggtgaaagagtgagactccatc----------------aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=929069.000000 s hg38.chr19_GL949748v2_alt 50177 374 + 1064304 GGAAGGGGAAGAGAACAGCAGGGGATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCCGTGAGCCAGAAGCCCCTACCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAACAGACCCTTAGAGGTCATACGCTCAGGAGTTCTCATTCTCCCCACACTGGACTGTGGCTTCTGCTCGACTTCCAGCTCCTCCATCCTTTCCCAGCGATTCTCCTTGACCATCCTGTGTGGCTGTCACCTCCCCCTGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA s panTro4.chr19 58984291 374 + 63644993 GGAAGGGGAAGAGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCCGTGAGCCAGAAACCCCTACCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAACAGACTCTTAGAGGTCATACGCTCAGGAGTTCTCATTCTCCCCACACTGGACTGTGGCTTCCGCTCGACTTCCAGCTCCTCCATCCTTTCCCAGAGATTCTCCTTGACCATCCTGTGTGGCTGTCACCTCCCCCTGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859606 374 + 60714840 GGAAGGGGAAGGGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAGGAAACACTCACCATCTCCCTTTGGGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCTATGAACCAGAAGCCCCTGCCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAATAGACCCTTAGAGGTCATACTCTCAGGAGTTCTCATTCTCCCCACACTGGACTGCGGCTTCCGCTCGACTTCCAGCTCCTCCGTCCTTTCCCAGAGATTCTCCTTGACCATCCTGTGTGGCTCTCACCTCCCCCCGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102619785 354 - 106955855 agaaGGGGAAGGGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAGGAAACACTCACCATCTCCCCCTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCTGTGAGCCAGAAGCCCCTGCCTGGAGCCACATCGTCCCCTGCGCTGACCCCTGGAGACC-GTCCCAGAGTCTCCTGCTGAGAACAGACCCTTGGAGGTCATGCGCTCAGGAGTT--------------------CTGTGGCTTCCGCTCGACTCCCAGCTCCTCCGTCCTTTCCCAGAGATTCTCTTTGACCGTCCTGTGTGGCTCTCACCTCCCCCGGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905831 389 + 64156825 agaaGGGGAAGGGAACGGGAGGCAATTTGGGACGACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAATCCTGAAAGGCAATCCTCTGTGAGACAGAAGCCCCTGCCTGGAGCCACATCA-CCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTTCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGAGTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54924154 389 + 59248254 agaaggggaagggaacgggagggaaTTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAATCCTGAAAGGCAATCCTCTGTGAGACAGAAGCCCCTGCCTGGAGCCACATCA-CCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041892 390 + 51301725 agaaggggaagggaacGGGAGGGAATTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAGTCCTGAAAGACAATCCTCCGTGAGACAGAAGCCCCTGCCTGGAGCCACATCACCCCCTACCCTGGCCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATG-ATCCACATATCCTTCTATTCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754695 390 + 50890351 agaaGAGGAAGGGAACGGGAGGGAATTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAGTCCTGAAAGACAATCCTCCGTGAGACAGAAGCCCCTGCCTGGAGCCACATCACCCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGTGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGTGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103185125 361 + 122678785 GGAAAGAGAAGGGACATG--GGGAGTTTGGAGTGA-AGGAGAGAGAGGGTCTAAATGAAGGA--ACTCACCATCAGTCATCCAGCTACTTTGGCCAACACACAGCCCTGTGAGAGAACTGTCCATGAGACACGAGCACCCGGCTGGAGGCCCGT-----CCCGAGGGGTCTCCTGGG---------CGGGGGCTGCTGCTGAGAACGGACCC-TGGAGATCATGCAACT--GGGTTCTCACT-TCCCCTCACTGGACTGTGGCTGCAGCTGTGCTCTCAGCTCCTGCCCCATTTCTCCAGGAAGGTC--------TCCTGTGTGGCTCTCACCTCACGTGGCCCCAGGACTGGTCCTGGTTCCACAGATGTTCACAAACCCTGTAATTCTTA i canFam3.chr1 I 1686 n 1046 e calJac3.chr22 45321063 9366 + 49145316 I a score=86147.000000 s hg38.chr19_GL949748v2_alt 50551 36 + 1064304 TCTTCTGTTTGAAAACAGCACTCATTCTTACCAttt s panTro4.chr19 58984665 36 + 63644993 TCTTCTGTTTCAAAACAGCACTCATTCTTACCAttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859980 36 + 60714840 CCTTCTGTTTCAAAACAGCACTCATTCTTACCAttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620139 36 - 106955855 TCTTCTGTTTCAAAACGGCACTCATTCTTACCAttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59906220 36 + 64156825 TCTTCTGTTTCAATACGGCACTCATTCTTACCAttt i rheMac3.chr19 C 0 I 18 s macFas5.chr19 54924543 36 + 59248254 TCTTCTGTTTCAATACGGCACTCATTCTTACCATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042282 36 + 51301725 TCTTCTGTTTCAGTACGGCACTCATTCTTACCATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755085 36 + 50890351 TCTTCTGTTTCAATACAGCACTCATTCTTACCAttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=20721.000000 s hg38.chr19_GL949748v2_alt 50587 16 + 1064304 ctttctttctttcttt s panTro4.chr19 58984701 16 + 63644993 ccttctttctttcttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55860016 14 + 60714840 ctttctttctttct-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620175 16 - 106955855 ctttctttcttttttt i nomLeu3.chr10 C 0 I 608 s macFas5.chr19 54924579 16 + 59248254 CTTACTTACtttcttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042318 16 + 51301725 cttacttactttcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755121 16 + 50890351 cttactttcttttttt i chlSab2.chr6 C 0 I 8 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59906256 18 + 64156825 I a score=4460.000000 s hg38.chr19_GL949748v2_alt 50603 8 + 1064304 ttctttcc s panTro4.chr19 58984719 8 + 63644993 ttctttcc i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55860030 8 + 60714840 tccttcct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924595 8 + 59248254 tttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042334 8 + 51301725 ttttttcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e rheMac3.chr19 59906256 18 + 64156825 I a score=906.000000 s hg38.chr19_GL949748v2_alt 50611 3 + 1064304 ttt s panTro4.chr19 58984727 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860038 3 + 60714840 tct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924603 3 + 59248254 ttc i macFas5.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e papAnu2.chr19 47042342 0 + 51301725 C e rheMac3.chr19 59906256 18 + 64156825 I a score=2402.000000 s hg38.chr19_GL949748v2_alt 50614 143 + 1064304 ctttctttct-tttttctttctttcattcattctttctttcattcattccagagacagagtctcgctctttctttctttttctttctttctttctttcattcattctttctttctttcattcattctttctttctttcattcat s panTro4.chr19 58984730 51 + 63644993 ctttctttctctctctctttctttcattcattctttctttcattcatt---------------------------------------------------------------------------------------------cat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860041 83 + 60714840 ttctctctctctctccctttctttc-------------ttccttcctt------------------------------------------------ccttcctttctttctctctctctttctttcttcctttctttcttttat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e papAnu2.chr19 47042342 0 + 51301725 C e macFas5.chr19 54924606 0 + 59248254 C e rheMac3.chr19 59906256 18 + 64156825 I a score=180.000000 s hg38.chr19_GL949748v2_alt 50757 1 + 1064304 t s panTro4.chr19 58984781 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860124 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47042342 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e macFas5.chr19 54924606 0 + 59248254 C e rheMac3.chr19 59906256 18 + 64156825 I a score=1531.000000 s hg38.chr19_GL949748v2_alt 50758 3 + 1064304 cca s panTro4.chr19 58984782 3 + 63644993 cCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860125 3 + 60714840 cca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924606 3 + 59248254 ccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042343 3 + 51301725 cct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e rheMac3.chr19 59906256 18 + 64156825 I a score=269629.000000 s hg38.chr19_GL949748v2_alt 50761 150 + 1064304 gagacagagttgcgctctgtcgcccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggatcacaggcatgcgccaggacgcccggctgag s panTro4.chr19 58984785 150 + 63644993 gagacagactctcgctctgtcgcccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagccttgcaaatagctgggattacaggcatgcgccaggacgcccggctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860128 150 + 60714840 gagacagagtctcgctctgtcgcccaggctggagtagagtgatgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggattacgggcatgcaccaggatgcccggctgag i ponAbe2.chr19 C 0 T 5767 s rheMac3.chr19 59906274 150 + 64156825 gagatagagtctcgctctgttgtccaggctggagtagagtgacgcaatctcagctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgtgtcaccacacccggctgag i rheMac3.chr19 I 18 C 0 s macFas5.chr19 54924609 150 + 59248254 gagatagagtctcactctgttgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcttcccaaacagctgggatcacaggcatgtgtcaccacacccggctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042346 150 + 51301725 gaggtagagtctcgctctgtcgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgtgtcaccacgcccggctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755145 150 + 50890351 gagatagagtctcgctctgttgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccagttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgcgtcaccacacccggctgag i chlSab2.chr6 I 8 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=665006.000000 s hg38.chr19_GL949748v2_alt 50911 361 + 1064304 ttttgtattattagtagagacagggtttcaccatattgg-ccaggctggtctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgccgggattacaggcatgagctttgtgcccag---c----------TTCTTTTTAttttttaatttttcattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcccaggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaattttttagtctttcccagagacagagtctccctatgttgcccaggct s panTro4.chr19 58984935 361 + 63644993 ttttgtatttttagtagagacagggtttcaccatattgg-ccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgccgggattacaggcatgagctttgtgcccag---c----------TTCTTTTTAttttttaatttttcattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcccaggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaattttttagtctttcgcagagacagagtctccctatgttgcccaggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55854511 364 + 60714840 ttttgtattattagtagagacagggtttcaccatgttgg-ccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgccgggattacaggcatgagctttgcgcctggccTC----------TTCTTTTTAttttttattttttaattttattattgtgttttgagacagggtctctctcttttgcccaggttggagtgcagtggctccatcatggctcaatgtagcctcccgggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaatattttagtcttttgcagagacagagtctccctatgttgcccaggct i ponAbe2.chr19 T 5767 C 0 s rheMac3.chr19 59906424 365 + 64156825 ttttgtgttattagtagagatggggtttcaccatgttagcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggactacaggcatgagccttgcacctggccTC----------TTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtacagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54924759 365 + 59248254 ttttgtgttattagtagagatggggtttcaccatgttagcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggactacaggcatgagccttgcacctggccTC----------TTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtacagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042496 365 + 51301725 ttttgtgttattagtagagacagggtttcaccatgttggcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgccgggactacaggcatgagccttgcacctggcctc----------ttctttttattttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcaccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755295 374 + 50890351 ttttgtgttattagtagagatggggtttcaccatgttgg-ccagactggtctcaaactcctgacctcaggtgatccacccacctcagcctcccaaagtgccgggactacaggcatgagccttgcacccggccTCTTCTTTTTATTTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcttcccaggctcaagtgatcctcccacctcagcctcctgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=86062.000000 s hg38.chr19_GL949748v2_alt 51272 38 + 1064304 CATGATCTCTTTTAATCCCTTCATGACTCCAAACAGGA s panTro4.chr19 58985296 38 + 63644993 CATGATCTCTTTTAATCCCTTCATGACTCCAAACAGGA i panTro4.chr19 C 0 I 25 s ponAbe2.chr19 55854875 38 + 60714840 CATGATCTCTTTTAATCCCTTAATGACTCCAAACAGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906789 38 + 64156825 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925124 38 + 59248254 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042861 38 + 51301725 catgaTCTCTTTTCATCCCTTCATGACTCCAAACAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755669 38 + 50890351 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537408 36 - 122678785 CATGATCTCTTTTCATCCCTGGAT-ACTCC-AACAGGA i canFam3.chr1 I 1046 C 0 e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=169506.000000 s hg38.chr19_GL949748v2_alt 51310 108 + 1064304 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCCTCAAAACATCCAAATGGTCATTCCAGAAAGGGGAAAGCATA-CGTTCCTCCCTGTTTCACACATGGCTGCATTTGC s ponAbe2.chr19 55854913 108 + 60714840 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCCTCAAAACATCCAAATGGTCTTTCCAGAAAGGGGAAAGCATA-CATTCCTCCCTGTTCCACACACAGCTGCATTTGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906827 108 + 64156825 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATG-CATTCATCCCTGTTCCACACACAGCTGCCTTTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925162 108 + 59248254 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATG-CATTCATCCCTGTTCCACACACAGCTGCCTTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042899 108 + 51301725 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATA-CGTTCATCCCTGTTCCACACACAGCTGCGtttat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755707 108 + 50890351 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGGGAAGAAAGCATA-CATTCATCCCTGTTCCACACACAGCTGCGtttat i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537444 109 - 122678785 CAGAGTTTACCACTTGGTCCTCTGAAACAAGCCTCAAAGAATCCACATGGATATTCCAGAAAGGAGAAAACATACCATCCTTCCTTGCCCCCCTCACAGGTGCATCTGT i canFam3.chr1 C 0 I 344 e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=104656.000000 s hg38.chr19_GL949748v2_alt 51418 84 + 1064304 TCTTCCTCCTTTTTAA------TTTTTTTTG--ATAGAGACAGGGCTGGGCTGGTTAAGAACTCTTGACCATgccgggcgcggtggctcccg s ponAbe2.chr19 55855021 87 + 60714840 TCTTCTTCCTTTTTAA---TTTTTTTTTTTG--ATAGAAACAGGGCCGGGTTGGTTAAGAACTCTTGACCATgctgggcgtggtggctcacg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906935 88 + 64156825 TCTTCTTCCTTTGTAA--TTTTTTTTTTTTT--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcggtggctcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925270 90 + 59248254 TCTTCTTCCTTTGTAATTTTTTTTTTTTTTT--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcggtggctcacg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47043007 92 + 51301725 tcttcttcctttttaattttttttttttttttaatagagacagggccaGGCTGGTTAAGAACTCTTGAccatgccaggcgcggtggctcacg i papAnu2.chr19 C 0 I 1439 s chlSab2.chr6 46755815 90 + 50890351 tcttcttcctttttaattttttttttttttt--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcagtggctcacg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=5865.000000 s hg38.chr19_GL949748v2_alt 51502 4 + 1064304 cctg s ponAbe2.chr19 55855108 4 + 60714840 cctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59907023 4 + 64156825 cctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925360 4 + 59248254 cctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044538 4 + 51301725 cctg i papAnu2.chr19 I 1439 C 0 s chlSab2.chr6 46755905 4 + 50890351 cctg i chlSab2.chr6 C 0 I 841 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=19920.000000 s hg38.chr19_GL949748v2_alt 51506 14 + 1064304 taatcccagcactt s ponAbe2.chr19 55855112 14 + 60714840 taatcccagcactt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59907027 14 + 64156825 taatcccagcactt i rheMac3.chr19 C 0 I 1595 s macFas5.chr19 54925364 14 + 59248254 taatcccagcactt i macFas5.chr19 C 0 I 2559 s papAnu2.chr19 47044542 14 + 51301725 taatcccagcactt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756750 14 + 50890351 taatcccagcactt i chlSab2.chr6 I 841 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=88532.000000 s hg38.chr19_GL949748v2_alt 51520 68 + 1064304 tgggaggccgaggcaggtggatcacgaggtcaggagttgaagaccagcctggccaacatggtgaaacc s ponAbe2.chr19 55855126 68 + 60714840 tcggaggccgaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59908636 68 + 64156825 tgggaggccgaggcaggtggatcacaaggtcaggaattcaagacaagcctggccaacagggtgaaacc i rheMac3.chr19 I 1595 C 0 s macFas5.chr19 54927937 68 + 59248254 tgggaggccgaggcaggtggatcacaaggtcaggaattcaagacaagcctggccaacagggtgaaacc i macFas5.chr19 I 2559 C 0 s papAnu2.chr19 47044556 68 + 51301725 tgggaggccgaggcaggtggatcacgagatcaggagctcaagaccagcctggccaacatggtgaaacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756764 68 + 50890351 tgggaggccgaggcaggtggatcacgaggtcaggagttcaagacaagcctggccaacatggtgaaacc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=30937.000000 s hg38.chr19_GL949748v2_alt 51588 17 + 1064304 ccgtctatactaaaaat s ponAbe2.chr19 55855194 17 + 60714840 ctgtctctactaaaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620799 17 - 106955855 ccgtctctactaaaaat i nomLeu3.chr10 I 608 C 0 s rheMac3.chr19 59908704 17 + 64156825 ctgtctctactaaaaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928005 17 + 59248254 ctgtctctactaaaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044624 17 + 51301725 ctgtctctactaaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756832 17 + 50890351 ctgtctctactaaaaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e panTro4.chr19 58985334 25 + 63644993 I a score=351569.000000 s hg38.chr19_GL949748v2_alt 51605 174 + 1064304 acaaaaattagcca-ggtgtggtgatgggcgcctgtgatcccagctactcaggaggctgaggcagagaatcgcttgaacccaggaggcagagtttgcaatgagctgagatcgcaccactgcactccagcctggccacagcgcgagactcagtttcaggaaagaaaaaaaaa----agag s panTro4.chr19 58985359 173 + 63644993 acaaaaattagcca-ggcgtggtgatggccgcctgtgatcccagctactgaggaggctgaggcagagaatcacttgaacccaggaggcagaggttgcaatgagctgagatcgcgccactgcactccagcctggccacagtgcgagactcagtttcaggaaagaaaaaaaaa-----gag i panTro4.chr19 I 25 C 0 s ponAbe2.chr19 55855211 176 + 60714840 acaaaaattagcca-ggcgtggtgatgggcgcctgtaatcccagctactcaggagcctgaggcagagaatcgcttgaacccaggaggcagaggttgcaatgagctgagatagcaccactgcactccatcctggcgacagcacgagactcagtctcaggaaagaaaaaaaaa-aa-agag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620816 178 - 106955855 acaaatattagccagggagtggtgatgagcgcctgtaatcccagctactcgggaggctgaggcagagaatcgcttgaacccaggaggcggaggttgcaatgagctgagatcgcgccactgcactccagcctggcgacagcacaagactcggtctcaggaaagaataaaaaa-aagagag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59908721 169 + 64156825 acgaaaattggcca-ggcgtggtgccgggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctgtcaacacagcgagactcattctcagaaag-aaaaaaaaa-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928022 170 + 59248254 acgaaaattagcca-ggtgtggtgccgggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacacagcgagactcagtctcagaaagaaaaaaaaaa-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044641 170 + 51301725 acgaaaattagcca-ggtgtggtgacgggcgcctgtcattccagctactcgggaggctaaagcagagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacaaagcgagactcagtctcagaaagaaaaaaaaag-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756849 178 + 50890351 acgaaaattagcca-ggtgtggtgactggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacccgagaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacagagcgagactcagtctcagaaagaaaaaaaaaaaaagaaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=644422.000000 s hg38.chr19_GL949748v2_alt 51779 243 + 1064304 aaagaaaaGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTGT-----GAACAGTTTTAGGTCTCAGCAG-GAAAAA-GGAGAAGTTACCAGGCGTTTGTGCTACTATTACATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac s panTro4.chr19 58985532 243 + 63644993 aaagaaaagaaAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTATCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTGT-----AAACAGTTTTAGGTCTCAGCAG-GAAAAA-GGGGAAGTTACCAGGCGTTTGTCCTACTATTACATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855387 239 + 60714840 aaagaaaaGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGC----CCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGCAG-GAAAAA-GGGGAAGTTACCAGGCGTTTGTGCTAGTATTGCATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620994 243 - 106955855 aaagaaaAGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAGTGAGATTGATCTAACCCAAAGAAAGTTAGTTAGGCCAGTGTGTCTGACAGA----TTGCCTCTTTTCCC------CCTGTAT-----GAACAGTTTTATGTGTCAGCAG-GAAAAA-AGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59908890 244 + 64156825 aaagaagagaaaaaaCATAATATCAAGCCTGTTTATGGACATTATCATAATAATGGCATTGCTCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGTAG-GAAGAAGGGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928192 243 + 59248254 aaagaagagaaaaaACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGCTCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGTAG-GAAGAA-GGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044811 243 + 51301725 aaagaagagaaaaaacataatATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAgaga----tttcctctttttcc------cctGTAT-----GAACAGTTTTATGTTTCAGTAG-GAAGGA-GGGGAAGTTACCAGGCATTTGTGCTACTATTGCATCCACGAGCCAGTGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAACTGTGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757027 243 + 50890351 aaagaagagaaaaaacatAATATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAG-----GAACCGTTTTATGTCTCAGTAG-GAAGAA-GGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATAAGCCAGTGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGaac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537897 254 - 122678785 TAAGATCTCTTTAAAAATAACATCAAGCCTGCTTACAGAATTTATTGGAAGAGAGAGATTGTTCTAACTCAGCAGATACTGGTTGGACCTGTGTTTCTAAGAGATTTGTTTACTCTTTTTCCTTTTTGCCTATGTTAATGGAACAGTTTTGTGTCTTAGTAGTGAAGAG-GGAAAAGTTACCAGGCCTTTGTGCTAAAAT----TCCATGGG-CACTCCAAAATATTACGTTGCACGGTTTGCAAAAGGCAAGTGATAac i canFam3.chr1 I 344 I 2530 e calJac3.chr22 45321063 9366 + 49145316 I a score=152889.000000 s hg38.chr19_GL949748v2_alt 52022 73 + 1064304 acccaaaatgttcaaacaacgtaagtgtccatccatggaagaatggataaacacagtgtgctctatatattca s panTro4.chr19 58985775 73 + 63644993 acccaaaatgttcaaacaacgtaagtgtccatccgtggaagaatggataaacacagtgtgctctatatattca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855626 73 + 60714840 acccgaaaggttcaaacaacgtaagtgtccatccatggaagaatgcataaacacagtgtgctctatacattca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102621237 73 - 106955855 acccgaaaggttcaaacaacataagtgtccatccatggaaaaatggataagcacagtgtgctctatacattca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59909134 70 + 64156825 GCTCAAAAGGTTCAAACA---TAAGTGTCCATCCATGGCATGATGGACAAACACAGTGTGCTCCATATATTCA i rheMac3.chr19 C 0 I 3434 s macFas5.chr19 54928435 70 + 59248254 actcaaaaggttcaaaca---taagtgtccatccatggcatgatggataaacatagtgtgctccatatattca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045054 70 + 51301725 ACCCAAAAGGTTCAAACA---TAAGTGTCCATccatggaagaatggataaacataGTGTGCTCCATATAttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757270 70 + 50890351 acccaaaaggttcaaaca---taagtgtccatctatggcagaatggataaacatagtgtactccatatattca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=30061.000000 s hg38.chr19_GL949748v2_alt 52095 22 + 1064304 atgggattttTCTTCtttttct s panTro4.chr19 58985848 22 + 63644993 atgggattttTCTTCtttttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855699 22 + 60714840 atgggatttttttTCtttttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102621310 22 - 106955855 atgggatttttttTCTTTTTCT i nomLeu3.chr10 C 0 I 47 s macFas5.chr19 54928505 15 + 59248254 acgggattttttctt------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045124 22 + 51301725 atgagatttttttttcttttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757340 22 + 50890351 atgggattttttttctttttct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=45251.000000 s hg38.chr19_GL949748v2_alt 52117 46 + 1064304 tc-gttt-tttttttttttttttttgagacatagtttcattcttgttg s panTro4.chr19 58985870 46 + 63644993 tc-gttt-tttttttttttttttttgagacatagtttcattcttgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855721 47 + 60714840 tcggttt-tgttttcttttttttttgagacatagtttcattcttgttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54928520 40 + 59248254 --------ttcttttttttttttctgagacagagtttcgctcttgttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045146 44 + 51301725 ---tttc-tttttttttttttttctgagacagagtttcgctcttgttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757362 45 + 50890351 ---tttcttttttttttttttttctgagacagagtttcgctcttgttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621332 47 - 106955855 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=186645.000000 s hg38.chr19_GL949748v2_alt 52163 103 + 1064304 cccaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag s panTro4.chr19 58985916 103 + 63644993 cccaggctggagtgcaatggcgcgatctcggctcactgcaatctctgcctcacgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855768 103 + 60714840 cccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcatggattcaagtgattcttgtgcctcagcctcccaagtagctgggattacag i ponAbe2.chr19 C 0 I 7657 s nomLeu3.chr10 102621379 103 - 106955855 cccaggctggagtgcagtggcgcggtcttagctcaccacaacctctgcctcacgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag i nomLeu3.chr10 I 47 I 89 s macFas5.chr19 54928560 103 + 59248254 tccaggctggagtgcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045190 103 + 51301725 tccaggctggagggcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757407 103 + 50890351 tccaggctggagtgcaatggcgcgatcttggctcactgcaacctccacctcgcgggttcaagtgattctcctgcctcagcctcctaagtagctgggattacag i chlSab2.chr6 C 0 I 3292 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2980.000000 s hg38.chr19_GL949748v2_alt 52266 18 + 1064304 ctcac-tgcaacctccgcc s panTro4.chr19 58986019 18 + 63644993 ctcac-tgcaacctctgcc i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928663 18 + 59248254 -gcatgcgccaacacagcc i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47045293 18 + 51301725 -gcatgtgccaacacagcc i papAnu2.chr19 C 0 I 83 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2969.000000 s hg38.chr19_GL949748v2_alt 52284 37 + 1064304 ttgcaggttcaagtgattctcct---------------------------gcctcagcctcccA s panTro4.chr19 58986037 37 + 63644993 tcgcaggttcaagtgattctcct---------------------------gcctcagcctcccA i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928689 64 + 59248254 ttgtgggtttttttgttttttttgtttttttgttttttttttgagacagagtcttgctctctca i macFas5.chr19 I 8 I 15 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045311 83 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=14017.000000 s hg38.chr19_GL949748v2_alt 52321 43 + 1064304 agtagctgggattacagctcactgcaa---cctccgccttgtgggt s panTro4.chr19 58986074 43 + 63644993 agtagctgggattacagctcactgcaa---cctccgccttgtgggt i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928768 45 + 59248254 agtggc-atgatctccactcactgcaaactccaccgccttctgggt i macFas5.chr19 I 15 C 0 s papAnu2.chr19 47045394 45 + 51301725 agtggc-gtgatctccactcactgcaaactccaccgcctcccgggt i papAnu2.chr19 I 83 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=71112.000000 s hg38.chr19_GL949748v2_alt 52364 170 + 1064304 tcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccagctaattttgt----attttttagtagagacagggtttcaccatgttggtcaggctgg------------------------------tcttgaactcccc-acctcaggtgatccgcccatcttagcct-ccaaaat---------------------------------gct s panTro4.chr19 58986117 170 + 63644993 tcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccagctaattttgt----attttttagtagagacagggtttcaccatgttggtcaggctgg------------------------------tcttgaactcccc-acctcaggtgatccgcccaccttagccc-ccaaagt---------------------------------gct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621571 221 - 106955855 tcaggtgatccgcccacctcagcctcccaaagtgct-------------TTTTTCTTTTTCTTTTCTTCCtttttt----tttttttttttgagacagggtctcactctgctgcccaggctggagtgcaatgatgtgatcctagttcactccagcatcaacgccccgggctcaagtgatcctcccacctctgcct-cccgagtagctggcactacaggtgcacaccaccatgcccagcT i nomLeu3.chr10 I 89 C 0 s macFas5.chr19 54928813 173 + 59248254 tcacaccattctcctgccccagcctccctagaaactgggactacaggcgcccaccaccacacctggctaatttttttgtgtgtttttagtagacacggggtttcaccgtttttgccaggatgg------------------------------tctcgatctcctg-acctc--gtgatccacccgccttggcctcccaaagt---------------------------------gct i macFas5.chr19 C 0 I 31 s papAnu2.chr19 47045439 173 + 51301725 tcacgccattctcctgcctcagcctccctagaaactgggactacaggcgcccaccaccacacctggctaatttttgtgggtgtttttagtagagacggggtttcaccgtttttgccaggatgg------------------------------tctcgatctcctg-acctc--gtgatccgcccaccttggcctcccgaagt---------------------------------gct i papAnu2.chr19 C 0 I 31 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2512.000000 s hg38.chr19_GL949748v2_alt 52534 26 + 1064304 tttttctttttcttttctttctttct s panTro4.chr19 58986287 25 + 63644993 TTTTTCTTTTTCTTTTCtttctttc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621792 25 - 106955855 CATTGTTTTTTGTTGTTGttgtttt- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045612 31 + 51301725 I e macFas5.chr19 54928986 31 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=25587.000000 s hg38.chr19_GL949748v2_alt 52560 53 + 1064304 tttttttttttttttttttttgaggcagggtctcgctc-tgctgcccaggctgg s panTro4.chr19 58986312 52 + 63644993 -ttttttttttttttttttttgaggcagggtctcgctc-tgctgcccaggctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621817 54 - 106955855 taatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54929017 53 + 59248254 ctaattttgtattttttagtagagacagggtttcacca-tgttggtcaggctgg i macFas5.chr19 I 31 I 5 s papAnu2.chr19 47045643 53 + 51301725 ctaattttatattttttagtagagacagggtttcacca-tgttggtcaggctgg i papAnu2.chr19 I 31 I 5 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=5943.000000 s hg38.chr19_GL949748v2_alt 52613 35 + 1064304 agtgcaatgatgtgatcctagttcattccagcatc s panTro4.chr19 58986364 35 + 63644993 agtgcaatgatgtgatcctagttcactccagcatc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621871 35 - 106955855 agtgcaatggcacaatctccgctcactgcaacccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045696 5 + 51301725 I e macFas5.chr19 54929070 5 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=68009.000000 s hg38.chr19_GL949748v2_alt 52648 158 + 1064304 aactccctgggctcaggtgatcctcccacctctgcctcccgagtagctgggactacagctgcacaccaccatgcccagctcatttttgttgttgttgttgtttttaatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg s panTro4.chr19 58986399 158 + 63644993 aactccctgggctcaggtgatcctcccacctctgcctcccgagtagctgggattacagctgcacaccaccatgcccagctcatttttgttgttgttgttgtttttaatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621906 131 - 106955855 tgcctcccgggttcaagcgattctcctgcctcagcctcccaagtacctgggattacaggcacctgccaccacgcctggctaattttta----------tatttttaata----------------gaaatggggtttcac-cctattggccaaactgg i nomLeu3.chr10 C 0 I 1486 s macFas5.chr19 54929075 148 + 59248254 aactcccc-acctcaggtgatcagcccacctcggcctcccaaagtgctgggattacagctgtgagccaccgcgcctggccTTTTCTT-------tttttcttttctttctttcttttta-tttttgagacagggtttcac-tctgctgcccaggctgg i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47045701 149 + 51301725 aactcccc-acctcaggtgatcagcccacctcagcctcccaaagtgctgggattacagctgtaagccaccgcacccggccttttttc-------tttttcttttctttctttctttttattttttgagacagggtctcac-tctgctgcccaggctgg i papAnu2.chr19 I 5 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=63814.000000 s hg38.chr19_GL949748v2_alt 52806 164 + 1064304 agtgcaatggcatgatctcggctcactgcaacctctgactcctgggttcaagcgattctcttgcctcagcctcccaagtagctgggattacaggcgcccgccaccacgcatggctaatttt--------tatatttttag------------tagaaatggggtttcac-cctattggccaggct s panTro4.chr19 58986557 164 + 63644993 agtgcaatggcatgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcgcccgccaccacgcatggctaatttt--------tatatttttag------------tagagatggggtttcac-cctattggccaggct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54929223 185 + 59248254 agtgcaatgatgtgatcctagttcactccagcctcaactccctgggctcaagtgatccttccacctcggcctcctgattagctgggacgacaggtgcacaccaccatgcccagctcatttttttgtttgtttgtttttaatatttatttatttagagatggagtttcgctcttgttgcccaggct i macFas5.chr19 C 0 I 82 s papAnu2.chr19 47045850 185 + 51301725 agtgcaatgatgtgatcctagttcactccagcctcaactccctgggctcaagtgatccttccacctcagcctcccaattagctgggacgacaggtgcacaccaccatgcccagctcatttttttgtttgtttgtttttaatatttatttatttagagatggagtttcgctcttgttgcccaggct i papAnu2.chr19 C 0 I 82 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=3693.000000 s hg38.chr19_GL949748v2_alt 52970 39 + 1064304 gttctcgaactccttacgtcaggtcattgcaaaaaaagt s panTro4.chr19 58986721 39 + 63644993 gttctcgaactccttacgtcaggtcattgcaaaaaaagt i panTro4.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046035 82 + 51301725 I e macFas5.chr19 54929408 82 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=55411.000000 s hg38.chr19_GL949748v2_alt 53009 172 + 1064304 gctgggattacaggcgtgagccaccatgcccagcctcatttttgta-ttttttgtagagacagggtttcaccatgttgcccaggctagtctcgaactcctgggctcaagcgatctgcctgcctcagactctcaaagtgctgggattacaggtgtgagacactgtgctcggcct s panTro4.chr19 58986760 172 + 63644993 ggtgggattacaggcgtgagccaccatgcccagcctcattttttaa-ttttttgtagagacagggtttcaccatgttgcccaggctagtctcgaactcctgggctcaagcgatctgcctgcctcagactctcaaagtgctgggattacaggtgtgagacattgtgctcggGCt i panTro4.chr19 C 0 C 0 s macFas5.chr19 54929490 152 + 59248254 gctgggattacaggcgcccgccaccacgcctgg-ctaatttttgta-tttttagtagagatggggtttcacccta-----caggctggtctcaaactccttacatcaggtcat-----tgc---------aaaaagtgctgggattacaggcgtgagtcaccgtgcccagtct i macFas5.chr19 I 82 I 1977 s papAnu2.chr19 47046117 154 + 51301725 gctgggattacaggcacccgcctccacgcctgg-ctaatttttgtattttttagtagagatggggtttcacccta-----cagactggtctcaaactccttacatCAGGTCAT-----Tgc--------aaaaaagtgctgggattacaggcgtgagtcaccgtgcccagtct i papAnu2.chr19 I 82 I 2062 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=56751.000000 s hg38.chr19_GL949748v2_alt 53181 632 + 1064304 acagtgggattttagccataaaaaggaaaggaaatctgacatatcctacaatatagatgtagctcgaggatattatgctgagtaaactaagtcaggcaaaaaagaacaagtgttatgattccactcatacatcctagaataagcaaattcatagagataaaaattagaatgggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacaaagtcaggagatcgagaccagcctggtcaacatggtgaaaccttgtctctactaaaaaaaaaaaaaaaaaaaacttagccaggcatggtggtgagcgccagtgatcccagctactcgggagggagaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagattaggccactgtactccagcctgggtgacgaagcaagactccatctccgaaaaaaaaaaaaaaaaaaagaaattagaatggaggttaccaggggctgggaggaccgcggcaaatacagagttattggttagagggtgtagcgttcatattgggaattgtgattgttaatttgatttatcagctagaccaggccacaggatgctgggatatctggttaaac s panTro4.chr19 58986932 624 + 63644993 acagtgggattttagccataaaaaagaaaggaaatctgacatatcctacaatatagatgtagctcgaggatattatgctgagtaaactaagtcaggcacaaaagaacaagtgttatgattccactcatacatcctagaataagcaaattcatacagataaaaattagaatgggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacaaagtcaggagatcgagaccagcctggccaacatggtgaaaccttgtctctact---aaaaaaaaaaaaaaaaacttagccaggcatggtggtgagcgccagtgatcccagctactcgggagggagaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagattaggccactgtactccagcctgggtgacgaagcaagactccatctccg----aaaaaaaaaaaaaaagaaattagaatggaggttaccaggggctgggaggaccgcggcaaatagagagttattggttagagggtgtagagttcatattgggaattgtgattgttaatttgatttatcagctagaccaggccacaggatgctggg-tatctggttaaac i panTro4.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=37464.000000 s hg38.chr19_GL949748v2_alt 53813 145 + 1064304 attatttctgggcgtgtctgtgagggtgtttttagaaagatcagcatttgaatctaatgctgagtcgggcaggttgg-ccttcctaatggaggtgggtattctgctgagggccaggatgggagaaaaaggtggCAGAGCCACcaca s panTro4.chr19 58987556 145 + 63644993 attatttctgggcgtgtctgtgagggcgtttttagagagatcagcatttgaatctaatgctgagtcgggcaggttgg-ccttcctaatggaggtgggtattctgctgagggccaggatgggagaaaaaggtggCAGAGCCACcaca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102623523 145 - 106955855 attatttctgggtgtgtctgtg-gggtgtttttagagagatcagcgtttgaatccaatgctgagtcgggcaggttggcccttcctaatggaggtgggcattctgctgaaggccaggatgggagaaaaaggtggaagaGCCACcaca i nomLeu3.chr10 I 1486 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=56020.000000 s hg38.chr19_GL949748v2_alt 53958 100 + 1064304 gtggctcacgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagtttgagaccagcctgagtaacatagtgagatccc s panTro4.chr19 58987701 100 + 63644993 gtggctcacgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagtttgagaccagcctgagtaacatagtgagatccc i panTro4.chr19 C 0 I 136 s ponAbe2.chr19 55863528 100 + 60714840 gtggctcacgcctgtaatctcagcactttgggaggccaaggcagaagggctgcttgaggccaggagttcgagaccagcctgagtaacatagtgagatccc i ponAbe2.chr19 I 7657 C 0 s nomLeu3.chr10 102623668 100 - 106955855 gtggcttatgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagttcgagaccagcctgagtaacatagtgagatccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=210134.000000 s hg38.chr19_GL949748v2_alt 54058 547 + 1064304 gtctctacaaaaaatttaaaaattaCACGgggcactgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctactaaaaagtacaaaaaatcagccgggtgtgtggtgggcacctgtaatctcagctacccaggaggctgaggcaggagaattgcttgagcccaggaggtggaggctgcagtgagctgtggtcataccactgcactccagcctgggtacagagtgagactttgtctcaaaaaaaggaaaaggagggaaggaaggaaggaagtaaggaaggaaggaaggaagggaaagagagagaggaaggaaggaatgaaggagaaagagaaagaaagaaaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagcaagcaagcaagcaagcaggcaagcaagcgggggctcacg s panTro4.chr19 58987937 464 + 63644993 gtctctacaaaaaatttaaaaaTTACACGgggcactgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctactaaaaagtacaaaaaatcagccgggtgtgtggcgggcacctgtaatcccagctacccgggaggctgaggcaggagaattgcttgagcccaggaggtggaggctgcagtgagctgtggtcataccactgcactccagcctgggtacagagtgagactttgtctcaaaaaaaggaaaGgga------------------------aggaaggaaggaagggaaagagagagaggaaggaaggaatgaaggagagagag------------gaaggaaggaat-----------------------------------------------gaaagaaaggaaggaaggaaggaaggaaggaaggaagcaggcaagcaagcgggggctcacg i panTro4.chr19 I 136 C 0 s ponAbe2.chr19 55863628 458 + 60714840 atctctacaaaaaatttaaaaattacacgggGCAGTgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctttactaaaaagtacaaaaaatcagccaggtgtgtggggggcacctgtaatcccaactacccgggaggctgaggcaggagaattgcttgagcccgggaggtggaggctgcagtgagctgtggtcatatcactgcactccagcctgggtacagagtgagaccttgtctcaaaaaaaGGAgagggaaggaaggaagga------------aggaaagaaggaagggaaagagagacaggaaggaaggaatgaaggagaaaga-------------gaaagaaggaaa-----------------------------------------------aagaaaaagaaagaaagaaagggaa-----------------aagcaagcaggggctcacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102623768 439 - 106955855 gtctctacaaaaaatttaaaaattaCACGgggcactgtggctcatgcctgtaatcccagcactttgggaggctgaggctgaggcaggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctaataaaaagtacaaaaaatcagcagggtgtgtggtgggcacctgtaatcccagctacccgggaggctgaggcaggagaattgcttgagcctgggaggtggaggctgcagtgagctgtggtcataccactgtactccagcctgggtacagagttagaccttgtctcaaaaaaaggaaagggaaggaaggaagga------------aggaaggaaggaagg------aaggaaggaaggaagg---gagggagggaggg------------aagggaaggaaa-----------------------------------------------gagagagaggaaggaaggaatgaag-----------------gaGAAAGA----------- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=195365.000000 s hg38.chr19_GL949748v2_alt 54605 357 + 1064304 cctgtaatcccagcactttgggaggccgaggcgggcagatcaa--gaagtcaggagatggagaccatcctggctaacacagtgaaac-------ctacgaaaaa---------------agccgggcatggtggcgggcgcctgtagtcccagctactcgggagg--ctgaggcaggagaatggcgtgaacccgggag-gcggagcttgcagtgagcagagatcgcacc-actgcactccagcctgggcgacagagcgagactccatctcaaaaaaa------------aaaaaaagaaagaaagagagagagag---------gaaggaagggaggaaggaaggaaggaaggaaggaaggaagg--------------------------------------------------aagggaaggagaaaaagaaagaaaggaaggaaggaag-----------------------------------gaag s panTro4.chr19 58988401 336 + 63644993 cctgtaatcccagcactttgggaggccgaggcgggcagatcaa--gaagtcaggagatggagaccatcctggctaacacagtgaaac-------ctacgaaaaa---------------agccgggcatggtggcgggcgcctgtagtcccagctactcgggagg--ctgaggcaggagaatggcgtgaacccgggag-gcggagcttgcagtgagccgagatcgcacc-actgcactccagcctgggcgacagagtgagactccgtctcaaaaaaa------------aaaaaaa-aaagaaataaagaaagag---------------agagag----------aggaaggaaggaaggaagg--------------------------------------------------aaggaaaggagaaaaagaaagaaaggaaggaaggaag--------------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864086 394 + 60714840 cctgtaataccagcactttgggaggccaaggcgga-ggatcac--gaggtcaggagattgagaccatcctggctaacacggtgaaac-------ctacgaaaaa-----tacaaaagttagccgggcatggtggcaggcgcctgtagtcccagctacttgggagg--ctgaggcaggagaatggcatgaagctgggag-gcggagcttgcagtgagctgagatcgtgccaactgcactcccacctgggggacagagcgagactccataaaaaaaaaa------------aaaaaaagaaataaagaaagagagag-------aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg----------------agggaaggaaaaaagaaggaaaga---------aaaggaaagaaggaaagaaaagaaagaaaagaaagaaa-----------------------------------gaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624207 443 - 106955855 -----AAAAccagcactttgggaggccaaggcgggcgaatcac--gaggtcaggagatcgagaccatcctggctaacacagtgaaac-------ctatgaaaaa-----tacaaaagttagccaggcatggtggcaggcgcctgtagtcctagctacttgggagg--ctgaggcaggagaatggcgtgaacctgggag-gcggaacttgcagtgagctgagatcgtgccaatggcactccagcctgggggacagagcgagaatctat-----aaaaa------------aaagaaagaaagaaagaaagagagag-------aggaaggaaggaaggaaggaaggaaggaaggaaggagaaaaga-gagatagagat-gaaagaaagaaagaaaagaaagaaagaaaaagaaagaaagaaaaaaagaaaaagaaagaaaagaaagaaagaaaaagaaagaaaaaaagaaaaagaaagaaagaaaaagaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54931619 449 + 59248254 cctgtaatcccagcactttgagaggcagaggcaggtggatcacttaagcccaggagtttgagtctagcctgggcaacatagcaagaccctgtctctacaaagaaaaaaataccaaacttagccaggcatggtagcatgtgcttataaccccacctacttagcagggactgaggca-gaggattgcctgagcccgggggagtgaaggctgcagtgagctgtggtcatgcc-actgcattccagcctgggtgacagagtgagaccttgtctcaagaaaaggaaagggaaggaagaaaGgaaggaaggagagagagagagagaaaagaaagaaagagaaaaagagaaagagagagagaggaaggaaggagaaagagagagagagagagaaagaaaaagaaaagaaagaaagaaaaagaaagaaagagagaaagaaagagaaagaaagaaaaaga---------------------------------------- i macFas5.chr19 I 1977 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=6413.000000 s hg38.chr19_GL949748v2_alt 54962 10 + 1064304 aaagaaag--------------ag s panTro4.chr19 58988737 10 + 63644993 AAAGAAAG--------------AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864480 10 + 60714840 gaaaggag--------------ag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624650 24 - 106955855 aaagaaagaaaaaaagaaagGAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54932068 10 + 59248254 aaagaaaa--------------ag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760802 10 + 50890351 aaagaaaa--------------ag i chlSab2.chr6 I 3292 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e papAnu2.chr19 47046271 2062 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=148730.000000 s hg38.chr19_GL949748v2_alt 54972 82 + 1064304 GTTTTAGTGTAGATAGTGGTGATGGTTACACAGCGGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT s panTro4.chr19 58988747 82 + 63644993 GCTTTAGTGTAGATAGTGGGGATGGTTACACAACGGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864490 82 + 60714840 gttttagtatagatagtGGTGATGGTTACAAAACAGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624674 82 - 106955855 GTTTTAGTGTAGATAGTGGTGATGGTTACACAGCAGCCTCAATTTACTTCATAGTTATCTATTTGACACTAAAttttttttt i nomLeu3.chr10 C 0 I 358 s rheMac3.chr19 59912638 82 + 64156825 gttttagtatagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i rheMac3.chr19 I 3434 C 0 s macFas5.chr19 54932078 82 + 59248254 gttttagtatagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760812 82 + 50890351 gttttagtgtagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e papAnu2.chr19 47046271 2062 + 51301725 I a score=26342.000000 s hg38.chr19_GL949748v2_alt 55054 20 + 1064304 ATGGTATTAAGGTTTCTGgg s panTro4.chr19 58988829 20 + 63644993 ATGGTATTAAGGTTTCTGgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864572 20 + 60714840 ATGGTATTAAGGTTTCTGgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59912720 20 + 64156825 ATGGTGTTAGGGTTTCTGgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932160 20 + 59248254 ATGGTGTTAGGGTTTCTGgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760894 20 + 50890351 ATGGTGTTAAGGTTTCTGgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102624756 358 - 106955855 I e papAnu2.chr19 47046271 2062 + 51301725 I a score=339079.000000 s hg38.chr19_GL949748v2_alt 55074 187 + 1064304 ccaggcacagtggctcacatctgtaatcccagcactttgagagactgaggtgggcagatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaa-cactgtctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag s panTro4.chr19 58988849 187 + 63644993 ccaggcgcagtggctcacatctgtaatcccagcactttgagagactgaggtgggcagatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctactaaaaatacaaaaattaactaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864592 187 + 60714840 ccaggcgcagtggctcaggtctgtaatcccagcactttgagaggctgaggtgggaagatcacctgaagtcgggagttcgagaccagcctggccaacatggtgaaa-ctctgtctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59912740 187 + 64156825 ccaggcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccaggcgtggtggtgcacccctttaatccagttactcaggaggctgaagcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932180 187 + 59248254 ccaggcacagtggctcacgcctgtaatcccaatactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccaggcgtggtggcgcacccctttaatccagttactcaggaggctgaagcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048333 187 + 51301725 ccaggcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccagacatggtggcacacccctttaatccagttactcaggaggctgaagcag i papAnu2.chr19 I 2062 C 0 s chlSab2.chr6 46760914 188 + 50890351 ccacgcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaacccccatctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctttaatccagttactcaggaggctgaagcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102624756 358 - 106955855 I a score=198623.000000 s hg38.chr19_GL949748v2_alt 55261 100 + 1064304 gagaatcgcttgaacccgggaggcagaggttgtggtgagccgagatcatgccattgcactacagcctgggcaacaagagcaaaactctgtctcaaa--aa--aa s panTro4.chr19 58989036 100 + 63644993 gagaatcgcttgaacccaggaggcagaggttgtggtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaaccctgtctcaaa--aa--aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864779 102 + 60714840 gaggatcgcttgaacccaggagccggaggttgtggtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaaccgtgtctcaaaataa--aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625114 96 - 106955855 gagaatcgcttgaacccgggaggcggaggttgtggtgagccgagatcatgccattgcactccagcctgggcaacaagagcaaaaccctgtctcaat-------- i nomLeu3.chr10 I 358 C 0 s rheMac3.chr19 59912927 96 + 64156825 gagaatctcttgaacccaggaggcaggggttgcagtgagttgagatcacgccactgcactccaacctgggcaagaagagtgaaaccctgcctc--a--aa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932367 98 + 59248254 gagaatctcttgaacccaggaggcaggggttgcagtgagttgagatcacgccactgcactccaacctgggcaagaagagtgaaaccctgcctcaaa--aa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048520 97 + 51301725 gagaatctcttgaacccgggaggcgggggttgcagtgagtcgagatcacgccattgcactccagcctgggcaagaagagtgaaaccctgcctc-aa--aa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761102 100 + 50890351 gagaatctcttgaacccgggaggcgggggttgcagtgagttgagatcacgccattgcattccagcctgggcaagaagagtgaaaccctgcctcaaa--aaaa-- i chlSab2.chr6 C 0 I 14 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=34925.000000 s hg38.chr19_GL949748v2_alt 55361 25 + 1064304 taaaataaaataaaataaaataaGG s panTro4.chr19 58989136 25 + 63644993 taaaataaaataaaataaaataaGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864881 25 + 60714840 taaaataaaataaaataaaataaGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625210 24 - 106955855 -aaaataaaataaaataaaataaGg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913023 25 + 64156825 aaaaaaaaaaaaaaaaaagataaGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932465 25 + 59248254 aaaaaaaaaaaaaaaaaaaaaaaGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048617 25 + 51301725 aaaaaaaaaaaaaaaaaaaaaaagg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=1385178.000000 s hg38.chr19_GL949748v2_alt 55386 670 + 1064304 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTGATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACTACAGGAGTTGAAGTTTGCAGAGCACTCGTTTCC---AGGGAATGTCTGCACTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTTA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACtc s panTro4.chr19 58989161 669 + 63644993 TTTCTATTCTGAATACTTTTACTTACACACAAAAAG-CAGAGTTGATCCTGAGAAAAGG----GATAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACTACAGGAGTTGAAGTTTGCAGAGCACTCATTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCTAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCTACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTTTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTGCACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGTGTTCGTATTGAAGAGATGAAAGCACTTCAttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864906 670 + 60714840 TTTCTATTCTGAATATTTTTACTTACATACAAAAAGTCAGAGTTGATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACAAAGTTGAAACTAGAGGAGTTGAAGTTTGCAGAGCACTCATTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCCTGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATACCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTTCTTACACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTATCAGGCAGATTTCAGGTATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 102625234 671 - 106955855 tttctattctgaatacttttacttacagacaaaaagtcagagttgatcctgagaaaagg----ggtaagccaatgaagc-caggtggtggaggcattcagcaaaactcacgaagttgaaactagaggagttgaagtttgcagagcactCGTTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCATGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TATTTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTCTCCGCAGTCCCAGTGGTTAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GGTCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTTGAGTCGTCACTGTCTCTCTCCCACCCAAGAGTGTGGGCAGTAACAGCTTT-TCCTAG-ACTTTCAGTTCCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCATATTGAAGAGATGAAAGCACTTCACtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913048 670 + 64156825 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCGCTTGTTTCC---AGGGAGTGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGTTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATATTCTGCATTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGACTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCGCAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCGGAGTGGAAACAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGCGTTTGAGTATTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932490 670 + 59248254 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCGCTTGTTTCC---AGGGAGTGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGTTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATATTCTGCATTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGACTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCGCAGATGGGAGAAGAGCTGGAGTCGTCCCTGCCTCTCTCCCACCCCGGAGTGGAAGCAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGGCGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGTATTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i macFas5.chr19 C 0 I 12 s papAnu2.chr19 47048642 670 + 51301725 tttctattCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCACTTGTTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGCTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCGTGATATTCTGCAGTCCCAGTGGACAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGGCTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCGGAGTGGAAGCAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGACGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGCACTTGGCTCACAGGAAATGCTCCTCTGTCTCAGGTAGATTTCAGGCATCAAATAGGTAA--------CCCTGAAAATGCTTCAGACTTGGCCTTGAAGGATTCGTATTGAAGAGATGAAAGCACtccgctc i papAnu2.chr19 C 0 I 311 s canFam3.chr1 19540681 751 - 122678785 tttctattgtaagcacttttctttaaggaaaaaaggtt-gagtctatattaaaaacaaaacacattaagccaataaagtacaggtagcaaaggcattcagcagaaaccctgaacttggaacaagactaatcgaaatttgtaaagcaccgGCTTACATTATGTAGCATATGCATTGCACTCAGCGAGATTTCTTTTTTTTTTTTTTTTTAAGATTTCTGCAGCCGATAAACCAAAGCTGATGTTTTATTTTCTC-TTTCCATCCCCAGTCCAAATCTCTtaccctacttgatcttagccaagagacagagaagcaatACCAAACCTCTTACCAATTCTATCGTTTTCTGTGGTCCCAATGTGT-GCCCTGTGACACTTACTGAGACAGAGGAGTGGGAGTAGTTGGGAAATCATGGCAGCACGTCACTTTCTGCCTGTCCAACGCCTACTTTCAGTTCTGCAGTCCACGGGTGGGCGAGGAGCTGGGGTGGCCATGGCCTTGCCCTGAATCCACAGTGTCGA-AGTAATGATTTT-TCTCAGACTTTTCAGTTCCTCCTTCCATG-CCGCTTTCTGAAAATGTTGTTGGTGCTGCCGATTGCAACATACTCTTTG--CACACTTGGCTTCAAAGACTTGGCTCACAGAAAGTCCTCATCTGTC----ACAGATTTCAGGCATCAAATGTGTGACGCCCCCTCCCCCCAGATGCCCAAGGCTTGAGCCTGAAGAGTTCCTA-AGAGGAGATAAAGGTACCTCACTG i canFam3.chr1 I 2530 C 0 e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=3008.000000 s hg38.chr19_GL949748v2_alt 56056 2 + 1064304 tt s panTro4.chr19 58989830 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865580 2 + 60714840 tt i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 102625905 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913718 1 + 64156825 -t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933172 1 + 59248254 -t i macFas5.chr19 I 12 C 0 s papAnu2.chr19 47049623 1 + 51301725 -t i papAnu2.chr19 I 311 C 0 s canFam3.chr1 19541432 2 - 122678785 TT i canFam3.chr1 C 0 I 22356 e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=456377.000000 s hg38.chr19_GL949748v2_alt 56058 274 + 1064304 tttttttttttt-gagatggtgtctggttctgttacctgggctggagtccagtggcacgatctcaggtcattgcaacttcagcctcctgggttcaagcaattctccggcctcagcctcccaagtagctgggattataggcgcatgccaccatgcccggctaatgtttgtatttttagttaagatgaggtttca-caagttagctgggctagtcttgaactcctcgcctcaagtgatccacctgcctcggcctcccaaactgctgggattacaggca s panTro4.chr19 58989832 275 + 63644993 tttttttttttttgagatggtgtctggttctgttacctgggctggagtccagtggcacgatctcaggtcattgcaacttcagcctcctgggttcaagcaattctccggcctcagcctcccaagtagctgggattataggcacatgccaccatgcccggctaatgtttgtatttttagttaagatgaggtttca-caagttagctgggctagtcttgaactcctcgcctcaagtgatccacctgcctcggcctcccaaactgctgggattacaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865582 275 + 60714840 tttttttttttttgagatggtgtctggttctgttacccaggctggagtccagtggcacgatctcagctcattgcaacttcagcttcctgggttcaagcaattctccagcctcagcctcccaagtagctgggattataggtgcatgccaccatgcccagctaatgtttgtatttttagttaagatgaggtttca-caagttagccaggctagtcttgaactcctggcctcaagtgatccacctgcctcagcctcccaaactgctgggattacagtca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625907 273 - 106955855 ttttttttttt--gagatggtgtctggttctgtcacccaggctatagtccagtggcacgatctcagctcattgcaactttagcctcctgggttcaagtgattctcctgcctcagcct-ccaagtagctgggattacaggcgcatgccaccatgcccaactaatgtttgtatttttagttaagacgaggtttcaccaagttggctgagctggtctcaaactcctggcctcaagtgatccacctgcctcagcctcccagactgctgggattacaggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913719 273 + 64156825 tttttttttttttgagatggaatctgattctgtcacctggactggagtccagtggcgcaatctcggctcattgcaacttcagcctcctgtgttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggctcatgccactacacccggc---tgtttgtatttttagttaagatgaggtttcaccaagttggccaggctggtctctaactcctggcctcaagtgatccacttgcctcggcctccccaactgctgggattacaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933173 273 + 59248254 tttttttttttttgagatggaatctgattctgtcacctggactggagtccagtggcgcaatctcggttcattgcaacttcagcctcctgggttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggctcatgccactacacccggc---tgtttgtatttttagttaagatgaggtttcaccaagttggccaggctggtctctaactcctggcctcaagtgatccacttgcctcggcctccccaactgctgggattacaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47049624 273 + 51301725 tttttttttttttgagatggaatctggtcctgtcacctggactggagtccagtggtgcaatctcggctcattgcaacctcagcctcctgggttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggtgcatgccaccacacctggc---tgtttgtatttttagttaagatgaggtttcaccaagttggtcgggctggtctcgaactcctggcctcaagtgatccacctgcctcggcctccccaactgctgggattacaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19541434 22356 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=764138.000000 s hg38.chr19_GL949748v2_alt 56332 343 + 1064304 tgagccactgtgccagg---------ccTTCATCACCAt-----tttttttttttcttttgagacagagttccactctttcgcccaggctggagtgaagtggcaaaatctcatctcattgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacatgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgatctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAG-CTCA--T s panTro4.chr19 58990107 341 + 63644993 tgagccactgtgccagg---------ccTTCATCACCAt-----ttttttttt--cttttgagacagagttccactctttcgcccaggctggagtgaagtggcataatctcatctcattgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacacgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAG-CTCA--T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865857 338 + 60714840 tgagccactgtgccagg---------ccTTCATCACCAt-----ttttttttt------tgagatagacttccactcttttgcccaggctggagtgaagtggcataatctcatctcactgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacacgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAGCCTCA--T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102626180 351 - 106955855 tgagccaccacgccaggACTTCATCACCTTCATCACCtt-----ttttttttttttttttgagatggagttccactctttcgcccaggctggagtgaagtggtgtaatctcagctcactgcaacctccatcccccaggttcaagtgattctcctgcctcagccgcccgagtagctgggattacaggagccctccaacatgcccagtta------------------------------------------atttttgta-----tttttagtagagacgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA--T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913992 387 + 64156825 tgagccaccgcaccagg---------ccGTCATCACCCC----tttttttttttttttttgagattgagttccactcttttgcccaggctggagtgaagtggcataatctcagctcactgcaacctctcccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagttaatttattatc---attattattattatactttaagccaggtcatttttgta-tttttttttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA-TT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933446 384 + 59248254 tgagccaccgcaccagg---------ccTTCATCACCAC--------tttttttttttttgagatggagttccactcttttgcccaggctggagtgaagtggcataatctcagctcgctgcaacctctacccaccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagttaatttattatc---attattattattatactttaagccagttcatttttgtattttttttttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA-TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47049897 349 + 51301725 tgagccaccgcgccagg---------ccttcatcaccactttttttttttttttttttttgagatggagttctactctttcgcccaggctggagtgaagtggcgtaagctcagctcactgcaacctccaccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagtta------------------------------------------atttttgta----ttttttagtagagacgaggtttcaccatgttggccagggtagtctcgaactcctgacctcaagtgatccacccacctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccagtcatgag-ttca-tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761216 395 + 50890351 TGAGCCACCGCACCAGG---------CCTTCATCACCACttcttttttttttttttttttgagatggggttccactctttcgcccaggctggagtgaagtggcataatctcagctccctgcatcctccacccaccagtttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcctagttaatttattatcattattattattattatactttaagccagttaatttttgta-tttttgtttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcacgtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCATTT i chlSab2.chr6 I 14 C 0 e canFam3.chr1 19541434 22356 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=144425.000000 s hg38.chr19_GL949748v2_alt 56675 50 + 1064304 TTTTTAAGTTCAGaatatttcagtacatatctatctttatcaaataagaa s panTro4.chr19 58990448 50 + 63644993 TTTTTAAGTTCAGaatatttcagtacatatctatctttatcaaataagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866195 50 + 60714840 TTTTTAAGTTCAGACTATTTCAATACATATCTATCTTTATAAAATCAGAA i ponAbe2.chr19 C 0 I 25 s nomLeu3.chr10 102626531 50 - 106955855 TTTTTAAGTTCAGaatatttcagtacgtatctatctttatcaaataagaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914379 50 + 64156825 TTTTTAAGTTCAGaatatttcagtacatatatatctttatcaaataagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933830 50 + 59248254 TTTTTAAGTTCAGaatatttcagtacatatatatctttatcaaataagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050246 50 + 51301725 tttttaagttcagaatatttcagtatatatatatctttatcaaataagaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761611 50 + 50890351 TTTTTAAGTTCAGaatatttcagtacatatatatcttcatcaaataagaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19563790 50 - 122678785 tttttaatcccaaaatattttagtacatagctatctttatcagatgagaa i canFam3.chr1 I 22356 C 0 e calJac3.chr22 45321063 9366 + 49145316 I a score=246775.000000 s hg38.chr19_GL949748v2_alt 56725 143 + 1064304 -ccattttaaaa---ataatataagcaccacagcactgtcacatcaagaaagttaagagtacctccttgataccagctaat-acccattcagtactcaaatttccctgattgtctcaaaaatgtcatttctatcaggtttttaaagaa s panTro4.chr19 58990498 143 + 63644993 -ccattttaaaa---ataatataagcaccacagcactgtcacatcaagaaagttaagagtacctccttgataccagctaat-acccattcagtactcaaatttccctgattgtctcaaaaatgtcatttctatcaggtttttaaagaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102626581 101 - 106955855 -ccattttaaaa---ataatataagcaccatagcactgtcacatcaggaaagttaaGAGTG-------------------------------------------cttgattgtctcaaaaatgtcatttctatcaggtttttaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914429 143 + 64156825 -ccattttaaaa---ataatataaacaccatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaat-acccattcagtattcaaatttccttgattgtctcaaaaatgtcatttctatcaggcttttaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933880 143 + 59248254 -ccatttttaaa---ataatataaacaccatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaat-acccattcagtattcaaatttccctgattgtctcaaaaatgtcatttctatcaggcttttaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050296 143 + 51301725 -ccattttaaaa---ataatataaacaccaTAGCACTGTCACATCAGGAAAGTTAAGAGTACTTCCTTGATACTAGCTAAT-ACCCATTCAGTATTCAAATTTCCCTGATTGTCTCAAAAATGTCATTTCtatcaggcttttaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761661 143 + 50890351 -ccattttaaaa---ataatataaacactatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaac-acccattcagtattcaaatttccctgattgtctcaaaaatgtcgtttctatcaggcttttaaaaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19563840 133 - 122678785 tctgttttaaaaaatatataataaccaccaaagcaatatcatagtagta--------------tctttgctaccatcgcataatccagtcagtatccatatttcctcaataatatcaaatatatt-cttcggtcagtttttttaaaaa i canFam3.chr1 C 0 I 226 e ponAbe2.chr19 55866245 25 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=98561.000000 s hg38.chr19_GL949748v2_alt 56868 55 + 1064304 taaatcaggatccaataaaagtctacagattgcatttgataattatgtTAATTTA s panTro4.chr19 58990641 55 + 63644993 taaatcaggatccaataaaagtctgcagattgcatttgataattatgtTAATTTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102626682 55 - 106955855 taaatcaggatccaattaaagtctgcagattgcatttaataattatgtTAATTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914572 55 + 64156825 taaatcagaatccaattaaagtctgcagattgaatttgataattatgtTAATTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934023 55 + 59248254 taaatcagaatccaattaaagtctgcagattgaatttgataattatgttaattta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050439 55 + 51301725 taaagcagaatccAATTAAAGTCTGCAGATTGAATTTGATAATTATGTTAATtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761804 55 + 50890351 taaatcagaatccaattaaagtctgcagattgaatttgataattatgtTAATTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19563973 226 - 122678785 I e ponAbe2.chr19 55866245 25 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=10948.000000 s hg38.chr19_GL949748v2_alt 56923 4 + 1064304 gcct s panTro4.chr19 58990696 4 + 63644993 gcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866270 4 + 60714840 gcct i ponAbe2.chr19 I 25 C 0 s nomLeu3.chr10 102626737 4 - 106955855 gcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914627 4 + 64156825 gcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934078 4 + 59248254 gcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050494 4 + 51301725 gcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761859 4 + 50890351 gcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19563973 226 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=830598.000000 s hg38.chr19_GL949748v2_alt 56927 292 + 1064304 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccggggcaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacctcatctctactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcaaaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaac-agagtgagactcagtct--caaaaaaaaaaaaaa s panTro4.chr19 58990700 292 + 63644993 ggcgcagtggctcacacctgtaatcccaacactttgggagaccagggcaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaagctcatctttactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaacctgggaggcaaaggttgcagtgagctgagatcgcatcattgcactccagcctgggcaat-agagtgagactcagtct--caaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866274 291 + 60714840 ggcacagtggctcacgcctgcaatcccaacactttgggagaccgaggtaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacctcatctctactaaaaatacaaaaattagctgggtgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaacctggcaggcaaa-gttgcagcgagccgagatcgcaccattgcactccagcctgggcaac-agagtgagactcagtct--caaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102626741 292 - 106955855 ggcacagtggctcattcctgtaatcccaacactttgggagaccgaggcaggtagatcacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacatcatctctactaaaaatacaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcaaaggttgcagtgagctgagatcgcatcattgcactccagcctgggcaac-agagcgagactctgtat--caaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914631 286 + 64156825 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcagctaaggtcaggagttcaagaccagcctggccaa-catggtgaaacctcgtctctactagaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgagggtgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatcgcaccattgcactccagcctaggcaac-agagagagtctc-------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934082 293 + 59248254 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcagctaaggtcaggagttcaagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgagggtgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatggcaccattgcactccagcctaggcaac-agagagagactctgtctcaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050498 291 + 51301725 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccaaagcaggtagatcacctaaggtcaggagttcgagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcatggtggtgcacacctgtaatcccagctagtcatgaggctgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgggctgagatcgcaccattgcaccccagcctgggcaac-agagagagactccgtct--caaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761863 291 + 50890351 ggcacagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcacctaaggtcaggagttcgagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgaggctgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatcgcaccattgcactccagcctaggcaac-agagagagactctgtct--caaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330429 289 + 49145316 ggtgcggtggctcatgcctgtaatcccagcactttgagaggtggacgcagatggatcacctgaggtcgggagttcgagaccagcctgacgaa-cat--caaacccccgtctctactaaaaaca-gaaaattagctggacgtggtggcgcgtgcctgtagtcccagctactctggaggctgaagcaggagaatctcttgaacccaggaggcggaggttgcggtgaaccgagatcgcgccattgcactccagcctgggcaacaagggcaaaactccgtct--caaaagcaaaaaaag i calJac3.chr22 I 9366 C 0 e canFam3.chr1 19563973 226 - 122678785 I a score=-507.000000 s hg38.chr19_GL949748v2_alt 57219 2 + 1064304 -aa s panTro4.chr19 58990992 1 + 63644993 -a- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866565 2 + 60714840 -aa i ponAbe2.chr19 C 0 I 742 s nomLeu3.chr10 102627033 2 - 106955855 -aa i nomLeu3.chr10 C 0 I 9 s rheMac3.chr19 59914917 2 + 64156825 -aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934375 2 + 59248254 -aa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050789 2 + 51301725 -aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762154 2 + 50890351 -aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330718 2 + 49145316 -aa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564199 2 - 122678785 ga- i canFam3.chr1 I 226 C 0 a score=-1309.000000 s hg38.chr19_GL949748v2_alt 57221 1 + 1064304 -a s nomLeu3.chr10 102627044 1 - 106955855 -A i nomLeu3.chr10 I 9 C 0 s rheMac3.chr19 59914919 1 + 64156825 -a i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54934377 1 + 59248254 -a i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47050791 1 + 51301725 -a i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 46762156 1 + 50890351 -a i chlSab2.chr6 C 0 I 11 s calJac3.chr22 45330720 1 + 49145316 -a i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564201 1 - 122678785 t- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55866567 742 + 60714840 I e panTro4.chr19 58990993 0 + 63644993 C a score=104318.000000 s hg38.chr19_GL949748v2_alt 57222 44 + 1064304 TGTTAATTTGAATCAGACAAAATTTTTTATTTTTTTGTTAAAAT s panTro4.chr19 58990993 44 + 63644993 TGTTAATTTGAATCAGACaaaattttttatttttttgttaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867309 44 + 60714840 TGTTAATTTGAATCAGACAAAATTTTTTACTTTTTTGTTAAAAT i ponAbe2.chr19 I 742 C 0 s nomLeu3.chr10 102627045 44 - 106955855 TGTTAATTTGAATCAGACAAAATTTTTTATTTTTTTGTTAAAAT i nomLeu3.chr10 C 0 I 299 s rheMac3.chr19 59914931 44 + 64156825 TGTTAATTTAAATCAGACAAAATTTTTGATTCGTTTGTTAAAAT i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54934389 44 + 59248254 tgttaatttaAATCAGACAAAATTTTTGATTCGTTTGTTAAAAT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47050803 44 + 51301725 tgttaatTTAAATCAGACAaaatttttgatttgtttgttaaaat i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 46762168 44 + 50890351 CGTTAATTTAAATCAGACAAAATTTTTGATTTGTTTGTTAAAAT i chlSab2.chr6 I 11 C 0 s calJac3.chr22 45330721 5 + 49145316 -----------------aaaga---------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564202 44 - 122678785 cgataGGCCAATTCAGACAAAATTCCCAATGTCTTTGTTAAAAT i canFam3.chr1 C 0 C 0 a score=425756.000000 s hg38.chr19_GL949748v2_alt 57266 140 + 1064304 AAGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCTTGCATTTGGAAGAAGAGCAAAATGCCCCGAAGTCTCGTTTTTGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT s panTro4.chr19 58991037 140 + 63644993 aaGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCTTGCATTTGGAAGAAGAGCAAAATGCCCCCAAGTCTCGTTTTTGTTTTCAGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867353 140 + 60714840 AAGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGCCCCCAAGTCTTGTTTTTGTTTTCGGA-TTTTTTGTCTTGATAGCACTTACTCTTCTTACTGTTTTGGAACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627388 141 - 106955855 aagaaaTCAAGCAAGTT---AGTTTTTATCCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGCCCCCAAGGCTTGTTTTTGTTTGCGGATTTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAC i nomLeu3.chr10 I 299 C 0 s rheMac3.chr19 59914975 139 + 64156825 AAGAAATCAAGCAAGTT---GGTTTTTAACCATG-TTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i rheMac3.chr19 C 0 I 322 s macFas5.chr19 54934433 139 + 59248254 AAGAAATCAAGCAAGTT---GGTTTTTAACCATG-TTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i macFas5.chr19 C 0 I 325 s papAnu2.chr19 47050847 139 + 51301725 aagaaatcaagCAAGTT---GGTTTTTAACCATG-tttttttCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762212 140 + 50890351 AAGAAATCAAGCAAGTT---GGTTTTTAACCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGTTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTCCTGTTTTGGAACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330726 131 + 49145316 gaaaGATCAAGTC--TT---GGGTTTTAACTATG-TTTTCTCCATCACGCATTTGGGAGAAGAGCAAGATG-CCCCAAAGCTTGTTTTTGTTTTCGGA-TCTTCTGTCTCGGTAGT-----CTCTTCTTACTGCTTTGGAACAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564246 120 - 122678785 AAGAAGCCAAGCACATCATAGGTTTTT----ATGATTTTTTCCACCATTAATTTGGAAGAAAAGCAACATGCCCCTGAG--------------------ACTATTGTCTTGACAGAGCTTACTTATCTTTCTGTTCAGTAATAT i canFam3.chr1 C 0 C 0 a score=368490.000000 s hg38.chr19_GL949748v2_alt 57406 105 + 1064304 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC s panTro4.chr19 58991177 105 + 63644993 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867493 105 + 60714840 AGAAACGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATAATTTTTAAAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627529 105 - 106955855 AGAAAAGTCAACGAGGCAACAATCTG-TAAGGAGTAAAACCAACTATAATTACAGGTATTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915436 105 + 64156825 agaaaAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i rheMac3.chr19 I 322 C 0 s macFas5.chr19 54934897 105 + 59248254 aGAAAAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i macFas5.chr19 I 325 C 0 s papAnu2.chr19 47050986 105 + 51301725 AGAAAAGCCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762352 105 + 50890351 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330857 105 + 49145316 AGAAGAGTCAACGAGACGACCAGTTC-TGACGGAGTAAAGCAATTACAATCTCAGGTGCTTCTTTGAGAGTGATTTTCACAGGATGTGGCCATGATTTTTCAAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564366 106 - 122678785 AGAAAAATCAACAAGGCAACGAATTATTGGGGAGAGAAACCAATTATAATCACAGGAGTTTCTTTGAGGGTGATCTCCAAAAGATATGGCAATGATTTTTAAAGTC i canFam3.chr1 C 0 I 210 a score=601735.000000 s hg38.chr19_GL949748v2_alt 57511 175 + 1064304 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAATGTTTGTGAA-TATTCATTTAGTTCTCCATATTGTACCAGAAAACAAGACTGATATTCTTGTGAATCTTCTCAATTCAACTCTTTATCAAATCAGATT s panTro4.chr19 58991282 175 + 63644993 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACGTTTGTGAA-TATTCATTTAGTTCTCCATATTGTACCAGAAAACAAGACTGATATTCTTGTGAATCTTCTCAATTCAACTCTTTATCAAATCAGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867598 175 + 60714840 TTAGGACTCTTACAAGACCCTTTTGTTCAAATAATGGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTGTGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTTAATTCAACATTTTATCAAATCAGATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627634 175 - 106955855 TTGGGATTCTTATAAGATTCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATAAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915541 175 + 64156825 TTGGGACTCTTAGAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54935002 175 + 59248254 TTGGGACTCTTAGAAGACCCTTTTGTTCAAATAACATTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051091 175 + 51301725 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATgaa-tattcatttaattctccATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762457 175 + 50890351 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATACCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330962 181 + 49145316 TTGGGACTCTTACAAGACCCTTTTGTTC-AATGACAGTTTTCTATGCATGAATTTATTTCAACAGAGAAGAGAACAATTTAGCAACCGTCATGAA-TATTCATGTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCTGATT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564682 172 - 122678785 TTGAGATTCTTATGAGACCCTTTTGTTTAAATAACACTTC--TCTGTGTAGATTTATTTCAACAGAGTAGAGAACAATATAGTAAA----ATGAATTATTTATGTGATTCTCCTAATTGCACC-GGAAACAACACTGATACTTTTGGCAAAGCTTTCACCTCAACACTTT----AATCAgatt i canFam3.chr1 I 210 I 888 a score=1545861.000000 s hg38.chr19_GL949748v2_alt 57686 539 + 1064304 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGGAAAAGAGGACATCTCCTATATTTCTTCTTAACATCTCTGTTGCTAACAAGGAATATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAGTTCCATTCCACTTGGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACGAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggaaggcttgatcccaggagttcaacaccagcctgggcaacatggcctaatcccatctctacaaaaaatac-aaaaattagccaggcttggtggtatatacctgtaatcccagcttctcaggaggctgaggtgggagaatcacttgaacctgggagggggaggtggcagtgagctgagatcgcaccattgtaccc---cagcctgggcaacaagagtgaaactccatctcaaaa---aataataa s panTro4.chr19 58991457 542 + 63644993 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGGAAAAGAGGACATCTCCTATATTTCTTCTTAACATGTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAATTCCATTCCACTTGGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACGAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggaaggcttgatcccaggagttcaacaccagcctgggcaacatggcctaatcccatctctacaaaaaatac-aaaaattagccaggcttggtggtatatacctgtaatcccagcttctcaggaggctgaggtgggagaatcacttgaacctgggagggggaggttgcagtgagctgagatcgcaccattgcaccc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867773 542 + 60714840 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAGTTCCATTCTGCTTAGAAATGAAGAAAAGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacatcagcctggacaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaagtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggtggaagaatcgcttgaacctgggagggggaggttgcagtgagctgagattgcaccattgcactc---cagcctgggcaacaagagtgaaactccatctctaataataataataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627809 544 - 106955855 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAACGAAGATGCCTATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTAGTAAAGTTCCATTCCACTTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAAACAAAAC----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcagggtggatcatacctgtaatcctaagatttcgggagg-tgaggtaggtggatggcttgatcccaggagttcaacaccagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccgggtttggtggtgcatacctttaatcccagcttctcaggaggctgaggtgggagaatcgcttgaacctgggagggggagattgcagtgagctgagatcacaccattgcgccc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915716 540 + 64156825 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTGAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaattgcttgaacctgggatgtggaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataatagt-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54935177 540 + 59248254 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTGAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaattgcttgaacctgggatgtgaaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataatagt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051266 542 + 51301725 CCTTAAATTAGTGTTGTGactcagaaaaaaatctttctccTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGaagatgcatattttaaaactaggCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCAcctagaaatgaagaaagga--------gaccctgattcaaaaaacaaa--aaaag----------------------------------------------------------------------aaagaataatgaatAGCTTAGGGCCAGGTaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaatcgcttgaacctgggatgtggaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataata- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762632 543 + 50890351 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATTTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAATATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatgacttgatcccaggagttcaacactagcctgggcaacatggcctaaccctatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaatcgcttgaacctgggatgtggaggttgcagtgagccgagattgcactgttgcactcttgttgcctgggcaacaagagtgaaactccatctcaaaaaataataat-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45331143 615 + 49145316 CCTTAAATTAGGGTTGTGACTCAG-AAAAAATCTTCCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTGTATCTCTATTTAACATCTCTTTTGCTAACGGTGAAGATGTATATTTTAAAACTAGGCACTGGAATTTTATCAGTCAACAGAAACGCCCTGGTAAAGTTCCATTCCAGTTAGAAATGAAGGAAGGACTGAGCTGgactccgtctcaaaaaaaaaa--aaaaaaaaagaaagaaaaaagaaaTGAAGGAATAAATAGGAtttttttttttttttttttttGAGACCCTGATTCAAAAAATAAAGAATAGCT--Gggtcgggcgcggtggctcaggcctataatcccagcactttgggaggccgaggcgggtggatcacgaggt--caagagatcgagaccatcctggtcaacaaggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgccgtgagccgagatcgcgccattgcactc---cagtctgggtaacgagagtgaaactctgtctcaaaaaaaaaaaa--- i calJac3.chr22 C 0 I 716 e canFam3.chr1 19564854 888 - 122678785 I a score=117675.000000 s hg38.chr19_GL949748v2_alt 58225 57 + 1064304 taa-------------aataa-ataaataaaTAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT s panTro4.chr19 58991999 57 + 63644993 taa-------------aataa-ataaaTAAATAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868315 71 + 60714840 taataataataataataataataTAAATAAATAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628353 56 - 106955855 t---------------aataaaataaataaATAATCATTCACTTTGTTAAGTGTTTATCACACCTAACCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916256 50 + 64156825 --------------------a-ataaataaaTAGTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i rheMac3.chr19 C 0 I 239 s macFas5.chr19 54935717 50 + 59248254 --------------------a-ataaataaaTAGTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051808 54 + 51301725 ----------------aataa-ataaataaatagtcattCACTTTGTTAGGTGTTTATCACACCTAACCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763175 54 + 50890351 ----------------aataa-ataaataaataaTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=2548.000000 s hg38.chr19_GL949748v2_alt 58282 1 + 1064304 A s panTro4.chr19 58992056 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868386 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628409 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916545 1 + 64156825 a i rheMac3.chr19 I 239 C 0 s macFas5.chr19 54935767 1 + 59248254 A i macFas5.chr19 C 0 I 238 s papAnu2.chr19 47051862 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763229 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=15504.000000 s hg38.chr19_GL949748v2_alt 58283 8 + 1064304 AGAATATG s panTro4.chr19 58992057 8 + 63644993 AGACTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868387 8 + 60714840 AGAATATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628410 8 - 106955855 AGAATATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916546 8 + 64156825 agaaTATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936006 8 + 59248254 agaaTATC i macFas5.chr19 I 238 C 0 s papAnu2.chr19 47051863 8 + 51301725 AGAATATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763230 8 + 50890351 AGAATATC i chlSab2.chr6 C 0 I 234 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=17599.000000 s hg38.chr19_GL949748v2_alt 58291 8 + 1064304 TTACCAAA s panTro4.chr19 58992065 8 + 63644993 TTACCAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868395 8 + 60714840 TTACCAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628418 8 - 106955855 CTACCAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916554 8 + 64156825 TTACCAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936014 8 + 59248254 TTACCAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051871 8 + 51301725 Ttactaga i papAnu2.chr19 C 0 I 1727 s chlSab2.chr6 46763472 8 + 50890351 TTACTAAA i chlSab2.chr6 I 234 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=2181526.000000 s hg38.chr19_GL949748v2_alt 58299 1306 + 1064304 ATAAAAAGTCttatagatgaaatcatattatatctgaggtttactttaaaatactccaggagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattggcacccaggtaaaaaa-ctacattcttcagtgtcacttacaggtagatgtagccgtaagtcttcatctaggacaatgataaataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactggtattctagcgtcatcttgaaccatgaagatgagatgaggttcaagatggtggagggtgagccagaagtaacttaggtccataatgctttttggagtcactgtgccagccttggactgctcccttcagatttattctacataagggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaggttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagtaacaatcttg-----tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggttcaatgtgatgtcttcctgggcttcagtcatcagggtggctcaactgagctggaatctccaagatggcacttgcaaatggctggctgttgatgctggatgttggttgaaagctcggctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcggctgggcatggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcaacatcagcctggccaacatggtaaaaccccgtctctactaaaaacaaaat-----------------------------------------taaa---aaaaattagccgg-------------------------------------------------------gtgtgtttgtgcacacctgtaatcccagctactcaggaggccgaggcaggagaattgcttgaacctgggagg-cggaagttgcagtgagccgagatcacaccact--------gcactccagcctgggcaacagaatgagactctgtc-tcaa----ataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtttctcttcttc s panTro4.chr19 58992073 1309 + 63644993 ATAAAAAGTCttatagatgaaatcatattatatctgaggtttactttaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattggcacccaggtaaaaaa-ct--attcttcagtgtcacttacaggtagatgtagccgtaagtcttcatctaggacgatgataaataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcgtcgtcttgaaccatgaagatgagatgaggttcaagatggtggagggtgagccagaagtaacttaggtccataatgctttttggagtcattgtgccagccttggactgctcccttcacatttattctacataggggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaggttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagtaacaatcttgttttttttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggttcaatgtgatgttttcctgggcttcagtcatcagggtggctcaactgagctggaatctccaagatggtgcttgcaaatggctggctgttgatgctggatgttggttgaaagctcggctaggactgttgaatgatatacctgcacatagcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagaaaaggcggctgggcatggtggctcacatctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcaacatcagcctggccaacatggtaaaaccccatctctactaaaaataaaat-----------------------------------------taaa---gaaaattagcggg-------------------------------------------------------gcgtgttggtgcacacctgtaatcccagctactcaggaggccaaggcaggagaattgcttgaacctgggagg-cggaagttgcagtgagccgagatcacaccact--------gcactccagcctgggcaacagaatgagactctgtc-tcaa----ataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtttctcttcttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868403 1308 + 60714840 ATAAAAAGTCTTACAGATGAAATCATACTATATCTGAGGTTTACTTTAAAATACTCCAGCAGAAAATTTAAAATAGACTTGGGTGAGGGGACTTATCTATAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgaattttagctgggcccattgccacccaggtaaaaaa-ctacattcttcaacgtcacttacaggtagatgtagccgtaagtcttcatctaggacaatgacatataagcataaatattgcagacagcttccaaaagattctttaatgaaatacgctttctttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcgtcatcttgaaccatgaagatgagatgacgttcaagatggcggagggtgaaccagaagtaacttaggtccataatgctttttggagtcattgtgccagccttggactgctcccttcagatttattctacataggggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaagttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagcaacaatcttgtgttttttttttttttttttaatcattcctgatctggtgagatgactaggctcagttgagcggttcttcagctcaatgtgatgtcttcctgggcttcagtcatcaaggtggctcaactgagctggaatctccaagatggcgcttgcaaatggctggctgttgatgctggatgttgattgagagcttggctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggtggctgggcacggtggctcacgcctctaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatggtaaaaccctgtctctactaaaaataaaat-----------------------------------------ttaa---aaaaattagctga-------------------------------------------------------gcatgttggtgcgcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggagg-cagaagttgcagtgagccgagatcacaccact--------gcactccagcctgggtgacagaatgagactctgtc-tcaa------aaataaataaataaat-aaataaataaggcaaaagttgtttgtctctttaaagactaagcctgtaattgacacagtgtctcttcttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628426 1289 - 106955855 ATAAAAAGGCttatagattaaatcatattatatctgaggtttactttaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGagaattctgacttttagctgggcccattggcacccaggtaaaaaa-ctacattcttcaatgttacttacaggtagatgtaaccgtaagtcttcatctaggacaatgatatataag----aatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcatttaactgcctaaaatgtggatgtgatgactgatactctagcgtcatcttggaccatgaagatgag-----gttcaagatggtggggggtgagccagaagtaacttaggtccataatgctttttagagtcattgtaccagccctggactgctcccttcagatttattctacataggggagaaatcagttggtgttagttttaagtcatcattatttagttctctCTTGGAtttaggttatcaattactgtg-taacaaaccaccccaaaactgagtgacttagagtaacaatctt------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagctg-gcggttcttcagctcaatgtgatgtcttcctgggcttcagtcatcagggtggctcaactgagctggattctccaagatggcacttgcaaatggctggctattgatgctggatgttggttgagagttcggctaggactgttgaatgatgtatctgcacatggcctttccatttgattcaaacttcttggaggatagcttctgggtttcaagaggggatgtcataagaaagctttctaaaatagagaaggcagctgggcatggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggtggattacttgaggtcaggagttcaacattagcctggccaacatggtgaaaccctgtctctactaaaaata-----------------------------------------------------aaaattagccgg-------------------------------------------------------gtgtgttggtgcacacctgtaatcccagctactcaggaggccgaggcaggagaattgcttgaacctgggagg-cggaggttgcagtgagctgagatcacaccact--------gcactccagcctgggcgacagaatgagactctgtc-tcaaataaataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916562 1309 + 64156825 ATAAAAAGTCttgtagatgaaatcatattatatctgaggtttactctaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGagaattctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaa---tgtagacagcttccaaaagattctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccgct------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTATAgattacccattactgtg-taacaaaccaccccaaaactgagtgacttagggtaacaatc---------ttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcagttcttcggctcaatgtgatatcttcctgggcttcagtcatcagtggggctcagctgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcagctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcagccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaa------------------------------------------------taaaattagccagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn----------------------tcccagctactcaggaggctgaggcaggagaatcacttgaacctggggggacagaggctgcaatgtgctgagattaagccactgcactccagcactccagcctgagtgacagagcaaga---tgtcttgaa------aaaaaaaaaaaaaagagagagagagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936022 1313 + 59248254 ATAAAAAGTCTTGTAGATGAAAGCATATTATATCTGAGGTTTACTCTAAAATACTCCAGCAGAAAATTTAAAATAGACTTGGGGGAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaa---tgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccgct------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTATAgattaccaattactgtg-taacaaaccaccccaaaactgagtgacttagggtaacaatc--------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcagttcttcggctcaatgtgatatcttcctgggcttcagtcatcagtggggctcaactgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcagctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcagccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaa-----aaaattagccaggcggaaccctgtctctactaaaattaaaaataaaaattagccag-------------------------------------------------------gcatgttggtgcacacctgtaatcccagctactcgggaggccgaggcaggagtattgcttaaacctgggagg-cagaggttgcagtgagccgagataacaccagt--------gcactccagcctgggcaacagaaagagactctgtc-tgga------aaaaaaaaaaaagagagagagagagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46763480 1320 + 50890351 ATAAAAAGTCttgtagatgaaatcatattatatctgaggtttactctaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgcggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccact------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTACAgattatcaattactgtg-taacaaaccaccctaaaactgagtgacttagggtaacaatc--------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggctcaacgtgatatcttcctgggcttcagtcatcagtggggctcaactgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcaactaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggaagtcacaagagagctttctaaaatagagaaggcggccgggcacagtggctcacgcctgtaatcccaacactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaaaaaaaaaaattagccaggcggaaccctgtctctactaaaattaaaaataaaaattagctgg-------------------------------------------------------gcatgttggtgcacacctgtaatcccagctactcgggaggccgaggcaggagtattgcttaaacctgggagg-cagaggttgcagtgagccgagataacaccatt--------gcactccagcctgggcaacagaaagagactctgtc-tgaa------aaaaaaaaaaaaaaaaaag-gagagagagcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e papAnu2.chr19 47051879 1727 + 51301725 I a score=46193.000000 s hg38.chr19_GL949748v2_alt 59605 18 + 1064304 tacagtcttaaggaaagg s panTro4.chr19 58993382 18 + 63644993 tacagtcttaaggaaagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869711 18 + 60714840 tacagtctTAAGGCAAGG i ponAbe2.chr19 C 0 M 200 s nomLeu3.chr10 102629715 18 - 106955855 tacagtcttaaggaaagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59917871 18 + 64156825 tacagtcttaaggaaagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54937335 18 + 59248254 tacagtcttaaggaaagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47053606 18 + 51301725 TACAGTCTTAAGGAAAgg i papAnu2.chr19 I 1727 C 0 s chlSab2.chr6 46764800 18 + 50890351 tacagtcttaaggaaagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=258494.000000 s hg38.chr19_GL949748v2_alt 59623 135 + 1064304 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattggaggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATATATATTtactgagtgcctgagtc s panTro4.chr19 58993400 135 + 63644993 ccagattcaaggggagggaaaataaactctatctttctatagggacagtgacaaagaattggaggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102629733 135 - 106955855 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59917889 135 + 64156825 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i rheMac3.chr19 C 0 I 283 s macFas5.chr19 54937353 135 + 59248254 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47053624 135 + 51301725 ccagattcaaggggagggaaaATAAACTCTACCTCTCTATAGGGACAGTGACAAAGAATTGGGGGCCATCTTTAGTCTGCCATGTGTTACGGTCAATGgaaatagatatatgtatatttactgagtgcctgagTC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46764818 135 + 50890351 ccagattcaaggggagggaaaataaattatacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATATATATTtactgagtgcctgagtc i chlSab2.chr6 C 0 I 1 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55869729 200 + 60714840 M e calJac3.chr22 45331758 716 + 49145316 I a score=14659.000000 s hg38.chr19_GL949748v2_alt 59758 23 + 1064304 ccaccgagagattttaattattt s panTro4.chr19 58993535 23 + 63644993 ccaccgagagattttaattattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102629868 23 - 106955855 ccacccagagattttcatttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937489 23 + 59248254 acccccagagattttaaattttt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47053760 20 + 51301725 ACCCCcagagatttaaaatt--- i papAnu2.chr19 I 1 I 1 s chlSab2.chr6 46764954 20 + 50890351 acccccagagattttaaatt--- i chlSab2.chr6 I 1 I 1 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55869729 200 + 60714840 M e calJac3.chr22 45331758 716 + 49145316 I e rheMac3.chr19 59918024 283 + 64156825 I a score=4658.000000 s hg38.chr19_GL949748v2_alt 59781 7 + 1064304 ttttatt s panTro4.chr19 58993558 7 + 63644993 ttttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869929 7 + 60714840 ttttatt i ponAbe2.chr19 M 200 C 0 s nomLeu3.chr10 102629891 7 - 106955855 atttatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937512 7 + 59248254 ttttttt i macFas5.chr19 C 0 I 278 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e chlSab2.chr6 46764974 1 + 50890351 I e papAnu2.chr19 47053780 1 + 51301725 I e rheMac3.chr19 59918024 283 + 64156825 I a score=-411.000000 s hg38.chr19_GL949748v2_alt 59788 4 + 1064304 tttg s panTro4.chr19 58993565 4 + 63644993 tttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869936 4 + 60714840 tttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102629898 3 - 106955855 tat- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937797 3 + 59248254 ttt- i macFas5.chr19 I 278 C 0 s papAnu2.chr19 47053781 3 + 51301725 ttt- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46764975 3 + 50890351 ttt- i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e rheMac3.chr19 59918024 283 + 64156825 I a score=4745433.000000 s hg38.chr19_GL949748v2_alt 59792 2010 + 1064304 tttttttaagatggaattttgctcttgttgcccaggctgaagtgcaatggcatgatctcagctcactgcaacc-tctgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctcggattacaggcaagtgccaccacacccagttaattttgtattttttagtagagatgggatttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcgagattttaatttttataatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggaaattctaatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcagaccctgaaacatcctgaaaactcctgtatctggagtttttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcttttctttagcaaagacttccctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTTCCCCTATTCTTCATAATCGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAAGTCTAGCAGAGTCTCAGGCTTTAA---TTTTTTTTTTCCGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgattgcaccactgcactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaaTAGGTAAATAAgctgagtgtggtggctcacacctgtaatctcagcactttaggaagccaaggtgggcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat---------aataaataaaTaaacttatggtgaaactgaatccctaatgtggccgtattgataggtcgggcatttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttaagtagcacgctcagctcttttgccctgtgatgccctgtgccacctcggaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatgcagcccctccaccttggactttccaacctccattaactacaggaaataaattccttttctttataagttatctggcttcaagtgttctgttctaagcaacagaatacagactaagacaCAGACACCAATGCATAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACA s panTro4.chr19 58993569 2012 + 63644993 tttttttaagatggaattttgctcctgttgcccaggctgaagtgcaatggcatgatctcagctcaccgcaacc-tctgcctcccgggttcaagcaattctcctgcctcagcctcccaagtagctcggattacaggcaagtgccaccacacccagttaattttgtattttttagtagagataggatttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcgagattttaatttttacaatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggaaattctaatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcagaccctgaaacatcctgaaaactcctgtatctggagtttttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTTCCCCTATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAAGTCTAGCAGAATCTCAGGCTTTAAATTTTTTTTTTTTCTGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgattgcaccactgcactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaatagataaataaGCTCAgtgtggtggctcacacctgtaatctcagcactttaggaagccaaggtgggcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat---------aataaataaataaacttatggtgaaactgaatccctaatgtggccatatggataggtggggcatttaagaggtgatcgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttaagtagcacgctcagctcttttgccctgtgatgccctgtgccacctcggaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatgcagcccctccaccttggactttccaacctcca-taactacaggaaataaattccttttctttataagttatctggtttcaagtgttctgttctaagcaacagaatacagactaagacaCAGACACCAATGCATAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGACCACCAAACGGCACCAAGGTTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTCCTAACGTCTTCGGACTCCTACAAGATTATTTTGTGCAAATTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869940 2013 + 60714840 tttttttaagatggaattttgctcctgttgcccaggctgaagtgcaatggcatgatctcagctcaccgcaacc-tctgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctcggattataagcatgtgccaccacacccggttaattttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccacattggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcAagattttaatttttataatgggtataggatgaggcctgggtgtctcatcgtgtgttttaaatgttcctgggagattctaaggtgcagtcaactttgagaaccactCGGTTGgaacacacaacctccttcccatctcaggcccggaaacatcctgaaaactcctgtatctggagttgttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCAAGTTCTTTAAAAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTCCCCCTATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACAATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAGGTCTAGCAGAGTCTCAGGCTTTAATTTTTTTTTTTTTCCGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaa----ttaaaaattagccaggtgaggtggcacacgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatacagtgaaccgtgattgcaccactgcactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaaTAagctgagtgtggtggctcacacctgtaatctcagcactttgggaggccaaggtgagcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccccgtctctactaaaaatacaaaaattacctgggcatggtggcatgtgcttgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcaagccactgctgtccagcctgggtgacatagcaagacATTGTCtaaaaaaataaataaacaaataaataaataaataaataaataaacttatggtgaaattgaatccctaatgtggccgtattgataggtggggcatttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggaatgagactggtggctttatcagaagaggaagaga----caagtagcacgctcagctcctttgctctgtgatgccctgtgccacctcagaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatacagcccctccaccttggactttccaacctcca-taactacaggaaataagttccttttctttataagttttctggtttcaactgttctgttctaagcaacagaacacagactaagacaCACACACCAATGCACAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGAAACAAAATATTAAGTAAGACCACCAAACGGCACCAAGATTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102629901 1988 - 106955855 tgtttttaagatggagttttgctcttgttgcccaggctgaagtgcaatggcatgatcttagctcacggaaaccttccaccttccaggttcaagcgatcctcctgcctcagcctcccgagtagcttggattacaggcatgtgccaccacacccggttaattttgtattttttagtagagatggggtttctccatgttggtcaggcaggtcttgaactcttgacctcaggtgatacgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccaaccgagattttaatttttataatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggatattctcatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcaggc----------cctgaaaactcctgtatctggagtttttcccccagttttgcttggctaactttgactcttccatcagaaaccagcttcagaatcctttctttagcaaagacttcgctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTCCCCC-ATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGATAAAGTAAGAAGTCTAGCAGAGTCTCAGGCTTTAAA--TTTTTTTTTTCCAATCATAAATGTGGGAGAAAGATAATTTAATCTGCTGCTAAGGTCTG-ATATTTGTTCCCTTGAAAACTCACGTTGAaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgactgcaccactgcactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaataagctgagtgtggtggctcacacttgtaatctcagcactttgggaggccgaggtggacagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactgaaaatacaaaaattacccgggcatggtggcatgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat--------------------aaacttatggtgaaattgaatccctaatgtggctgtattgataggtggggcacttaagaggtgaatgtgtcatgaggactcttttattatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagaattaagtagcacgctcagctccttttccctgtgatgccctgtgccagctcggaaccctccagagagt--------------ccccaacagcaagaagttcctcaccagatgcagtccctccaccatggactttccaacctcca-taactacaggaaataaattccttttctttataagttttctggtttcaagtgttctgttctaagcaacagaatacagactaagacaCACACACCAATGCACAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGATCACCAAACGGCACCAAGGTTTCTCCTTCAAAATAACGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59918307 2001 + 64156825 ttttttttagatggagttttgctcttgttgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccacctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcgcccggctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagcT--gattttaatttttataatgggtacaggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcatgtgccgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcagtccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggctaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAATTTTTTTTTTTTCCGATCATAAATGTGGGATAAAGATAATTTAAACTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctataaataatttaaaaattagccaggtgaggtggcacatgcctgtgatctcagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgacaatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaatataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactacgcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaa----------------------aacttatggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattcatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccttgtgccacctcaggaccctccagagagtcccgagtcttcttgccccaacagcaagaaggccctcaccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacaCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i rheMac3.chr19 I 283 C 0 s macFas5.chr19 54937800 2001 + 59248254 ttttttttagatggagttttgctcttgttgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccacctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcgcccggctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagct--gattttaatttttataatgggtacaggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcatgtgccgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcagtccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggctaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAATTTTTTTTTTTTCCGATCATAAATGTGGGATAAAGATAATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctataaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgacaatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcagttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaa----------------------aacttatggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattcatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccttgtgccacctcaggaccctccagagagtcccgagtcttcttgccccaacagcaagaaggccctcgccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacaCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47053784 2002 + 51301725 ttttttttagatggagttttgctcttgttgcccaggttggagtgcaatggcataatctcagctcaccacaaca-tccacctcccaggctcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcacccagctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggct--gattttaatttttataatgggTACAGGATGAGGCCTAGGTGTCTCATTCTGTGTTTTAAATGTTCCTGGGAGATTCTTATGTGCCgtcaaatttgagaaccactcgGTTGGAACACATAACCTCCTTCCCATCTCAGGCCCTGAAACAA--TGCTATTTCCTGTATCTGGagtttttcccccatttttgCTTGGCTAACTTGGACTCTTCCCTCAGAAACCAGCTTCAGAATCCTTTCTTTAGCAAAGACTTCCCTGCATGTTCTTTAAGAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACgtcttttccccctttcttcaTAATAGTCAAAGTAAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTCATTCTTAAAGTAAGAAGTCTAGCAGAGTCTTgggctttaaa--ttttttttttccgatCATAAATGTGGGATAAAGATAATTTAACCTGCTGCTAAGGTTTAAATATTTGTTCCCTTGAAAACTCATgttgaaccagcctgggcaacatcaggaga-cctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagcTGAcgatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccatctctactaaaactacaaaaattacctgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaat--------------------gaacttaTGGTGAAATtgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggacTCTTTTCTCATGAATGaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccCTGGGAGTGAGACTGGTGGCTTtatcagaagaggaagagagacttgAGTAGCACGCTCAGCTCCTTTGCCCTGTGATGCCCTGTGCCACCTCGGGACCCTCCAGAGAGTCCCGAGTCTTCTTGCCCcaacagcaagaaggccctcaccagatgcagcccctccagcttggacttcccaacctcca-caACTAcaggaaataaattccttttctttacaa-------CGTTTCAAGTATTCTGTTCTAAGCAACGGAATACGGACTAAGACACACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46764978 1993 + 50890351 -tttttttagatagagttttgctcttattgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccgcctcccaggctcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccgcacctggctaatgttgtattttttagtagagatagggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcctggct--gattttaatttttataatgggtataggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcacgtgctgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcaggccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggcaaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTGTCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGAATGGCTCTT-----AGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAA--TTTTTTTTTCCCGATCATAAATGTGGGATAAAGATAATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctacttaggaggctgaagtgggaggatcacctgaacccagaaagctgacgatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaaTAGATACATAAgctgagtgcggtggctcacgcctgtgatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaactggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctggctgacatagcaagatgttgtctcaaaaaatacataaataaaT--------------------Gaacttacggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccctgtgccacctcgggaccctcc--agagtcccgagtcttcttgccccaacagcaagaaggccctcaccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacGCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTGTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=426404.000000 s hg38.chr19_GL949748v2_alt 61802 162 + 1064304 CTTCAAAGCACAGATTTATGGAACCACAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACATAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTAACTTATCAATCCACATTCCATTTTTT----TGTTTGTTT------ s panTro4.chr19 58995581 156 + 63644993 CTTCAAAGCACAGATTTATGGAACCACAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTTCATACTACGCAAGACTATAAAACGCATTTAGAGCCTTTTTAATATTCTCAGTTTATTAACTTATCAATCCACATTCCGGTTTTT----------TTT------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55871953 159 + 60714840 CTTCAAAGGACAGATTTATGGAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTACCTTATCAATCCACATTCTGTTTTTT-----GTt--ttt------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102631889 164 - 106955855 CTTCAAAGGACAGATTTATGGAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTACCTTATCCATCCACATTttgttgttgttgttgtt--gtt------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920308 150 + 64156825 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTGTTACCTTATCAAACCACAttctg----------------ttt------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54939801 150 + 59248254 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTGTTACCTTATCAAACCACAttctg----------------ttt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47055786 150 + 51301725 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACtggctgctgtaataaatatcCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTATTACCTTATCAAACcacattctg----------------ttt------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46766971 150 + 50890351 CTGCAAAGGACAGACTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTGGAGCCTTTTGAATATTCTCAGTTTATTGCCTTATCAAACCACAttctg----------------ttt------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45332474 161 + 49145316 ccCCAAAGGACAGATTTATGGAACCAGAGAATGGAACGCTGGTCGCTGTAATAAATATCCATAGATCTCCATACTACAGAAGA-TATAAAACACATTTAGAGTCTTTTGAATATTCTCAGTTTATGACCTTATCAAACCACAttctgtttttg----------tttttgttt i calJac3.chr22 I 716 I 245 e canFam3.chr1 19564854 888 - 122678785 I a score=328804.000000 s hg38.chr19_GL949748v2_alt 61964 159 + 1064304 GttttgttttgtttttttactttaagttctagggtacatgtgcataatgtacaggtttgatacatgtgccatgttggtttgctccacccatcaagttatcatttacattaggtatttctcctaatgctatccctcccccagccccccaccccacTCTG-t s panTro4.chr19 58995737 159 + 63644993 GttttgttttgtttttttactttaagttctagggtacatgtgcacaatgtacagatttgatacatgtgccatgttggtttgctccacccatcaagttatcatttacattaggtatttctcctaatgctatccctcccccagccccccaccccacTCTG-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872112 155 + 60714840 gt----ttttttttttttactttaagttctagggtacatgtgcacaatgtgcaggtttgatacatgtgccatgttggtttgctgcacccatcaacttatcatttacattaggtatttctcctaatgctatccctcccccagccccccacccATCTCtg-t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632053 156 - 106955855 gttttgttt--tttttttactttaagttccagggtacatgtgcacaatgtgcaggtttgatacatgtgccatgttggtttgctgcacccatcaacttatcatttacattaggtatttctcctaatgctgtccct-ccccagccccccacccccctctg-t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920458 148 + 64156825 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggta-ttctcctaatgctatcccttccccagccccccgccccCCACTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54939951 149 + 59248254 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggtatttctcctaatgctatcccttccccagccccccgccccCCACtg-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47055936 149 + 51301725 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggtatttctcctaatgctatccctcccccagccccccgccccccactg-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767121 150 + 50890351 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctacatccatcaacttatcatttacattagttatttctcctaatgctatccctcccccagccccccgccccCCACtgt- i chlSab2.chr6 C 0 I 52 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=9314.000000 s hg38.chr19_GL949748v2_alt 62123 34 + 1064304 tttt------------------tttttttttgttt---------ttttttttttaagacag s panTro4.chr19 58995896 24 + 63644993 tttt----------------------------tgt---------ttttttttttaagacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872267 52 + 60714840 tttttgtttgtttgtttgtttgtttgttgttgttc---------ttttgtttttaagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632209 26 - 106955855 tttt------------------tt--------ttt---------ttttttttttAAGACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920606 32 + 64156825 ------------------TGTGTGTGTGTGTGTGt---------ttttttttttaagac-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940100 31 + 59248254 ------------------tgtgtgtgtgtgtgtg----------ttttttttttaagac-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056085 41 + 51301725 ------------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttttaagac-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767271 52 + 50890351 I a score=15777.000000 s hg38.chr19_GL949748v2_alt 62157 7 + 1064304 ggtctca s panTro4.chr19 58995920 7 + 63644993 ggtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872319 7 + 60714840 ggtctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632235 7 - 106955855 GGTCTTA i nomLeu3.chr10 C 0 I 340 s rheMac3.chr19 59920638 7 + 64156825 gatctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940131 7 + 59248254 gatctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056126 7 + 51301725 gatctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767323 7 + 50890351 gatctca i chlSab2.chr6 I 52 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=58123.000000 s hg38.chr19_GL949748v2_alt 62164 32 + 1064304 ctgtgtcacccaggttggagtgcagtggtgtg s panTro4.chr19 58995927 32 + 63644993 ctgtgtcacccaggttggagtgcagtggtttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872326 32 + 60714840 ctgtgtcacccaggctggagtgcagtggtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59920645 32 + 64156825 ctctgtcacccaggctggagtgcagtggtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940138 32 + 59248254 ctctgtcacccaggctggagtgcagtggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056133 30 + 51301725 --ctgtcacccaggctggagtgcagtggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767330 32 + 50890351 ctctgtcacccaggctggagtgcagtggtgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e nomLeu3.chr10 102632242 340 - 106955855 I a score=1340866.000000 s hg38.chr19_GL949748v2_alt 62196 589 + 1064304 atctcgactcactgcaacctctgcctctcgggttcaagtgattctcttgccccagc-cctcccaagtacaaggaattacagggttgtgccaccacgccgggctaatttttgtacttttagtagagacagtgttttgccatgttggccagggctggtctcgaacttctgggcccaagtgatccgcctgcctcgacctcccaaagttctgggattacaggtgtgaaccaccatgcctcgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATAtctttttctcctctctcaatgccctctctctctctagctccctctcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATCAATTATAAAGAA------------ttttt--ttttttagat-ggagtctcactctgtcacccaggatggagtgcaatggcacaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccactacgcccggctac-----------ttttttttttttttgtatttttagtagagacggggtt s panTro4.chr19 58995959 600 + 63644993 atctcgactcactgcaacctctgcctctcgggttcaagtgattctcttgccccagc-cctcccaagtaccaggaattacagggttgtgccaccacgcctggctaatttttgtacttttagtagagacagtgttttgccatgttggccagggctggtctcgaacttctgggcccaagtgatccgcctgcctcgacctcccaaagttctgggattacaggtgtgaaccaccatgccTCACCTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCCTCTCTCAATGCCCTCTCTCTCTCTAGCTCCCTCTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATCAATTATAAAGAA------------ttttt--ttttttagat-ggagtctcactctgtcacccaggatggagtgcaatggcacaatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaagcatgtgccactacgcccggctactttttttttttttttttttttttttgtatttttagtagagacggggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872358 594 + 60714840 atctccactctctgcaacctctgcctcttgggttcaagtgattctcctgccccagc-ccccccacgtacgtggaattacagggttgtgccaccacgcctggctaatttttgtacttttagtagagacagcatttcgccatgttgggca-ggctggtctcgaacttctgggcccaagtgatccacctgcctcgacctccgaaagttctgggattataggtgtgaaccaccatgcctcgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCC-CTCTCAATCCCCTCTCTCTCTCTAGCTCCCTTTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTATAAAACTTCTTTTGATTAATTATAAAGAA-----------tttttt--ttttttagat-ggagtcttgctctgtcgcccaggatggagtgcaatggcacaatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggagtgtgccaccacgcccggctaa-----ttttttttttttttttttttgtatttttagtagagatggggtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632582 592 - 106955855 atcttgactctctgcaacctctgcctcttgggttcaagtgattctcctgccccagctccccccaagtacctggaattagagggttgtgcaaccatgcctggctgatttttgtacttttagtagagacagcgttttgccatgttggcca-ggctggtctcgcacttctgggcccaagtgatcccaaacaatcgacctcccaaagttctgggattacaggtgtgaaccaccatgccttgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCCTCTCTCAATCCCCTCTCTCTCCCTAGCTCCCCTTCCTCCCCTACAGCTGCAAAGAAGAAATCTTCTTAATCCATTTCTAAAACTTCTTTTGATTAATTATAAAGAA-----------tttttg--ttttttagat-ggagtcttgctctgtcgcccaggatggagtgcaatggcacaatctcagctcacctcaacctccgcctcctgggttcaagtggttttcccacctcagcctccccagtagctgggactacaggtgcgtgccactacgctcgactac---------ttttttttttttttttgtatttttagtagagacggggtt i nomLeu3.chr10 I 340 C 0 s rheMac3.chr19 59920677 597 + 64156825 atctcaactcactgcaacctctgtctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctgaaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagatcaagtgatccacactcctcagcctcccaaatttctgggattacaggtgtgaaccaccatgcctggccTAAACTACATTCTTGAATTAGTTTTACGGCATGGAATATCTTTTTCTCCTCTCTCAATCCTCTCTCTCTCTCTAGCGCCCTTTCTTCCCTTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAA------ttttttttttt--ttttttagataagagtctccctctgtcacccaggctggagtgcaacggcagaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacacctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i rheMac3.chr19 C 0 I 2 s macFas5.chr19 54940170 602 + 59248254 atctcaactcactgcaacctctgtctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctgaaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccacccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgcctggccTAAACTACATTCTTGAATTAGTTTTACGGCATGGAATAtctttttctcctctctcaatcctctctctctctctagctccctttcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAAttttttttttttttttt--ttttttagat-ggagtctccctctgtcacccaggctggagtgcaacggcaaaatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacacctggcttt---------ttttgtttgtttctttgtattttcagtagcaatggggtt i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47056163 604 + 51301725 atctcaactcactgcaacctctgcctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctggaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccgcccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgccgggcctaaACTACATTCTTGAATTAGTTTtatggcatggaatatctttttctcctctctcaatcctctctctctctctagctcccTTTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATtaattataaagaattttttttttttttttttattttttagat-agagtctccctctgtcacccaggctggagggcaacggcaaaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacccctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46767362 593 + 50890351 atctcgactcactgcaacctctgcctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctggaattacggggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccgcccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgcctggcTTAAACTACATTCTTGAATTAGTTTTACGGCACGGAATAtctttttctcctctctcaatcctctgtctctctctagctccctttcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAA---------tttttttt--ttttttagat-ggagtctccctctgtcacccaggctggagtgcaacggcaaaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacccctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i chlSab2.chr6 C 0 I 2 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=88561.000000 s hg38.chr19_GL949748v2_alt 62785 47 + 1064304 tcaccatgttagccaggatggtctcgatctcctgacctcatgatccg s panTro4.chr19 58996559 47 + 63644993 tcaccatgttagccaggatggtctcgatctcctgacctcatgatccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872952 47 + 60714840 tcaccatgttagccaggatggtctcgatctcctgacttcgtgatccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633174 47 - 106955855 tcaccatgttagccaggatggtctcgatctcctgaccttgtgatccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921276 47 + 64156825 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i rheMac3.chr19 I 2 C 0 s macFas5.chr19 54940774 47 + 59248254 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47056769 47 + 51301725 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i papAnu2.chr19 I 2 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I a score=21831.000000 s hg38.chr19_GL949748v2_alt 62832 39 + 1064304 cccacctcagccttccaaagtgctgggactacaggcgtg s panTro4.chr19 58996606 39 + 63644993 cccacctcagccttccaaagtgctgggactacaggcgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872999 39 + 60714840 cccacctcagcctcccaaagtgctgggattacaggcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633221 39 - 106955855 cccacctcagccttccaaagtgctgggactacaggcgtg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=10660.000000 s hg38.chr19_GL949748v2_alt 62871 60 + 1064304 tgccactacacccggcTACTTTTGTGTGTGTGTGTGtgtgtgtttagtagagacggagtt s panTro4.chr19 58996645 59 + 63644993 tgccactacacccggcTAC-TTTGTGTGTGTGTGTGtgtgtttttagtagagacggagtt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633260 57 - 106955855 tgccactacgccgggcTACCTTT---TTTTTttttttgtatttttagtagagacggggtt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=22801.000000 s hg38.chr19_GL949748v2_alt 62931 47 + 1064304 tcaccatgttagccaagatggtctcgatctccggaccttgtgatcca s panTro4.chr19 58996704 47 + 63644993 tcaccgtgttagccaagatggtctcgatctcctgacctcatgatccg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633317 47 - 106955855 tcaccatgttagccaaggtggtctcgatctcctgacctcgtgatccg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46767957 47 + 50890351 tcaccatgttagccagaatggtcttgatctcctgacctcatgatctg i chlSab2.chr6 I 2 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=69566.000000 s hg38.chr19_GL949748v2_alt 62978 39 + 1064304 cccgcctcagcctcccaaagtgctgggattacaggtgta s panTro4.chr19 58996751 39 + 63644993 cccacctcagcctcccaaagtgccgggattacaggtgta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633364 39 - 106955855 cccgcctcagcctcccaaagtgatgggattacaggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921323 39 + 64156825 cctgcctcagcctcccaaagtgctggtattacaggcgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940821 39 + 59248254 cctgcctcagcctcccaaagtgctggtattacaggcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056816 39 + 51301725 cctgcctcagcctcccaaagtgctggtattacaggcgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768004 39 + 50890351 cctgcctcagcctcccaaagtgctggtattacaggcgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I a score=776036.000000 s hg38.chr19_GL949748v2_alt 63017 321 + 1064304 agccactgtgcccggccAATTATAAATATTTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTCGCTGACAACCATGCAATtgaaacctcctttgcaaaaattacgagagtgagcaaacgatggcagtgaaggagatcggatctggccagcccctaccttgcctttggccctcaaactgcttgtagttattcctgggtttaggctaatctgacttgtctctttgggagaca-tttattttattttct s panTro4.chr19 58996790 321 + 63644993 agccactgtgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAGGTTCAATTTTACTGGCAGAAAGCAAGAAATGGATGAATAGGATGTTTGCTGACAACCATGCCATtgaaacctcctttgcaaaaattacgagagtgagcaaacgatggcagcaaaggagatcggatctggccagcccctaccttgcctttggccctcaaactgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagaca-tttattttattttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873038 321 + 60714840 agacactgtgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACCGGTAGAAAGCAAGAAATGGATGAATAGGATGTTCTCTGACAACCATGCAATtgaaacctcctttgcaaaaattacgagagtgagcaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttggccctcaaacttcctgtagttattcctgggtttaggctaatttgacttgtctctttgggagaca-tttgttttattttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633403 319 - 106955855 agccactgcgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAACAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATAGATGAATAGGATGTTCGCTGACAACCATACAATtgaaacctcctttgcaaaaattac--gagtgagcaaacaatggccgtgaaggagattggatctggccagcccctacgttgcctttggccctcaaagtgcctgtggttattcctgggtttaggctaatctgagttgtctctttgggagaca-tttattttattttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921362 322 + 64156825 agccactgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgcaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttGTCTCTTTGGGAGAtattttattttattttat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940860 322 + 59248254 agccaccgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgcaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagatattttattttattttat i macFas5.chr19 C 0 I 130 s papAnu2.chr19 47056855 322 + 51301725 agccaccgcacctggctaattataaataatttttaaggctaAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCctataaaattcaattttactGGTAGAAAGCAAGAAATGGACGAATAGGATGTTAGCTGACAACCATGCAATTGCAACCTCCTTTGCAAAAACTATGAGAGTAAGAAAACAATGGCAGTGAAGGAGATCGGATCTGGCCAGCCCCTACCTTGCCTTTGACCCTCAAGCTGCCTGTAGTTATTCCTGGGTTTAGGCTAATCTGACTTGTCTCTTtgggagatattttattttattttat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768043 322 + 50890351 agccaccgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGACCTATAAAGTTCAATTTTACTGATAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgtaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctagccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagatattttattttattttat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=6209.000000 s hg38.chr19_GL949748v2_alt 63338 3 + 1064304 ttt s panTro4.chr19 58997111 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873359 3 + 60714840 tgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633722 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921684 3 + 64156825 ttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941312 3 + 59248254 ttt i macFas5.chr19 I 130 C 0 s papAnu2.chr19 47057177 3 + 51301725 ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768365 3 + 50890351 ttt i chlSab2.chr6 C 0 I 249 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=5096.000000 s hg38.chr19_GL949748v2_alt 63341 2 + 1064304 at s panTro4.chr19 58997114 2 + 63644993 at i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873362 2 + 60714840 at i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633725 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921687 2 + 64156825 at i rheMac3.chr19 C 0 I 305 s macFas5.chr19 54941315 2 + 59248254 at i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47057180 2 + 51301725 at i papAnu2.chr19 C 0 I 246 s chlSab2.chr6 46768617 2 + 50890351 at i chlSab2.chr6 I 249 I 1 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=-310.000000 s hg38.chr19_GL949748v2_alt 63343 1 + 1064304 a s panTro4.chr19 58997116 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873364 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633727 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46768619 1 + 50890351 I e papAnu2.chr19 47057182 246 + 51301725 I e macFas5.chr19 54941317 1 + 59248254 I e rheMac3.chr19 59921689 305 + 64156825 I a score=343570.000000 s hg38.chr19_GL949748v2_alt 63344 192 + 1064304 tttccttgagacggagtctcgctctgtagcccgggctggagtgcagtggtgagatctcggttcaccgcaacctctgcatcctagttcaagggattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccatgcccgattaatttttgtatttttagtagagacgaggtttcaccatgt s panTro4.chr19 58997117 192 + 63644993 tttccttgagacggagtctcgctctgtagcccgggctggagtgcagtggtgagatctcggttcaccgcaacctctgcatcctagttcaagcgattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccaagcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873365 192 + 60714840 tttccttgagacggagtctcactctgtagcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtaactggaattacaggtgcctgccaccaagcccaactaatttttgtatttttagtagagatgaggtttcaccatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633728 192 - 106955855 tttccttgagacggagtctcactctgtagcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcttcctagttcaagtgattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccaagcccgactaatttttgtatttttagtagagacaaggtttcaccatgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54941318 192 + 59248254 tttccttgagatggagcctcactctgtagcccaggctggagtgcagtggtgcaatctcagttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtagctggaactacaggtgcctgccaccatgcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47057428 192 + 51301725 tttccttgagatggagcctcactctgtagcccaggctggagtgcagtggtgcaatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtagctggaactacaggtgcctgccaccatgcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i papAnu2.chr19 I 246 C 0 s chlSab2.chr6 46768620 170 + 50890351 tttccttgagatggagcctcactctgtagcccagactggagtgcagtggtgcaatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcc----------------------gtgcctgccaccatgcccgactaatttttgtatttttagtagagacaaggtttcaccatgt i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e rheMac3.chr19 59921689 305 + 64156825 I a score=287599.000000 s hg38.chr19_GL949748v2_alt 63536 122 + 1064304 tggccaggctggtctgaaactcctgacctcaagagatccgcccgccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagaaaggaaaagagaggagaggagagg----- s panTro4.chr19 58997309 122 + 63644993 tggccaggctggtctgaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagagaggaaaagagaggagaggagagg----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873557 123 + 60714840 tggccaggctggtctgaaactcctaatctcaagtgatccgcccgccttggcctcccaaagtgctgggattagaggAAAGaaggaaaggaaaagaaaggaaaggaaaggaaaggaaaggaaagg----- i ponAbe2.chr19 C 0 I 341 s nomLeu3.chr10 102633920 122 - 106955855 tggccaggctggtctgaaactcctgacctcaagtgatccgctcaccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagtaaggaaaagagaggagaggagagg----- i nomLeu3.chr10 C 0 I 5 s rheMac3.chr19 59921994 127 + 64156825 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggAAAGaaggaaagg-aaggtaagaaaaggaaaagaaaggaaaggaaagggaggg i rheMac3.chr19 I 305 C 0 s macFas5.chr19 54941510 127 + 59248254 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattacaggaaagaaggaaagg-aaggtaagaaaaggaaaagaaaggaaaggaaagggaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47057620 127 + 51301725 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aagggaagaaaaggaaaagaaaggaaaggaaagggaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768790 127 + 50890351 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggAAAgaaggaaagg-aagggaagaaaaggaaaagaaaggaaaggaaagggaggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=127964.000000 s hg38.chr19_GL949748v2_alt 63658 172 + 1064304 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaag--------------------------------------------------------------------------------------------------agagaaagaaagaagaaaagagagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------a---aaaat---------------------------------------aaagaaagaagaa---aaaagaaaa-gagaaaaggaagg-----------------------agggagggagggaggcaaggaaggaaggaagca s panTro4.chr19 58997431 180 + 63644993 ggaggggagggg------------aagGgagagaaaggaaaggg--------------------------aagagagaaagaaagaagaaaag--------------------------------------------------------------------------------------------------agagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagt---------------------------------------aaagaaagaagaa---aaaagaaaa-gagaaaaggaagg-----------------------agggagggactgaggcaaggaaggaaggaagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102634047 246 - 106955855 ggaggggagggg------------aagggagagaaaggaaagggtgagaaagggaagagagaaagaagaaaagagagaaagaaagaaggaaagggtgagaaagggaagagataaagagagaaagaagaa-------------------------------------------------------------aagagaaagaaagaaggaaagaaagaaagaaggaaagaaagaaagaaag-------------------------------------------------------------------------------------agagaaaaa---------------------------------------gaggaaggaaggaaggaagagaaaa-gaaaaaagaaagg-----------------------agggagggagggagggaaggaaggaaagaagga i nomLeu3.chr10 I 5 I 8 s rheMac3.chr19 59922121 207 + 64156825 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaaTAGT----------------------------------------------------------------------------------------------GAGAGAAAGAAGAAAAGAGAG------------------------AGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggaa----------------------------------------------------------------------------ggaag-----------------------gaaaggaaaggaaaggaaaggaggaaggaagga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941637 188 + 59248254 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaatagt----------------------------------------------------------------------------------------------gagagaaagaagaaaagagagaaagaaagagaaagaaagaaagaaagag-------------------------------------------------------------------------------------aaagaaag------agaaagagag------------------------aaagagagagaga---gaaagagag-gaaggaaggaaag-----------------------gaaaggaaaggaaaggaaaggaggaaggaagga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47057747 320 + 51301725 ggaggggagggggaggggaggggaaggggagagaaaggaaagga--------------------------aagggagaga-----aagggaatagtgagagaaagaaga---aaagagagaaagaatgagagaaagaagaaaaagagagaaagaaagagagaaagaaggaaagaaagaaagaaagagagagagagagagaaagaaagaaagaaagaaagagaaagaaaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagaaagaaagaaagaaag------------------------aaagaaagaaaaa---gaaagaaaa-gaaagaaagaaagagaaagagaaagagaggaaggaaggaaggaaaggaaaggaaaggaggaaggaagga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768917 272 + 50890351 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaaTAGTGAGagaaagaaga---aaagagagaaagaaaaa-------------------------------------------------------------gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagaaagaaagaaagaaagaaaggaagaaagaaagaaaaaagaaaagagagagaga---gaaagaaagagaaagaaagaaagagagagagaaaaagaggaaggaaggaaggaaaggaaaggaaaggaggaaggaagga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873680 341 + 60714840 I e calJac3.chr22 45332635 245 + 49145316 I a score=75688.000000 s hg38.chr19_GL949748v2_alt 63830 35 + 1064304 agaaagagagaaagagagaaaAGAGGCTCCTTATA s panTro4.chr19 58997611 35 + 63644993 agaaagagagaaagagagaaaAGAGGCTCCTTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874021 35 + 60714840 agaaagaaagaaagggaGAAAAGAGACTCCTTATA i ponAbe2.chr19 I 341 C 0 s nomLeu3.chr10 102634301 35 - 106955855 agaaagaaagaaagggagaaaAcaggctacttata i nomLeu3.chr10 I 8 C 0 s rheMac3.chr19 59922328 35 + 64156825 aggagggaaggaagggagaaaagaGGTTCCTTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941825 35 + 59248254 aggagggaaggaagggagaaaagaGGTTCCTTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058067 35 + 51301725 aggagggaaggaagggagaaaagaggttccttata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769189 35 + 50890351 aggagggaaggaagggagaaAAGAGGTTCCTTATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=402849.000000 s hg38.chr19_GL949748v2_alt 63865 127 + 1064304 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaagtacatatttcttactatatcacggtatcacggg s panTro4.chr19 58997646 127 + 63644993 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaagcacatatttcttactatatcacgatatcacggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874056 127 + 60714840 AAAAACAAAAGACACTCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaaatacgtatttcttactatatcacGATATCACggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634336 127 - 106955855 aataacaaaagacacccttctcaccaaggatttttggaaattccagagtgacggggtgagaagggtgtctttggaaccaaagctgaagaccaaatacatatttcttactatatcacgatatcacggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922363 127 + 64156825 AATAacaaaagacacccttctcaccaagggtttttggaaattccagagtgatggggtgagaagggtgtctttggaaccagagctgaagaccaaatacatatttcttactatatcacgatatcacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941860 127 + 59248254 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccagagctgaagaccaaatacatatttcttactatatcacgatatcacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058102 127 + 51301725 aataacaaaagacacCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTGGAACCAGAGCTGaagaccaaatacatatttcttactATATCACGATATCACAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769224 127 + 50890351 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccagagctgaagatcaaatacatatttcttactatatcacgatatcacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45332880 126 + 49145316 aataACAAAAGACACCCTTCTCA-CGAGGATTTTTGGAATTTCCAGAGTGACGGGGTGAGAAGGGGGTCTTTggaaccagagctgaagaccaaacacgtatttctcactatatcacaatatcgcagg i calJac3.chr22 I 245 C 0 e canFam3.chr1 19564854 888 - 122678785 I a score=763349.000000 s hg38.chr19_GL949748v2_alt 63992 238 + 1064304 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgcgtgga----taag-----------------taccaggtttccagagt-----------------------gccagggcggggctg-cc----cctTGCGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT s panTro4.chr19 58997773 238 + 63644993 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgcgtgga----taag-----------------taccaggtttccagagt-----------------------gccagggcggggctg-cc----cctTGCGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874183 255 + 60714840 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgggtggA----TAAAGCACGCAATCCTTTCCTTTCCAGGTTTCCAGAGT-----------------------GCCAGGGCAGGGCTG-CC----CCTTGGGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634463 238 - 106955855 aggtaaaacgg-ggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcctggaggatcagaagaggtcctgccgagactcagcttagctgtggttcaatcctctgattgcacaga----taag-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACATGATCTTCAGATGGGTCCTG-------------TT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922490 252 + 64156825 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagcttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941987 252 + 59248254 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagcttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058229 252 + 51301725 AGGCAAAAGGGAGGTGCCCTTGAAGcagctcctccccagcccccaatCCTCTTGTGTGCCCGGATGATCAGAAGAGGTCCCGCCAAGACTCAGCTTAGCTGTGGTTCAAGCCTCTGATTGCGTGGA----TAAA-----------------TACCAGGTTTCCAGAGT-----------------------GCCAGGGCAGAGCTGCCC----CCTTGAGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769351 252 + 50890351 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagtttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333006 249 + 49145316 aggtgaaagggagatggcctcgaagcagctcctccacaccccctaatcct---------------gatcggaaga-gtcctgccaagactcagcctagctgtggttcaagcctctgattgcggggatggttaag-----------------taccagatttccagagTCTTTTGAATATTCTCAGTTTATGACCAGCGCAGCGCTGCCC----CCTTGTGGTGGCACTAACTTTGCACAGCTATTT-AAAATAAGCAGTGGACACACCATCTTCAGA-------------GACTGAACAT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19565742 244 - 122678785 aggtgagtgggagatgggctcacagcagctcctcacaaacctcccatccttgcgtgttccagtgggatcataaggcattgtgcccggactcagattagctgcagttcaagcctctgactgtgtagc----catg-----------------tgaagggtttccaggat-----------------------gccatagcagagccCCCCACCACCTTCCCGTGGCATGAACTTTCCATAGTTCTTTAAAAATAAGCAatgggtacaagatctccagaaggatgttg-------------tt i canFam3.chr1 I 888 I 1177 a score=136054.000000 s hg38.chr19_GL949748v2_alt 64230 43 + 1064304 TTACTTCCATATTTTCTCCTAGAGAGAAGAAAAATCATTAAAC s panTro4.chr19 58998011 43 + 63644993 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874438 43 + 60714840 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634701 43 - 106955855 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922742 43 + 64156825 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54942239 43 + 59248254 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47058481 43 + 51301725 TTACTTCCATATTTTCCCctggagagaagaaaaatcattaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769603 43 + 50890351 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333255 40 + 49145316 ---CCTCCATATTTTCCCCAAGAGAGAAGAAAAATCATTAAAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I a score=574939.000000 s hg38.chr19_GL949748v2_alt 64273 344 + 1064304 ttttttttgtttgttttttgtttttttgttttattcgttgttttt-tttttttttttttttttttgagacggagtctcgctc-tgtggcccaggctggagtgcaatggcgtg-tatcagctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacag-------------------------ctttgtatttttagtagagtcggggtttcactatattggccagggtggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggcctactgtat-tttttttttttttttt- s panTro4.chr19 58998054 337 + 63644993 TTTTTTTTGT---TTTTTTGTTTTATTGGT------Gttatttttatttatttatttatttttttgagacggagtctcactc-tgtggcccaggctggagtgcaatggcgtg-tatcagctcactgcaacctccacctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacag-------------------------ctttgtatttttagtagagtcggggtttcactatattggccagggtggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggccTACTGtatatatatatatatttttt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874481 326 + 60714840 TTTTTTCTGTTTGttttttgtttttttgt-----------------tttattggtttttttttttgagacggagtctcgctc-tgtcacccaggctggaatgcaatggcatg-tatcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattactg-------------------------ctttgtatttttagtagagtcggggtttcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttggcctccgaaactgctgggattacaagtatgaaccaccgcacctggccTACTGt---tttttttttttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634744 342 - 106955855 tttttttcgtttgttttttgtttttttgttttattgttttttttgtttttgtttttgttttttttgagacagagtctcgctc-tgtcgcccaggctggagggcaatggcgtgatatcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag-------------------------ctttctatttttagtagagtcgggatttcactatattggcctggctggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggccTACTGtat-----tttttgtttttt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922785 319 + 64156825 ----------------------------------------------Gtttctttttgggtttttttagacagagtctcactc-tgtcgcccaggctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctccggccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcacatttttgcatttttagtagagtcagggattcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttagcctcccaaagtgctgggattataggcatgagccaccgggcctggccTA-------TTTTTGTTTTTGTTTT- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47058524 319 + 51301725 ----------------------------------------------gtttctttttgggtttttttagacagagtctcactc-tgtcgcccagcctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcaaatttttgcatttttagtagagtcagggtttcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattataggcatgagccaccgggcctggccta-------tttttgtttttgtttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769646 319 + 50890351 ----------------------------------------------Gtttctttttgggttttttaagacagagtctcactc-tgtcgcccaggctggagagcaatggtgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactactatgcccagcaaatttttgtatttttagtagagtcggggtttcattatattggccaggctggtctccaactcctgagctcaggtgatctgcctgccttggcctcccaaattgctgggattataggcatgagccaccgggcctggccTA-------TTTTTGTTTTTGTTTT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333295 316 + 49145316 ------------------------------------------------------tttttttttttgagatggaggtttgctcttgtaacccaggctggagcccagagctgcgatctcggctcactgcaacgtccgcctcccaggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcatgcaccaccacaccaagcgaattttttcattcttagtagagatgggatttcactatatcggccaggctggtctcaaactcctgacctt--gtgatccacccaccttggcatcccaaagtgctgagatcacaggcgtgagccacagtgcccggcATCACACA--TTTTTATTCGTTTTTCT i calJac3.chr22 C 0 I 1953 e canFam3.chr1 19565986 1177 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=251456.000000 s hg38.chr19_GL949748v2_alt 64617 135 + 1064304 GAATAGAGAAGGGAgtctcaaactcttggcctcaagccatcctcctgcctcagtttcccaaaatgctgggattat---gagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct s panTro4.chr19 58998391 135 + 63644993 aaataGAGAAGGGAgtctcaaactcttggcctcaagccatcctcctgcctcagcttcccaaaatgctgggattat---gagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874807 137 + 60714840 aaataaaGAAGGGAgtctcaaactcctggcctcaagccatcctcctgcctcagcctcccaaaatgctgggattat-aagagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102635086 137 - 106955855 taatagagaagggagtctcagactcctggcctcaagccatcctcctgcctcagcctcccaaaatgctgggattat-aagagcaagccactgcaccTATCCCACCCCCTCCCACCCTCATTTTTAGAAGGGCACAGGCT i nomLeu3.chr10 C 0 M 1542 s rheMac3.chr19 59923104 138 + 64156825 TAATAGAGAAGGGAgtctcaaactcctggcctcaagctatcctcctccctcagcctcccaaagtgctgggattgttaagagtgagccactgcaccTATCCCACCCCCTCCCACCCTCATTTTTAGAAGGGCACAGGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47058843 138 + 51301725 taatagagaagggagtctcaaactcctggcctcaagctatcctcctgcctcagcctcccaaagtgctgggattgttaagagtgagccactgcacctatcccaccccctcccaccctcattTTTAGAAGGGCACAGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769965 138 + 50890351 TAATAGAGAAGGGAgtctcaaactcctggcctcaagctatcctcctgcctcagcctcccaaagtgctgggattgttaagagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=20340.000000 s hg38.chr19_GL949748v2_alt 64752 17 + 1064304 agagaccatatttccat s panTro4.chr19 58998526 17 + 63644993 agagaccatatttccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874944 17 + 60714840 agagaccatatttcctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59923242 17 + 64156825 AGAGACCATATTTCCAT i rheMac3.chr19 C 0 I 2242 s papAnu2.chr19 47058981 16 + 51301725 AGAGACCATATTTCCA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46770103 17 + 50890351 agagaccatatttccat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=32868.000000 s hg38.chr19_GL949748v2_alt 64769 48 + 1064304 cagtcacttttgcggctagacctgtccatgagactaagttctagccaa s panTro4.chr19 58998543 48 + 63644993 cagtcacttttgcggctagacctggccatgagactaagttctagccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874961 48 + 60714840 cagccacttttacggctagacctggccatgagactaagttctagccaa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47058997 39 + 51301725 ---------TAGTGGCTAGGCCTGGCCATGAGACTAAGTTccaccaca i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46770120 48 + 50890351 cagtcacttttgtggctagacctggccatgagactaagttcCACCACA i chlSab2.chr6 C 0 I 51 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 64817 1 + 1064304 t s panTro4.chr19 58998591 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875009 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059037 1 + 51301725 t i papAnu2.chr19 I 1 I 25 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=9221.000000 s hg38.chr19_GL949748v2_alt 64818 36 + 1064304 gggatgcgataggaagatacatgctcaaattctagg s panTro4.chr19 58998592 36 + 63644993 gggatgcggtaggaagatatatgctcaaattctagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875010 36 + 60714840 gggatgcaataagaagatatatgctcaaattctagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e papAnu2.chr19 47059038 25 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=5469.000000 s hg38.chr19_GL949748v2_alt 64854 21 + 1064304 tcctgctcttaaaAAATAATT- s panTro4.chr19 58998628 21 + 63644993 tcctgctcttaaaaaATAATT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875046 21 + 60714840 tcctgctctaaaaaAATAATT- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059063 22 + 51301725 TCCTAATCTTTATATAAGATCT i papAnu2.chr19 I 25 I 2 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=201974.000000 s hg38.chr19_GL949748v2_alt 64875 267 + 1064304 GTGTGggccgggcgcagtggctcacgcctgtaatcccagtactttgggaggctgaggcaggcggatcac--gaggtcaggaaatcgagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaaatttagccgggtgtggtggtggacgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggc s panTro4.chr19 58998649 266 + 63644993 GTGTGggccgggcgcagtggctcacgcctgtaatcccagtactttgggaggctgaggcaggcggatcac--gaggtcaggaaatcgagaccatcctggataacacggtgaaaccccgtctcgactaaaaatacaaaaaaa-ttagccaggcgtggtggtggacgcctatagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcattgagtcgagatcacgccactgcactccagcctgggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875067 267 + 60714840 GTGTGggccaggcgcggtggttcacacctgtaatcccagtaccttggaaggctgaggggggcggatcac--gaggtcaggagatcgagaccatcctggataacacggtgaaaccccgtctctactgaaaatacaaaaaaaattagccgggcgtggtggtggacgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcagagcttgcagtgagtcgagatcacgccactgcactccagcctgggt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059087 265 + 51301725 gttagggccgggcacagtggcttacgcctgtaatcctagcactttgggaggccgaggcaggtggatcacctgaggtcgggagttcgagaccagcctgatcaacatggagaaaccccgtctctactacaaatacgaaa----ttagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaatcgcttgaacccgggaggcagaggttgtggtgagccgagatcgtgccatggcactccagcctgggc i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46770219 265 + 50890351 GTGAGggccgggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcaagaccagcctgatcaacatggagaaaccctgtctgtactacaaatacaaaa----ttagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaattgcttgaacccgggaggcagaggttgcggtgagccgagatcgtgccattgcactccagcctgggc i chlSab2.chr6 I 51 I 1179 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=11464.000000 s hg38.chr19_GL949748v2_alt 65142 36 + 1064304 -gacagagcaagactccaactcggaaaaaaaaaaaaa s panTro4.chr19 58998915 35 + 63644993 -gacagagcaagactccaactcgg-aaaaaaaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875334 34 + 60714840 -gacagagcgagactccatctcag--aaaaaaaataa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059352 37 + 51301725 aatgagagcaaaactctgtctcaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 I 1323 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=273.000000 s hg38.chr19_GL949748v2_alt 65178 1 + 1064304 t s panTro4.chr19 58998950 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875368 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=58931.000000 s hg38.chr19_GL949748v2_alt 65179 177 + 1064304 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCTCTTTCTT--------GGGGCTCAGAACCAGAAATTAAAGCTACATGTTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGTTAAGTGAGAGAGAGGTACATTTATATCTAGTTTTTTT s panTro4.chr19 58998951 173 + 63644993 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCACTTTCTT--------GGGGCTCAGAACCAAAAATTAAAACTACATGTTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGT----TGAGAGAGAGGTACATTTATATCTAGTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875369 177 + 60714840 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCACTTTCTT--------GGGGCTCAGAACCAGAAATTAAAGCTACATATTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGTTAAGTGAGAGAGAGGTACATTTATATCTAGTTTTTTT i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19567163 172 - 122678785 aatgattgttt----ctctctgtctctgtctttctctcttcctcctttcatgctgcctCAGAACCACACCGGAAAACTGCATGTTGACAAGAGCAAAGCTGTT-----------GGTAAACAGTCCCAGACTGTTTCAACTATATACTGTGAAGTGAAAGAGACATAAAATCATAATAGGTTTTTTT i canFam3.chr1 I 1177 I 8 e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=86474.000000 s hg38.chr19_GL949748v2_alt 65356 335 + 1064304 CCGGTGGTGAAGGAGATtctttttttctctctctctctcttttttatgagatggagcttggctcttgttgcccaggctggagtgcaatggcacgacctcggctcagtgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacagggtttcaccatgttaatcaggctgctctcgaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctaggattacaggtgtgcgccactgcacctggccGGGAGA s panTro4.chr19 58999124 334 + 63644993 CCGGTGGTGAAGGAGAttc-ttttttctctctctctctcttttttattagatggaggttggctcttgttgcccaggctggagtgcaatggcacgaccttggctcactgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacggggtttcaccatgttaatcaggctgctctcgaactcctaacctcaggtgatccacctgccttggcctcccaaagtgctaggattacaggtgtgcgccactgcacctggccGGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875546 327 + 60714840 CCGGTGGTAAGGGAGAttc-tttttt-------tctctcttctttatgagatggagcttggctcttgttgcccaggctggagtgcaatggtatgacctccactcactgaaacctccgcctcccaggttcaagtgattctcctgcctcagccccctgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacggagtttcaccatgttagtcaggctgctctcgaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgctaggattacaggtgtgtgccactgcacctggccGGGAGA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19567335 8 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=102014.000000 s hg38.chr19_GL949748v2_alt 65691 286 + 1064304 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCAATACACTATGCAGTGATTTGGTTAATACTTt-----gtgagttccatgagtgcagggtttatgtctgctattgctccccactggaccgccggactctagcacaatg---ccatgcacggtagacattgaatacatgagtgatacgaggatgaat-GAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcacagtgactcactcctggaatcccagcactttgggaggccaaggaaggaggatggcttgaggccagg s panTro4.chr19 58999458 286 + 63644993 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCAATACACTATGCAGTGATTTGGTTAATACTTt-----gtgagttccatgagcgcagggtttacgtctgctattgctccccattggaccgccggactctagcacaatg---ccatgcacggtagacattgaatacatgagtgatacgaggatgaat-CAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcgcagtgactcactcctggaatcccagcactttgggaggccaaggaaggaggatggcttgaggccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875873 286 + 60714840 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCGATACACTATGCGGTGATTTGGTTAATACTTt-----gtgagttccgtgagtgcagggtttacgtctgctattgctccccattggaccgccggactctagcacaatg---ccatgcacagtagacattgaatacatgagtgatacgtggatgaat-GAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcgcagtgactcactcctggaatcccagcactttgggaggccaaggagggaggatggcttgaggccagg i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19567343 289 - 122678785 TCTTTTTTTACATCAGCTCAAAGTGCTCCCTCATCAATACAGTGAGTAGCAATTTGGTTAATGCTTTTCTCAGCGagcatcatgagattagggtttatgcctgctgtcattccccgcttgtccccagcac-ccagcacagtgcccccccacatggagggcattgaaaaaatgtgtgccaagtggatgaatGGGGACCTGGGGGAAGCAAGATTGGGGACCGAAGTGTAAGTCCTAAG--------GGTGAA-CATACCTGGGTT--------TGTGGGAA---AAGGAAAGAGGTCTCATTGAAGCTAAG i canFam3.chr1 I 8 I 2288 e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=56804.000000 s hg38.chr19_GL949748v2_alt 65977 214 + 1064304 cattcaagaccagcctggacaacatggtgagatcccatagctataaaaagtaaacaattagccgggcgcggtggctcacgcctgtaattccagcactttgggaggccgaggggggtggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcatggtggtggcaca s panTro4.chr19 58999744 212 + 63644993 cattcaagaacagcctggacaacatggtgagaccccatagctataaaaaataaacaattagctgggcgcggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcgtgttggtgg--ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55876159 212 + 60714840 cattcaagaccagcttggacaacatggtgagaccccatagctataaaaaataaacaattagccgggtgcggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcgtggtggtgg--ca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=744930.000000 s hg38.chr19_GL949748v2_alt 66191 1475 + 1064304 cgcctgtaatcccagcgactcgggagggcgaggcaggagaatcacttgaacccaagaggcggaggttgcagtgagccgagatcgcgtcattgcactacagcctggcaacagagcgagactccatctc-aa----------------aaaaaaaataataataatagtaataataaattggccaggcgtggtgatggcagtgttgtcattgctttaagaggcaggaacagggggaAAAGACCCAGCAGTCTAACCACACAGACAAGTCCCAAGTTAGGCACTTCTGTGTGTCTTGGGGGCTGTT------GATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTATGAAAAGATGTTCAGTGGTAGAAAATGAAATAAGCATTGTGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCAgctgggtgcggtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggatcactttaggtcaagcgttcgagaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagccgggcatggtggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaacccgggaggtggagattgtagtgagctgagatcacaacactgcactccaacctgggaaacagagcaagactccatctcaaaaagaaaaaaaaTCTCAAGCTTATTGgatagataaatgcacaggtagatagatggatattgaatgaataaatagttcagtggattaaaa----actggttaatgaagaaatggatggg-taaatggatggaaatatgaatgaatgcatgatggataaggacaaatga---aatagacaaatgtacaaatgaaagcaaaggaaaaagagatgctcaatagaaatgaataaggatgagaatcaatgctagacatgaatgagtgaatggtgaatgaaggagtgattgaatggatgaatACATGGAGTTAAGTTGAAGTACAAACTCGGCCAAGACTTCTTTTTCTCTGCTTTGGGTGGAAATACATTTTTAAAAAAAGAGggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagtttgggagttcgaggccagcctgaccaacacagagaaaccctgtttctactcaaaatacaaaattagccaggtgtggtggctcacacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgtggtgagccgagatggcgccattgcactccagcctgggcaacaagagcgaaagtccacctcaaaaaaaata-----aaataa----aataaaataaaataaaaaaagagggaaaaagg--aaaaaaaaagaCtccctgatgtgccactgacttcctgtacatgtttagg s panTro4.chr19 58999956 1488 + 63644993 cgcctgtaatcccagcgactcgggaggccgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcgcgtcattgcactacagcctggcaacagagcgagactccatctcaaa----------------aaaaaaaataataataatagtaataataaATTGGCCAGGCGTGGTGATGGCAGTGTTGTCATTGTTTTAAGAGGCAGGAACAGGGGGAAAAGACCCAGCAGTCTAACCACACAGACAAGTCCCAAGTTAGGCACTTCTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTATGAAAAGATGTTCAGTGGTAGAAAGTGAAATAAGCATTATGACTACATCTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCggctgggtgcggtggctcacgcttgtaatcccagctctttaaagggagaccaaggtgggcagatggatcactttaggtcaagcgttcgagaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagccgggcatggtggcaggtgcctgtaatcccagctacttggcagcctgaggcaggagaatcgtttgaacccgggaggtggagattgtagtgagctgagatcacaacactgcactccaacctgggaaacagagcaagactccatctcaaaaagaaaaaaaaTCTCAAGCTTATtggatagataaatgcacaggtagatagatggatattgaatgaataaatagttcagtggattaaaa----actggttaatgaagaaatggatggg-taaatggatggaaatatgaatgaatgcatgatggataaggacaaatga---aatagacaaatgtacaaatgaaAGCAAAGGAAAAAGAGATGCTCAATAGAAATGAATAAGGATGAGAATCAATGCTAGACatgaatgagtgaatggtgaatgaaggagtgattgaatggatgaatACATGGAGTTAAGTTGAAGTACAAACTCGGCCAAGACTTCTTTTCCTCTGCTTTCGGTGGAAATACGTTTTTAAAAAAAGAGggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagtttgggagttcgaggccagcctgaccaacacagagaaaccctgtttctactcaaaatacaaaattagccaggtgtggtggctcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcggtgagcggagatggcgccattgcactccagcctgggcaacaagagcgaaagtccgcctcaaaaaaaaaaaaaataaataa----aataaaataaaataaaaaaagagggaaaaagg-aaaaaaaaaagaCtccctgatgtgccactgacttcctgtacacgtttagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55876371 1477 + 60714840 cgcctgtaatcccagtgactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctggcaacagagtgagactccatctc-----------------------aaaataataataataataataataaattggccaggcgtggtgATGGCAGTGTTGTCATTGTTTTAAGAGGCAGGAACAGGGGGAAAAGACCCAGCAGTCTAAGCACACAGACAAGTCCCAAGTTAGGCACTTGTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATGACCTATGTGGATCACCCAGCAAGATGACCAGTATGAAAAGGTGTTCAGTGGTAGAAAGTGAAATTAGCATTATGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCagctgggtgcggtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggattacttgagttcaggggttcgaaaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagctgggcatggtggcgggtgactgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaacctgggaggtggagattgtagtgagccgagatcacaacactgcactccaacctgggaaacagagcgagactccatctcaaaaag-aaaaaaaTCTCAAGGTTATtggatagataaatgcataggtagattgacggatattgaatgaataaatagttgagtggattaaaaactgactggttaatgaagagatggatgggttaaatggatggaaatatgaatgaatgaatgatggataaagacaaatga---aatagacaaatgtacaaatgaaAGCAAAGGAAAAAGAGATGCTCAATAGA----AATAAGGATGAGAATCAACGCTAGACatgaatgagtgaacggtgaatgaaggagtgattgactggatgaatACACAGAGTCAAGTTGAAGTACAAACTCGGCCAAGACTCCTTTTTCTTCGCTTTGGGTGGAAATAAGTTTTTAAAAAAAGAGggctgggcacggtggctcacgcctgtaatcccagccctttgggaggccgaggcgggtggatcacctgagtttgggagttcgaggccagcctgaccaacatggagaaaccccgtttctactcaaaatacaaaattagccaggagtggtggcgcacgcctgtaatcccagctactcaggaggctgagccaggagaatcacttgaacctgggaggcagaggtcgcggtgagccgagatcgcgccattgcactccagcctgggcaacaagagcgaaactccgcctc-aaaaaaata-----taataatattaataaaataaaataaaaaAAGAGAGAAAAAGA-AAAAAAAAAAGACT-CCTGATGTG-CACTGACTTCCTGTACACATTTAGG i ponAbe2.chr19 C 0 I 762 s nomLeu3.chr10 102636777 1497 - 106955855 cgcctgttatcccagcgactcaggaggatgaggcaggagaattgcttgaactcaggaggcagaggttgcagtgagacgagttcgcgccattgcactacagcctggcaacagagcgagactccatctcaaataataataataataataataataataataataataataataataaATTTGCCAGGCGTGGTGGTGGCAGTGTTGTCATTGTTTTAAGAGGCACGAACAGGGGGAAAAGACCCAGCAGTCTAACCACACAGACGAGTCCCAAGTTAGGCACTTGTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTGTGAAAAGGTGTTCAGTGGTAGAAAGTGAAATTAGCATTATGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCggctgggtgcagtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggatcacttgaggtcaggggttcgagaacagcctggccaacatggtgaaaccccatctctgctaaaaacacaaaattagccaggcatggtggcgggtgcctgtaatcccagctacttgggaggctgaggcaggagaattgtttgaacccaggaggtggagattgtagtgagccgagatcacagcactgcactccaacctgggaaacagagcgagactccacctcaaaaag-aaaaaaaTCTCAAGGTTATTGGATAGATAAATGCATAGGTAGATTGACGGACATTGAATGAATAAATAGTTGAGTGGATTAAAAACTGACTGGTTAATGAAGAGATGGATGGG-TAAATGGATAGAAATATGAATGAATGAATGATGGATAAGGACAAGTGAAATAATAGACAAATGTACAAATGAAAGCAAAGGAAAAAGAGATGCTCAATAGAAATAAATAAGGATGAGAATCAACGCTAGACATGAATGAGTGAATGGTGAATGAAGGAGTGATTGAATGGAGGAATACATGGAGTCAAGTTGAAGTACAAACTCGGCCAACACTACTTTTTCTTTGCTTTGGGTGGAAATAAGTTTAAAAAAAAAGAGggccgggcacggtgactcacgcctgtaatcccagcagtttgggagactgaggcgggtggatcacctgagtttgggagttcgaggccagcctgaccaacatggagaaaccccgtttctactcaaaatacaaaattagccaggagtggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaagcagaggtcatggtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaattccgtctcaaaaataata-------ataa-----------taaaataaaaaaagaGGGAAAAAGGAAAAAAAAAAAGACtccctgatgtgccactgacttcctctacacatttagg i nomLeu3.chr10 M 1542 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=104626.000000 s hg38.chr19_GL949748v2_alt 67666 415 + 1064304 taaacttaatatcacctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaggtctgGTGCCTTCCTTATAACCTGCGTCTCTTCtttattctttttttttttttttttttttttgagacggagttttgctctgtcacccaggctggagtgtgcagtgatgcaatctcggctcactacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttgtccaggctggtctcgaacttctgacttcgtgatccacctgcctcggcctcccaaagtgctaggatcacaggtgtgag s panTro4.chr19 59001444 407 + 63644993 taaacttaatatcacctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaggtctgGTGCCTTCCTTATAACCTGCGtctcttctttattc--------tttttttttttttttgagacggagtttcgctctgtcacccagactggagtgtgcagtgacgcgatctcggctcactacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttgtccaggctggtctcgaacttctgacttcgtgatccgcctgcctcggcctcccaaagtgctaggatcacaggtgtgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102638274 410 - 106955855 gaaacttaatatcgcctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaagtctgGTTCCTTCCTTATAACCTGGGTCTCTTCtttattc-tttttgtttttgtttttgttttgagacggagtttcg--ctgtcacccaggctgga--gtgcagtggtgcgatctcggctcactgcaatgtctgcctcctgggttcaagcaattatcctgcctcagcctcccgagtagctaggattacaggcacccgccaccacgcccggctaatttttgtatttttagtagacacggggtttcaccatgttggccaggctggtctcgaacttctgacttcgtgacccgcctgcctctgcctcccaaagtgctaggatcacaggtgtgag i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e ponAbe2.chr19 55877848 762 + 60714840 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=19940.000000 s hg38.chr19_GL949748v2_alt 68081 39 + 1064304 ccagcacccccggcTTATTCCTTTTTTAAAATTGTTATT s panTro4.chr19 59001851 39 + 63644993 ccagcacccccggcTTATTCCTTTTTTAAAATTGTTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878610 39 + 60714840 CCAGCACCCCCGGCCTATTCCTTTTTTAGAATTATTATT i ponAbe2.chr19 I 762 C 0 s nomLeu3.chr10 102638684 39 - 106955855 ccagcacccccagtcTATTCCTTTTTTAAAATTATTATT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=102233.000000 s hg38.chr19_GL949748v2_alt 68120 163 + 1064304 ATTTCCCACAGCCACATA----TGCCGGGGAGGTTGTCCCACATATGTTCTACCAAGGCCC--CTCTGGCACTGAGATCAAACCCCGGAAGACCCGCTC---AGTCTCTCCTCCCGTCTTTTCAAC--ACGTTAGCGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTCT s panTro4.chr19 59001890 163 + 63644993 ATTTCCCACAGCCACATA----TGCCAGGGAGGTTGTCCCACATATGTTCTACCAAGGCCC--CTCTGGCACTGAGATCAAACCCCGGAAGACCCGCTC---AGTCTCTCCTCCCGTCTTTTCAAC--ACGTTAGCGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878649 165 + 60714840 ATTTCCCACAGCCACAAA----TGACAGGGAGGTTGTCCTGGATATGTTCTACCAAGGCCCGACGTTGGTACTGAGATCAAAGCCCAGAAGACCCGCTC---AGTCTCTCCTCCCATCTTTTCAAC--ACGTTAGTGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638723 165 - 106955855 ATTTCCCACAGCCACTTA----TGCCAGGGAGGTTGTCCCGGATATATTCTACCAAGGCCCCACGCTGCTACTGAGGACAAACCCCGGAAGACCCGTTC---AGTCTCTCCTCCCATCTTTTCAAC--ACGTCAGCGCCCCCACGTGGCTAATTAGACTTCAAAA-TTCAGTTCT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19569920 174 - 122678785 ACTTCCGATATCCACACACAGTTCACAGAGAGATTGCCCAGGACATGCTCCACAGGAGTCCC-CACTGGTACTAAGTGCAAACCCAGAAAGTCCTGCTTGGAAGTCCCTCCTCTTGTCTCTTCAGCAAAAGTCAATGAACCCAGGTGGCTACTTTGATTCCAAAATTTCAGTGCT i canFam3.chr1 I 2288 I 1432 e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 68283 1 + 1064304 T s panTro4.chr19 59002053 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878814 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638888 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=80258.000000 s hg38.chr19_GL949748v2_alt 68284 108 + 1064304 gaggcgggcggatcacttgaggtcaggagttcaagaccagtctggtcaacatggtgaaaccccgtctctactaaaaatac---aaacattagccggacatggtggtacgca s panTro4.chr19 59002054 108 + 63644993 gaggtgggcggatcacttgaggtcaggagttcaagaccagtctggtcaacatggcgaaaccccgtctctactaaaaatac---aaacattagccggacatggtggtacgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878815 108 + 60714840 gaggcgggcggatcacctgaggtcaggagttcaagaccagtctggccaacatggcgaaaccccctctctactaaaaatac---aaacattagccagacatggtgttacgca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638889 108 - 106955855 gaggcgggcggatcacctgaggtcaggagttcaagaccagtctggccaacgtggcgaaaccccgtctctactaaaaatac---aaacattagccagacatggtggcatgca i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47060712 108 + 51301725 gagacgggcggatcac--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaaatacaaaaaactagccgggcgaggtggcg-gcg i papAnu2.chr19 I 1323 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=101500.000000 s hg38.chr19_GL949748v2_alt 68392 100 + 1064304 cctgtaatcccagctattcgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------cca-cctggccaatttggcaaaactccatctctactaa s panTro4.chr19 59002162 101 + 63644993 cctgtaatcccagctattcgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878923 101 + 60714840 cctgtaatcccagctattcggaaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638997 101 - 106955855 cctgtaatcccagctatttgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47060820 132 + 51301725 cctgtagtcccagctacccgggaggctgaggcaggagaatggcgtaaacccgggaggcggagcttgcagtgagctgagatccggccactgcattccagcctgggcgacagagcgagactccgtctcaaaaaa i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 46771663 101 + 50890351 cctgtaatcccagcactttgggaggctgaggccgatggatcacttgaggtcaggag----------------tttgaga---------------ccaccctggccaatatggctaaactccatctctattaa i chlSab2.chr6 I 1179 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=195938.000000 s hg38.chr19_GL949748v2_alt 68492 108 + 1064304 aaatacaaaaattagctgggcgtgat-agcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcggatgttgcagtgaac s panTro4.chr19 59002263 108 + 63644993 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcggatgttgcagtgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879024 108 + 60714840 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcagaggttgcagtgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639098 108 - 106955855 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggaggctgaggcacgagaatcatttgaacccaggaggcggagattgcagtgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59925501 108 + 64156825 aaatacaaaacttagctgggcgtggt-ggtgtacacctgtaatcccagctactcaggaggctgaggcacgagaatcacttgaacccaggaggcggaggttgcagtgaac i rheMac3.chr19 I 2242 C 0 s papAnu2.chr19 47060969 108 + 51301725 aaatacaaaacttagctgggcgtggt-ggtgcacacccgtaatcccagctactcaggaggctgaggcacgagaatcacttgtacccgggatgtggaggttgcagtgaac i papAnu2.chr19 I 17 C 0 s chlSab2.chr6 46771764 109 + 50890351 aaatacaaaacttagctgggcgtggtgggtgcacacctgtaatcccagctactcaggaggctgaggcacgagaatcacttgaacccaggaggcggaggttgcagtgaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=660226.000000 s hg38.chr19_GL949748v2_alt 68600 325 + 1064304 cgagatcacgccactgcactccagcctgggtg---gagtgagatcttctctc-aaaaaaaaaaaagaaagaaag------------aaagaaaaagtcgtgcttgatTATGCTTGA-TGGCAAAAAGGTGAGACCTTCCTTTCGGCACTGAGTCTGGTAGAAATCGGTGTTACAGGGtagctaacatttattgaacacttactacgggccagttactgctttaaatgttttatgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaagagagAGTTGGGGAAGGGCGCTTTCTGAATGCT s panTro4.chr19 59002371 332 + 63644993 cgagaccacgccactgcactccagcctgggtg---gagtgagatcttctctcaaaaaaaaaaaaagaaagaaagaa------agaaaaAGAAAAAGTCGTGCTTGATTATGCTTGA-TGGCAAAAAGGTGAGACCTTCCTTTCGGCACTGTGTCTGGTAGAAATCGGTGTTACAGGGtagctaatatttattgaacacttactacgggccagttactgctttaaatgttttatgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtccgggcaagagagagctggggaaggGCGCTTTCCGAATGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879132 335 + 60714840 cgagatcgtgccactgcactccagcctgggtg---gagtgagatcttctctcaaaaaaaaaaaaaaaagaaaagaaaa---gaaaGAAAGAAAAAGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCCTTTCGGCACTGAGTCTGGTAGAAATCGGTGTTACAGGGtagctaacatttattgagcacttactacgggccagttactgttttaaatgttttgtgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaagagagagttggggaagGGCGCTTTCTGAATGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639206 327 - 106955855 cgaaatggcgccactgcactccagcctgagtg---gagtgaaatcttctctcaaaaaaaaaaaaaaaaggaaag--------aaagaaaaAAAAAGTTGTGCTTGATCATGCTTGA-TGGAAAAAAGGTGAGACCTTCCTTTCGACACTGAGTCTGGTAGAAATCGGTGTTACAGGGtaactaacgtttattgagcact---tacgagccagtcactgttttaaatattttatgtgtattacccactggatcctacaacagtcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaaGACAGAGTTGGGGAAGGgtgctttctgaatgct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59925609 314 + 64156825 cgagatcgtgccactgccctccagcctgggtgatagagtgagatcttctctc--------------------------caaaaaaaaaaaaaaaaGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCGGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGtagctcacattcattgagcacttactacgggccagttactgttttaaatgttttatatgtattacccactgaatcctacaacaatcctatgaaatggcttttatcagtgcatccatttcacCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061077 311 + 51301725 cgagatcgtaccactgcactccagcctgggtgatggagtgagatcttctctc-----------------------------aaaaaaaaaaaaaagttgtgcttGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCGGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGTAGCTcacattcattgagcacttactacGGGCCAGttactgttttaaatgttttatatgtattaccCACTGAATCCtacaacaatcctatgaaatGGGTTTTATCAGTGCATCCATTTCACCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46771873 340 + 50890351 cgagattgcgccactgcactccagcctgggtgatggagtgagatcttctctcaaaaaaaacaaaacaacaacaaaaaaaaaaaaaaaaaaaaaaaGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCAGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGtagctcacattcgttgagcacttactacgggccagttactgttttaaatgttttatgtgtgttatgcactgaatcctacaacaatcctatgaaatgggttttatcagtgcatccatttcacCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45335564 302 + 49145316 caagattgaaccactgcactccagcctgggcgacagagtgagactttc-------------------------------------aaaaaaaaaaaTTGTGTTTGATTATGCTTAATTTAAAAAAAGGTGAGACCTTCCTTTCG---CTGAGTCTGGTAGAAATCGGTGTTATAGGatagctaacattcactgagaatttactgcaagccagttactgttttaagtgttggatgtgtgttacccactgaatcctacaacaattctatgaagtaggttttatcagtgcgtccatattaccgtcaaggcaagagagagttggggaagggcactttccgaatgct i calJac3.chr22 I 1953 I 5 e canFam3.chr1 19570094 1432 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=427330.000000 s hg38.chr19_GL949748v2_alt 68925 310 + 1064304 GCTACcgtgtccagagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtggtgagtgttacagcgcttaaagatggcacggacctaaagagttagcagcagcaagatttattgtgtagagcaagagaacaaagctcccacagcgtggaagcagactctggtggggtgccgc-gctcgccagcttttattccctta-ttgtccccgcccatgtcctgctgattggtccattttacagagc------------------------gctgattggtccatcttacagagtgctgattggtccattttaca s panTro4.chr19 59002703 334 + 63644993 GCTACcgtgtccagagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtggtgagtgttacagcgcttaaagatggcacggacctaaagggttagcagcagcaagatttattgtgtagagcaagagaacacagctcccacagcgtggaagcggactctggtggggtgccgc-gctggccagcgtttattccctta-ttgtccccgcctatgtcctgctgattggtccattttacagagcactgattggtccatcttacagagtgctgattggtccattttacagagtgctgattggtccattttaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879467 305 + 60714840 GCTACtgtgtgcggagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtg----gtgttacagcacttaaagatggcacggacctaaagagtttgcagcagcaagatttattgtgtagagcaagagaacaaagcttccacagcgtggaagggaactctggtgcggtgccgc-gctggctagcttttatt-cctta-ttctccccatccatgtcctgctgattggtccattttacagagc------------------------gctgattggtccatcttacagagtgcagattggtccattttaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639533 310 - 106955855 gctactgtatctggagttggttccttcctgtgggtttgaggtctcgctgactttaagaatggagccacggaccttcgtggtgagtgttacagcacttaaagatagcacacacctaaagagttggcagcagcaagatttattgtgtagagcaagagaacaaagcttccacagtgtggaagaggactctagcagggtgccgc-gccggctagcttttattccctta-ttgtccccgcccatatcctgctgattggtccattttacagagc------------------------gctgattggcccatcttacagagtactgattggtccattttaca i nomLeu3.chr10 C 0 I 1535 s rheMac3.chr19 59925923 263 + 64156825 GCCACcgcgtccggagttggttccttccagtgggtttgtggtctagctgacttcaagaatgcagccccagaccttcgcggtgagtgtcacagctcttaaagatggcatggaccc-aagagtgagcagcagcaaaatttattgtgaagagcaagagaacacagcttccacagcctggaaggggacccgagcagggtgccaatgctggctagcttttattcccttatttgtccccgcccatgtcct------------------------------------------------gctgattggtccattttaca------------------------ i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061388 287 + 51301725 GCCACCGCCTCgggagttggttccttccagtgggtttgtggtctggctgacttcaagaatgcagccgcagaccttcgcggtgagtgtcacagctcttaaagatggcatggaccc-aagagtgagcagcagcaaaatttattgtgaagagcaagaGAACACAGCTTCCACAGcctggaaggggacccaagcaggttgccgctgctggctagtttttattcccttatttgtccccgcccatgtcctgctgattggtccactttacagagc------------------------gctgattggtccattttaca------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772213 287 + 50890351 GCCACcgcgtccggagttggtt-cttccagtgggtttgtggtccggctgccttcaagaatgcagccgcagaccttcgcggtgagtgtcacagctcttaaagatggcatggacccaaagagtgagcagcagcaaaatttattgtgaagagcaagagaacacagcttccacagactggaaggggacccaagcaggttgccgctgctggctagtttttattcccttatttgtccccgcccatgtcctgctgactggtccactttacagagc------------------------gctgattggtccattttaca------------------------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=158443.000000 s hg38.chr19_GL949748v2_alt 69235 92 + 1064304 atcctcttgtaagacagaaaagttctccaggtccccattcaacccaggaagtccagctggcttcacgtctcaCTACTACCTTTCTGTAGCTG s panTro4.chr19 59003037 92 + 63644993 atcctcttgtaagacagaaaagttctccaggtccccattcaacccaggaagtccagctggcttcacgtctcaCTACTACCTTTCTGTAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879772 92 + 60714840 atcctcttgtaagacagaaaagttctccaagtccccattcaacccagaaagtccagctggcttgacgtctcaCTACTACCTTTCTGTAGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641378 88 - 106955855 atcctcttgta----agaaaagttctccaagtccccattcaacccaggaagtccagctggcttcacctctcaCTACTACCTTTCTGTAGCTG i nomLeu3.chr10 I 1535 C 0 s rheMac3.chr19 59926186 92 + 64156825 atcctcttgtaagacagaaaagttctccaagcctccactcgatccaggaggtccagctggcttcccctctcaCTGCTACCTCTCTGTAGCTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061675 92 + 51301725 atcctcttgtaagacagaaaagttctccaagctTCCACTCGACCCAGGAGGTCCAGCTGGCTTCCCCTCTCACTGCTACCTCTCTGTAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772500 92 + 50890351 atcctcttgtaagacagaaaagttctccaagcctccactcgacccaggaggtccagctggcttcccctctcaCTGCTACCTCTCTGTAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=21685.000000 s hg38.chr19_GL949748v2_alt 69327 13 + 1064304 CTACTACT---acagt s panTro4.chr19 59003129 13 + 63644993 CTACTACT---acagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879864 13 + 60714840 CTACTATT---acagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641466 13 - 106955855 CTACTACT---acagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926278 16 + 64156825 CTACTACTACcacagt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061767 16 + 51301725 CTACTACTACCACAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772592 16 + 50890351 CTACTACTACcacagt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19571526 13 - 122678785 ctaatatc---ccagc i canFam3.chr1 I 1432 C 0 e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=300960.000000 s hg38.chr19_GL949748v2_alt 69340 123 + 1064304 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactaATCGCGTCTTCCTTTCAGCTACTCCTTGGGAAAGGCCTGGAAAGAAGCTACAGCACAGGGC s panTro4.chr19 59003142 123 + 63644993 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCGCGTCTTCCTCTCAGCTACTCCTTGGGAAAGGCCTGGAAAGAAGCTACAGCACAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879877 123 + 60714840 gagtggacggcagtgctgggattcgaaccctctgtcttctggcttggacgtcttaaccactGATCGCGTCTTCCACTCAGCTACTCCTTGGGAAAGGCCTGCAAAGAAGCTACAGCACAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641479 123 - 106955855 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCACGTCTTCCACTTGGCTACTCCCTGGGAAACGCCTGGAAAGAAGCTACAGCACAGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926294 123 + 64156825 gagtagacggcagcactgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCGCGTCTTCCACTCAGCTACTCGTTGGGAAAGGCCCGGAAAGAAGCCACAGCACAGGGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061783 123 + 51301725 GAGTAGACGGCAGCGCTGGGATTCAAACCCTCTGTCTTCTGGCTTGGAAGTCTTAACCGCTGATTGCGTCTTCCACTCAGCTACTCCTTGGGAAAGACCCGGAAAGAAGCCACAGCACAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772608 123 + 50890351 gagtagacggcagcgctgggattcgaaccctctgtcttctggcttggaaatcttaaccactGATGGCGTCTTCCACTCAGCTACTCCTTGGGAAAGGCCCGGAAAGAAGCCACAGCACAGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45335871 105 + 49145316 gagtagatggcag-gctgggattcgaaccc-cagtctcctggctcggaagccttaaccac----------------tcagctGCTCCTTGGGAAAGGCCCAGAGAGAAGCCACAGTGCAGGGC i calJac3.chr22 I 5 I 348 s canFam3.chr1 19571539 120 - 122678785 gagtgagcagcagcactgggactcaaaccc-aggcCTCGTGACTAGGAAGACACAACCATAGATAGAGCCTTCCACTGATCTACTAG--AGGAATGACCCAGAAGGGAGCTAGAGAACACAGT i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=47980.000000 s hg38.chr19_GL949748v2_alt 69463 33 + 1064304 ACAGCGGGGTCTA--AGGACCGTTCCGCGGAGCTC s panTro4.chr19 59003265 33 + 63644993 ACAGGGGGTTCTA--AGGACCGTTCTGCGGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880000 33 + 60714840 ACAGGGGGGTCTA--AGGACCGTTCCGCGGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641602 33 - 106955855 ACAGGGGGGTCTA--AGGACCGTTCCACGGGGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926417 33 + 64156825 ACAGGGGTGTCGA--AGGGCAGTTCCTCGGGGCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061906 33 + 51301725 ACAGGGGTGTCAA--AGGGCAGTTCCTCGGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772731 33 + 50890351 ACAGGGGTGTCGA--AGGGCAGTTCCTCGGGGCTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19571659 32 - 122678785 ---AGGAAGTTTATTGTGACTCAGAAGCTGAGCTC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45335976 348 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=44443.000000 s hg38.chr19_GL949748v2_alt 69496 19 + 1064304 AGCCAGCAGGACTGTGGGG s panTro4.chr19 59003298 19 + 63644993 AGCCAGCAGGACTGCGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880033 19 + 60714840 AGCCATCAGGACTGCGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641635 19 - 106955855 GGCCAGCAGGACTGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926450 19 + 64156825 AGCCAGCAGGGCTGCGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061939 19 + 51301725 AGCCAGCAGGGCTGTCGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772764 19 + 50890351 AGCCAGCAGGGCTGCGGGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3610685 19 + 145441459 AGTCTGGAGGCCTAGAGTG i mm10.chr7 N 0 C 0 s canFam3.chr1 19571691 19 - 122678785 AGCCAGGAGGACTGAGGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45335976 348 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=1002574.000000 s hg38.chr19_GL949748v2_alt 69515 355 + 1064304 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGC---------------TGCAGTGCTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCGGTTCTGACTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGCCCGGCCAGCCCCAGGCGGACTAGGTTCCCCCGGGTGTAGTCGGAGGAGCCAGAGTCTGCGGGCGGAGCCGGGAGAGAGGGGCCATCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCTACAGTCTCAAAGTtgagggggagtcgatg s panTro4.chr19 59003317 355 + 63644993 CTGTGGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGC---------------TGCAGTACTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCGGTTCTGACTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGCCCGGCCAGCCCCAGGCGGACTAGGTTCCCCCGGGTGTAGTCGGAGGAGCCAGAGTCTGCGGGCGGAGCCGGGAGAGAGGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCCACAGCCTCAAAGTtgagggggagtcgatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880052 355 + 60714840 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCTACTCAGGTTGGAAG---TCTCGGGT---------------TGCAGTGCTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCCGTTCTGGCTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTTCCCCGGGTGTAGTCGGAGGAGCCAGGGTCTGCGGGCGGAGCTGGGAGAGAGGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCCACAGTCTCAAAGTtgagagggagtcgatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641654 355 - 106955855 CTGCAGAAAAGGACAGTCCA-GCCCAGGGTCTCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGT---------------TGCAGTGTTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCACGGTTCTGGCTGCGCCAGTCAAAAGTGACCAGCGCACCCAGGGACATGAGAACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCTGGGTGTAGTCGGAGGAGCCAGAGTCTGTGGGCGGAGCCGGAAGAGAGAGGCCATCAGCTCCCGGACCTCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTggacttagggacctgactccacagtctcaaagttgagggggagtcgatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926469 357 + 64156825 CTGCAGGAAAGGACAATCCA-GCCCAGGGTCCCAGCCTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCACGGCTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCGGGGCCGGGAGAGACGGGTCGTCAGCTCCCGGATTCCGAAGTCTGGGCCCTGAACTCCAGGTTTCCAG-CCCTGGGGTggacttggggacctgactcctcagtctcaaagttgagggggagtcgatg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061958 356 + 51301725 CTGCAGGAAAGGAC-GTCCA-GCCCGGGGTCCCAGCCTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCGCGGCTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCGGAGCCGGGAGAGACGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAG-CCCTGGGGTGGACTTGGGGACCTGACTCCTCAGTCTCAAAGTTGAGGGGGAGTCGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772783 357 + 50890351 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCGCGGTTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGATTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCAGAGCCGGGAGAGGCGGGCCGTCAGCTCCCGGACCCCGAAGTCTGGGACCTGAACTCCAGGTTTCCAG-CCCTGGGGTggacttggggacctgactcctcagtctcaaagttgagggggagtcgatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45336324 356 + 49145316 CCACAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCTGCCACTCAGGTTGGAAGTCTTCTGGGGT---------------TGCAGCGCCCCTGGGGCTCAGGGGCGGACGCCAGCAGGAGCGTGGTTCTGGCTGCGACAGTCAAAAGCGACCAGCGCGCCCAGGGAGATGAGGACCAGACTGGCCAGTCCCAGGCGGACCAGGTTCTCCCTGGTGTAGTCGGAGGAGCTGGAGTCTGCGGGCCGAGCCGGGAGAGAGGGGCTGTCATCGCTTGGACCCAGAAGTCTAGGCCCTGAACTCCAGGTCTCCTGTCCCTggggtggacttaggggcctgactccccagtctgaaagttgaggggagtt--atg i calJac3.chr22 I 348 C 0 s mm10.chr7 3610704 318 + 145441459 -TTTCAGAGGGGCTGGTC---ACCAAGGATCCCAGCTTCTCTGTCCATC-TCCAGGCAG---TCTC-------------------TTCAGTTTTGCTGGGGC-------AGGAGACCATCAAAGGCAGAGCTCCTGCTGTGCCAATCACAAGTAACTATGATGCCCAAGCAGATGAGGACCATTCCTGCCAGCCCCAAACGGATGAGGTTTCCCTGGGTATAGTCCAAGGAGCCAGAACCTGCGAGCCAAAACGAGGGAGACAGGGTGTTGGTTC-TGTATCCCAGAGTCTTGTTGCTT--TTCTGTGTTTCTGA-CACACAGATGGAGTT-----------------GTCTCTAAGTTTA-ATGGAGTTGATG i mm10.chr7 C 0 C 0 s canFam3.chr1 19571710 364 - 122678785 CTCTTGAAAGGGCCTGTCCACCCCCAGGAAACCTATTTCTTCTCCCCATCTCTGGGAAGTCTTCTCACACTTGGAGGCATCTGTATCCAGT-CCTCTGGGGCTCAGGGCCTGACGCT-GCCTGGGTGCGACTCTGGCTGTGCCAGTCAAAAACAACCAGTGTGCCCAGGGAGATGAGGACCAGGCCAGCCAACCCCAGGCGGACGAGGTTGCTCTGAGTGTAGTCCAAGGAGCCTGAGCCTGTGGG----ACAGCAAGAGAGAGGCCTTCAGCTC-CAGAACCCAGAGTCTGGG-CCTGCCATCTGGGTCTTGAACCTACAGGGTGATACTGGGGACACAGCTCC-CAGTCTCAAAGTTGAGATGG-GTCAGTG i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=53918.000000 s hg38.chr19_GL949748v2_alt 69870 21 + 1064304 -------gaggcttcaactcctgggtcc s panTro4.chr19 59003672 21 + 63644993 -------gaggcttcaactcctgggtcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880407 21 + 60714840 -------gaggcttcaactcctgggtcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642009 21 - 106955855 -------gaggcttcaactcctgggtcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926826 21 + 64156825 -------gaggtttcaactcctgggtct i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47062314 21 + 51301725 -------GAGGTTTCAACTCCTGGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773140 21 + 50890351 -------gaggtttcaactcctgggacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45336680 21 + 49145316 -------gaggcttcacttcgtgggtct i calJac3.chr22 C 0 I 293 s canFam3.chr1 19572074 28 - 122678785 GGAGCAGGGGTCCTGGACTCCTGGGTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=77170.000000 s hg38.chr19_GL949748v2_alt 69891 31 + 1064304 aggaagaaggggct-ggggcctggactgctgg s panTro4.chr19 59003693 31 + 63644993 aggaagaaggggct-ggggcctggactcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880428 31 + 60714840 aggaagaaggggct-ggggcctggactcctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642030 31 - 106955855 aggaagaaggggct-ggggcctgcactcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926848 31 + 64156825 agggaggagggtct-ggggcctggactcccgg i rheMac3.chr19 I 1 I 2 s papAnu2.chr19 47062335 32 + 51301725 AGGAAGGAGggactgggggcctggactcctgg i papAnu2.chr19 C 0 M 1323 s chlSab2.chr6 46773161 32 + 50890351 aggaaggagggactgggggcctggattcctgg i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45336994 31 + 49145316 agggaggagggact-ggggcctggactcctgg i calJac3.chr22 I 293 I 2 s canFam3.chr1 19572102 30 - 122678785 -GGGAGAAGGGGGT-AGAGTCATGACCCCTAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=5254.000000 s hg38.chr19_GL949748v2_alt 69922 9 + 1064304 atcaggaag s panTro4.chr19 59003724 2 + 63644993 at------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880459 9 + 60714840 atcaggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642061 9 - 106955855 atcaggaag i nomLeu3.chr10 C 0 M 1589 s rheMac3.chr19 59926881 9 + 64156825 ctgagggag i rheMac3.chr19 I 2 C 0 s chlSab2.chr6 46773195 9 + 50890351 ctgagggag i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45337027 9 + 49145316 ccgagggag i calJac3.chr22 I 2 C 0 s canFam3.chr1 19572132 9 - 122678785 ACTGGGGAG i canFam3.chr1 C 0 I 4 e mm10.chr7 3611022 0 + 145441459 C e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I a score=29011.000000 s hg38.chr19_GL949748v2_alt 69931 29 + 1064304 gaggggctgggggcctggagtcctgggtc s ponAbe2.chr19 55880468 29 + 60714840 gaggggctgggggcatggagtcctgggtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59926890 29 + 64156825 gaggggctgggggtctggactcccgggtc i rheMac3.chr19 C 0 M 1236 s chlSab2.chr6 46773204 29 + 50890351 gaggggccgggggcctggactcctgggtc i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45337036 28 + 49145316 gagggact-ggggcctggactcctgggtc i calJac3.chr22 C 0 I 1 s canFam3.chr1 19572145 29 - 122678785 GAGGAATCAGGGGCCTGGATCCTTGGGCT i canFam3.chr1 I 4 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e panTro4.chr19 59003726 0 + 63644993 C a score=49811.000000 s hg38.chr19_GL949748v2_alt 69960 65 + 1064304 ---caggaaggaggggctgggggcctggagtcctgggtctgaggg--aggaggtactggggcccgggaat s panTro4.chr19 59003726 65 + 63644993 ---caggaaggaggggctgggggcctggagtcctgcgtctgaggg--aggaggggctgggtcccaggaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880497 65 + 60714840 ---caggaaggagggactggcggcctggagtcctgggtctgaggg--aggaggtattggggcccgggaat i ponAbe2.chr19 C 0 I 221 s chlSab2.chr6 46773234 65 + 50890351 ---gagggaggagggaccgggggcctggactcctgggtctgaggg--aggaggggccgggggcctggact i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45337065 63 + 49145316 ---gagggaggaggg--ctggggcctggactcctgggtccgaggg--aggagggactggggtcctggact i calJac3.chr22 I 1 C 0 s canFam3.chr1 19572174 68 - 122678785 GGGGAGCAGGGAGAGGCTGGGAACCCAGACACCTGGGATAGGGAGCAGGGAGGAACCAGGTCTCAGAC-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=24438.000000 s hg38.chr19_GL949748v2_alt 70025 64 + 1064304 -cctgggtct------------------------------------------------gagggaggaggagctggaggactagactcctggatctga-ggg---------aggaggggctggg- s panTro4.chr19 59003791 48 + 63644993 -cctgggtct------------------------------------------------gagggaggaggggctgcaggactagacccctgggtctga--------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880783 64 + 60714840 -cctgggtct------------------------------------------------gagggaggaggggctggaggactagacccctgggtctga-ggg---------aggaggggctgga- i ponAbe2.chr19 I 221 C 0 s chlSab2.chr6 46773299 113 + 50890351 -cctgggtctgagggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgggtcgtggagggaggaggggccgggggtctgggctcctgggtctggaggg---------aggaggggccggg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337128 60 + 49145316 -gctgggtct------------------------------------------------gagggaggagg-gctgg-ggcctggactgctgggtccga-ggg---------aggagga--ctgg- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19572242 77 - 122678785 CCCAGGGTTGGG----------------------------------------------GAGCAGGGAGGAACCCGAGGCCTGGATCCCCTGGCTGGG-GAGTAGGGGCCAAGGTGGGGGCTGGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=13869.000000 s hg38.chr19_GL949748v2_alt 70089 72 + 1064304 tcccaggaatcctgggtctgaggg-aggaggggctgcagga----ctagacccctgggtctgaaggaggagaggctg s panTro4.chr19 59003839 14 + 63644993 ---------------------------------------------------------------aggaggagaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880847 72 + 60714840 ggactagacccctgggtctgaggg-aggaggggctgcggga----ctagacccctgagtctgaaggaggagaggctg i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46773412 73 + 50890351 ggcctggactcctgggtctggggg-aggaggggctggggggc---ctgggctcctgggtctgggggaggaggggctg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45337188 69 + 49145316 ggcctggactgctgggtccgaggg-aggagggct---gaggc---ctggactcctgggtctgagggaggag-ggctg i calJac3.chr22 C 0 C 0 s mm10.chr7 3611022 32 + 145441459 -----------------------------------------TCCCCTGGTCGCCTGGGTCTGAAGGAGGAGAG---- i mm10.chr7 C 0 C 0 s canFam3.chr1 19572319 55 - 122678785 --------TCCCTGGGCTGGGGAGTAGGGAGGAACAGGGGGC---CCGGACTCCTG-----------GCAGGGGCTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=37676.000000 s hg38.chr19_GL949748v2_alt 70161 36 + 1064304 ggggcctgggctcctgggtctgagggcggaggtcct-- s panTro4.chr19 59003853 36 + 63644993 ggggcctgggctcctgggtctgagggcggaggtcct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880919 36 + 60714840 ggggcctgggctcctgggtctgagggaggagggcct-- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47063702 35 + 51301725 GGGACCTGGGCTCCT-GGTCTgagagaggaggggct-- i papAnu2.chr19 M 1323 C 0 s chlSab2.chr6 46773486 36 + 50890351 ggggcctgggctcctgggtctgggggaggaggggct-- i chlSab2.chr6 I 1 I 1 s calJac3.chr22 45337257 34 + 49145316 -gggcctggactcctgggtccgagggaggaggact--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3611054 11 + 145441459 ----CCAGAGCTTCT----------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19572374 38 - 122678785 GGGGCCCGGACCCCTAGATTGGGGAGCAGGGAGGCACC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102642070 1589 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=53795.000000 s hg38.chr19_GL949748v2_alt 70197 40 + 1064304 ggggcctgcattcct-------ggggc----ggaggaggcgggCCGGGCCT s panTro4.chr19 59003889 40 + 63644993 ggggcctgcattcct-------ggggc----ggaggaggcgggCCGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880955 40 + 60714840 ggggcctgcattcct-------ggggc----ggaggaggcgggccgggCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102643660 40 - 106955855 GGGGCCTGCATTCCT-------GGGGC----GGAGGAGGCGGGCCGGGCCT i nomLeu3.chr10 M 1589 C 0 s papAnu2.chr19 47063737 39 + 51301725 gggaccTGTATTCCT-------GGGGC----TGGGGAGACGGGCCGGCGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773523 39 + 50890351 ggggcctgcgttcct-------ggggc----tggggagacgggccggcgg- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45337291 39 + 49145316 ggggcctggactcct-------gggtccgagggaggcggCGGGCCG----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19572412 46 - 122678785 GGAGGCCGGACTCCCCCGCCAGGGAGC----AGGGGCTGCGGCCGGGCGC- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611065 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=1080960.000000 s hg38.chr19_GL949748v2_alt 70237 350 + 1064304 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCGGGGGCGCGGGCGCCCAGCAGCGTGAAGTCGGCCCAGGGCTGCGCGGAGTGGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGACCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCGGGGCCGCGTGAGC---GTCTTCC---Gctcgctcgctc s panTro4.chr19 59003929 346 + 63644993 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCTGGGGCGCGGGCGCCCAGCAGCGTGAAGTCGGCCCAGGGCTGTGCGGAGTGGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCGCGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCGGGGCCGCGTGAGC---Gtcttc-------cgctcgctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880995 350 + 60714840 CAGGGCCCTCACCTTCCCGGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCCGGGGCGCCGGCGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGAGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCCGGGCCGCGTGAGC---GTCTTTC---GCTCGCTCGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102643700 345 - 106955855 TAGGGCCCTCA-CTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCCGGGGCGCGGGCGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCAAGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTTCTCTGC--GGAGACGGGGTGAGGGTCCGGGGCCGCGTGAGC---GTCTTC-------CGctcgctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59928179 316 + 64156825 CAGGACCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCG----------------------------------GCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCGCCGGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTGCTCTGC--GGAGACCGGGTGAGAGTCGGGGGCCGCGTGAGC---GCCTTCC---GCTGGctcgctc i rheMac3.chr19 M 1236 I 2447 s papAnu2.chr19 47063776 350 + 51301725 CAGGACCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCGCGGGCGCCCAGCAGCGGGAAGTCAGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCTCCGGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTGCTCTGC--GGAGACCGGGTGAGAGTCGGGGGCCGCGTGAGC---GCCTTCA---GCTcactcgctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773562 350 + 50890351 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCGCGGGCGCCCAGCAGCGGGAAGTCAGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCGCCGGGAGCCACCACCGGCCCAGGCAGCGCCACCAGTGAGGGCCGCGGCAGCTGCTCTGC--GGAGACGGGGTGAGAGTGGGGGGCCGCGTGAGC---GCCTTCC---GCTCTCTCGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337330 344 + 49145316 CAGGG-CCTCACCTTCGGAGCGGACGGCCAGCACCGGGCTGCGCGGGGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGGGCGCGGACGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGATACTGCAGCGGGGCCGCCACGCCCACGCGGTACAGCACGAAGCTCATGTTCCGCAGGCCGCCCGCGCAGCGCAGGGTCACACGGCCGCCGGGGGCCACCACCGACCCGGGCAGCGCCACCAGCGACGGGCGCGGCAGCTCCTCTGC--GGGCGGGAGGCGGGAGGC--GGACCGCGTGGGC---GCCTTTCCAGGAGCGC------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3611065 339 + 145441459 ---------TACCTTCGAAACTGATGACCAGTGGCTGGCTGCGCTGTGATAGCACATAGGGGGCAGAAGGCGTGTGGTAATAGCAACAGTAGGTGCCAGGTGTGTGTGTGCCGATCAAAAGGAAGTCAGCCCAGGGCTGCACAGAGTCAATATACTGCAGAGGGGTTGCCACGCCTACGCGGTACAGTGCAAAACTCATGCCCGGTATGCGGCCTGCACAGCGCAGGCTTACGTTGGCTCCCGGGGCCACCACAGGCCCAGGCAGTGCCACCAGTGATGGTCTGGGGAGCTGATCTGT--GGAACACAGGCAAG-GTCTTAGATAGGCTATCT---GTCCTG----AATGGtcctctc i mm10.chr7 C 0 C 0 s canFam3.chr1 19572458 343 - 122678785 -CGGGCCCTTACCGTCAGCGCTGATGACCAGCGGCTCGCTGCGCAGCGACAGCACGTACGGGGAGGACGGCGTGTGGTAGTAGCAGCTGTAGGTGCCCGGCGCGCGGGCTCCGGGCAGCGGGAAGTCGGCCCAGGGCTCCGCCGAGTCGCGGTACTGCAGCGGCGCCGCCACCCCCACGCGGTACAGCGCGAAGCTCATGCCCCGCAGGCGGCCGGCGCAGCGCAGGCTCACGTTGGCATCGGGCGCCACCACCGGCCCGGGCAGCGCCACGAGCGACGGGCGCGGCAGCTGGTCTGCGAGGGGCACGGGCGGGGGCGAGCGCTGGCGCGGGCCTGGCccccc---g----------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=57000.000000 s hg38.chr19_GL949748v2_alt 70587 104 + 1064304 gctctgtttctccttct-cctctgtctctcgc------------------------------------------------------------tttctctgtgcc-tctctctctctttctgc----ctctctt---------------tctctctgcctg--tctctctctctgtctgcctctctct s panTro4.chr19 59004275 104 + 63644993 gctctgtttctctttct-cctctgtctctcgc------------------------------------------------------------tttctctgtgcc-tctctctctctttctgc----ctctctt---------------tctctctgcctg--tctctctctctgtctgcctgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881345 111 + 60714840 Gctctctttctctttctgcctctgtctctcgc------------------------------------------------------------tttctctctgcc-tctctctctctctctgcctctctctctt---------------tctctctgcctgcctctctctctctctctgcctctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644045 97 - 106955855 gctgtctt----------tctctgtctctcgc------------------------------------------------------------tttctctctgcc-tctctctctctttctgt--ctctctctc---------------tctgtctgcctg--tctctctctctgtctgcctgtctct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47064126 161 + 51301725 ------tctctctttctgcctctgtctctctctctctctgtctttctcttcctctctgcctgtctctctctttctctctgcctgtctctctctttctttctgcc-tctctctttctttctgc--ctgtctctt---------------tctctctgcctg--tctctctttctctctgcctgtctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773912 71 + 50890351 ----TCTTTCTCTTTCTGCCTCTGTCTCTCTC-----------------------------------------------------------------------------------------------TCTCTT---------------TCTCTCTGCCTG--TCTCTCTCTCTCTCTGCCTGTCTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337674 95 + 49145316 ------------Gctctgcctgtgtctctctt-----------------------------------------------------------ctctctttcctctgtctctctctcgttctgcctctgtctctt---------------tctcgctccc----tctgtctctgtctctgtctctct-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3611404 101 + 145441459 ------------------cctcctcctccctt------------------------------------------------------------ctcttctgcctc-ccttcccatcccccaaactctctcccctcAGTAAGTTCAGGAATTTCTCAGTGTA--CCTCCCTATC-----GCCTCTCTCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19572801 46 - 122678785 ----------------------------------------------------------------------------------------------gccctgcgcc-cctc-----------------ctcccgc---------------tccccgaccctg--tgcccc-------cggcctg----- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=2692.000000 s hg38.chr19_GL949748v2_alt 70691 2 + 1064304 ct s ponAbe2.chr19 55881456 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644142 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47064287 2 + 51301725 ct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773983 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337769 2 + 49145316 ct i calJac3.chr22 C 0 C 0 s mm10.chr7 3611505 2 + 145441459 TT i mm10.chr7 C 0 I 1 e canFam3.chr1 19572847 0 - 122678785 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=4280.000000 s hg38.chr19_GL949748v2_alt 70693 19 + 1064304 gcctccctctctctctgcc s ponAbe2.chr19 55881458 19 + 60714840 ttctctctgcctgcctctc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47064289 17 + 51301725 --ctttctctctgcctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773985 15 + 50890351 --C--TCTCTCTGCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337771 19 + 49145316 ttctcttttttttttagcc i calJac3.chr22 C 0 I 893 s mm10.chr7 3611508 15 + 145441459 TGTTCCTTTTCTACC---- i mm10.chr7 I 1 I 1 s canFam3.chr1 19572847 19 - 122678785 gcccccttctcccgctgcc i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=4446.000000 s hg38.chr19_GL949748v2_alt 70712 15 + 1064304 ----tccctctct--ctgcct s ponAbe2.chr19 55881477 15 + 60714840 ----tctctctct--ctgcct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47064306 17 + 51301725 ----tctctctctgcctgtct i papAnu2.chr19 C 0 I 2765 s chlSab2.chr6 46774000 15 + 50890351 ----TCTCTCTCT--CTGCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3611524 14 + 145441459 ----TCTCCTACC--CTCCT- i mm10.chr7 I 1 C 0 s canFam3.chr1 19572866 15 - 122678785 tccgcctcctgct--ct---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=10439.000000 s hg38.chr19_GL949748v2_alt 70727 35 + 1064304 ccctc----tctctctgcc----tccctctctctctgcctccc s ponAbe2.chr19 55881492 41 + 60714840 ctctctctttctctctgcctg--tctctctctctctgcctctc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47067088 39 + 51301725 ctctt----tctctctgcctgtctctctctctctctgcctgtc i papAnu2.chr19 I 2765 C 0 s chlSab2.chr6 46774015 35 + 50890351 GTCTC----TCTCTCTGCCTG----TCTCTCTCTCTGCCTGTC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3611538 36 + 145441459 ------TCACCTCACT-CCTGTGCCCTTCTCCCATTTCTTCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19572881 35 - 122678785 cgttc----cctctccgcc----gctcaccgacgcccctgccc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=33036.000000 s hg38.chr19_GL949748v2_alt 70762 117 + 1064304 tc----tctctctgc--------ctccctctctctctgcctccctc----tctctctgcctgcctctctctttgcctgcctctctctctgcctccctct-------------ctctgcctccctctctctctgcctccctctctct s ponAbe2.chr19 55881533 129 + 60714840 tctctttctctctgcctgcct--ctctctctctctctgcctctctctctttctctctgcctgtctctctctct--ctgcctctctctctttctctctgc-------------ctgcctctctctctctctctgcctctctctcttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47067127 129 + 51301725 tctc--tctttctctctgcct--gtctctctctttctgcctgtctctctttctctctgcctgtctctctctctctctgcttgtctctctctctctctct-------------gcctgtctctctctctctctgcctgtctctctct i papAnu2.chr19 C 0 I 892 s chlSab2.chr6 46774050 89 + 50890351 ------------------------TCTCTCTCTCTCTGCCTGTCTCTCTTTCTCTCTGCCTGTCTCTCTCTCTCTCTGCCTGTCTCTCTCTTTCTCTCT-------------GCCTGTCTCTCTCT-------------------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19572916 126 - 122678785 ----------------TGCCTCACTCTGCATTTCTCTCCCTCCCTCCCAACATCTCTG--TGTCTCTCGTTATTTCTGCTTTTGTGTCCTTTGCATCCTAGTCGGTGGCGCCCCCTGTATCTTCATCCCCGAGCACACCTTTCT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=684.000000 s hg38.chr19_GL949748v2_alt 70879 8 + 1064304 ctgcctcc s ponAbe2.chr19 55881662 8 + 60714840 ctctctgc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47068148 8 + 51301725 ctgtctct i papAnu2.chr19 I 892 C 0 s canFam3.chr1 19573042 8 - 122678785 CTTGCAGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e chlSab2.chr6 46774139 0 + 50890351 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=6253.000000 s hg38.chr19_GL949748v2_alt 70887 10 + 1064304 ctctctctct s panTro4.chr19 59004379 10 + 63644993 ctttctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881670 10 + 60714840 ctgtctctct i ponAbe2.chr19 C 0 I 226 s papAnu2.chr19 47068156 10 + 51301725 ctctttctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774139 2 + 50890351 --------CT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19573050 10 - 122678785 CTCTGCCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=1205.000000 s hg38.chr19_GL949748v2_alt 70897 2 + 1064304 gc s panTro4.chr19 59004389 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47068166 2 + 51301725 gc i papAnu2.chr19 C 0 I 22 s chlSab2.chr6 46774141 2 + 50890351 GC i chlSab2.chr6 C 0 I 4 s canFam3.chr1 19573060 2 - 122678785 GT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e ponAbe2.chr19 55881680 226 + 60714840 I e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=34435.000000 s hg38.chr19_GL949748v2_alt 70899 58 + 1064304 ctccctctctctctgcctccctc------tctctctgcctgcctctctctctgcctgcctctct s panTro4.chr19 59004391 58 + 63644993 ctgcctctctctctgcctccctc------tctctctgcctccctctctctctgcctccctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881906 62 + 60714840 ctctctctctctctgcctctctc--tctttctctctgcctgtctctctctctgtctgcctgtct i ponAbe2.chr19 I 226 C 0 s papAnu2.chr19 47068190 56 + 51301725 ctctctctctctctgcctgtctctctctttctctctgcctgtctctctct--------tactct i papAnu2.chr19 I 22 C 0 s chlSab2.chr6 46774147 56 + 50890351 CTCTCTTTCTCTCTGCCTGTCTCTCTCTTTCTCTCTGCCTGTCTCTCTCT--------TCCTCT i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19573062 50 - 122678785 --------GTCCCCGGATGTCCC--CTTGTCTGTCTGCCTGTGGTTCACTGAAA----TTCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=36988.000000 s hg38.chr19_GL949748v2_alt 70957 42 + 1064304 ctctgcctcc-------ctctctttctgcctccctctctctctgcctcc s panTro4.chr19 59004449 42 + 63644993 ctctgcctcc-------ctctctctctgcctccctctctctctgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881968 36 + 60714840 ctct-------------ttctctctctgcctccctttctctctgcctcc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47068246 42 + 51301725 ctctgcctct-------gtctctttctctttgtctctctctctgcctcg i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46774203 42 + 50890351 CTCTGCCTCT-------GTCTCTTTCTCTTTGTCTCTCTCTCTGCCTCG i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45338683 49 + 49145316 ctcagcctcccgagtagctTtctctctctctctctttctctctgcttct i calJac3.chr22 I 893 C 0 s canFam3.chr1 19573112 42 - 122678785 TTGTACGTCC-------CTGTTTTAATCTCCCCCGCGCTGTGTGTTTCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=50583.000000 s hg38.chr19_GL949748v2_alt 70999 45 + 1064304 -----ctctctctc--------tgcctccc------tttctccttctgcctctttctc--tctctc s panTro4.chr19 59004491 45 + 63644993 -----ctctctctc--------tgcctccc------tttctccttctgcctctttctc--tctctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882004 45 + 60714840 -----ctttctctc--------tgcct--c------tttcttcttctgcctctttctctGTCTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644144 41 - 106955855 -----ctctctctc--------tgcctccc------tttctccttctgcctctt------tctctc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068294 45 + 51301725 -----ctttctgtc--------tgcctctc------tttctccttctgcctctgtctc--tttctc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 46774251 45 + 50890351 -----CTTTCTCTC--------TGCCTCTC------TTTCTCCTTCTGCCTCTGTCTC--TTTCTC i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45338732 33 + 49145316 -----ctctctttc--------c-cccctc------tctctccc-----------ctc--catctc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573154 64 - 122678785 CTACCCTGGATCTCCGAGGCAGTGTCTGCCGTATGGTTTCTTCTGGTGCTTCTGGGTT--TCTCCc i canFam3.chr1 C 0 I 198 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=41042.000000 s hg38.chr19_GL949748v2_alt 71044 30 + 1064304 tccccccgcactgtacctctctc----tctctct s panTro4.chr19 59004536 30 + 63644993 tccccccgcactgtacctctctc----tctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882049 34 + 60714840 TCCCCCCGCACTGTACctctctctctttctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644185 34 - 106955855 tccccccgcactgtacctctctctctttctctct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068339 30 + 51301725 tctcccctcactctacctctctc----tctcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774296 30 + 50890351 TCTCCCCTCACTCTACCTCTCTC----TCTCTTT i chlSab2.chr6 C 0 I 17 s calJac3.chr22 45338765 29 + 49145316 cccccccac-ccgtccctccctc----cctctct i calJac3.chr22 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=2552.000000 s hg38.chr19_GL949748v2_alt 71074 37 + 1064304 gctcccctgtctctctctctctgctcccctgtctctc---- s panTro4.chr19 59004566 21 + 63644993 gctcccctgtctctctctctc-------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882083 21 + 60714840 gctcccctgtctctctctctc-------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644219 15 - 106955855 gctccc------gtctcgctc-------------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068369 15 + 51301725 ------ctgtctgccccaccc-------------------- i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45338794 25 + 49145316 gtccccgcgactccccccgcc----------------ccac i calJac3.chr22 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e chlSab2.chr6 46774326 17 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=619.000000 s hg38.chr19_GL949748v2_alt 71111 7 + 1064304 tctctcc s panTro4.chr19 59004587 1 + 63644993 ------c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882104 1 + 60714840 ------c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644234 1 - 106955855 ------c i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068386 6 + 51301725 tctct-c i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46774343 6 + 50890351 TCTCT-C i chlSab2.chr6 I 17 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e calJac3.chr22 45338819 0 + 49145316 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=20660.000000 s hg38.chr19_GL949748v2_alt 71118 24 + 1064304 ccctagtg--------------tctctgtatctgtctt s panTro4.chr19 59004588 24 + 63644993 ccctAGtg--------------tctctgtatctgtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882105 24 + 60714840 ccctAGTG--------------TCTCTGTATCTGTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644235 21 - 106955855 ccctagta--------------tctctgtatct---ct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068392 24 + 51301725 ccccagta--------------tctctgtgtctttctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774349 24 + 50890351 CCCCAGTA--------------TCTCTGTGTCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338819 11 + 49145316 ------------------------actgtatcttt--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573416 37 - 122678785 ccctagtaaagaatcaTCCATTTCTCTGGTTCTCTTT- i canFam3.chr1 I 198 C 0 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=235227.000000 s hg38.chr19_GL949748v2_alt 71142 110 + 1064304 ttcttgtgt-----------ctgtgaatct----gtttgcccgcctcgctctgtctctct-----ttccctatatctctctgtccctcC-CCCAACTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA s panTro4.chr19 59004612 112 + 63644993 ttcttgtgt-----------ctgtgaatctatcagtttgcccgcctcgctctgtctct-------ttccctatatctctctgtccctCC-CCCAACTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882129 98 + 60714840 TTCTTGTGT-----------CTGTGAATCTATCAGTTTGCCCGCCTCGCTCTGTCTCT---------------------CTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644256 114 - 106955855 gtcttgtgc-----------ctgcgaatctatcagtttgccagcctcgctctgtctctct-----ttccctatatctctctgtccctcC-CCCACCTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59930942 110 + 64156825 TTCTTGTGT-----------CTGTGAATCTGTCAGTTTGCCTGCCTCGCTCTCTCTTT---------ACCTGTATCTCTCTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------CGCTTCTCCTC----CCTGACCCCA i rheMac3.chr19 I 2447 C 0 s papAnu2.chr19 47068416 108 + 51301725 --cttgtgt-----------ctgtgaatcTGTCAGTTTGCCCGCCTCGCTCTCTCTTT---------ACCTGTatctctctgtccctcc-cccacctcccttgTTCCACC-----------CGCTTCTCCTC----CCTGACCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774373 108 + 50890351 --CTTGTGT-----------CTGTGAATCTATCAGTTTGCCTGCCTTGCTCTCTCTTT---------CCCTGTATCTCTCTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------TGCTTCTCCTC----CCTGACCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338830 114 + 49145316 ctctcGTGT-----------CTGTGAAACTATCAGTTTGCTCGCGTCACTCTGTCTCTCT-----TTCCCTGTATCTCTCTGTCCTTCC-CCCGCCTCCCTTGCTCCACC-----------CGCTTCTCCTG----CACAACCCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573453 146 - 122678785 CCCTCATGTAGTAATTTTTGCTCTGGGTCATTGTACAAGCCTGTCTCTGTATGTCTTTTTCCGTATCTCCTGTATCTCTCAGTCCCTCCTTCTCCCTCCCTCATCACACCCCAAAGTCCCTCCTTTCCCCTCAGCGCCCCACCTCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=1606428.000000 s hg38.chr19_GL949748v2_alt 71252 481 + 1064304 GGACCTCACCTGTCACCAGCAGCTCCAGGACATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAAATTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCATCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacaattactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGCCTTGTTAA s panTro4.chr19 59004724 481 + 63644993 GGACCTCACCTGTCACCAGCAGCTCTAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCATCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCTAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTTCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacaactactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGGCTTGTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882227 481 + 60714840 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTTGGTAGAAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCACCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATTCCGGAAGAGAAGGGGAGCCATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCTGGCTGAGCTCCCAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacgattactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGGCTTGTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644370 481 - 106955855 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCAGGTTGGGGTGCCCGGCACCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTAGGGTAGTATGAAGCTGGGGGGACTGAATAAACAGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAGAATCaccttggacgattactgccccttacttagcctcagtttcgtgtttgt-aaaatcggggagagactggactaCAATCAAGGCTTGTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931052 478 + 64156825 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTGGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCAATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCaccttgaacgattactgcctctttctcagtctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCACGGCTTGTTAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47068524 478 + 51301725 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTAGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCAATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCTGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCACCTTGAACGATTACTGCCTCTTTCTCAGTCTCAGTTTCCTGTTTGT-AAAATCAGGGAGAGACTGGACTACAATCACGGTTTGTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774481 479 + 50890351 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTGGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCGATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCaccttgaacgattactgcctctttctcagtctcagtttcctgtttgtaaaaatcagggagagactggactaCAATCACGGCTTGTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338944 478 + 49145316 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCTTCCCATAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGGAAGAACTCCGCCAGCTCCGAGGACACGTCTCGGAGGAGAAGGGGATCGGTCTCTCCAGACTTGAAAAGTGCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCGGGGGTCACAACCGAAGCTGGCCGAGCTCCCAGCCATGGCCTGGG---GTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGACCT------CCTGGGAGCCCCAGAAGATGGAAGGGAAGTTGGGGAAAGAGGAAAATCaccctggacggttactacccctttctcagcctcagttccctgttggt-gaaatcagggggagactggacaacagtcaaggCTTGTTAA i calJac3.chr22 C 0 I 569 s mm10.chr7 3611574 443 + 145441459 AGACCTCACCCGTTACCAGCAGTTCCAGAACATTACTGGGCTGAGACCAGACACCTGGCCCCCAGTCTGTCTTGCGGTAGCGGCAGTGATAACTGCCCCCTTGGGCCGGAGTCACTTCTTCCAGGAAGAACTCAGCCAGCTCAACGGACACATCCCGGAGGAGCAGAGGGGTGACAAGGCCACTTTTGAAGAGTGCAAACCGCCAGGCAGATTGAGGTGCGCGGCAAGTCAAGGTCACGTTGATCCCAGGAGTCACAACTGCAGCAGGATGAGCTCCCAGCCATGGCTGGGG---GTATGAGGCTAGGGGCGCTTAATAAAAAAGACTGCTTGGGTCCTTAGGACCCTCCAACCCAGAAGGCCCAGGAGCTTAAGCAGAAGTCGGA-------------CACCATGAA---------CCTCTCTCT-------------------AT-AAAGAAGGGGAGGGCCTGGAATACAATCACAGCCGGCCTA i mm10.chr7 C 0 C 0 s canFam3.chr1 19573599 457 - 122678785 GGACCTCACCTGTCACCAGCAGTTCCAGTGTATCACTGGGGTGGGACCAGATACCCAGGTCCCAGCCAAGACTCCGGTAGCAGCAGTGGTAACTGCCCCCCTGGGCTGGGGTCACCTCCTCCAGGAAGAACTCTGCCAGCTCCATGGACACATCCCGGTACAGCACAGGAGTGATTTCTCCAGACTTGAAGAGTGCAAACCTCCAGGCAAGTTGAGGTGCCTGGCACCTCAAGGTCACGTTGACCCCAGGGGTTACAATTGCAGCAGGCTGAGCCTCCAGCCATGGCTTGGG---GTATAAGGCTGGGGAGACTGAATAAACAGAATT-CCTGGGTCCCTGGGCTT------CCTGG--------------------GCAGGTGGGGTGGGAAGAGAATCacctggggcagtccctgcctctttctcatcctcagttccctgcttat-aaaatagggaaggtgctggacCCCAGTCAAGGATTGTCAA i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=159370.000000 s hg38.chr19_GL949748v2_alt 71733 56 + 1064304 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT s panTro4.chr19 59005205 56 + 63644993 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882708 56 + 60714840 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644851 56 - 106955855 AACCAGGTGCAAATCAGTGGGGCAGGAGAGAAACTTCTGAGCTTT----ACTCCACAGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931530 56 + 64156825 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069002 56 + 51301725 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774960 56 + 50890351 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45339991 54 + 49145316 aaCCAGGTGCACATC--TGGGGCAGGACAGAAACTTCACAGCTTC----ACTCCACAGTT i calJac3.chr22 I 569 C 0 s mm10.chr7 3612017 56 + 145441459 AACAAGCTGACAATCACTGGAATAGTACTCTTAACTTTGAGCTTT----TCCCCATAGTT i mm10.chr7 C 0 I 3275 s canFam3.chr1 19574056 57 - 122678785 GACTAGCCGCAAATTAGAATAGCAGG---GTCACTCCTGAGCTTTATTGACTCCGTGTTT i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=111562.000000 s hg38.chr19_GL949748v2_alt 71789 65 + 1064304 TGTAAACACAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTATTattattattttta s panTro4.chr19 59005261 65 + 63644993 TGTAAACACAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTATTattattattttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882764 65 + 60714840 TGTAAACATAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-tt-----ttattattattattattttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644907 65 - 106955855 TGTAAACATAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTAttattattattttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931586 59 + 64156825 TGTAAACACAGT-------AGTCAGGTCCCAGAACTCTGTAATTT-----TTTTtttttttttttttttta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069058 56 + 51301725 TGTAAACACAGT-------AGTCAGGTCCCAGaactctgtaa--------tttttttttttttttttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775016 55 + 50890351 TGTAAACACAGT-------AGTCAGGTCCCAGAACTCTGTAA---------TTTTAttttattttttttta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340045 57 + 49145316 TGTAAACATAGTTTCAAAGTGTCAGGTCTCAGAAGTCTGTCA-TT-----TTATTCCTATTA--------A i calJac3.chr22 C 0 C 0 s canFam3.chr1 19574113 70 - 122678785 TTTAAACATAATGTCAAGGGATTGGGTCCCTGAAATCTGCAA-TTTTAAATTGTTCTTCAGACTATTTGTA i canFam3.chr1 C 0 I 1653 e mm10.chr7 3612073 3275 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=119402.000000 s hg38.chr19_GL949748v2_alt 71854 65 + 1064304 agtaatgagatgggagggggcggtctccctat----gttgagcaggttggtcttaaactactggcctca s panTro4.chr19 59005326 61 + 63644993 agtaatgagatgggggggg----tctccctat----gttgagcaggttggtcttaaactactggcctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882829 61 + 60714840 agtaatgagatgggggggg----tctccctat----gttgaccaggttggtcttgaactactggcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644972 61 - 106955855 agtaatgagatgggggggg----tctccctat----gttgactaggttggtcttgaactactggcctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931645 60 + 64156825 agtaatgagatggggatg-----tctccctat----gttgcccaggctggtcttaaactgccagcctca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069114 60 + 51301725 agtaatgagATGGgggtg-----tctccctat----gttgcccaggctggtcttaaactaccagcctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775071 60 + 50890351 agtaatcagatgggggtg-----tctccctat----gtcggccaggctggtcttaaactaccagcctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340102 63 + 49145316 AGTAATGAGATGGgggg------cctatctatattggttggccaggttggtcttcaactactggcctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=192351.000000 s hg38.chr19_GL949748v2_alt 71919 251 + 1064304 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacacccagA-------------Ctttttttttttt---------tttttttttttttgaggcagggtcttgctgtgttgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcttgggctcaaacagtcctccacctcagcctcctgagtacctgggaccacaggcacatgccactacaccaggctaatttttttttt---tta s panTro4.chr19 59005387 254 + 63644993 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagA-------------Ctttttttttttt---------tttttttttttttgaggcagggtcttgctctgttgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaacactcctccacctcagcctcctgagtacctgggaccacaggcacatgccgctacaccaggctaattttttttttattttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882890 265 + 60714840 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagACttttttttctttctttttttttttt---------tttttttttttttgaggcagggtcttgctctgttgctcaaggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaacaatcctccacctcagcctcctgagtacctgggaccacaggcacatgccactacaccaggctaatttttttttt---tta i ponAbe2.chr19 C 0 I 324 s nomLeu3.chr10 102645033 245 - 106955855 agcaatcctcccagctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagA------------------Cttttctt---------tttttttttttttgaggcagggtcttgctctg-tgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaatgatcctccacctcagcctcctgagtacctgggaccacaggcacatgtcactacaccaggctaattttttttat---ttt i nomLeu3.chr10 C 0 I 333 s calJac3.chr22 45340165 260 + 49145316 agcagtcctcccaccttggcttctcagagtgctaagattacaacctggtgccgctgcgcccggA-------------CTATTGtttttttaatttattattattatttttttgagacagggtgttgctctgttgctc-aggcaggagtgcagtggtgtgttctcagctcactgcagcctcaacctcctgagttcaaacaatcctctgcctcagcctcctgagttcctgggaccacaggcgcacggtgctacaccaggctgttttttttgtt---act i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46775131 0 + 50890351 C e papAnu2.chr19 47069174 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59931705 0 + 64156825 C a score=46982.000000 s hg38.chr19_GL949748v2_alt 72170 61 + 1064304 atttttagtagagacgagcattcgctatattgcccaggctactcttgaactcttgggctcg s panTro4.chr19 59005641 61 + 63644993 atttttagtagagacgagcattcgctatattgcccaggctactcttgaactcttgggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883479 61 + 60714840 atttttagtagagacgagcattcactatgttgcccaggctactgtcaaactcttgggctca i ponAbe2.chr19 I 324 C 0 s nomLeu3.chr10 102645611 61 - 106955855 atttttagtagagatgagcattcgctatgttgcccaggctactctcgaactcttgggctca i nomLeu3.chr10 I 333 C 0 s calJac3.chr22 45340425 61 + 49145316 atcagtagtagggacaagcatttgctatgttgcccggactagtctcgaacccctgggctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46775131 0 + 50890351 C e papAnu2.chr19 47069174 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59931705 0 + 64156825 C a score=291544.000000 s hg38.chr19_GL949748v2_alt 72231 120 + 1064304 agcaatcctcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG s panTro4.chr19 59005702 120 + 63644993 agcaatcctcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883540 120 + 60714840 agcaatcctcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATGTTTGCAATATAGTATTTCAAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102645672 120 - 106955855 agcagtcctccccccttggcctcccaaagtgctaggattacaggtgtgagtcaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931705 120 + 64156825 agcaatcctctcaccttggcctcccaaagttctgggattacgggtgtgagccaccacacccagccAGAACTCTAATTTTAAATAATTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069174 120 + 51301725 agcaatcctcccaccttggcctcccaaagttctgggattatgggtgtgagccaccacacccagccaaaactctaattttaaataactttccaGAATATTTGCAATATAGTATTTCAAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775131 120 + 50890351 agcaatcctcccaccttggcctcccaaagttctgggattacaggtgtgagccaccacacccagccAGAACTCTAATTTTAAATAACTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340486 120 + 49145316 agcgatcctcccaccttggcctcccaaagtgctgagcttacagatgtgagccaccacacccagccAGAACTCCAATTTTAAATAGCTTTCCAGAATATATGCTATATAATATTTCAAGAG i calJac3.chr22 C 0 I 300 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=467744.000000 s hg38.chr19_GL949748v2_alt 72351 212 + 1064304 TTGCCAAAACTTG----ctatttggaa--aagaaaaa--tgttggatccctacctcataccatttcccaaaacaacttccagattaattaaagac---cctgtgtttctttttttttaaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttgtatggaagattaattaattt s panTro4.chr19 59005822 213 + 63644993 TTGCCAAAACTTG----ctatttggaa--aaaaaaaa-atgttggatccctacctcacaccatttcccaaaacaacttccagattaattaaagac---cctgtgtttcattttttttaaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttctatggaagattaattaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883660 213 + 60714840 TTGCCAAAACTTG----ctatttggag--aaaaaaaaaatgttggatccctacctcacaccatttcccaaaacaatttccagattaattaaagac---cctgtgtttcatttttttt-aactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaagtcttcttaaaatataaaataaaaagttctatggaagattaattaattt i ponAbe2.chr19 C 0 I 163 s nomLeu3.chr10 102645792 213 - 106955855 TTGCCAAAACTTG----ctatttggaa--aaaaaaaa-aagttggagccctacctcacaccatttcccaaaacaacttccagattaattaaagac---cctgtgtttcatttttttttaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttttatggaagattaattaattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931825 215 + 64156825 TTGCCAAAACTTA----ctatttggaag-aaaaaaaa-atgttggatccctacctcacaccatttcccaaaacaactttcagattaattaaagacctacctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataagaagttctatggaagattaattaattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069294 216 + 51301725 TTGCCAAAACTTa----ctatttggaagaaaaaaaaa-atgttggatcCCTACCTCACATCATTTCCCAAAACAACTTTCAGATTAATTAAAGACCTAcctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttGGGGTAAGGAAggcttcttaaaatataaaataagaagttCTATGGAAGATTAATTAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775251 213 + 50890351 TTGCCAAAACTTA----CTATTTGGAAgaaaaaaaaa-atgttggatccctaccccacaccatttcccaaaacaactttcagattaattaaagacctacctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaat---aagttctatggaagattaattaattt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340906 214 + 49145316 TTGCCAAAACTTGTTATCTATTAGGGA--ggaaaaaa-atgttggttccctacctcacaccattcccctaaacaacttccagattaattaaagacctacctgtgtttcattttttt--aattatcagagtattcaaaaaactataggaaaatttctttgtcttggggtagggagggcttcgtaaaatataaaataaaaagttctaTGGAGGATTAATTT---- i calJac3.chr22 I 300 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=1250223.000000 s hg38.chr19_GL949748v2_alt 72563 576 + 1064304 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTGGAGGACAAATGATAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCTGTTgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcttgtagttccagctgtttgggatgctgagtaggagaattacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattgtctgagcccaggaattcaaagctgcagtgagctatgatagagccaccgtactccagcccgggtgacacaatgagaccccatctctaa----aaatgaataaaaataaGggtcggg-tgagggggctcatgtttgtaatcccaacacttt s panTro4.chr19 59006035 576 + 63644993 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTAGAGGACAAATGATAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTATAGGAAGGCTGTTgggtccggtggcccacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcttgtagttccagctgtttgggatgctgagtaggagaattacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattgtctgagcccaggagttcaaagctgcagtgagctatgatagagccactgtactccagctcgggtgacagaatgagaccccatctctaa----aaatgaataaaaataaGggtcggg-tgagggggctcatgtttgtaatcccaacacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884036 577 + 60714840 GACCACTTCAAATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTAGAGGACAAATGAGAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCTgctgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagactagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggtgtggtagtgctagcctgtagttccagctgtttgggaggctgagtaggagaatcacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactcccgcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattctctgagcccaggagttcaaagctgcagtgagctatgatagagccactgtactccagcccgggtgacagaatgagaccccgtctctaa----aaatgaataaaaataaGggtcgggttgagggggctcatgtttgtaatcccaacacttt i ponAbe2.chr19 I 163 C 0 s nomLeu3.chr10 102646005 576 - 106955855 gaccacttcaaatttcttaagttgtgtatgctgaaagacaAAACTAGAGGACAAATGACAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCCgctgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcctgtagttccagctgtttgggaggctgagtaggagaatcacttgaaccctagagtcagaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgacgctggaggattgtctgagcctaggagtttgaagctgcagtgagctatgatagagccactgtactccagcccgggtgacagaatgagaccccatctctaa----aaatgaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccaacacttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932040 567 + 64156825 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTGGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAGGCTgccaggtgtggtagcttatggctgta-----agcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgtggtggtgctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccctagaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgagcagcagagtgagaactc----------------------------------catGATGACGTG---------------CACTttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaatgaactatgatagagccacttcacgccagccttggtgacagaattaag---cgtctttaaaaataaataaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccagcacttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069510 572 + 51301725 GACCACTTCAAATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTGGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAggctgccaggtgtggtggcttatggctgtaatcccagcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgagGTGGTGctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccttagaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgagcagcagagtgagaaCTC----------------------------------CATGATGacgtg---------------cactttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaatgagctatgatagagccactgcactccagcctgggtgacagaatgaag---catctttaaaaataaataaataaaaataagggtcAGG-TGAGggggctcatgtttgtaatcccagcacttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775464 572 + 50890351 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTAGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAGGCTgccaggtgtggtggcttatggctgtaatcccagcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgtggtggtgctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccctggaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgggcaacagagtgagaactc----------------------------------catGATGATGTG---------------CACTttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaataagctatgatagagccactgcactccaggctgggtgacagaatgaag---catctttaaaaataaataaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccagcacttt i chlSab2.chr6 C 0 I 8 s calJac3.chr22 45341120 613 + 49145316 GACCGCTTCAGATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTAGAGGACAAATGACAGTACTGGCAGACATCACTTATCCACAAATCACACAAATTAAGAGTGTAGGAAGGCTGCGGCGCTCAGT-gctcacacctgcaatcccagcactttgggaggccgagatgggtggatcacctgaggtcaggagttcgagaccaccctggccgacatggtgaaatcctatctctaccaaaaatgcaaaacttcgccagttgtggtggtgctagcctgtagtcccacctggttcagaagctgagcaggagaactgcttgaacccaggaggcggaggtt--------tcgtgagcacaccactgctctccaacctgggcaac--agtgagactccacccaccgaaaaaaaaaaaaaaaCCTTAgctaggcatggtggcatgcacctgtaattccaacactttgggagactgagg-tggaggattgtctgagctcaggagtttgaagctgcagtgagctatgatcgtgccactgcattccagcctgggtgacagaatgagaccctgtctctaa----aaaataaaaataataaGAgtcagg-catggtggctcatgcctgtaatcccagcacttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=65577.000000 s hg38.chr19_GL949748v2_alt 73139 36 + 1064304 gggaggctgaggcagagggatcacctgaggtcagga s panTro4.chr19 59006611 36 + 63644993 gggaggctgaggcagagggatcacctgaggtcagga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884613 36 + 60714840 gggaggctgaggcagagggatcacctgaggtcagga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646581 36 - 106955855 gggaggctgaggcagagggatcacctgaggtccgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932607 36 + 64156825 gggaggccaaggcagagggatcacctgaggtcagga i rheMac3.chr19 C 0 M 82 s papAnu2.chr19 47070082 36 + 51301725 gggaggccaaggcagagggatcacctgaggtcagga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45341733 36 + 49145316 gggaggtcaaggcagatggatcacctgaggtcaggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=177720.000000 s hg38.chr19_GL949748v2_alt 73175 140 + 1064304 gttccagaccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaaattatccgggcattgtggtgtgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcccttgaacccaggaggtgg--- s panTro4.chr19 59006647 140 + 63644993 gttccagaccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaaattatccgggcattgtggtgtgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcccttgaacccaggaggtgg--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884649 140 + 60714840 gctccagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccgggcattgtggtgtgtgcctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaacccaggaggtgg--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646617 140 - 106955855 gttccagaccagcctgaccaacatggtgaaaccctgtctctactaaaaataaaaaaattatccaggcattgtggtgtgtacctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaactcaggaggtgg--- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47070118 140 + 51301725 gttccagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattatctgggcactgtggtgcatgcctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaacccaggaggtgt--- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45341769 143 + 49145316 gtttcagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaactagctagacattgtggtgcgtgcctgtagtcccagctacgcgggaggctgaggcaggagaatcccttgaaccaaggaggcagagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59932643 82 + 64156825 M a score=110055.000000 s hg38.chr19_GL949748v2_alt 73315 91 + 1064304 ttgcagtgagccgagattgcaccactgcactccggcctgggcgacagagagaaactggtctcaaaataaataaataaataaataaa-------at-aaa s panTro4.chr19 59006787 95 + 63644993 ttgcagtgagccgagattgcaccactgcactctggcctgggcgacagagagaaactggtctcaaaataaataaataaataaataaata---aaat-aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884789 99 + 60714840 ttgcagtgagccgagactgcaccactgcactccggcctgagcgacagagagagactggtctcaaaataaataaataaataaataaataaataaataaaA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646757 79 - 106955855 ttgcagtgagccaagattgcaccactgcactctggcctgggcgacagag----actggtctctaaataagtaaataaata----------------aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932726 89 + 64156825 ttgcagtgagctgagatcgtaccactgcactccaacctgggcgacagag----ACTCATCTCaaaataaataaataaaataaaata-----aaat-aaa i rheMac3.chr19 M 82 I 10 s papAnu2.chr19 47070258 89 + 51301725 ttgcagtgagctgagatcgtaccactgcactccaacctgggcgacagag----actcatctcaaaataaataaataaaataaaata-----aaat-aaa i papAnu2.chr19 C 0 I 56 s calJac3.chr22 45341912 91 + 49145316 ttgcagtgagccaagactgtgccattgcactccagcctggacgacagagggagatctgtttcaaaaaaaaaaaaaaaaaaaaaaaa------aGT-AG- i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=92477.000000 s hg38.chr19_GL949748v2_alt 73406 115 + 1064304 taGGTAGAGATAGCTATA-GCGACACTGAAATATCTCCAAAAGAGTTtttgtttgtttgtttgtttgtttgtttttgaagtggagtcttgcac-tgtcacccaggctggagtgcagt s panTro4.chr19 59006882 111 + 63644993 taGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAAAGAGTTtttgtttgtttgtttgtttgttt----ttgaggtagagtcttgcac-tgtcacccaggctggagtgcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884888 115 + 60714840 TAGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAGAGAGTTtttgtttgtttgtttgtttgtttgtttttgaggtggagtcttgcac-tgtcacccaggctggagtgcagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646836 107 - 106955855 TAGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAGAGAGtttttgtttgtttgtttgttt--------ctgaggtggagtcttgcac-tgtcacccaggctgcagtgcagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932825 106 + 64156825 aAGGTAGAAATAGCTATA-GTGACATTGAAATATCTCCAAGAG-Gtttttgtttgtttttttgttt--------ttgagacggagtctcgccc-tgtcgcccaggctggagtgcagt i rheMac3.chr19 I 10 C 0 s calJac3.chr22 45342003 91 + 49145316 TATGTAAATACAGATATGTGTGTGGTTG----------CATGGAATTTTTTTTTTTTT----------------TTGATAAGGAGTTTTACTCTTATTTCCCAGGCTTGAGTGTAAT i calJac3.chr22 C 0 I 1511 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=19761.000000 s hg38.chr19_GL949748v2_alt 73521 30 + 1064304 ggcgcgatctcagcttactgcaa---------------------------cctctgc s panTro4.chr19 59006993 30 + 63644993 ggcgcgatctcagcttactgcaa---------------------------cctctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885003 30 + 60714840 ggcgtgatctcagcttactgcaa---------------------------cctctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646943 57 - 106955855 ggcacaatctcagcttactgcagggctgggattacctgttttacctcagctctctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932931 30 + 64156825 ggcacgatctcggctcactgcaa---------------------------cctccgc i rheMac3.chr19 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e calJac3.chr22 45342094 1511 + 49145316 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=9083.000000 s hg38.chr19_GL949748v2_alt 73551 9 + 1064304 ctcctgggt s panTro4.chr19 59007023 9 + 63644993 ctcctgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885033 9 + 60714840 ctcctgggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647000 9 - 106955855 ctcctgggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932961 9 + 64156825 ctcccaggt i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45343605 9 + 49145316 ctcccgacc i calJac3.chr22 I 1511 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=280323.000000 s hg38.chr19_GL949748v2_alt 73560 205 + 1064304 tcaagcgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacccggctaatttttttttttttttttttttttttttagtagagacggggtttcaccacattagccaggatgatctcgatc---tgaccttgtg--atccgcccgcctctgcctcccaaagtgctgggattacag--acgttggccattgcg s panTro4.chr19 59007032 205 + 63644993 tcaagcgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacccggctaatttttttttttttttttttttttttttagtagagacggggtttcaccacattagccaggatgatctcgatc---tgaccttgtg--atccgcccgcctctgcctcccaaagtgctgggattacag--acgttggccattgcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885042 204 + 60714840 tcaagtgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacctggctaa-tttttttttttttttttgtaatttttagtagagatggggtttcaccacattagccaggatggtctcgatc---tgaccttgtg--atccgcccacctctgcctcccaaagtgctgggattacag--acgttggccattgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647009 191 - 106955855 tcaagcgattctcttgcttcagcctcctgagtagctgggattacaggtgtgtcccaccacacctggctaatatatttt--------------tttttagtagagacggggtttcaccacgtt--ccaggatggtctccatc---tgacctcgtg--atctgcccgcctctgcctcccaaagtgctgggattacagacacgttggccattgcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932970 203 + 64156825 tcaagcgattctcctgcctcagcctcctgagtaactgggattacagacgcgtcccaccatatccggctaa-ttttttttttttttttttgt-tttttagtagagatggggtttcaccgtgttagccgggatggtcgcgatc---tgacttcatg--atccgcccgcctcggcctcccaaagtgctgggattacag--acatgagctactgtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070403 205 + 51301725 tcaagcgattctcctgcctcagcctcctgagtaactgggattacagacgcgtcccaccatgtccggctaatttttttttttttttttttgtatttttagtagagatggggtttcaccgtgttagccgggatggtctcgatc---tgacttcatg--atctgcccacctcggcctcccaaagtgctgggattacag--acatgagctactgtg i papAnu2.chr19 I 56 C 0 s calJac3.chr22 45343614 194 + 49145316 tcaggtgatctgcccgccttggcctccaaagt-gctcggattacaggcgtgagccaccacgcctggccA---------------TGTGtgtagtttcagtagagatggggtttcaccatgttgcccaggctggtctcagactcttgagctcaagccatccacccaccttgtcttcccaaagggctgggattacag--acgtgagccactatg i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=310651.000000 s hg38.chr19_GL949748v2_alt 73765 193 + 1064304 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgagat-ctcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtgacttgttctaggtcatatggtcacatataaatgaatacgatggtgaaactgaggtcctagcttaggc-- s panTro4.chr19 59007237 193 + 63644993 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgagat-ctcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtggcttgttcaaggtcatatggtcacatataaatgaatacgatagtgaaactgaggtcctagcttaggc-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885246 191 + 60714840 cccagccCAaga-tcctatttcttaagccct-gtactgtgtcaggctcagggttttgcacatgtgatttgatgaaat-ctcacagcggcccattttgccgagaaggaaatggagtcttagcaagctgtggcttgttcaaggtcatgtggt--catataaatgaatacgatggtgaaactgaggtcctagcttaggt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647200 191 - 106955855 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgaaat-ctcacagcggcccattttacagagaaggaaatgaagtcttagcaagctgtggcttgttcaaggtcatatggt--catatcaatgaatacgatggtaaaactgaggtcctagcttaggc-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933173 171 + 64156825 cccggtcCAaga-tcctatttcttaagccct-gcactgtgccaggctcagggttttgcacatatgatttgataaaat-ttcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtggcttgttcaaagt----------cgtataaatgaatacgatggtgaaactgaggc-------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070608 171 + 51301725 cccggtcCAAGA-TCCTATTTCTTAAGCCCT-GCACTGTGCCAGGCTCAGGGTTTTGCACATGTGATTTGATGAAAT-TTCACAgcggcccattttacagagaaggaaatggagtCTTAGCAAGCTGTGGCTTGTTCAAAGT----------CGTATAAATGAATACGATGGTGAAACTGAGGC-------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45343808 149 + 49145316 -ccggccCAAGA-TCCTGTTTCTTAAGCCCTGGCACAGTGCCAGGCTCAGGGTTTTGTACATGTGATTTTATGAAAT-TTCTCAGTGGCCCATTTTACAGAGAAGGAAATGGAGTCTTGGCACACTGTGGCTTATT--------------------------AATACGATAGTGAAGC-------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19575836 180 - 122678785 ccaagatcaagagtcccatgctctatggact-gagcta-gccaggcTCCTGG-TAtacatgggtgattttattaaatcctcacaatagcctatttcacagagaaggaaactgag---tagcaagtgatgctttgttcaaagt------------tgcaagtgaataatatggtgaaagtggggttctagcttagagat i canFam3.chr1 I 1653 C 0 e mm10.chr7 3612073 3275 + 145441459 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=163610.000000 s hg38.chr19_GL949748v2_alt 73958 58 + 1064304 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT s panTro4.chr19 59007430 58 + 63644993 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885437 58 + 60714840 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647391 58 - 106955855 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933344 58 + 64156825 ctctgcctcagaagttcctgctcttcagtactcACCTATAATGACCACTAAGgggaat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070779 58 + 51301725 CTCTGCCTCAGAAGTTCCTGCTCTTCAGTACTCACCTATAATGACCACTaaggggaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776044 58 + 50890351 CTCTGCCTCAGAAGTTCCTGCTCTTCAGTACTCACCTATAATGACCACTAAGGGGGGT i chlSab2.chr6 I 8 C 0 s calJac3.chr22 45343957 58 + 49145316 CTCTGCCTCTGAAGCGCCTGGCCTTCACTCCTCACCTATAATGGCCACTAAAGGGAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576016 58 - 122678785 ctttagttccaaagttcatggtctttactactcacctatcctgGTCACTAAagggagt i canFam3.chr1 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=526563.000000 s hg38.chr19_GL949748v2_alt 74016 185 + 1064304 --------GAGAAAA----GAAGGA--------------------AGGAATGGA-------------------------GGGAGGGAGGAAAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAAT----TGGAAAAGGGGTGTCAGCAACA-AAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGGAGGTTGAGGG s panTro4.chr19 59007488 185 + 63644993 --------Gagaaaa----gaagga--------------------aggaatgga-------------------------gggagggaggaaaataagaaTATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAAT----TGGAAAAGGGGTGTCAGCAACA-AAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGGAGGTTGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885495 190 + 60714840 --------Gagaaaagaaggaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCAACGTAAAGGAGAGTGGATGGGGTGG-CTACTCACCAGATGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647449 190 - 106955855 --------GAgaagagaaggaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCAACATAAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933402 190 + 64156825 --------gagaaaagaaggaagga--------------------atggaggga-------------------------gggagggaggaaaataaggaCTTCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070837 190 + 51301725 --------gagaaaagaaggaagga--------------------atggaggga-------------------------gggagggaggaaaataaggacttctgggatgggaTTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776102 210 + 50890351 --------GagaaaagaaggaaggaaggaaggaaggaaTggagggagggaggga-------------------------gggagggaggAAAATAAGGACTTCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344015 190 + 49145316 --------Gaggaaa----gaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGACATCGGGGATGGGATTGGGCACCACAATAAAATCTGAGTCGTTTTATGGAAAAGCAGTGTCAGCGACATGAAGGAGAGCGGAAGGGGTGG-CTACTCACCAGGTGGAGTGCTGTCCGTGTGACACAGAGGCCCTGTAGAAGGGGGAGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3615348 185 + 145441459 --------gaggaag----ggatgg--------------------aaggagaga-------------------------ggaagagaggggaatgagggaATCTGGGGTGAAGCTAGGCACAAAGATAAAA--TGAGTTGT----TGGAGGCGAGGTGTGAGCAGCATAGCATAGAGCAGGTGGAGTCTCCCACTCACCTGTTGGTGTGAAGTCAGCACGGCATGCAGGCCCTGCAGAAGGTGAAGAG i mm10.chr7 I 3275 I 4 s canFam3.chr1 19576074 186 - 122678785 aagatgagaaggaaagaaagggggg--------------------agaaagggaagaaaagatgtaagaagagaggagcgggagggagggaAATCTGGAAATCTGGGGTGAGCTTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAATGGGCTGTCAGTGGCTTACAGCTGAATGGCTGGGGGATATTACTCACCAGTTGGAGTGA-------------------------------------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=52770.000000 s hg38.chr19_GL949748v2_alt 74201 36 + 1064304 ACTAGtttc--------tttttcctttttttttttt-tgtctgag s panTro4.chr19 59007673 35 + 63644993 ACTAGtttc--------tttttcctttttttttttt--gtctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885685 27 + 60714840 ACTAGtttc----------------ttttttttttt--gtctaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647639 37 - 106955855 ACTAGttcc--------tttttttttttttttttttttgtctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933592 34 + 64156825 ACTAGTTCC---------tttttttttttttttttt--gtctgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071027 39 + 51301725 actagttcc----ttttttttttttttttttttttt--gtctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776312 32 + 50890351 ACTAGTTCC-----------tttttttttttttttt--gtctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344205 43 + 49145316 GCTAGTTCCTTCCttttttttttttttttttttttt--gtctgag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576260 8 - 122678785 -----------------------------------T--GTCTGAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=355346.000000 s hg38.chr19_GL949748v2_alt 74237 158 + 1064304 gcagactctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctccgtagtagctgggactacaagtgcccgccaccacaccaggctaatctttgtatttt s panTro4.chr19 59007708 158 + 63644993 gcagagtctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctccgtagtagctgggactacaagtgcccgccaccacaccaggctaatctttgtatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885712 158 + 60714840 acagagtctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattcccctgcctcagcctccgtagtagctgtgactacaagtgcccaccaccacaccaggctaatctttgtatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647676 158 - 106955855 acagagtctcactctgtcgcccaggctggcgtgtagtggtgtgatctcagctcaatgcaacctctgcctcccaggttcaagtgattctcttgccttagcctccatcatagctgggattacaagtgcccgccaccacaccgggctaattttggtatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933626 158 + 64156825 acagagtcttgctctgttgctcaggctggagtgtagtggtgcgatctcagctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccaggactacaggtgcccgccaccacactaggctaatttttgtatttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071066 158 + 51301725 acagagtcttgctctgttgcccaggctggagtgtagtggtgtgatctcagctcattgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccaggactacaggtgcccgccaccacactaggctaatttttgtatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776344 158 + 50890351 acagagtcttgctctgccgcccaggctggagtatagtggtgtgatcccagctcactgcaacttctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccgggactacagatgcccgccaccacaccagactaatttttgtatttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344248 158 + 49145316 aaggagtctcattctgtctcccaggctagaatgcaatggctcgatcttggctcactgcaacctctgcctcctgggttcaagtgattttcctgcctcaaccccccaagtagctgggactacaggtgcctgccaccacacccagctaatttttgtatttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e canFam3.chr1 19576268 0 - 122678785 C e macFas5.chr19 54942282 1 + 59248254 I a score=220726.000000 s hg38.chr19_GL949748v2_alt 74395 113 + 1064304 tagtagaga-ggggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatccacccgcc-tcgg-cctcccaaagtgctgggcctcggctcccacaggcatgag s panTro4.chr19 59007866 105 + 63644993 tagtagaga-ggggttttgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgacccgcccgcc-tcgg-cctcccaaagtgctgggatt--------acaggcatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885870 106 + 60714840 tagtagagatggggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatccgcctgcc-tctg-cctcccaaagtgctgggatt--------acaggcatgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647834 106 - 106955855 tagtagagatggggtttcgccatgttggtcaggctgatcttgaaatcctgacc-tcaggtgatccgcccgcc-tcgg-cctcccaaagtgccgggatt--------acaggcgtgag i nomLeu3.chr10 C 0 M 2603 s rheMac3.chr19 59933784 106 + 64156825 tagtagagacagagttttgccatgttggtcaggctgttcttgaactcctgtcc-tcaggtaatccgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggtgtgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071224 106 + 51301725 tagtagagacagggtttcgccatgttggtcaggctgttcttgaactcctgtcc-tcaggtgatccgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggcgtgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776502 106 + 50890351 tagtagagacagggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatctgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggcgtgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344406 108 + 49145316 tagtagagccagggtttcgccatattggtcaggctggtcttgaactcctggcctttgggtgatccaccccccttcag-cctcccaaagtgcagggatt--------acaggcgtgag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576268 58 - 122678785 ----TGACACAGAG----GCCCTGTAGATCA---------------------C-GGAGGGG----------C-TAAGTCTTTTCAAAGTTCTAGGCTT--------C---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=30122.000000 s hg38.chr19_GL949748v2_alt 74508 21 + 1064304 ccgctgcgcccAACAGCGAGT s panTro4.chr19 59007971 21 + 63644993 ccactgtgcccgacAGCGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885976 21 + 60714840 ccactgtgcccgacAGCGAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59933890 21 + 64156825 ccactgtgcctgacAGCGAGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071330 21 + 51301725 ccactgtgcccgacagCGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776608 21 + 50890351 ccactgtgcccAACAGCGAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344514 20 + 49145316 ccaccCAGCC-GGCAACTAGT i calJac3.chr22 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e canFam3.chr1 19576326 0 - 122678785 C e nomLeu3.chr10 102647940 2603 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=1172918.000000 s hg38.chr19_GL949748v2_alt 74529 623 + 1064304 TCTTTTCAAAACCCTTTGTGGCCAGCCCCATCTCATT--GGTAACCCAGGAATCTGAGTTCCCAGCTCCTATCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTTGGACATCCATTGCCCACCTACCGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCAACCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGAACAATGAT------CGTAGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATAAGAATCTGGGAGTCCTCCCTGTCTCCTGACCTCTTCCTGCCTCAAGAACCAGAGATACCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTCTGGGCCCCAGCCCTG-TTCTTTATTTGAACCTAGAATCCCAAACC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGC--CTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAGAAGAAAGGGGT-- s panTro4.chr19 59007992 623 + 63644993 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCATT--GGTAACCCAGGAATCTGAGTTCTCAGCTCCTATCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTTGGACATCCATTGCCCACCTACCGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGAACAATAAT------CGGAGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATGGGAATCTGGGAGTCCTCCCTGTCTCCTGCCCTCTTCCTGCCTCAAGAACCAGAGATACCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTGTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAACC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGC--CTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAAAAGAAAGGGGC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885997 631 + 60714840 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCATT--GGTAGCCCAGGAATCTGAGTCCCCAGCTCCTATCTCCCCTGGGAAATGAAAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTCAGACATCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAAGCCCTTGAACTCCACC-TTTCCAGGGAACAATAAT------CG-AGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCTCAGGGAATCAGGAGTCCTGGCTTCCATCCCCTTCCCACATGACAATCTAGGAGTCCTCCCTGTCTCCTGCCCTCTTCCTGCCTCAAGAGCTAGAGAGACCTGTCCCCACCTCCTTCCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTCTAGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAATC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGCCTCTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAGAAGAAAGGGGC-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59933911 623 + 64156825 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCCCAGCTCCTCTCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCCGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCGGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCTCCTCTCCTGGGTTCAGGAATCTGGGTCCCCATTTCCGTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCC--TTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGCGTCCTCCCTGTCCCCTATCCTCTTCCTGCCTCAAGATCCAGAGATACCTGTCCCCG-------CCTCCTTCCTCTTTCGAGAC-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTAGGTCTCCATTCTCTCTCTCTTTCTGCCCCCCACCCCATCCAGGAACCCAGGGAGAAGGAAGGGGC-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071351 625 + 51301725 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCCCAGCTCCTCTCTCCTCTGGGAAATGAGAATcttatccctccctcctcctgtctCCGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCGGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCtcctctcctgggttcaggaaTCTGGGTCCCCATTTCCGTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAAGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGAGTCCTCCCTGTCCCCTATCCTCTTCCTGCTTCAAGATCCAGAGATACCTGTCCCCG-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGGCCCTAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGggtctccattctctctctctttctgccccccaccccatcccggaacccagggagaaggaaggggc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776629 625 + 50890351 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCTCAGCTTCTCTCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCTTGTCTCAGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCTCCTCTCCTGGGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTTTCAGGAGCTAAAAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCGGGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGAGTCCTCCCTGTCCCCTATCCTCTTCCTGCCTCAAGATCCAGAGATATCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGACCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTCTCTCTCTCTTTCTGCCCCCCATCCCATCCAGGAACCCAGGGAGAAGGAAGGGGC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344534 627 + 49145316 TCCTTTCAAAGCCTTTTCTGGCCAGCCCCATCTCATT--GGTATCCCAGGAATCTGAGTCCCCCACTCCTCTCTCCTATGGGAAACAAGAATCTTATACCTCCCTCGTTCTGTCTC---AGGCAGAAATGCAAACTCCCATTACCCAGCAACTGAA-------AACGTCTGAACCCAGACCCCTCTGGCCTGGGAACCCAAGAGTTCAGGCCCTTGAACTCCCCC-TTTTCAGGAGACAGTGAT------CGAAGAGTTTCTCCTCTCCTG-GTTCAGGAATCTGAGTCTCCATTTCCCTGTTCTCTCAGGAGCTACGAGCTCTGTTCCCAGCCCCCTTTCACCAGGGAATTAGGAGTCCTGGCTTCCATCCCCATCCCGTGTGAGATTCTAGAAGTCCTCCCTGTCCGCTACCCTCTTCCTGCCTCAGGATCCAGAGAGACCTGTCCCCA-------TCTCCTTCCTCTTACGGGAA-------------TCTGTCTTCTCTTACTTTAGGACCCAGGGGTCTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCTCAAGCCCCCAGCTCGTGCTG-CTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATCGC--CTCTCTCTCTGCCCCCCACCCCAGCCAGGAACTCAGGGAGGAGGAAGGGGC-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3615537 496 + 145441459 TTTTTACAAAGCCCTTTGTGGACTACCGTCTCCCCTCTAAGGAGCCCTAGACTCTGATT-------------------------ACATGAAGCCTGCCACCGTCTTTTTTAGGATC---AAGCAAAACTCTGTACTTCCATTCCCCA--TACTTAA-------GAAG---------------CTGCTGTCTG---ACCCAAGAGGACAGGCCTCTGTTCCCCACC-TTTCCTAAGAACAATACTTTGCTCCTTGGGGTTTCTCTGCCTTGGGGTTTGAAGGTTTAGATGCCC--------CCTCCCTCCAGCAC-AGTAGACTTG---------CCCATTTACCATGAGAACTGAAT---------------------------ACATTCTTTGACCCCTAGATATCCCTTACTCTCCT-CTGCCTGGAGATCCAGAGAAACCTATGCTCA-------CCCCCGACC-----CAGCAA-------------TCTGTCTTCCCCCG-TTTAGGACTCAGGTATCTGGGTACCAGTCCTGATTCCTTTTTCTAAATTGGA-------------------TGTTGAAT---------------------------------------------------TCCATATG--AACAG--------------------------ATATAGCCCTCAGCCCAGCCAAGGATCCACACACAGGGGAGGGAC-- i mm10.chr7 I 4 C 0 s canFam3.chr1 19576326 597 - 122678785 TC-------------------CCAGCTTCACCTCACT--GCAAACCCAGGAATCTAAATC------------TTCCTCTGGGAAACAGGAATCTTACCCATATGTCCTCTT---TCAGTAGCCAGAACTGCAGGCTCTTAATCCCTGCCTACTTCATTAGTCTGAAGTCTGGCCCCAGCCCCCTCTTGCCTCTACACCC-AGTGTCCAGACCCCTGGACTCCACCTTTTCCAGGAGACAGTAATCTGAGCCC-ACAGTGTCTCCTCTCTGGGGTCCAGGAGTCTGGGTCCCCAGCTCCCTTCT------------------------------------TTCCCAGAGACCCAGGTCTTCTGGCTTCC-TCTTCTTCCCACATCAGAGTCTAGGATTC------------TACATTTGTCAT---------TCCCAAGAGTTCAGTCCTTA-----------------------GGAAGGAATTCAAGACCTCTGTGTTCTCCTGTGTTAGGACCCAAGGATCTGGGTCCT-GTCCCC-TTAT---TCTGGGTCTAGAATTCTGAACCCTCAGCTAGTGCTGTCTGACCATCCCGCACCTACCCTCAGAGGGACTCAGTAGCCCTCTTCCGTTCCCTCTCCCTGCTCAGAGTGTCCAGGTCCCCAGAGC--CTGTCTCTCTGCACCCAAG-CCAGCCTGGGACCCAGGGAGAAGGGGGAGGGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102647940 2603 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=807362.000000 s hg38.chr19_GL949748v2_alt 75152 271 + 1064304 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGATACCCGCTAG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAACCAGACCCAGATC-----CTCATTTACGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATGGCACTGTGGAAAAA-TTAGCAGGGGGTTCAGTCATAACCTGTGGTGTTCATTTATTTAACTCTAGAAACAAA s panTro4.chr19 59008615 258 + 63644993 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGACACCCGCTAG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAACCAGACCCAGATC-----CTCGTTTACGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCA-------------CTGTGGAAAAA-TTAGCAGGGGGTTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886628 277 + 60714840 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGTACCAGGGCCATGGTGGGCAAATGTTCGCTGG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGACCAGATACTCGTTTAGGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGTCCTGTGGCACTGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650544 272 - 106955855 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCATCAAGGCCATGGTGGGCAGCTATCCGCTGG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTTCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGATA-----CTCGTTTAGGGAAGTGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATGGCCCTGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTCATTTAACTCTAGAAACAAA i nomLeu3.chr10 M 2603 C 0 s rheMac3.chr19 59934534 272 + 64156825 AGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAATCAGGGCTTGGTTGCATCCTCTCCCCTCCCAGGAAATGAGGAAACATCAGAAAGCCAGACCCAGATC-----GTCGTTTAGGGAAGAGAGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGCGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071976 272 + 51301725 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAGTCAGGGCTTGGTTgcatcctctcccctcccaggaaatgaggaaacatcagaaagCCAGACCCAGATG-----GTCGTTTAGGGAAGAGGGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGCGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777254 272 + 50890351 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAATCAGGGCTTGGTTGCATCCTCTCCCCTCCCAGGAAATGAGGAAACATCAGAAAGCCAGACCCAGATC-----GTTGTTTAGGGAAGAGAGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGTGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345161 262 + 49145316 AGCTCACAGACGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGATATCC-CTGC------AGCTGCTGCCAGAGCTTGGCTG-------TTCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGAGC-----CCAGTTTAGGAAAGAGA--AGCGAGGTGGGGGCCTATGGGTCACTGTGTCATAGCCCCATGGCACCGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAGCTCTAGAAACAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3616033 255 + 145441459 AGCTCACAGAGAGTCGACAGCTGGAGTATCAGCGACAGGACCATGGTGGGCA-CTCTCCG-TGG------AGCTGAGGAAAAGG-TTGACCCTGCCTTTTTCACTCTGAGGAAATGAAGCAACACCAGAAAGCCATG-TGAGAGT-----CCTGTTTAGGGAACAGAGGAGTCAGGTGGAGGCTCCTGGGTAACTGTGTCATAGTTTCATTG--TCTTGGAAAAAGTTGCAAGATGGAACAGTCATAGCCTCTGGTGTTCTTTAATTTAACT----------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19576923 269 - 122678785 GGCTCACAGAGGATCAGCAGCTCAAGGATCAGCGCCAGAGCCATGGTGGTCAGATCTTGGCTGGAGCAGAAGCAGGAGCCAGGGCTCAGCCGTGCCCTCTCACTTCTCAGGAAAT---GCAATACCAGAAAGCCAGA------GC-----TCTGTTTAAGGAAGGGAGGAGGGAAGTGGGGGCCTCTGGGTGACTGTGTCACAGCCCCATGGTGCTGTGGAAAAGCCTGGGAGATGGGGCAGTCATAACCAGTTGTGTTCACTAATTAAACTTAAAAAAAAAA i canFam3.chr1 C 0 I 167 e macFas5.chr19 54942282 1 + 59248254 I a score=142386.000000 s hg38.chr19_GL949748v2_alt 75423 75 + 1064304 TActagtcaggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacagagcgaga s panTro4.chr19 59008873 75 + 63644993 TACTAGtcgggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacacagcgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886905 75 + 60714840 TActagtcggaaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaaaagcagcctgggcaacacagcgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650816 75 - 106955855 TACTAGtcgggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacacagcaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934806 67 + 64156825 TActagtcgggaggcggaggcaggagta-----tcgcttgagcccaagagt-----tcaagagcaggttgg--------gcggga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072248 67 + 51301725 TACTagtcaggaggcggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcttgg--------gcgaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777526 67 + 50890351 TActagtcgggaggcggaggcaggagga-----tcgcttgagccccagagt-----tcaagagcagcttgg--------gcgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345423 60 + 49145316 TACTCAttgggaggtggagatgggagga-----tcgcttgagtccaggagt-----tcaa---------------catggcgaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3616288 82 + 145441459 TAAAAGTTGG--GGAGGAGGGCTGAGGACGTTGTCGC-TAAGTAGAAGACCACTTGCCCAGAGTAGCCTCAGCACTGaggagaga i mm10.chr7 C 0 I 915 e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=23730.000000 s hg38.chr19_GL949748v2_alt 75498 10 + 1064304 ccctgtct-aa s panTro4.chr19 59008948 10 + 63644993 ccctgtct-aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886980 10 + 60714840 ccctgtct-aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650891 11 - 106955855 ccctgtctaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934873 10 + 64156825 ccctgtct-aa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072315 10 + 51301725 ccctgtct-aa i papAnu2.chr19 C 0 M 348 s chlSab2.chr6 46777593 10 + 50890351 ccctgtct-aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345483 10 + 49145316 ccctgtct-aa i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=151803.000000 s hg38.chr19_GL949748v2_alt 75508 101 + 1064304 aaaataaataaat----tgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----atagatagacagatagaaagataTCTGTC-----TGTTTTAA s panTro4.chr19 59008958 105 + 63644993 aaaataaataaataaattgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGACAGAAAGATATC-----TGTTTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886990 110 + 60714840 aaaataaataaataaattgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGATAGAAAGATATCTGTCTTGTTTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650902 106 - 106955855 aaaataaataaataaattgtgccactgcactctagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGAAAGATATCTGTC----TTGTTTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934883 99 + 64156825 aaaataaataaat----tttgccaccacactccagcctgggtgatagagtgagaccatgtcttcaaaT----ACAGACAGACAGACAGAAAGATATCTGTT-------TTTTAA i rheMac3.chr19 C 0 I 31 s chlSab2.chr6 46777603 103 + 50890351 aaaataaataaat----tgtgccaccacactccagcctgggtgatagagtgagaccatgtcttcaaatacagacagacagacagacagaaagaTATCTGTT-------TTTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345493 99 + 49145316 --aaaaaaaaaaT----TGTGCAACATCGCTCCAGCCTGAGTGATAGAGTGAGACCATGTCTTTAAAT----ATAGACAGACAGACAGAAAGATATCTGTC-----TGTTTTAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e papAnu2.chr19 47072325 348 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I a score=189487.000000 s hg38.chr19_GL949748v2_alt 75609 101 + 1064304 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGTCATTGATTGACAGATAGataaaaa-------tttgcacctattatgtgccaggcccttgctgTGATTGAAaga s panTro4.chr19 59009063 101 + 63644993 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGtcattgattgacagatagataaaaa-------ttcgcacctattatgtgccaggcccttgctgTGATTGAAaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887100 101 + 60714840 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGTGATTGATTGACAGATAGataaaaa-------ttagcacctattatgtgccaggcccttgctgTGATTGAAaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651008 101 - 106955855 AAATAAGAACCGAATATGTGCCAGACTCTTGCTGTGATTGATTGACAGATAGataaaaa-------ttagcacctattatgtgccaggcccttgctgTgatagataga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935013 97 + 64156825 AAAAAAGAACCTATTATGTGCCAGACTCTTGCTG----TGATTGATTGATAGAAAAAAA-------TTAGCACCTATTATGTGCCAGACCCTTGCTGTGATTGAAAGA i rheMac3.chr19 I 31 I 249 s papAnu2.chr19 47072673 97 + 51301725 aaattagcatctattatgtgccaggcctttgcta----tgatagatagatagataaaaa-------ttaGCACCTGTTAAGTGCCAGGCCCTTGCtgtgattgattga i papAnu2.chr19 M 348 C 0 s chlSab2.chr6 46777706 99 + 50890351 -----AAAACCTATTATGTGCCAGACCCTTGCTG----TGATTGAAAGAAAAAAAGAaaaaaaaatttagcatctattatgtgccaggcccttgctgTgataaataga i chlSab2.chr6 C 0 I 7 s calJac3.chr22 45345592 93 + 49145316 AAATAAGAACCTATAATATGCCAGACTATTGCTG----TGattgattgat----aaaaa-------ttagcacctatcatgtgccaggcccttgctgTgattgataga i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=-595.000000 s hg38.chr19_GL949748v2_alt 75710 34 + 1064304 tagatagatggatg--------------------------------gatggatagatagatagata s panTro4.chr19 59009164 34 + 63644993 tagatagatggata--------------------------------gatagatagatagatagata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887201 18 + 60714840 ta------------------------------------------------gatagatagatagata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651109 22 - 106955855 tagata--------------------------------------------gataggtagatagata i nomLeu3.chr10 C 0 I 36 s papAnu2.chr19 47072770 6 + 51301725 ------------------------------------------------------------tagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777812 66 + 50890351 tagatagataAAAATTagcatctattatgtgccaggcccttgctgTGATAGATAGACAGATAGATA i chlSab2.chr6 I 7 I 36 s calJac3.chr22 45345685 5 + 49145316 ------------------------------------------------------------tagat- i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935110 249 + 64156825 I a score=346188.000000 s hg38.chr19_GL949748v2_alt 75744 245 + 1064304 gatagatagatagataAAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGATGGAT------------A--------------------------------------------GATAAAAATTAACACCAA-TTATGTGCCAGGCCCTTGCTGtgattaattgatcgattgatagattggttgaCAG--AGAAAAATTAGCACCTATTATGTGCCAGGCTCTTGGTGTGATACTGTG----------------Ttagatagatagatagatagatagatagatagatagatagat-aAAAATTAGCCCCT s panTro4.chr19 59009198 237 + 63644993 gatagatagatagataAAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGATGGAT------------A--------------------------------------------GATTAAAATTAACACCAA-TTATGTTCCAGGCCCTTGCTGtgattaattgatcgattgatagattggttgaCAG--AGAAAAATTagcacctattatgtgccaggctcttgctgTGATACTGTg------------------------atagatagatagatagatagatagatagatagat-aAAAATTAGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887219 250 + 60714840 gatagatagatagataAAAATTagcacctattaagtgccaggcccttgctgTGATTGATTGATGGAT------------A--------------------------------------------GATAAAAATTAACACCAA------------GCCCTTGCTGTGATTAATTGATCAATTGATAGATTGGTTGACAG--ataaaaattagcacctattatgtgccaggctcttgctgtgatactgTgattgattgatagatagatagatagatagatagatagatagatagatagatagatagat-aAAAATTAGCACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651167 265 - 106955855 GATAGATAGATAGATAAAAATTAGCACCTATTAAGTGCCAGGCCCTTGCTGTGATTGATTGATAGAT------------AAGAATTAGCACCTATTAAGTGTCAGACCCTTGCTGTGATTGATGGATAGATAAAAACACCAA-TTATGTGCCAGTCCCTTGCTGTAattaattgatcgattgatagattggttgaCAG--ataaaaattagcacctattatgtgccaggctcttgctgTGATACTGTG----------------------------------------ATTGATTGATTGATTGAT-AAAAAGTAGCACCT i nomLeu3.chr10 I 36 C 0 s rheMac3.chr19 59935359 212 + 64156825 GATAGATAGATAGATAAAAATTAGCACCTGTTAAGTGCCAGGCCCTTG-TGTGATTGATTGAT----------------A--------------------------------------------GATAAAAATTAACACCAA-TTACGTGCCAGGCCCTTGCTGTGATTAATTGATC----GATAGATTGGTTGACAG--ataaaaattagcacctattatgtgccaggctcttgctgTGATACTGtg----------------------------------------attgattgattgattgat-tAAAATTAGCACCT i rheMac3.chr19 I 249 C 0 s papAnu2.chr19 47072776 144 + 51301725 -----------------aaATTAACACCAATTACGTGCCAGGCCCTTGCTGTGATTAATTGATCGATAGATTGGTTGACA--------------------------------------------GATAAAAAttagcaccta-ttatgtgccaggctcttGCTGTGATActgtgatt------------------------------------------------------------------------------------------------------------------gattgattgattgat-taaaaTTAGCACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777914 213 + 50890351 GATAGATAGATAGATACAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGAT----------------A--------------------------------------------GATAAAAATTAACACCAA-TTACGTGCCAGGCCCTTGCTGTGATTAATTGATC----GATAGATTGGTTGACAG--ATAAAAATTagcacctattatgtgccaggctcttgctgTGATACTGTG----------------------------------------ATTGATTGattgattgat-taaaattagcacct i chlSab2.chr6 I 36 C 0 s calJac3.chr22 45345690 231 + 49145316 gatagataaatagataAAAATTAGTGCCTATTAAGTGCCAGGCCCTTGCTGTGATTGATTGAC----------------A--------------------------------------------GATAAAAATGAGCACCAATTTATGTGGCAGGC-CTTGTTGTGATTGATTGATCGATTGATAAAATGATTGACAGGCATAAAAATTAGCACCTATTATGTACCAGGCCCTTGCTGTGATACTGTG----------------------------ATAGATAGATGGAT-GATTGATTGATAGATAAAAAATTCGCACCT i calJac3.chr22 C 0 I 71 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=467916.000000 s hg38.chr19_GL949748v2_alt 75989 279 + 1064304 CTAggccgggcgcggttgttcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgagatcgggaagttcgagaccagcctgaccaacatggagaaacccccgtctctcctaaaaa-agaaaaattagccggctgtggaggcgcgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaactcgggagtcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcgacagagctagact s panTro4.chr19 59009435 280 + 63644993 CTAggccgggcgcggttgctcacgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcgggaagttcgagaccagcctgaccaacatggagaaacccccgtctctcctaaaaacagaaaaattagtcgggtgtggaggcgcgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaactcgggagtcagaggttgctgtgagccgagatcgcgccattgcacttcagcctgggcgacagagctagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887469 279 + 60714840 ATAggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggaagttccagaccagcctgaccaacgtggagaaa-ccccgtctctactaaacatagaaaaattagccgggtgtggaggcgcgcacctgtaatcccagcgattcaggaggctgaggcaggagaatcgcttgaacccgggagttggaggttgctgtaagccgagataacaccattgcactccagcctgggggacagagctagact i ponAbe2.chr19 C 0 I 25 s nomLeu3.chr10 102651432 279 - 106955855 ATAggccgggcacggtggctcacgcctgtaatcctagcactttgggaggccgaggggggcggatcacctgaggtcgggaagttcgagaccagcctgaccaacatggagaaa-ccccatctctactaaaaatagaaaaattagctgggtgtggaggcacgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcaacagagctagact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935571 269 + 64156825 ATAggccgggctcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgagggcgggaagttggagaccagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtgtaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgctgtgagccgagatcgtgccagtgcactccagcctgggggact---------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072920 267 + 51301725 ATAGgccggg--cggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggaagttggagaccagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtggaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgctgtgagccgagatcgcgccagtgcactccagcctgggcgact---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778127 269 + 50890351 ataggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggattacctgaggtagggaagttggagactagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtggaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgcagtgagccgagatcgcgccagtgcactccagcctgggcgact---------- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e calJac3.chr22 45345921 71 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=25798.000000 s hg38.chr19_GL949748v2_alt 76268 21 + 1064304 caatctcagaagaaaaaaaaa s panTro4.chr19 59009715 21 + 63644993 caatctcagaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102651711 21 - 106955855 cagtctcaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 M 520 s rheMac3.chr19 59935840 21 + 64156825 cagtctcaggaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073187 21 + 51301725 cagtctcagaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778396 21 + 50890351 cagtctcagaaagaaaaaaaa i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=93320.000000 s hg38.chr19_GL949748v2_alt 76289 112 + 1064304 aa-----aaTTAGAACCTATTACGTGCCAGACCCTCGCtgtgccatgttggcaggcacagagggaactcagactccgttactgctctcaagcagcagctaccagtccgactgaaaga s panTro4.chr19 59009736 117 + 63644993 aagaaaaaaTTAGCACCTATTACGTGCCAGACCCTCGCtgtgccatgttggcaggcacagagggaactcagactccgttactgctctcaagcagcagctaccagtccgactgaaaga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59935861 112 + 64156825 -----aaGATTagcacctattacgtggcagaccctcgctgtgcgatgttggcaggcacagagggcactcagactccattactgctctcaagcagctgctaccagtccgactgacaga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073208 111 + 51301725 -----aagattagcaccTATTACGTGGCAGACCCTCGCTGTGCGATGTTGGCAGGCACAGAGGGAACTCAGACT-CGTTACTGCTCTCAAGCAGCTGCTACCAGTCCGACTGACAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778417 112 + 50890351 -----aagattaggacctattacgtggcagaccctcgctgtgcgatgttggcaggcacagagggaactcagactccgttactgctctcaagcagctgctaccagtccgactgacaga i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e nomLeu3.chr10 102651732 520 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=4927.000000 s hg38.chr19_GL949748v2_alt 76401 57 + 1064304 ccaagaccaggtcagtttcctttttttttgagacggagtctcgctctgtcgcccagg s panTro4.chr19 59009853 56 + 63644993 ccaagaccaggtcagtttc-tttttttttgagacggagtctcgctctgtcgcccagg i panTro4.chr19 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e nomLeu3.chr10 102651732 520 - 106955855 M e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=68100.000000 s hg38.chr19_GL949748v2_alt 76458 252 + 1064304 ctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgccttagcctccccagtagctgggactacgggcgcccaccaccacgcccggctaatttgtgttgtatttttaagtagagacagggtttcaccatgttagccaggatggtctagatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc s panTro4.chr19 59009909 252 + 63644993 ctggagtgcagtggtgtgatctctgctcactgcaagctccgcctccggggttcacgccattctcctgccttagcctccccagtagctgggactacgggcgcccaccaccacgcccggctaatttgtgttgtatttttaagtagagacagggtttcaccatgttagccaggatggtctagatctcctgatctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652253 252 - 106955855 ctggagtgcagtggtgtgatctctgctcactgcaagctccgccttccgggttcacgccattctcctgcctcagcctccccagtagctgggactacagtcgcccaccaccactcccggctaatttgtgttgtatttgtaagtacagacagggtttcaccatgttagccaggatggtctagatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacggctccc i nomLeu3.chr10 M 520 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=807.000000 s hg38.chr19_GL949748v2_alt 76710 2 + 1064304 gg s panTro4.chr19 59010161 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652505 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45345992 2 + 49145316 ga i calJac3.chr22 I 71 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=57113.000000 s hg38.chr19_GL949748v2_alt 76712 31 + 1064304 cccagaccaggtcagtttcttaagtgatctg s panTro4.chr19 59010163 31 + 63644993 cccagaccagatcagtttcttaagtgatctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652507 31 - 106955855 ccCAGACCAGGTCAGTTTCttaagtgatctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935973 31 + 64156825 cccagaccaggtcagtttcttcagtgatctg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073319 31 + 51301725 CCCAGACCAGGTCAGTTTCTTAAGTGATCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778529 31 + 50890351 cccagaccaggtcagtttcttaagtgatctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345994 31 + 49145316 ctcagaccaggtcagtttgttcagtgatctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=563141.000000 s hg38.chr19_GL949748v2_alt 76743 265 + 1064304 agctataatggcggtaaca--gagcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagccgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccgggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGGGGACTATTTTGTTCCGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA s panTro4.chr19 59010194 265 + 63644993 agctataatggcggtaaca--gagcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagccgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccgggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGGGGACTATTTTGTTCCGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652538 261 - 106955855 agctataatggcggtaaca--gggcact----tagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccaggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGAGGACTATTTTGTTCTGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936004 264 + 64156825 agctacactggcggtaaca--gggcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcgaaggaAAggttagtcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTCATACATAAACTATAAAATGAGGATTATTTTGTTCCGCCTTAGGT-GGTCTCAGTAGGAGGACTAG-----TCACCCCGGAGCGACTTCTAGGCAGAGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073350 264 + 51301725 AGCTATAATGGCGGTAACA--GGGCACTGTGAGAGCCCGCAGAAAGCTCCTAACCCATCTGGGATGAGACCTAGCGCTTCCAGGACGAGCTGATGTTGAGCTGAGA--CCTCGAAGGAAAGGTTAGTCATTCACCTTCTCCcgggctcagtttcttcatctgtaaaatgggctttcATACATAAACTATAAAATGAGGACTATTTTGTTCCGCCTTAGGT-GGTCTCAGTAGGAGGACTAG-----TCACCCCGGAGCGACTTCTAGGCAGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778560 264 + 50890351 agctatactggcggtaaca--gggcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcaaaggaAAggttagtcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTTATACATAAACTATAAAATGAGGACTATTTTGTTCCTCCTTAGGT-GGTCTCAGTAGGAGGTCTAG-----TCACCGCAGAACGACTTCTAGGCAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346025 264 + 49145316 agccatactggcggttaca--gggcactgtgagagcccacagaaggctcctaagccatctgcgatgagacctagcgcttccaggatgagctgatcttgagctgagaggcctcaaagggcaggttaatcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTCATGCATAAACTATAAAATGGGAACTATTTTGTTCTGCCTTAAGTGGATCGCAGCAGGA---CCAG-----TCACTCCGGACCGACTTCAAGGCTGAGA i calJac3.chr22 C 0 I 386 s canFam3.chr1 19577359 271 - 122678785 agctaca-tggaggtcacatgtggcactgagagagtccacagaaggcccctaaccctcctgggatgagacttaaagcttccaggatgaactgattttgagctgaga--cctcaaaggatagctaagttatctgtcctctcccagcctccgcttcttcatctgtgaaatgggCTTTCATGAGTCAACTCTAAAATGAGGACTATTGCATTCCGCCTTGGATGAGTCGCAGCTGCAGGACTGGGAGTACTCCTCAGGCACGACTCCTAGGCGGAGA i canFam3.chr1 I 167 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=750.000000 s hg38.chr19_GL949748v2_alt 77008 1 + 1064304 C s panTro4.chr19 59010459 1 + 63644993 C i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652799 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936268 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073614 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778824 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19577630 1 - 122678785 C i canFam3.chr1 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45346289 386 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=222584.000000 s hg38.chr19_GL949748v2_alt 77009 135 + 1064304 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGACACCACTTCC-TTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCGAGTGCGCACGCGCAGGCTCCGAAAGCGGGCCGTCGCACAGAG s panTro4.chr19 59010460 135 + 63644993 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGACACCACTTCC-TTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCGAGTGCGCACGCGCAGGCTCCGAAAGCGGGCCGTCGCCCAGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652800 136 - 106955855 TAAGGAGGTTC-CACGCAGGTCCGCAAAGTCAGGCTTACGCTTGCTCCTGACACTACTTCCTTTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCAAGTGCGCACGCGCAGGCTCCGAAAGCGGAACCTCGCACAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936269 133 + 64156825 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCTTGGCACTACTTCC-TTTACCTCTGCTGCTCG--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGACTCCGAAAGCGGTACCTTGCACGG-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073615 135 + 51301725 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGGCACTACTTCC-TTTACCTCCGCGGCTCC--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGAAGCCGAAAGCGGTACCTTGCACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778825 135 + 50890351 TAAGGAGATTC-CACGCAGGTCCGCAAAGCCAGGCTTGCGCTTGCTCTTGGTACTACTTCG-TTTACCTCGGCGGCTCC--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGACTCCGACAGCGGTACCTTGCACAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346675 133 + 49145316 TAAGGAGATCC-CACGCAGGTGCGCAAA--CAGGATTGCGCTTGCTCCCGGGACCACGTCC-TTTACCACCGCTGCCTC--ATCTTGGTTCTGCGCTAGTGCGCACGCGCAGACTCTGACAGCAGCGCCTCGCGCAGAG i calJac3.chr22 I 386 C 0 s canFam3.chr1 19577631 110 - 122678785 -----AGATTTGCACTTAAATTCGCAGTGC--------CGCCTGCT------------TTC-TTTGCC---GCGGATTCTGACAGTTGTCCTGCTCCAGTGCGCGCGTGCGGACTCAGGCTGCGGGGGCTCGAGCGCGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=1139465.000000 s hg38.chr19_GL949748v2_alt 77144 537 + 1064304 GGACCACAACTCCCAGAGTGCTCCGCGTCCTTGCTTTCGCCTC------TACTTGTGCTCCAGGGCGCACGCGCAGCCCTGGGAGCGGGTTCTCGCGC----ATAGGGACCACAACTCCCAGGGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCGGAGACAAAGATGGCTGCGAGTAAGTGCAGGTTCCGGTGGCGCACGGGGCTCGGGTAGTTCTGGGAACCTCTGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGAACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTTCTTG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC s panTro4.chr19 59010595 537 + 63644993 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCGCCTC------TACTTCTGCTCCAGGGCGCACGCGCAGCCCGGGGAGCGGGTTCTCGCGC----ACAGGGACCACAACTCCCAGGGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCCGAGACCAAGATGGCTGCGAGTAAGTGCAGGTGCCGGTGGCGCGCGGGGCTCGGGTAGTTCTGGGAACCTCTGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTCCTTG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CCAGGCGCAAACTTGCATCGTCCA-----CAC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652936 537 - 106955855 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTTTCCTC------CACTTCTGCTCCAGGGCGCACGCGCAGCCCGGGGAGCGGTTTCTCGCGC----ATAAGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCCGAGACCAAGATGGCTGCGAGTAAGTGCAGGTGCCGGTGGCGCGCGGGGCTCGGGTAGTTTCGGGAACCTCCGGGCGGTCCGGGGACTGAGGTGCGTCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTCCTCG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CTAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCTCCCTCCATCCCTCCATCTTGTACCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936402 433 + 64156825 --------------------------------------------------------------------------------------------------------AGGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCCGGTGTCGCCGCC---GAGACCAAGATGGCTGCGAGTAA------GTGCCGGTGGCGCGCGGGGCTC-GGTGGTACCGGGAACCTCCGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACGGGGGGCAGCCACTTGCAGGGGTGACTCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTTGTCATCGGGGGCCTCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073750 527 + 51301725 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCTTGTC------CACTTCTGCTCCAGGGCGCACGCGCAACCCGGGGAGGGGTTTCTCGCGC----GTAGGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCAGGTGTCGCCGCC---GAGACCAAGATGGCTGCGAGTAA------GTGCCGGTGGCGCGCGGGGCTC-GGTGGTACCGGGAACCTCCGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCATGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACGGGGGGCAGCCACTTGCAGGGGTGACCCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTTAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTCGTCATCGGGGGCGTCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778960 533 + 50890351 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCGCCTC------CACTTCTGCTTCAGGGCGCACGCGCAACCCGGGGAGGGGTTTCTCGCGC----ATAGGGACCACAACTCCCAGAGTGCCCCGCGTCCT------CGCCGGTGTCGCCGCC---GAGACCAAGATGGCTGCCAGTAAGTGCAGGTGCCGGTGGCGCGGGGGGCTC-GGTGGTACCGGGAACCTCCGGGCAGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGATTAGAGGTCACGGGGCGCAGCCACTTGCAGGGGTGACCCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTCAAGAATGTCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTCGTCATCGGGGGCATCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346808 518 + 49145316 GGACCACAACTCCCAGGGTGCTCCGCGTCCTGGCTTTCGCCTC------CACCTCTGCTCCAGGACGCGCGCGCGACCAGGGGAG-----TCTCGCGC------AGAGACCACAACTTCCAGAGTGCTTCGCGTGCT------CTCCGGTGTCGCCGCCGCCGAGACCAAGATGGCCGCAAGTAAGTGCAGGTGTCGGTGGCGCGCGGGGCTC----------GGGAATCTCCAGGCGGTCCTGGGACTAAGGTGTAGTGGGAAAGTGGTGGAGGCGATGTGGTCCGTGCTGGAG-GGGGAGGCAGAAGCTACGAGGGGGCTCCTCCAGGGCA-GGGTGGCACGAGAGGGTTAGAGGTCACTGGGGGCAGCCCCTTGCAGGGGTGACCCTCCTCG-CCACTCCTGCAGGACTCGGCGCCTTCCTCAAGAATGCTTGGGCCAAGGAGCCAGTACTGGTCGTGTCCTTCTTCATCGGGACCCTCGGTGCGTGAGT-CT--CCAGGCGCAAACTTGCATCATCCA-----CCC-----------CTGTCCCTCCACATCGCTCCATCTTGTACCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3617285 491 + 145441459 GAACTACAACTCCCGAAAGGGTCCACGTCCTCG-------------------------------------------CCCAAGGGGCGGGGCCTCACGCAAGGAGAAGGACCACAACTCCCAGAGAGCTCCGC-TCCT------------TGTCGCCGCC---AAGAACAAGATGGCCGGGAGTAAGTACAGGTTT--GGAGCTCGCGGGGATCAAGTAGTTCCAGGAAACTGTGGGCTGATCCGTGGCTGAGTCTCAGTGGAGCCTTGGGGACCG----GTAATCCGTCCCAGAATAGGGGCGCGGCAGTCACGAGGGTG------CAGAGCAGGGGTGATACGAGAGTGTTAGAGGTCACC----GCAGTAGTCCCCAAGGGTGACTGTCTTC--TCACCTCTCTAGGAATCTCTGCCTTCCTCAAGAATGCCTGGGCGAAGGAGCCGGTGCTGGTGGTGTCCTTCTCTGTCTGGGGCCTCGGTGAGTGCCCCCTTCCCCGGCGCGAAAGTGCATCCTCCA-----CCCGGAAGTCATCAGCATTCCACGGCACAGTTTCATCTCGCATCCC i mm10.chr7 I 915 I 1422 s canFam3.chr1 19577741 541 - 122678785 GGACCACAACTCCCAGAGTGCTTCGCGTCCTCGCCACAGCCCCGGGCCGCAGTTCTGTGCCAGTGCGCATGCGCA-CTCAGATTGCGGAGCCTCGGGC----GCGGGAACCACAATTCCCAGAGTGCTCCGGCCGCTTgctgccgccgccgccgccgccgccgAGACCAAGATGGCCGGGAGTAAGTGAGGGCGCCCGCGGCGCGCTGGGTCC-GCTGGTTCCCGGAGCCCC--GGTGGTGCCGGTGCTGGGGCACGGCGGAGCCTCCGTGCAGGCGGTGGGGGCAGGGCCACAG-GGGGGCGCCGAGATCACGAGAGGGCTCCTCCGGGGCGGGGGTGGCGCGAGAGGGTTAGAGGTCACCGGAGGC-GTCCCCTGCAGGAATGACCCTCCTCGCCCTCCCCTCCAGGACTCGCCGCCTTCCTCAAGGATGCCTGGGCCAAAGAGCCGGTGCTGGTCGCGTCCTTCACCATCGGGGGCCTCGGTGCGTGAGCGTG--C--AGCGC-------CCTCACCCAAGGTCCCG-----------TCGCTCCCCACTAGCGCTCTGCCCTGTACCCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=74006.000000 s hg38.chr19_GL949748v2_alt 77681 48 + 1064304 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC s panTro4.chr19 59011132 48 + 63644993 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102653473 48 - 106955855 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC i nomLeu3.chr10 C 0 I 1335 s rheMac3.chr19 59936835 48 + 64156825 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074277 48 + 51301725 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779493 48 + 50890351 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45347326 23 + 49145316 -AAAGCCCTATCGCCGTCCTCGAG------------------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578282 35 - 122678785 -----------CAACGTTCTAGGGCCCCCTC--GTGTGTCTGCACCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=411484.000000 s hg38.chr19_GL949748v2_alt 77729 356 + 1064304 CACGGCATCCCCTTATCTATCCCCATACCCATTATAACCTCTCCACCATCGCCCCCCGCGT------TCC----TCTCCACCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcctt---aacacctgagcaccaaaaa-aaagtccagatcctcc---tcctccttttcatctttcctctc------ccccattctgaatt--gagttggcttgggtggaggtgggactggggaatctgtgtcttgtg-aaaatccccgtatgatcccaatgt---gccttgctgattgaaaatctctgCCCTCTGCCCTGGAACTGCCCTACTCACACTTTAATTAGCACCGGAGTTCC-TG--CAGGGATGGG s panTro4.chr19 59011180 349 + 63644993 CACGGCATCCCCTTATCTATCCCCATACCCATTATAACCTCTCCACCATCGCCCCCCGCGT------TCC----TCTCCACCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcctt---aacacctgagcaccaaaaa-aaagtccagatcctcc---tcctccttttcatctttcctctc------ccccattctgaatt--gagttggcttgggtggaggtgggactggggaatctgtgtcttgtg-aaaatccccgtatgatcccaatgt---gccttgctgattgaaaat-------ctctgCCCTGGAACTGCGCTACTCACACTTTAATTAGCACCGGAGTTCC-TG--TAGGGATGGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59936883 360 + 64156825 CGCGACATCCCCTTGTCTATCCCCATACCCATTATAACGCCTCCACCG---CCCCCCGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaatcctgcttatgcattagcaacacctgagcaccaaaaataaagtccagatcctcc---ttctccctttcatctcccctctc------ccacattctgaatt--gagttggtttggttggtggtggggctgggaaatctgtgtcttgtg-aaaatccccctatgatcctaatgtgtcgtcttgctgattgaaaaccTCAGCCCTCTGCCCTGGAACTGTGCTGCTTACACCTTAATTAGCACCGCAGTCCC-TG--CACGGATGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074325 349 + 51301725 CACGAC------------ATCCCCATACCCATTATAACGTCCCCACCGc--ccccccGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAATCCCTCTAAATGAGACGTTCTCAACCCTGCTTATGCGTTAGCAACACCTGAGCACCAAAAATAAAGTCCagatcctcc---tcctccctttcatCTCCCCTCTC------CCACATTCTGAATT--GAGTTGGTTTGGTTGGTGGTGGGGCTGGGGAATCTGTGTCTTGAG-AAAATCCCCCTATGATCCTAATGTGTCGTCTTGCTGATTGAAAACCTCAGCCCTCTGCCCTGGAACTGTGCTACTCACACCTTAATTAGCACCGCAGTTCC-TG--CAGGGatggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779541 360 + 50890351 CACGACATCCCCTTGTCTATCCCCATACCCATTATAACGTCTCCACCG---CCCCCCGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcattagcaacacctgagcaccaaaaataaagtccagatcctcc---tcctccctttcatctcccctctc------ccacattctgaatt--tagttggcttggttggaggtggggctggggaatctgtgtcttgtg-aaaatccccctatgatcctaatgtgtcgtcttgctgattgaaaaccTCAGCCCTCTACCCTGGAACTGTGCTACTCACACCTTAATTAGCACCGCAGTTCC-TG--CAGGGATGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45347349 344 + 49145316 -------TCCCCTTGTCTATCCCCATACCCTTTGTAACCTCTCCACCATC-GCCCCCGCGT------TCC----TCTCCATCTACCCAACACGCTCTTAACCCCCCTAAATGAGACGTTCTCAACCCTACTTATGCATC---AACACCTGAGCACCAAAAATAAAGTCCAGATCCTCCTCTTCCTCCCTTTCAGCTCCCCTCTC------C--Tattctgaatt--gaattggcttggctggaggttgggctggggaatctgcgtcttgtgaaaaatccccctattatcctaacgt---gccttccaga-tgaaaac-------ctttgTTGTGGAACTCTGCTGTTCACATTTTAATTAGCACCGGAGTTCCTTG--TAGGGGTGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578317 320 - 122678785 -------------------GCCCCACCCCCACTATTAGGACCACCCTGTACACACCTACCTGGGAGGTCCATGACCCTCCCCCACCCCACCCACCC-----CACCCTCAGGGCGAggttctcagccctggctgtgcatt-----------------aaaaacacGGTCAGAATCCTACCACTCCTCACCCTTgcccccccccccgccccgccccACACTAAGCTTGGAGTGGGGTGGGGTGGAGGTGGGGCTGGGGAATCTCCG----GTG-AAAAGCCTCTTCCGCGCT---------GCCTT---GACTGACAGC-------TTCTGTTCTAGAGCAGGGCTGCTCAGACTTTAAC--GTGCGGGAGGTCT-TGTTCAAGGGCAGG i canFam3.chr1 C 0 I 307 e mm10.chr7 3617776 1422 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=149268.000000 s hg38.chr19_GL949748v2_alt 78085 164 + 1064304 GGCGGGGGATTGTTAAAATGTAGC------------------ttttttttttgcgatggagtctca--ctctcacccaggctgaagtgcagtggcgcgatcccggctcactgcaacctcggcctcctgggttcaagggattctcctgcctcagcctcccgagtagctgggattacaggcgcCCA s panTro4.chr19 59011529 182 + 63644993 GGCGGGGGATTGTTAAAATGTAGCGCttttttttttttttttttttttttttgcgatggagtctca--ctctcacccaggctgaagtgcagtggcgcgatcccggctcactgcaacctcggcctcctgggttcaagggattctcctgcctcagcctcccgagtagctgggattacaggcgcCCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59937243 160 + 64156825 GCC------------------------tttttgtttgtttggtttttttttggagacagagtctcgccctgtcacccaggctgatgtgcagtgaggcgatcccagctcactgcaaactcagcctcccgggttcaagggattcccctgcctcagcctctcgagtagctggggctacaggcgccca i rheMac3.chr19 C 0 I 158 s papAnu2.chr19 47074674 148 + 51301725 gcc------------------------ttttt----------ttttttcttggagatggagtctca--ctgtcacccgggctgatgtgcagtgacgcgatcccggctcactgcaaactcagcctcccgggttcgagggattcccctgcctcagcctctcgagtagctgggagtacaggcgccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779901 155 + 50890351 GCC------------------------tttttttttttt---tctttttttggagatggagtctca--ctgtcacccaggctgatgtgcagtgacgcgatcccagctcactgcaaactcagcctcccgggatcaagggattcccctgcctcagcttctggaatagctgggactacaggcgccca i chlSab2.chr6 C 0 I 160 s calJac3.chr22 45347693 176 + 49145316 GGCGGGGGATTGTTAAAATGTAGtttgtttttggtttttcttttttcttttggaaacatagtctta--ctgtcactcaggctga-----aatgacgccat-ctggctcactgcaacctccgcttcctgggttcaagggatttttctgcctcagcctcctgagtagctgggatgacagacacCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=56234.000000 s hg38.chr19_GL949748v2_alt 78249 289 + 1064304 GCTAAttttttgtttttgtttt--------------tgagactgagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcagtgcaagccccgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgcccccatgcccggctaattttttgtatgttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctaacctc--gtgatcctcccaactcggtctcccaaagtgctgggattacaggcgtgag s panTro4.chr19 59011711 289 + 63644993 GCTAAttttttgtttttgtttt--------------tgagactgagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgcaagccccgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgcccccatgcccggctaattttttgtatgttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatcctcccaactcggcctcccaaagtgctgggattacaggcgtgag i panTro4.chr19 C 0 C 0 s calJac3.chr22 45347869 292 + 49145316 TCTAATTttttctttctttctttttttttattttcctgctatgcagtttccctctgtcttccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctttggggttcaagtgattctcctatctcagccttttgagtaagtgagattacaggcactca---ccacgtctggctaatttttt-tatttttagtagagacaggatttcgccatgttggccaggctggtctggaactcctgacctcaagtgatccac---------tttcccaaagtgctgagattataggcatgag i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e papAnu2.chr19 47074822 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=5755.000000 s hg38.chr19_GL949748v2_alt 78538 17 + 1064304 ccaccgcgcccggccAG s panTro4.chr19 59012000 17 + 63644993 tcaccatgcccggccAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47074822 17 + 51301725 ccaccacgcctggctaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45348161 17 + 49145316 ccactgggccaagccag i calJac3.chr22 C 0 I 1353 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=4450.000000 s hg38.chr19_GL949748v2_alt 78555 42 + 1064304 Cttttttttttttttttttttgagatggcgtctcgctctgtc s panTro4.chr19 59012017 37 + 63644993 C-----tttttttttttttttgagatggcatctcgctctgtc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47074839 40 + 51301725 t--ttttttgtatttttagtagagacagggtttcgccgtgtt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=27544.000000 s hg38.chr19_GL949748v2_alt 78597 103 + 1064304 ttccaggctacagtgcaatggtttgatcatggctcactgcaacctccgcctctagggttcaagtgattctcctgcctccgcctcccaagta---------------------gctgggattaca s panTro4.chr19 59012054 103 + 63644993 ttccaggctagagtgcaatggtttgatcatggctcactgcaacctccgcctccagggttcaagtgattctcctgcctccgccacccaagca---------------------gctgggattata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887773 103 + 60714840 ttccaggctagagtgcaatggtttgatcatggctcactgtaacctccgcttacagggttcaagtgattttcctccctcagcctcccaagta---------------------gctgggattaca i ponAbe2.chr19 I 25 C 0 s papAnu2.chr19 47074879 91 + 51301725 -----agccaggatg----gtcttgatc--------tcctgacctc----------------gtgatccgccctcctctgcctcccaagtgctgggtgGGCCACTGCTCacccctgggattaca i papAnu2.chr19 C 0 I 5 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=4123.000000 s hg38.chr19_GL949748v2_alt 78700 7 + 1064304 ggcgagc s panTro4.chr19 59012157 7 + 63644993 ggcgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887876 7 + 60714840 ggcgggc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59937561 7 + 64156825 ggcaagt i rheMac3.chr19 I 158 C 0 s papAnu2.chr19 47074975 7 + 51301725 ggcacgt i papAnu2.chr19 I 5 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=924732.000000 s hg38.chr19_GL949748v2_alt 78707 752 + 1064304 accaccacgcccggctaatttttgtatttttagtagagacaaggtttcaccatgttggccaggctggtcttg-aactcctg-accgcaagtgatctgccttcccaaagtgct-gggattacaggggtg-agccactgcgcccggccaaactgtaggttct-gattctgtaggtctgggg-tggggcatgggattctgcatttttgaagagttcccaggtcttgtcagtactgctggtccaccagccaGGCACTAGGTTAAGGTTCTGAACACTtattcagtatggcagccaccagccacaactggccactgagcatttgaagtggtgctggtatgaattgaggtggtataagac--actggatttcaaaaacttagtataacagagtgtgtaaactaccaataatcttttgttgattacatggcgaagtgatgttttggatgtactatggttttttttgttt---gtttgtttttgtttttttgagacggagtttcgcttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacctggct--gtttttgtattttcagtagagacggggtttcatcatattggtcaggctggtctcgaactcctgacctcaggtgatccacccgtctcagcctcctaaagtcctgggattataggcatgagccacctcgcccatcca s panTro4.chr19 59012164 755 + 63644993 accaccacgcccggctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtcttg-aactcctg-accgcaagtgatctgccttcccaaagtgct-gggattacaggggtg-agccactgcgcccggccaaactgtaggttct-gattctgtaggtctgagg-tggggcatgggattctgcatttttgaagagttcccaggtcttgtcagtactgctggtccaccagccaGGCACTAGGTTAAGGTTCTGAACACTtattcagtatggcagccaccaaccacacctggccactgagcatttgaagtggtgctggtatgaattgaggtggtgtaagac--actggatttcaaaaacttagtataacagagtgtataaactaccaataatcttttgttgattacatgtcgaagtgatgttttggatgtactatggtTttttttttttttggtttgtttttgtttttttgagacggagtttcgcttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacccggct--gtttttgtatttttagtagagacggggtttcatcatattggtcaggctggtctcgaactcctgacctcaagtgatccacccgtctcagcctcctaaagtcctgggattataggcatgagccacctcgcccatcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887883 759 + 60714840 accaccacgcccggctaatttttgtatttttagtagagacagggtttcaccgtgttggccaggctggtcttgaaactcctgaaccgcaagtgatctgccttcccaaagtgctggggattacaggggtgaagccactgcgcctggccaaactgtaggttct-gattctgtaggtctggggatggggcatgggattctgcattttttaagagttcccaggtcttgtcagtactgctggcccaccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcagtatggcagccaccagccacatgtggccactgagcacttgaagtggggctggtatgaattaaggtggtataagac--actggatttcaaaaactcagtataacagagtgtgtaaactaccaataatcttttgttgattacatgttgaagtgatgttttggatgtaccatgttttttttttttt--ggtttggttttgtttttttgagacggaatttcacttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacccggctaagtttttgtatttttagtagagatggggtttcatcatattggtcaggctggtctcgaactcctgacttcaggtgatccacccgtctcggcctcctaaagtcctgggattataggcatgagctacctcgcccatcca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59937568 751 + 64156825 accaccacgcctggctaatttttgtgtttttagtagagatgaagtttcaccatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-gggattactggagtg-agccactgcgcccggccaaactgtgggttctcgattctgtaggtctggga-tggggcatgggattctgcatttttgaagagttgccaggtcttgtcagtactgttggtccgccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcgatctggcagccaccagccacacctggccactgagcacttgaaatgaggctggtatgcattgaggtggtataagacatactggatttcaaacacttagtataactaagtatgtaaactaccaatcgtcttttgttgattacatgttgaagtgatg-tttggatataccatggtttttttt------ggtctgtttttgtttttttgagacggagttttactttcgtctaggctggagtgcaatggcctgatctcaactcactgcaacctctgcctcccggggtcaagcgattctcctgtctcagcctcctgggtagctgggattacaggtgcacgccactacacc-agctaattttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgatctcaggtgatccacccgcctcagcctcctaaaatcctgggattacaggcgttagccacctcacccagcca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074982 750 + 51301725 gccaccacgcctggctaatttttgtatttttagtagagatgaagtttcaccatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-ggggttaccggagtg-agccactgcgcccggccaaactgtgggttct-gattctgtaggtctgggg-tggggcatGGGATTCTGCATTTTTGAAGAGTTGCCAGGTCTTGTAAGTACTGTTGGTCCACCAGCCAGGCACTAGG-TAAGGTTCTGAACGCTTGTTCAATCTGGCAGCCACCAGCCATACCTGGCCACTGAGCACTTGAAGTGAGGCTGGTATGAATTGAGGTGGTATAAGACACACTGGATTTCAAACACTTAGTATAACTAAGTGTGTAAACTACCAGTCGTCTTttgttgattacatgttgaagtGATG-TTTGGATATACCATggtttttttt------ggtctgtttttgtttttttgagacggagttttactttcgtctaggctggagtgcaatggcctgatctcaactcactgcaacctctgcctcccgggttcaagcgattctcctgtctcagcctcctgggtagctgggattacaggcgcacgccactacact-ggctaatcttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcctaaaatcttgggattacaggcgttagccacctcacccagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780216 751 + 50890351 accaccacgcctggctaatttttgtatttttagtagagatgaagtttcactatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-gggattaccggagtg-agccactgcgcctggccaaactgtgggttct-gattctgtaggtctgggg-tggggcatgggattctgcatttttgaagagttgccaggtcttgtcagtactgttggtccaccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcgatctggcagccaccagccacacctggccactgagcacttgaagtgaggctggtatgaattgaggtggtataagacacactggatttcaaacacctagtataactaagtgtgtaaactaccaatcgtcttttgttgattacatgttgaagtcatg-tttggatataccatgggttttttt------ggtctgtttttgtttttttgagacggagttttgctttcgtctaggctggagtgcgatgacctgatctcaactcactgcaacctctgcctcccaggttcaagcgattctcctgtctcagcctcctgggtagctgggattacaggcgcatgccaccacacctggctaattttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcctaaaatcttgggattacaggcgttagccacctcacccagcca i chlSab2.chr6 I 160 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=13755.000000 s hg38.chr19_GL949748v2_alt 79459 7 + 1064304 agtatgt s panTro4.chr19 59012919 7 + 63644993 agtatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888642 7 + 60714840 agtatgt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938319 7 + 64156825 agtatgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075732 7 + 51301725 agtatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780967 7 + 50890351 agtatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349531 7 + 49145316 agtatgt i calJac3.chr22 I 1353 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=372991.000000 s hg38.chr19_GL949748v2_alt 79466 206 + 1064304 ttcttaaaatttgtttcatctgtatctcttatttttactgtagctactagaagatataaaattatatacctggctcttac-catctgtcagacagcactgGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGACTCCTGGCTCCCACC-------------------------------------------------CTAAATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC s panTro4.chr19 59012926 202 + 63644993 ttcttaaaatttgtttcatctgtatcttttatttttactgtggctactagaagatataaaattatatacctggctcTTAC-CATCTGT----CAGCACTGGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGACTCCTGGCTCCCACC-------------------------------------------------CTAAATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888649 206 + 60714840 ttcttaaaatttgttttatctgtatcttttatttttactgtggctactagaagatataaaattatatacctggctcttac-catctgtcagacagcactgGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGATTCCTGGCTCCCACT-------------------------------------------------CTAGATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938326 208 + 64156825 ttcttaaaatttgtttcatctatatc--tcatttttactgtggctactaaaagatataaaattatatacctgggtcttac-catctgtcagacagtgctgGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCCGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGATGGACTGTGACTTGTCAGTGACTGTTGTTTGTCCAAACCTTTCTTCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075739 208 + 51301725 ttcttaaaatttgtttcatCTATATC--TTATTTTTACTGTGGCTACtagaagatataaaattatatacctGGCTCTTAC-CATCTGTCAGATAGTGCTGGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCTGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGATGGACTGTGACCTGTCAGTGACTGTTGTTTGTGCAAACCTTTCTCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780974 204 + 50890351 ttcttaaaatttgttttatctgtatc--ttatttttactgtgcctactagaagatataaaattatatacctggctcTTAC-CATCTGTC----AGTGCTGGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCCGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGGTGGACTGTGACCTGTCAGTGACTGTTGTTTGTGCAAACCTTTCTCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349538 250 + 49145316 ttcttaaaatttgtttcatctgtatcttttatttt---------tactagaagatacaaaattatatacctggctcTTAC-CATCTGTCAGACCTTTCGGGCCTAGAACAATCCTTTTATGTACTG----TGCCCCGTCCCCCAGGACTCTTGGCTCCCACTGAGTGGACTGTGACTCCTTAGTGGCTGTTCTTTGGACTCTTGGCTCCCACTGAGTGGACTGTGACCCCTTAGTGGCTGTTGTTTGTACAACCCTTTCTCCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578944 196 - 122678785 tttttaaaa----actcatttgtatcttttattttta-tgtgcctgttagaaggtgtgaaactaaatatgtggctcttatgtttctgctggacagtgctgGCCTAGAACATTCTTTTTACCCCCCACCCCTGCCCTACTCCCTGAGACTCCTGGTGCCCACC-------------------------------------------------CTAGGTGGACTGTGATTTCTGAG--------------ACAACCCTTCCTTTCC i canFam3.chr1 I 307 I 4 e mm10.chr7 3617776 1422 + 145441459 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=22779.000000 s hg38.chr19_GL949748v2_alt 79672 16 + 1064304 CAGTTTGTAAGGCttt s panTro4.chr19 59013128 16 + 63644993 CAGTTTGTAAGtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888855 16 + 60714840 CAGTTTGTAAGtcttt i ponAbe2.chr19 C 0 I 686 s rheMac3.chr19 59938534 16 + 64156825 CAGTTTGTAACAGTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075947 16 + 51301725 CAGTTTGTAACAGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781178 16 + 50890351 CAGTTTGTAACAGttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349788 16 + 49145316 CAGTTTGTAACAGtct i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=1179.000000 s hg38.chr19_GL949748v2_alt 79688 1 + 1064304 t s panTro4.chr19 59013144 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889557 1 + 60714840 t i ponAbe2.chr19 I 686 C 0 s rheMac3.chr19 59938550 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075963 1 + 51301725 T i papAnu2.chr19 C 0 I 21 s chlSab2.chr6 46781194 1 + 50890351 t i chlSab2.chr6 C 0 I 5 s calJac3.chr22 45349804 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=21417.000000 s hg38.chr19_GL949748v2_alt 79689 13 + 1064304 tttttttttt---ttt s panTro4.chr19 59013145 13 + 63644993 tttttttttt---ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889558 13 + 60714840 tttttttttt---ttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938551 12 + 64156825 -TTTTTTTTT---TTT i rheMac3.chr19 C 0 I 661 s macFas5.chr19 54942283 15 + 59248254 -tttctttttgggttt i macFas5.chr19 I 1 I 1 s papAnu2.chr19 47075985 12 + 51301725 -ttttttttt---ttt i papAnu2.chr19 I 21 C 0 s chlSab2.chr6 46781200 9 + 50890351 -ttttttttt------ i chlSab2.chr6 I 5 I 3 s calJac3.chr22 45349805 13 + 49145316 tttttttttt---ttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I a score=438068.000000 s hg38.chr19_GL949748v2_alt 79702 286 + 1064304 tttggtgatggagtctctctctgttgcccaggctggagtgcaatggcacaatctgggctcactgcaacctctgcctcccaggctcaagggattcttctgcctcagcctcctgagtagctgggattacaggctcctgccaccacgcccggctaattttcgtatctttagtagagatggggtttcat----catgttgtccaggctggtcgcgaactcctgacctcaggtgatccgcccacattggccgcccaaagtgctgggattacaggcttgagccactgtgcccggcc s panTro4.chr19 59013158 282 + 63644993 ----gtgatggagtctctctctgttgcccgggctggagtgcaatggcacaatctgggctcactgcaacctctgcctcccaggctcaagggattcttctgcctcagcctcccgagtagctgggattacagcctcctgccaccacgcccggctaatttttgtatctttagtagagatggggtttcat----catgttgtccaggctggtcgcgaactcctgacctcaggtgatccgcccacattggccgcccaaagtgctgggattacaggcgtgagccactgtgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889571 286 + 60714840 tttggggacggagtctctctctgttgcccaggctggagtgcaatggcacaatctgggcttactgcaacctctgcctcccaggttcaagggattcttctgcctcagcctcctgagtagctgggattacaggcttctgccaccacacccggctaatttttgtgcctttagtagagatggggtttcat----cacgttgtccaggttggttgtgaactcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccacggtgcccagcc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54942299 284 + 59248254 --tttagacagagtctcactctgtcgcccaggctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcaaatttttgcatttttagtagagtcagggtttcac----tatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttatcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47075997 282 + 51301725 ttttgcgacagagt----ctctgttgcccaggccagagtgcagtggcacaatgtgggctcactgcaacctctgcctcccaggctcaagggattctcctgcctcagcctgctgaggagctgagattacaggctcctgccgccatgccaggctaatttttgtatctttagtagagatggggattcat----catgttgtccaggctggtcgtgaactcctgacctcaggtgatctgcccacctttgcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781212 282 + 50890351 gtttgcgacagagt----ctctgttgcccaggctggagtgcagtggcacaatgtgggctcactgcaacctctgcctcccaggctcaagggattctcctgcctcagcctgctgaggagctgagattacaggctcctgccgccatgcccggctaatttttgtatctttagtagagatggggattcat----catgttgtccaggctggtcgtgaactcctgacctcaggtgatctgcccacctttgcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45349818 280 + 49145316 ---tgagatggaat----ctgtgtcacccaggctggagtgcagtggcacgatctgggctcactgcagcctcaacctcccaggctcaaggg--tctcctgcctcagcctcctgaatagctgggattataggcgcc-accaccacatgcagctaattttttagtttttagtagagatggggtttcattcaccatgttggtcaggcaggtctcgaactcctgacctcaggtgatctgcccaccttgggctctcaaagcactgggattacaggcgtgagccaccgcgtccagcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e rheMac3.chr19 59938563 661 + 64156825 I a score=5096.000000 s hg38.chr19_GL949748v2_alt 79988 3 + 1064304 AAA s panTro4.chr19 59013440 3 + 63644993 AAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889857 3 + 60714840 AAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102654856 3 - 106955855 AAA i nomLeu3.chr10 I 1335 C 0 s macFas5.chr19 54942583 3 + 59248254 AAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076279 3 + 51301725 aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781494 3 + 50890351 AAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350098 1 + 49145316 --G i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e rheMac3.chr19 59938563 661 + 64156825 I a score=205892.000000 s hg38.chr19_GL949748v2_alt 79991 113 + 1064304 TTTGTAACAG-TCTTGATTTCTCCAGAACAGTCCCATGACACTA-CCCCCA---------GGATGCTCCATGATGA-CCCTACACTCAA-ACGTGCTCATTCCATGACCAACCCCACTGCTGCCTC- s panTro4.chr19 59013443 113 + 63644993 TTTGTAACAG-TCTTGATTTCTCCAGAATAGTCCCATGACACTA-CCCCCA---------GGATGCTCCATGATGA-CCCTACACTCAA-ACGTGCTCATTCCATGACCAACCCCACTGCTGCCTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889860 112 + 60714840 TTTGTAACAG-TCTTGATTTCTCCAGAATA-CCCCATGACACTACCCCCCA---------GGATGCTCCATGATGACCCCTACACTCAA-AC-TGCCCATT-CACAAACAACCCCACCGCTGCCTC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102654859 114 - 106955855 TTTGTAACAG-TCTTGATTTCTCCGGAATAGTCCCATGACACTA-CTGCCA---------GGATGCTCCATGATGACCCCTACACTTAT-ACGCACTCATTCCATGACCAACCCCACTGCTCCCTC- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942586 115 + 59248254 TGTGTAACAG-TCTTAATTTCTCCAGAATAGTCCCATGACACTA-CCCACA---------GGATGCTCCATGATGACCCCTACACTCAAAACGTACTCATTCCACGACCAACCCCAGTGCTTCCTC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076282 115 + 51301725 tgtgTAACAG-TCTTAATTTCTCCAGAATAGTCCCATGACACTA-CCCACA---------GGATGCTCCATGATGACCCCTACACTCAAAACGTACTCATTCCACGACCAACCCCAGTGCTTCCTC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781497 80 + 50890351 TGTGTAACAG-TCTTAATTT---------------------------------------------CTCCATGATGACCCCTGCACTCAATATGTACTCATTCCACAACCAACCCCAGTGCTTCCTC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350099 107 + 49145316 TTTGTAACAA-TCTTGATTTCTAAGGAACAGTCCCATGACACCA-CCCCCA---------GGATGCTCCGTGATGAACGCTA--------ATGCACTCATTCCATGACCAACCCCACTGCTCCCTC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19579144 123 - 122678785 TTTGTAACAGTTCATGATTCCACTGGAAGATCCCCAAACCATTC-CTCTCACCCACTACCTTGTGCTCCCTGACCACCTCTACACTC---ATGCCCTCATTCTGTGACCACCCCCATGTCTTCCCTC i canFam3.chr1 I 4 C 0 e mm10.chr7 3617776 1422 + 145441459 I e rheMac3.chr19 59938563 661 + 64156825 I a score=98133.000000 s hg38.chr19_GL949748v2_alt 80104 47 + 1064304 ---------CTCCAGGCCCCACGTATCTGTGAGTGTTAGGCTCCAACCCCTA------CCTC s panTro4.chr19 59013556 47 + 63644993 ---------CTCTAGGCCCCACGTATCTGTGAGTGTTAGCCTCCCACCCCTA------CCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889972 45 + 60714840 ---------CTCTA-GCCCCATGTATCTGTGAACGTGAGGCTCC-ACCCCTA------CCTC i ponAbe2.chr19 C 0 I 51 s nomLeu3.chr10 102654973 46 - 106955855 ---------CTCTAGGCCCCAT-TATCTGTGAGTGTTAGGCTCCCACCCCTA------CCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942701 47 + 59248254 ---------CTCTAGGCCCCATGTATCTGTGAGTGTTAGACTCCTACCCCTA------CCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076397 47 + 51301725 ---------CTCTAGGCCCCCTGTATCTGTGAGTGTTAGACTCCCACCCCTA------CCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781577 47 + 50890351 ---------CTCTAGGCCGCATGTATCTGTGAGTGTTAGACTCCCACCCCTA------CCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350206 43 + 49145316 ---------TTCTAGGCCCCATGTATCTGT----GTTGGGCTCCCACCCCTA------ACTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619198 53 + 145441459 ---------CTTTGGACCTCATGTGTTCCTGAGTGCTTGTCTCCAACCTCTATGCTATTCTC i mm10.chr7 I 1422 C 0 s canFam3.chr1 19579267 34 - 122678785 CTCTGTGCCCTCTAGGTCCCAT-------------------TCCCGCTCCGT------C--- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59938563 661 + 64156825 I a score=13733.000000 s hg38.chr19_GL949748v2_alt 80151 6 + 1064304 CACTTA s panTro4.chr19 59013603 6 + 63644993 CACTTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655019 6 - 106955855 CACTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942748 6 + 59248254 CACTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076444 6 + 51301725 CACTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781624 6 + 50890351 CACTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350249 6 + 49145316 CACTTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619251 4 + 145441459 CACT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579301 6 - 122678785 CACTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890017 51 + 60714840 I e rheMac3.chr19 59938563 661 + 64156825 I a score=147495.000000 s hg38.chr19_GL949748v2_alt 80157 71 + 1064304 ACCCCCCAAAAAAGAGTTTTAAACCCTCCT-GTCTATAAGTAGGGATCCCAAGGTACCAAG-GATCCTCCTGG s panTro4.chr19 59013609 71 + 63644993 ACCCCCCAAAAAAGAGTTTTAAACCCTCCT-GTCTATAAGTAGGGATCCCAAGGTACCAAG-GATCCTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55890068 72 + 60714840 ACCCCACAAAAAAGAGTTTTAAATCCTCCTAGTCTATAAGTAGGGATCCC-AGGTACCAAGCGATCCTCCTGG i ponAbe2.chr19 I 51 M 933 s nomLeu3.chr10 102655025 71 - 106955855 ACCCCCCAAAGAAGAGTTTTAAACCCTCCT-GTCTGTAAGTAGGAATCCCGAGGTACCAAG-GATCCTCCTGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942754 69 + 59248254 ACCCCCCGA--AAGAGTTTTAAGCCCTCCT-GTCTATAAGTAGGGATCTCAGGGTACCAAG-GATCCTCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076450 69 + 51301725 ACCCCCCGA--AAGAGTTTTAAGCCCTCCT-GTCTATAAGTAGGGATCCCAGGGTACCAAG-GATCCTCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781630 69 + 50890351 ACCCCCGAA--AAGAGTTTTAAGTCCTCTT-GTCTATAAGTAGGGATCCCAGGGTACCAAG-GATCCTCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350255 70 + 49145316 ACCCCCCAAAAAAGAGTTTTAAACTCTCCT-ATCTAGAA-TAGGGATCCCAAGGTACCAAG-GATCTTCCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3619255 60 + 145441459 ----CTCAG------GATTTACACTGACCC-AGGT-TAAGTGGGGATGGTTGAGTGCTGAG-GACCCACCAAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19579307 36 - 122678785 ------------------------------------TAAGTGGGGATCTCAGAATGCCATG-GGGTTTCCTGG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59938563 661 + 64156825 I a score=47600.000000 s hg38.chr19_GL949748v2_alt 80228 47 + 1064304 ACGTGCTGGCCCTCCCTGCTGCCCT-CCCCCTGCGCACTTTATCTTCC s panTro4.chr19 59013680 47 + 63644993 ACGTGCTGGCCCTCTCTACTGCCCT-CCCGCTTCGCACTTTATCTTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655096 47 - 106955855 AGGTGCTGGCCCTCCCTGCTGCCCT-CCCCCTTCGCACTTTATCTTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942823 39 + 59248254 ------AGGCCCTCCCCGCTGCCCT-CCCGCTTTGCAGTTTATCTT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076519 39 + 51301725 ------AGGCCCTCCCCGCTGCCCT-CCCGCTTTGCAGTTTATCTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781699 39 + 50890351 ------AGGCCCTCCCCGCAGCCCT-CCCGCTTTGCAGTTTATCTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350325 35 + 49145316 AGGTGCTGGCCCTCCCC-------------CTTTGCACTTTATCTTCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619315 36 + 145441459 ------GGGCCCTACTGGTTGTGCTGGCCTTTTCTCGCTCCC------ i mm10.chr7 C 0 C 0 s canFam3.chr1 19579343 47 - 122678785 AGGGGCAGGACCTCCCCGCTCCCCT-CCTCCTAAGTACCTGACTCCTA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59938563 661 + 64156825 I a score=771947.000000 s hg38.chr19_GL949748v2_alt 80275 293 + 1064304 CTTTGCCAAGGCTCACCTTCT---CTTCCCCTCTCTTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCCCCGGAATAGGCCCAGCCTCCCTGTGCTGGCGTAA---------GGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCCGGACCCCCC---GTTCCATTTTTT s panTro4.chr19 59013727 294 + 63644993 CTTTGCCAAGGCTCAGCTTCT---CTTCCCCTCTCCTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCCCCGGAATAGGCCCAGCCTCCCTGTGCTGGGGTAA---------GGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCTGGACCCCCC--TGTTCCATTTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655143 293 - 106955855 CTTTGCCAAGGCTCAGCTTCT---CTTCCCCTCTCCTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGCCATGATCAACAGGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCGCTGGCATAGGCCCAGCCTCCCTGGGCTGGGGTAA---------CGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCTGGACCCCCC---ATTCCATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939224 295 + 64156825 CTTTGCCAAGGCTCAGATTCT---CTTTCCCTCTCCTC---AGAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCCG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CCGTTCCATTTTTT i rheMac3.chr19 I 661 C 0 s macFas5.chr19 54942862 292 + 59248254 ---TGCCAAGGCTCAGATTCT---CTTTCCCTCTCCTC---AGAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCCG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CTGTTCCATTTTTT i macFas5.chr19 C 0 I 319 s papAnu2.chr19 47076558 290 + 51301725 ---TGCCAAGGCTCagattct---ctttccctctcctc---agaGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATACTTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCAG--------------GCAGGGATCGCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTTCCC---GTTCCATTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781738 292 + 50890351 ---TGCCAAGGCTCAGATTCC---CTTCCCCTCTCCTC---AAAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCGCATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCAG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CTGTTCCATTATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350360 288 + 49145316 CTTTGCCAAGGCTCAGCCTCT---CTTCCCCTCTCCTC-AGAGAGCTGCCTTCCCCTGGGCCTCACACCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCAATCAGCCCCTACTTCAAGTACTCTGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTAAGTGGGGGCCCT--------------GCAGGGAT-----------------GCACCCTGTGCTGGGGCGGGGTGGGGCCGGGCTGGTATGGGTGGGTCTTTCCTAAGCAGGGGTCAGACAT--AGCAGTGCTGCCTGTACTCCCCCCTGCTCAACTTTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3619351 212 + 145441459 TTTTGCCAGGGCTTTTTCTAC---CCTTTCCCCACCCCTGGAGAGCTACTTCATCCTGGGGT---CTTTTGTCTTTCTCCACAGCTATAATTATGCCCATGATTAGCCCCTACACCAAGTATGCTAGCATGATCAACAAGGCCACACCCTACAACTACCCAGGTGAGCAGGGA-----------------------------------------------CCTGTGTTGGGGGGA---------GGGC------------------------CAGACATCTG------TGTAGGAGAGTCCTTA--------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579390 299 - 122678785 GTTTGCTGAGGTTCAGCTTCTGCCCCTCCCCTGTCCTG---AAAGCCACCTTCCCCTGGGCCTCACCC----GTCTCTCCACAGCTGTGATTCTGCCCATCTTCAGTCCCTTCACCAAATATGCCACCATGATCAACCAGGCCACACCCTACAACTATCCAGGTGAGTGGGAGCTGGAGGGCTGGCCCAAAGCAGGGGT-GGAGGGTGAGGAGGGACCTTCCTGCGCTGGGGGAG---------GAATAATCATGGGTAGGTTCTTCCTCAGCAAGGATCTGAGAACCTGCTGTATGGACTGGACTTTCT---------TTTTTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=60685.000000 s hg38.chr19_GL949748v2_alt 80568 25 + 1064304 AAGAATTGAGATATAATTCGTATAC s panTro4.chr19 59014021 25 + 63644993 AAGAATTGAGATATAATTCGTATAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655436 25 - 106955855 AAGAATTGAGATATAATTCGTATAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939519 25 + 64156825 AAGAATTGAGATATAATTCGTATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943473 25 + 59248254 aagaaTTGAGATATAATTCGTATCC i macFas5.chr19 I 319 C 0 s papAnu2.chr19 47076848 25 + 51301725 AAGAATTGAGATATAATTAGTGTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782030 25 + 50890351 AAGAATTGAGCTATAATTCGTATAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350648 25 + 49145316 AGGAATTGAGCTCCAATTCCTATAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619563 25 + 145441459 ATGCATTGAAATGTTCTTTGTCCAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19579689 19 - 122678785 ------TGAGATCTGATCCATGTGC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=19457.000000 s hg38.chr19_GL949748v2_alt 80593 11 + 1064304 TATTCTGTGTT s panTro4.chr19 59014046 11 + 63644993 TAGTCTGTGTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655461 11 - 106955855 TATTCTGTGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939544 11 + 64156825 TATTCTGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943498 11 + 59248254 TATTCTGTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076873 11 + 51301725 TATTCTGTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782055 11 + 50890351 TATTCTGTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350673 9 + 49145316 TGCTCTGTT-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3619588 11 + 145441459 GCTTttttttt i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M a score=1207.000000 s hg38.chr19_GL949748v2_alt 80604 9 + 1064304 ---TGTGCT-----TCG s panTro4.chr19 59014057 9 + 63644993 ---TGTGCT-----TCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655472 14 - 106955855 ---TGTGCTTTCAGTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939555 9 + 64156825 ---TGTGCT-----TCG i rheMac3.chr19 C 0 I 15 s mm10.chr7 3619599 9 + 145441459 tcctttcct-------- i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C a score=27502.000000 s hg38.chr19_GL949748v2_alt 80613 132 + 1064304 ---t-ttttgtttttttgg----gtttttttgagacagagtctcgctctgtcgccaaggctggagtgcagtggcgcgatctcagctcactgcaagctc--------------------------------agcctcccgagtagctgggactacaggtgcccgccaccacga s panTro4.chr19 59014066 132 + 63644993 ---t-ttttgtttttttgg----gtttttttgagacagagtctcgctctgtcgccaaggctggagtgcagtggcgcgatctcagctcactgcaagctc--------------------------------agcctcccgagtagctgggactacaggtgcccgccaccacga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655486 169 - 106955855 ---TGttttgttttttttgttttttttttttgagacagaattttgctctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaagctccgcctcctgggttcacaccattctcctgccttagcctcccaagtagctgggactacaggcacccgccaccacga i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619608 71 + 145441459 tttc-ttttcttttcttttttcttttcttttgagatagggtttctctgtgtagccctggctg----------------------------------tc----------------------------------------------ctgtaact-------------------- i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=4172.000000 s hg38.chr19_GL949748v2_alt 80745 45 + 1064304 cacgcaaactttttcgtatttttttagtagaggcggggtttcacc s panTro4.chr19 59014198 43 + 63644993 catgcaaattttttcgta--tttttagtagaggcggggtttcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655655 43 - 106955855 ccagctaatttttttgta--tttttagtagagacggagtttcacc i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619679 11 + 145441459 --------------------cacttagtaga-------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579708 32 - 122678785 CATAAAAATCATTTCCTGTCTGTTT-------------TTGCACT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=34764.000000 s hg38.chr19_GL949748v2_alt 80790 98 + 1064304 gtgttagccaggattgtctcgatctcctgaccttgtgatccactcacctcggcctcccaaagtgctgggattacaggtgtgagccaccg-cgcctggcc s panTro4.chr19 59014241 98 + 63644993 gtgttagccaggatggtctcgatctcctgaccttgtgatccactcacctcggcctcccaaagtgctgggattacaggcgtgagccactg-cgcctggcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655698 98 - 106955855 atattagccaggatgctctcgatctcctgaccttgtgatccactcgcctcggcctcccaaagtgctgggattacaggcgtgagccaccg-cgcctggcc i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619690 84 + 145441459 -------ccaggctggccttgaactca-------gaaatccacctgcctctgcctccc-aagtgctgggattgaaggggtgcaccaccaccgcccagtt i mm10.chr7 C 0 C 0 e canFam3.chr1 19579740 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=6636.000000 s hg38.chr19_GL949748v2_alt 80888 5 + 1064304 TGTGC----- s panTro4.chr19 59014339 5 + 63644993 TGTGC----- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655796 5 - 106955855 TGTGC----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54943509 5 + 59248254 TGTGC----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076884 5 + 51301725 TGGGC----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782066 5 + 50890351 TGTGC----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350682 5 + 49145316 TGTGC----- i calJac3.chr22 C 0 C 0 s mm10.chr7 3619774 10 + 145441459 TGTCCACACT i mm10.chr7 C 0 C 0 e canFam3.chr1 19579740 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59939564 15 + 64156825 I a score=65229.000000 s hg38.chr19_GL949748v2_alt 80893 37 + 1064304 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTGTCTCTC s panTro4.chr19 59014344 37 + 63644993 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTATCTCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655801 37 - 106955855 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTGTCCCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54943514 21 + 59248254 TTCGAGTTTCTATTAC-----CTTTC---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076889 37 + 51301725 TTCGAGTTGCTATTAC-----CTTTCCACATTTGTGTCCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782071 37 + 50890351 TTCGAGTTTCTATTAC-----CTTTCCACATTTCTGTCCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350687 36 + 49145316 TTCCAGTTTCCATTTC-----C-TTCCAGgtttctgtccctc i calJac3.chr22 C 0 C 0 s mm10.chr7 3619784 42 + 145441459 TTTAAGTTACCCTAACATGCTCTCTCCAGATTTCTGTTCATC i mm10.chr7 C 0 C 0 s canFam3.chr1 19579740 37 - 122678785 TTTGAGTTTCTGTTGT-----CATTCCAGATTTGTATTCCTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59939564 15 + 64156825 I a score=618503.000000 s hg38.chr19_GL949748v2_alt 80930 297 + 1064304 TCTGGGTTCCCATCTGTGGTGGTTTCTTGGTCTCCATCTTCTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTTGACCCTAGCTCTC-TAGTGCGCGGGAtctct------------------------ccctcg----ctatctctctggttttccgtgtctctcagtctctgtatttcccgcctctttctGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGCCCCA s panTro4.chr19 59014381 295 + 63644993 TCTGGGTTCCCATCTGTGGTGGTTTCTCGGTCTCCATCTTCTCAGGTTTCTGTCCTGTTTCCCCATCTC--TTGACCCTAGCTCTC-TAGTGCGCGGGATCTCT------------------------CCCTCA----CTATCTCTCTGGTTTTCCGTGTCTCTCAGTCTCTGTATTTCCCGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCAACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGCCCCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655838 290 - 106955855 TCTGGGTTCCCATCTGTGGTGGTTTCTTGGTCTCCATCTTCTCAGGTTT------------CCCATCTCTTTCGACCCTCGCTCTCTTCGTGCGTCGGAtctct------------------------cgctcgctgtctatctctctggttttccatgtctctcagtctctGTATTTCCAGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCAACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939579 286 + 64156825 TCTGGGTTCCCATCTGTGTTGTTTTCT--GTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCCTAGctcgc-tctcg------------------------------------ctctct----ctctctctctggttttccatgtctctcagtctctgtatttcctgcctctttctgcatcactgattctctgacccttcccctcatctcagccctcgg--gccccccttctctctctGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i rheMac3.chr19 I 15 C 0 s macFas5.chr19 54943535 280 + 59248254 --TGGGTTCCCATCTGTGTTGTTTTCT--GTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCctagctcgc-t----------------------------------------cgctcg----ctctctctctGGTTTTCCATGTCTCTCAGTCTCTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCCTCCTCTCAGCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076926 302 + 51301725 TCTGGGTTCCCACCTGTGTTGTTTTCTCGGTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCCTAGCTCGC-TCTCGCGCAGGCTctca----------------------cttgctct----ctctctctctggtcttCCATGTCTCTCAGTCTTTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGacccttcccctcctctcagcCCTGGG--GTCCCCCTTCCCTCTCTGAACATAGAGCGACAGACCAGCTCTTCTCTCCAGGACTGTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782108 302 + 50890351 TCTGGGTTCCCATCTGTGTTGTTTTCTCGGTCTCCATCTTTTCAGGTTTCGGTCCTGTTTCCCCATCTCTTTTGACCCTAGCTCGC-TCTCGCGCAGGCTCTCA----------------------CTTGCTCT----CTATCTGTCTGGTTTTCCATGTCTCTCAGTCTCTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCCTCCTCTCAGCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAGAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACTTGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350723 323 + 49145316 tctgggttgctgtctgtggagttctctcggtctccatctttacgggtttctgtcctgtttccccatctgttttgggggtctgtctc-tgtctcaccggttttccatgtctccagttttccatgtctctcggtct----ccatctctctggttttccatgtctctcggtctctgtctctCCCTGACTCTTCTGCATCACCGATTCTCCGATCCTTACCCTCCTCTCACCCCCTGGCATCTCCCTTTCCCTCTGTGAATATAAAGCGACCAA-CAGCTCTTCTCTCCAGG-CCCTGGAGACGTGCTGGTCTCAGCGGCCC--CCTCCTGTCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619826 171 + 145441459 -----------------------------------------------------------TCCCAGTTCCTTT---------CTCTC-TGTTG---GAGAGATCT------------------------CCCTCA----C-------------TTCCCTGTGTCTTTGCGTCTGT------------------------TGAATCTCTGGCCCTCACTTTCCTTTT-TCCCTGGA-----------------------ATACAGACACAAACCAGCTGTTTTCTCCAGGACTCTGGAGAGCTGCTGCTCTCAGTGGCGCATCCTTCTGTTTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19579777 208 - 122678785 ------------------------TCTGGACTTTTGTCATTCTAGGTGTCTGTCCTGTT----------------------------T--------------------------------------------------CTGTCTCTCTGCTTTTCCGTACCTCCAGGTCTCTAT-CTCCCTGCTTCTCTCTGCATC-------------CCCTCTCTCACCTCTC--CTCTGGG--GTCCCATTTCTCTCTTTGAGTCCAAACTGACAGACTAGC----CTTTATGGGCCTCCCAAGACCTGTTGGTCTCAATGGCCCACCCTCCTGCCCCA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=653025.000000 s hg38.chr19_GL949748v2_alt 81227 154 + 1064304 CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA s panTro4.chr19 59014676 154 + 63644993 CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891110 154 + 60714840 CAGTGCCCGTCCGCGATGATGGGAACATGCCCGACATGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i ponAbe2.chr19 M 933 C 0 s nomLeu3.chr10 102656128 154 - 106955855 CAGTGCCCGTCCGCGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939865 154 + 64156825 CAGTGCCCGCCCGTGATGATGGGAACATGCCGGACGCTCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCCGGAGTGGCTTAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCACCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943815 154 + 59248254 CAGTGCCCGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTTAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077228 154 + 51301725 CAGTGCCGGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAAGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782410 154 + 50890351 CAGTGCCCGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTTCACTGACA--GTGGCGGCCCCTCCCATG--GCTC-CCAATAAAAATGTGAAAAGCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351046 150 + 49145316 CAGTGCCTGTCCGCGATGATGGGAACATGCCCGACATACCCAGCCACCCCCAGGACCCCCAGGGACCCAGCCTGGAGTGGCTGAAGAACCTGTGAGCACCTCCACTGACC--AAGGCG----CACCCTCA--GCTC-CCAATAAAAATGTGAAAACCAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619997 157 + 145441459 CAGTGCCTGTGAGAGATGACGGGAACATGCCTGATGTGCCCAGCCACCCTCAGGATCCTCTGGGTCCAAGCTTGGACTGGCTGAAGAACCTGTGAATGCCTCTGCTGATG--GAAGAGGCCCCTTCCCTGTTGCTCTCCAATAAAAATGTGAAAACTAA i mm10.chr7 C 0 I 105 s canFam3.chr1 19579985 154 - 122678785 CAGTGCCCCTCCGAGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGTCTGGAGTGGCTGAAGAAATTGTGAGCACCTCTGGTGACATGGAGGTGGCCCCTTCC-CT--GTAG-TCAAT-AAAATGCATAGAGTGA i canFam3.chr1 C 0 C 0 a score=720995.000000 s hg38.chr19_GL949748v2_alt 81381 177 + 1064304 CCCCCGAACGTG-AGCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTATTGGGCAT----GCGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG s panTro4.chr19 59014830 177 + 63644993 CCCAAGAACGTG-AGCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTACTGGGCAT----GCGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891264 177 + 60714840 CCCCAGAACGTG-AGCATGCGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656282 175 - 106955855 CCCCAGAACGTG-AGC--GTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCGGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGGGTCAGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940019 176 + 64156825 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTATTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943969 176 + 59248254 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTATTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077382 176 + 51301725 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782564 176 + 50890351 CCCCAGAGCGTG--GCATGTGTGTGATCAGCGGTGGGAACCAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTAGCCAGAGTTGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCTTCATCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351196 176 + 49145316 CCCCAGAATGTG-AGCATGTGTGTGATCAGAGGCGGGAACAGG-AGACGGTGGCCAGGGTGAGTGT------G-GGGTCAGTTTACTGGGCGT----GGGTCAATCAGAGGGTGGGCTGGCTAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGACACCCAACTGGAATCCAGGGCCTCGTCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3620259 184 + 145441459 cctccaacccTGGAACCTGGATATGATCAGAGGTGGGAGCAA-TAAACGGTGACCTAGACAAGTGTACATAGG-GAATCTGTTTATTGGGGAG---AGGGTTAGTCAAAGGGTGGGCTGGCCAGGGTAGGGTAGGGTAGCAATTTGTCTGGCTCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTG i mm10.chr7 I 105 C 0 s canFam3.chr1 19580139 174 - 122678785 CCCCAGCATCTG-AGCTTGAGTGTGATCAGAGGTGGAAACA--------GTGGCCAAGGCGAGTCT------GCCGGTGAGTTTATTGGGGGTGGGGGGGTCAGTCAAATGGGGGACTGGCTAGGGTGGGGTAGGGCAGCAGTTTGTCTGGCCCCCGAGAAACCCAACTGGAGTCCAGGGCCTCATCTG i canFam3.chr1 C 0 C 0 a score=269691.000000 s hg38.chr19_GL949748v2_alt 81558 80 + 1064304 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA s panTro4.chr19 59015007 80 + 63644993 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891441 80 + 60714840 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAAGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656457 80 - 106955855 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940195 80 + 64156825 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944145 80 + 59248254 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077558 80 + 51301725 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782740 78 + 50890351 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAG--GAGAAGGAACAAGATGTTAATAGGCCTGAGAATCCAGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351372 75 + 49145316 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAT----AACAAAGTGTTAGTCAG-CTGGGAATCTAGAAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3620443 78 + 145441459 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTG-AAAAGATACGGAACAAGATGCGAG-GGATATGGAGACCCAGGAGA i mm10.chr7 C 0 I 207 e canFam3.chr1 19580313 0 - 122678785 C a score=301312.000000 s hg38.chr19_GL949748v2_alt 81638 118 + 1064304 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagac-------agggtct-cactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc s panTro4.chr19 59015087 126 + 63644993 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagactctttaaagagactccactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891521 116 + 60714840 TCCCATCAGCTTCACCAtttttgttttcattttgttttgattttt--agagac-------agggtct-cactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656537 118 - 106955855 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagac-------agggtct-cactctgttgccccggctggagtgcagtggtgccatcatagttcactgcagcctctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940275 100 + 64156825 TCCCATCAGCTTCACCAtttttgtttttgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944225 100 + 59248254 TCCCATCAGCTTCACCAtttttgtttttgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077638 100 + 51301725 TCCCATCAGCTTCAccatttttgttttcgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782818 100 + 50890351 TCCCATCAGTTTCACCAtttttgttttcattttgttttgattttcaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351447 118 + 49145316 TCCGATCAGCTTCACTGttttcgttttcattttgtttcgatttttaaagagac-------aggccct-cactctgttgcccaggctggagtgcagtggtgccatcatagtttactgcaggctctgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I e canFam3.chr1 19580313 0 - 122678785 C a score=1224062.000000 s hg38.chr19_GL949748v2_alt 81756 444 + 1064304 ctcccaggctcaagtgatcctcccacctcagcttcccaagtagctgggactacaggcacttgccaaccaagcctaacatg-ttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcagactcctggcctcaagtgatcctcccacctaggcctcccaaagtgccgggattacaggcatgagccactgcacctggccAGCCTCACAGTTCTTGTCTGCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCACACTGGGCCTTCCCTTCCACTCCGTCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCCAGCCTTCTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCTTTCCCTTTCCAACTTTGCC-TCCTTTTT-ACCCA s panTro4.chr19 59015213 440 + 63644993 ctcccaggctcaagtgatcctcccacctcagcttcccaagtagctgggactacaggcacttgccaaccaagcctaacatg-ttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcagactcctggcatcaaatgatcctcccacctaggcctcccaaagtgctgggattacaggcatgagccactgcacctggccAGCCTCACAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCACACTGGGccttcccttccactccgtcttctc------------tga----tccttctcctctactcccagccttctcta-------gctatttttccttctccaggtcttcctctttccctttcCAACTTTGCC-TCCTTTTC-ACCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891637 452 + 60714840 ctcccaggctcaagtgatcctcccatctcagcttcccaagtagctgggactacaggcacatgccaaccaagcctaacatgtttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcaaactcctggcatcaagtgatcctcccacctaggcctcccaaagtgctgggattacaggcatgagccactgcacctggccAGCCTCGCAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCTTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACTCCATCTTCTC------------TGATCCTTCCTTCCCCTCTACTCCCAGCCTTCTATAGCTATCTGCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGTC-TCCTTTTT-ACCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656655 433 - 106955855 ctcccaggctcaagtgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaaccaagcctaacatgtttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcaaactcctggcatcaagtgatcctcccacctaggcc------------gggattacaggcatgagccactgcacctggccAGCCTCGCAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAACCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACTCCGTCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCCAGCCTTCTATA-------GCTATTTTTCCTTCTCCAAGTCTTCCTCCTTCCCTTTCCAACTTTGCC-TCCTTTTT-ACCCA i nomLeu3.chr10 C 0 I 284 s rheMac3.chr19 59940375 455 + 64156825 ctcccaggctcaagtgaccctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtggtcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccAGCCTCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCGGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTCTGATCCTTCCTTTGATCCTTCCTTCTTCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCC--TCCTTTC-ACCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944325 455 + 59248254 ctcccaggctcaagtgaccctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccAGCCTCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCGGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTCTGATCCTTCCTTTGATCCTTCCTTCTTCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCC--TCCTTTC-ACCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077738 454 + 51301725 ctcccaggctcaagtgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcATGCctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccagcctCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTT-CTGGGCACAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGccttcccttccaccccatcttctctgatccttcctttgatccttccttcttctctactcctAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAggtcttcctccttccctttccaacTTTGCC--TCCTTTC-ACCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782918 445 + 50890351 ctcccaggctcaaatgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttcttgt--------------tggtagagatgggagtcacggtatgtcgctcaggctggtctcaaactgctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacggacatgggccactgcacccagccAGCCTCACCGTTCGTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTTCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCCCTCCTTTTC-ACCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351565 453 + 49145316 ctcccaggctcaagtgatcctcccacctcaccctcccaagtagctgggactacaggcacgggccaaccaagccgacccttttttttttttttttttttttctttcctggtagagatgag-gtctcagtatgttgctcagggagatctcaagctcttggcctcaagtgaacctccctcctgggcctcccagagtgctgggattacaggcctgagccactgcacctggccATCCTCACTGTTCTAGTCCTGCCAGGCCGGTCGGCTTCCTCCTTATACCTCAGAGGTAATCCCAGTGTTCCTGGGTCCAGATGCTCTTCCGACTTTCCTCCCCTAACT-GGccttctcttccgccctctctt---------------tgacccctccctctcctctcctcccagccttctcca-------gtta-ctttccttctccaggtctt-ctccttccctttcCAACTTTGCC-TCCTTTTCTACCC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19580313 235 - 122678785 CTTCGAAGCCAAAGTCTTCCTC-------------------------GAC---------------------CTTAATCTG--------------------------GGGGAGAGAAGGA-GCCA---------GCGTAAGCAGGCCTAGAAT--------------------CTCGAGAAGGCC-------------------CAG---------------------CAGCTTCACCATTC--AACCTCC--------TCAACTTCCTCTGTGCACCTGGGA-GAAATCCCAATGGTCCC--------------------------------------ACCTTCCCTTCCAC-CCATGTTCTC------------TGA-CCCTCCTGCTA-------CCCACCCACCCCCA-------GCT--------TCCTCCAGATCGCTCTCCTTCCTTTTCCATCCA------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I a score=512570.000000 s hg38.chr19_GL949748v2_alt 82200 197 + 1064304 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTAACTCAGCCCCAGCCCT------GGCCCCTCCCCTTGAGTCCCCC-CTCC---TTACCTGCACTGGCG s panTro4.chr19 59015653 197 + 63644993 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---TCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTAACTCAGCCCCAGCCCT------GGCCCCTCCCCTTGAGTCCCCC-CTCC---TTACCTGCACTGGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55892089 204 + 60714840 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCTCTGAACTTGActcagccccagccctggccccggcccctccccttgagtcccccgctcc---ttacctgcactagcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102657372 204 - 106955855 aGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAgccctgaacctgactcagccccagccctggccccggcccCTCCCCTTGAGTCTCCCCCTCC---TCACCTGCACTGGCG i nomLeu3.chr10 I 284 C 0 s rheMac3.chr19 59940830 202 + 64156825 AGCCTTTGCCCCACTTTTTCCAAATA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGACCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCAG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTGCACCGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944780 202 + 59248254 AGCCTTTGCCCCACTTTTTCCAAATA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGACCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCAG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTGCACCGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47078192 208 + 51301725 AGCCTTTGCCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGGCCTCCTCCAGCACATCCTGGTT-ACCTCCTTTCTTCAACTTCCCCCAGCCCTGGGCCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCGG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTccccccccccccGTCACCTGCACCGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46783363 203 + 50890351 AGCCTTTGCCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGGCCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTTGGCCCCAGCCCTGGCCTCAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTCCACCGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45352018 123 + 49145316 AGCCTTTGCCCCACTTTTTCCAGCTA------CCTCCCTGCCTGATCCTAGG---CTTCCAACACTTCCTGTTTCACCACCTTTCTCCAACTTG-CCCAGCC----------------------------CCCAAGAGCCCTGAACTTGATTCCG-CCCAGC------------------------------------------------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19580548 158 - 122678785 AGCCCTCACCTGGCTTCTTCCAGCTCTTTATTCTTCCCTGCCCA-----------CCCCCACCTCTCCCAGCCCCACCTCCTTTCTCCAGTTGTCCCTtgccctgagctt---------------------------gtcctgagcct------------gccctgagcctgAATGCTCTAC--AAGGCCCAGCTCCC---ACAACACTGCTG--- i canFam3.chr1 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I a score=2615560.000000 s hg38.chr19_GL949748v2_alt 82397 761 + 1064304 CCGGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCGC-CTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCACCGGGGGCTGGGCTGCCGGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGTCTCTTTCTCTGGAGGCTCATTCTCCGCATTGCCTGGGGTGGGGGCATCCGTGCCCTGGCTGCCCTCATCCTGGCAGGCAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AACGGAATAACTT-ATCTCCTAGCGGCTGGGGAAAAGGGCCACAGGATAGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCTGTCc--------tggagccagacggtcctgagctctggcactggaggcctgggagccatgcc-cttgaccagccttgagacctcgagcaagacaaggcaaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagcggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcatatgtgagttataa-t s panTro4.chr19 59015850 761 + 63644993 CCAGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCGC-CTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGTGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCGGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAATGTCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCCGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AACGGAATAACTT-ATCTCCTAGCGGCTGGGGAAAAGGGCCACAGGATAGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCTGTCC--------tggagccagacggtcctgagctctggcattggaggcctgggagccatgcc-cttgaccagccttgagacctcaagcaagacaaggcgaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagcggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcaTATGTGAGTTATAA-T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55892293 819 + 60714840 ccagctctggagctccagtccctccccttgagtccctgcctcctcacctgcactggcaccagctctggagtcccagtcccTCCCCTTGAGTTCCCAC-CTTC----CTCACCTGCACTGGGGTCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGGGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTGCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGAATAACTT-ACGTCCTATCAGCTGGGGAAAAGGGCCACAGAATCGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCCGTCC--------tggacccagacggtcctgagctctggcattggaggcctgggagccatgcc-cttgaccagccttgagacctcgagccagacaaggcgaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcaatggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcatatgtgagttgtaa-a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102657576 760 - 106955855 CCAGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCAC-TTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCTCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTTACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGCAGAAGCCACC---AATGGAATAACTT-ATCTCCTAGCAGCTGGGGAACAGGGCCACAGGATAGAGCTCAGCTCCCACTCCGCTCAGCGCCAAAGCTGGCC--------tggacccagacggtcctgagctctggcactggaggcctgggagccatgcc-cttgaccagccttgagacctcgagcaagacaaggcgaccattctgaggct--gtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagtggtgacactgaagtagtgacaccagacgatttct----gta-----cttaacatga-tgtcagc---acttagtaaacattcatatgtgagttataatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941032 765 + 64156825 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCCCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGTGCAGTTCCCACTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCCGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAGGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGACCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACCCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTCAGTT-ACCTCCTAGCAGCT-GGGAAAAGGGCCACAAGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCC--------TGGACGCAGACGGTCCTGAGCTCTGGCATTGGAGGCCTGGGAGCCACGCC-CTTGACCCGCCTTGAGACCTCAAGCAAGACAAGACGACCATTCTGAGGCTGAGTTTCCTGCTCTGC---AACGACG--TGAAACCCTCACCTGGGCTGGATGTTGCAGTGGTGACACCGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTGCTGTGA-TATCGGC---ACTCAGTAAACATTGATATGTGAGTTATCA-T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944982 765 + 59248254 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCCCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGTGCAGTTCCCACTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCCGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAGGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGACCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACCCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTCAGTT-ACCTCCTAGCAGCT-GGGAAAAGGGCCACAAGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCc--------tggacccagacggtcctgagctctggcattggaggcctgggagccacgcc-cttgacccgccttgagacctcaagcaagacaagacgaccattctgaggctgagtttcctgctctgc---aaCGACG--TGAAACCCTCACCTGGGCTGGATGTTGCAGTGGTGACACCGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTGCTGTGA-TATCGGC---ACTCAGTAAACATTGATATGTGAGTTATCA-T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47078400 766 + 51301725 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCTCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGCGCAGTCCCTGCTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAAGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCCCCTGGAGGCCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTAAGTT-ACCTCCTAGCAGCTGGGGAAAAGGGCCCCAGGATAGAGCTCAGCTCTCACCCTACTCAACACCAAAGCTGTCC--------TGGACCCAGACGGTCCTGAGCTCTGGCACTGGAGGCCTGGGAGCCACGCC-CTTGACCAGCCTTGAGACCTCCAGCAAGACAAGACGACCATTCTGAGGCTGAGTTTCCTGCTCTGC---AACGACA--TGAAACCCTCAACTGGGCTGGATGTCGCAGTGGTGACACTGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTACTGTGA-TGTCGGC---ACTCAGTAAACGTTGATATGTGAGTTGTCA-T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46783566 758 + 50890351 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCCCTCCCCTTGAGTCCCCCGACTTC----CTCACCTGCACCGAAGCCAGCTCTGGAGTCAGCGCAGTTCCTGCTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGTGGGGAGGAGGGGGAGGTAGGTGAAGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCGAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTC-GGGGGAGAAGCCACC---AATGGAGTAAGTT-ACCTCCTAGCAGCT-GGGGAAAGGGCCACAGGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCC--------tggacccagacggtcctgagctc------tggaggcctgggagccacgcc-cttgaccagccttgagacctcaagcaagacaagacgaccattctgaggctgagtttccagctctgc---aaagaca--tgaaaccctcaactgggctggatgttgtagtggtgacactgaagtagtgacaccagacgatttct----gta-----cttattgtga-tgtcggt---acttagtaaacattcatatgtgagttatca-t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45352141 709 + 49145316 -----------------------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTTCCCC-CTTC----CTCACCTGCACTGGTGCCAGCTCTGGAGTCAGCGCAGTTCCTGCTCGACGTCCATCCCGTGGTACTCGCCTCCTCTTCCGCCCACTGGGCCCCTCGACGGGGACTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTCGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTACCTGGGGTGGGAGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGCAGGAGGTGGGTGATGG-TGTATCCTGG--------------GCTTCCAGT--GCCTGACCCTCCTGGAGACCCAGCACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGG--AGAAGCCACC---GATGGAATGAGTTAATCTCCTAGCAGTTGGGGAA---------------GAGCTCAGTTCCCGCTCCACTCGAAGCGAAAGCTGTCC--------TGGACCCGGGAGGTCCTGAGCTctggctttggaggcctgg---------------------------------agcgagacaaggcaaccattctgaggctgagtttcctgctctgc--agacgggc--tgacagccttgactgcactgggtgctgcagtggggacactgacgcagtgacaccagcggatttct----gtaaagtgcttcatgtgg-tatcggc---acttaggaaacgttcatatgggagttcGAt-t i calJac3.chr22 C 0 I 307 s mm10.chr7 3620728 682 + 145441459 CCAGCCCAGGATT----------------------------------------------------------CTCA---CCACGCCTTG-GCCCCAGC-CCTCGGCTCCCACCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCA------------CCCGTGGCGCCCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCAGGGGCTGGGCTGGTGGGGTCTAAGGTTGCAGTTGTCCTTTGGGATGGGGAAAGCCCCTCTTTCTCTGGAGGTTCATTCTCAGCATTGCCTGGGGTAGGGACATCTGTGCCTTGGCTGCCATCATCCTGGTAAGATGTAACATGGTGGCGGTTAAAGAC---TCCTGG--------------ATTCCCCATCCTCCCAACCTGCTTGGAGACC-AGAGCTCACCTCCAACACAATGGTGAACTGGCTATCTCGGTAGTCATCCCCGTAGGAGTCCAGCACCCTCATGAGGAACCTGTGTGGATGGAGATGCAGGC---ACTGAAA-ATCTT-ATCTTCTGA------GGGAGTACG--TAAAAGATA-AGTCCAGGTCTC------TTCAAT-CTAAAGTTCGCT--------TGAACTAGAAAGGTTTAGACCTCT-------GTAGCCTGAGCTC------------CCAGCCTGGGAACC------------AGTTGACC---------CCAAGTCTCCTACAC------AATGATAGGTGACATCCTTTACTGGGTTAGGTGCTGTGAAGGT-ATACTACA----------TAGACTATTCTCTAAAGTA-----CACAGTGTGATTGTTAGC---ATCTAGTAAACGTTCA------AATTGTAA-T i mm10.chr7 I 207 I 2 s canFam3.chr1 19580706 733 - 122678785 CAAAACCCAAGGC----------------------------------------------------------CCTGGT-----------------------------CCCACCTGTACCGGGGCTAGTTCTGGAGTGAGCACAGCTCCCGCTCGGCGTCCGTCCCGGGGTGCTCGCCGCCTCTTGCGTCCACTGGGCCCCTCCCCGGGGGTTGGGCTGCTGGGTTCTGGAGGTGCGGGTGTCCTTCGGGGTGGTGACAGCCCCTCTTTCTCTGGGGGCTCATTCTCAGCATTGCCGGGAGTGGGAGCATCTGTGCCCTGGCTGCCCTCGTCCTGGTGGGGAGAAG-GGGTGGCAGGTGAAGGCTGTGTCCTGGTGCCCTGTCCCCCCACACCCACC--CCCCTGCCTGCCAGGAGGCC--ATGCTCACCTCCAGGACTATGGTGAGCTGGCTGGCACGGTAGTCATCGCCATAAGCATCCAGCACTCTCATGAGGAACCTGCGTCCGGAGAGAGGCCATTGGGGAGGCACAACCTC-AGTATCTGGTGGTTGGAGAAAGGGGCGCCCG---ACAGCCCAGCCCCAGCTCA----GAAGCCAAGGCTGTCCCAGACCCATAAACCCAGAAGATTCAGAGCTGCCAAATCTGAGACCTGGTTGCCAAGTAGTTTGAGCAGCA-GGGGACATTGGGCCAGACCAGGGGACCTCTCTGCACCT--GTTTCCCGCTCTGTTGACAGGACA--CGACAGCCCTGAGTGGGTGGGCCACCTGAG-GGTGACACTGCA-------------------TCT----GGA---------GAGTGG-CATCTGCTGTGCTCAGCCCACGTTCTGGTGTCAGCTAT---- i canFam3.chr1 C 0 C 0 a score=38216.000000 s hg38.chr19_GL949748v2_alt 83158 17 + 1064304 tTTTATTGATAACTGAA s panTro4.chr19 59016611 17 + 63644993 TTTTATTGATAACTGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893112 17 + 60714840 ttttattGATAGCTGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658336 17 - 106955855 ttttattGATAACTGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941797 15 + 64156825 TTTTATTGATCACTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54945747 15 + 59248254 TTTTATTGATCACTG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079166 15 + 51301725 TTTTATTGATCACTG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784324 12 + 50890351 ttttattGATAA----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353157 17 + 49145316 TTTTTTTGATAACTGAA i calJac3.chr22 I 307 I 6 s mm10.chr7 3621412 17 + 145441459 TGGTAATGAAGACTGAA i mm10.chr7 I 2 I 2960 s canFam3.chr1 19581439 16 - 122678785 CTTTATTAGTAACTGA- i canFam3.chr1 C 0 C 0 a score=253793.000000 s hg38.chr19_GL949748v2_alt 83175 91 + 1064304 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTCTTTTTTCCCCAGCCCCTGCCTC-CAGAGTTCC s panTro4.chr19 59016628 91 + 63644993 GAGAGGGGAGTACAGAACGTTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTTTTCTTTCCCCAGCCCCTGCCTC-CACAGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893129 91 + 60714840 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCTCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658353 91 - 106955855 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTCTTCTTTCCGCAGCCCCTGCCTC-CAGAGTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941812 88 + 64156825 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCACCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54945762 88 + 59248254 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCACCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i macFas5.chr19 C 0 I 326 s papAnu2.chr19 47079181 88 + 51301725 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCGCCTCTTATCAACAcccccttctcttctttccccagcccctgcctc-cagaagcct i papAnu2.chr19 C 0 I 327 s chlSab2.chr6 46784336 88 + 50890351 GAGAGGGGAGTGCAGAACG---CTCTTAATGACCTCGCCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45353180 85 + 49145316 CAGAGGGGAGTGCAT-ACA---CTTCTGATGACCTTGCCTTTTATCAACACTGGCTTCTGTTTTT--CCCAGTCCCTGCCTC-CAGAGTTCC i calJac3.chr22 I 6 I 6 s canFam3.chr1 19581455 71 - 122678785 ---AGGGCAAGACAAAGAG---C--------------CCTCCTGCTGACATGACCTTCTCTGCTT-CCCTGGTCCCTGCTTCTCAGAGCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I a score=79888.000000 s hg38.chr19_GL949748v2_alt 83266 48 + 1064304 TTAAGGTTC-AATTGATGGA--ATGCCTCCTCTGCACCAGCACCTGGGC-AG s panTro4.chr19 59016719 48 + 63644993 TTAAGGTTC-AATTGATGGA--ATGCCTGCTCTGCACCAGCACCTGGGC-AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893220 49 + 60714840 TTAAAGTTCTAATTGATGGA--ACGCCTCCTCTGCACCAGCACCTGGAC-AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658444 51 - 106955855 TTAAAGTCCTAGTTGATGGAATATGCCTCCTGTGCACCAGCACCTGGGC-AG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941900 20 + 64156825 TTAGttttttttttt--------tgttt------------------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54946176 49 + 59248254 TTAAAGCTCTAATTGATGGG--ATGCTTCCCCCGCACCAGCGCCTGGGC-AG i macFas5.chr19 I 326 C 0 s papAnu2.chr19 47079596 49 + 51301725 TTAAAGCTCTAATTGATGGG--ATGCTTCCTCCGCACCAGCGCCTGGGC-AG i papAnu2.chr19 I 327 C 0 s chlSab2.chr6 46784430 49 + 50890351 TTAAAGCTCTAATTGATGGG--ATGCTTCCTCTGCGCCAGCGCCTGGGC-AG i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45353271 50 + 49145316 TTAAAATTCTAATTGATGGA--ATGCTTCCTCTGCACCAGCGCCTGGACAAA i calJac3.chr22 I 6 C 0 s canFam3.chr1 19581526 31 - 122678785 ------------------GA--ATGCTATCTGGGGGCAAGCACCTGGGT-GG i canFam3.chr1 C 0 I 2773 e mm10.chr7 3621429 2960 + 145441459 I a score=602823.000000 s hg38.chr19_GL949748v2_alt 83314 241 + 1064304 Gtttgttgttgttgttttgcgacggaatctcactctgtcacccaggctggagtgcagtggcgtgaatttggctcaccacaacctccacctccctggtaccagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccactacacccggctaatttttttgta---tttttagtagagacggagtttcaccgtgttagccaggatggtcccgatctcctgacctc--gtgat s panTro4.chr19 59016767 241 + 63644993 Gtttgttgttgttgttttgagacggaatctcactctgtcgcccaggctggagtgcagtggcgtgaatttggctcaccacaacctccacctccctggtaccagcgattttcctgcctcggcctcccgagtagctgggactacaggcgcccgccactacgcccggctaatttttttgta---tttttggtagagacggagtttcaccgtgttagccaggatggtcccgatctcctgacctc--gtgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893269 241 + 60714840 Gtttgttgttgttgttttgagacagaatctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcaccacaacctccacctccctggttccagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccactacgcccggctaatttttttgta---tttttagtagagacggagtttcaccgtgttagccagaatggtctcgatctcctgacctc--gtgat i ponAbe2.chr19 C 0 I 287 s nomLeu3.chr10 102658495 238 - 106955855 GT---TTGTTGTGGttttgagacggaatctcactctgttgcccaggctggagtgcagtggcgtgatctcggctcaccacaacctccacctccctggttccagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccactacgcttggctaatttttttgta---tttttagtagagacagagtttcaccatgttagccaggatggtctggatctcctgacctc--atgat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941920 236 + 64156825 -t------ttgtttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccacctcacccggctag-ttttttgtattttttttagtagagacggggtttcactgtgttagccaggatgctctcgatctcctgacctc--gtgat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54946225 235 + 59248254 Gt------ttgttgttttgaggtggaatctcattctgttgcccaggctggagtgcagtggtgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcgtcagcctcccgagtagctgggattacaagcacctgcaaccatgcccagctaa--tttttgta---tttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctgacctcaggtgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079645 235 + 51301725 Gt------ttgttgttttgaggtggaatctcattttgttgcccaggctggagtgcagtggtgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggaatacaagcacctgcaaccacccccagctaa--tttttgta---tttttagtagagacagggtttccccgtgttggccaggctggtcttgaactcctgacctcaggtgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784479 238 + 50890351 Gt---ttgttgttgttttgaggtggagtctcattctgttgcccagactggagggcagtggcgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaagcacctgcaaccatgcccagctaa--tttttgta---tttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctgacctcaggtgat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353321 231 + 49145316 Gttttttgtcgt--ttttgagacgaagtctcgctttgtctcccaggctggagtgcaatggcgcaatcttggctcacccccacctctgcctcctgggttgaagcgattctcctgcctcagcctcccaagtagctgggatgacaggtgcctg--------cctagctaa--tgtttgtg---tttttagtagagacgggttttccccatgttggccaggctgctattgaactcctgacctcaggtgag i calJac3.chr22 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=173191.000000 s hg38.chr19_GL949748v2_alt 83555 61 + 1064304 ccgcctgcctcggcctcccaaagtgctgggattacaggcatgatgagccactgcgcccggc s panTro4.chr19 59017008 61 + 63644993 ccgcctgcctcggcctcccaaagtgctgggattacaggcgtgatgagccactgcgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893797 58 + 60714840 ccgcctgcctcggcctcccaaagtgctaggattacaggcg---gaagccaccgtgcccagc i ponAbe2.chr19 I 287 C 0 s nomLeu3.chr10 102658733 58 - 106955855 cctcctgcctcggcctcccaaagtgctgggattacaagcg---tgagccactgcgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59942156 58 + 64156825 ccgcctgtctcggcctcccaaagtgctgggattacaggct---tgagccaccgcgcccggc i rheMac3.chr19 C 0 I 2123 s macFas5.chr19 54946460 58 + 59248254 ccgcctgcctcggcctcccaaagtgctgggattacaggca---tgagccaccgcgcccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079880 58 + 51301725 ccgcccgcctcggcctcccaacgtgctgggattacaggtg---tgagccaccgcgcccggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784717 58 + 50890351 ccgcctgcctcggcctcccaaagtgctgggattacaggca---tgagccaccgcgcccggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353552 58 + 49145316 ccacctgcctcggcctcccaaagtgctcagattacaggcg---tgagccaccgtgcccggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=2800.000000 s hg38.chr19_GL949748v2_alt 83616 1 + 1064304 c s panTro4.chr19 59017069 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893855 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658791 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54946518 1 + 59248254 c i macFas5.chr19 C 0 I 1781 s papAnu2.chr19 47079938 1 + 51301725 c i papAnu2.chr19 C 0 I 2426 s chlSab2.chr6 46784775 1 + 50890351 c i chlSab2.chr6 C 0 I 1495 s calJac3.chr22 45353610 1 + 49145316 c i calJac3.chr22 C 0 I 1458 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e rheMac3.chr19 59942214 2123 + 64156825 I a score=964957.000000 s hg38.chr19_GL949748v2_alt 83617 597 + 1064304 TATTtcaacttaagtgaaaatctcacctgtggccagcggctaccgtgctggacagcacagGTACGGACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcagccaagaaggaacagccggaaaggcaggagaccccaggttgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgtgccgagcctgagccaaggactgagatgagaactgtggttgactcagcaacgtggagccattCCTACAAAACTTGCTCCAGTTTTGCTGGTACAGGGACACTGCGAGTGGCAGGGGCAGCAGCCACCTGGGCAGGTTCTGTGGAGACACACAgtgggaagctctgagctcagctcaccacctgcaagctccgac--aaccctgccgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacagc--------aaaaaaaaaagaaaatacttgcagtcaggtctgtgctcgtgtgccttccatcctgctgttccctcccttcagGGGGAGGAGG s panTro4.chr19 59017070 601 + 63644993 TATTTCAACTTAAGTGAAAATCTCACCTGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTACGGACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcagccaagaaggaacagccggaaaggcaggagaccccaggctgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgcgccgagcctgagccaaggactgagatgagaactgtggttgactcagcaacgtggagccattCCTACAAAGCTTGCTCCAGTTTTGCTGGTACAGGGACACTGTGAGTGGCAGGGGCAGCAGCCACCTGGGCAGCTTCTGTGGAGACGCACAgtgggaagctctgagctcagctcaccacctgcaagctctgac--aaccctgccgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacagc----aaaaaaaaaaaaaaaaaaaaaattgcagccaggtctgTGCTTGTGTGCCTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGG i panTro4.chr19 C 0 I 115 s ponAbe2.chr19 55893856 594 + 60714840 TATTTCAACTTAAGTGAAAATCTCACCTGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGC-GACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcggccaagaaggaacagccggaaaggcaggagaccccaggatgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgcaccgagcctgagccaaggactgagatgagaactgtggttgatgcaacaacgtggagccattCCTACAAAGCTTGCTCCAATGTTGATGGGACAGGGACACTGTGAGTGGCAGGGGCAGCACCCACCTGGGCAGGTTCTGTGGAGACACACAgtgggaagctctgagctcagctcaccacctgcaagctccggcttaaccccgctgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcataccgc------------aaaaaaaaaaaaacttgcagccaggtctgTGCTTGTGTGCCTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102658792 591 - 106955855 TATTTCAACTTAAGTGAAAATCTCACCCGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGCGGACACAGgaaccctgggagccgcaggtttcagctttgcggaggggagggaggatgaactagcaaaggcggccaagaaagaacagccggaaaggcaggagaccccaggctgctgggtgcccaggatggcaagaatgggctccagggaagagcacgtagccctgggccactgcgccg-----------aggaccgagatgagaactgtggttga--cagcaatgtggagccattCCTACAAAGCTTGCTCCAAGTTTGCTGGGACAGGGACACT--GAGTGGCAGGGGCAGCAGCCACCTGGGCAGGTTCTGTGGAGACGCACAGTGGGAAGCTCTGAGCTCAGCTCACCACCTGCAAGCTTCGGCTTAACCCCGCCGCAGCCTCATGATATTGGTGCTGCCCTTAGTTGATAGGAAACAGCTCAGAGAA-GGACACTGCTTGCTT--AGTCACACCGC---aaaaaaaaaaaaacacaaaaaaCTTGCAGCCAGGTCTGTGCTCATGTGCTTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59944337 568 + 64156825 tatttcaacttaagtgaaaatctcacccgtggccagcggctaccgtgctggacagcacagGTGCGGACAGAGgaaccctgggagccgcaggtttcagctttg----gggaaaggaggatgaactagcaaaggcggccaggaaggaacagcctgaaaggcaggagaccccaggctgccgggtgaccaggatggcaagaatgggctccagggaagagcacataaccctgggtcactgcgccgagcctgagccgaggaccgagatgagaaccgtggttgactcagcaaggtggagCCCTTCCTACCAAGCTTGCTCCCATTTTGCTGGGACAGGGACACTGTGAGTGGCAGGGGCAGCAGGCACCGGGGCAGGTTTTGTGGAGATGCACAGTGGGAAGCTCTGGCCT---------------------------AAccccgccacaacctcatgatactggcactgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacCACaaaaaaaaaaaaaaaaaaaaaaaaaCTTGCA-------------TTTTGTGCCTTCCATCGTGCTGTTCCCTCCCTTCAGGAGAAGCAGC i rheMac3.chr19 I 2123 I 1 s macFas5.chr19 54948300 564 + 59248254 tatttcaacttaagtgaaaatctcacccgtggccagcggctaccgtgctggacagcacagGTGCGGACAGAGgaaccctgggagccgcaggtttcagctttg----gggaaaggaggatgaactagcaaaggcggccaggaaggaacagcctgaaaggcaggagaccccaggctgccgggtgaccaggatggcaagaatgggctccagggaagagcacataaccctgggtcactgcgccgagcctgagccgaggaccgagatgagaaccgtggttgactcagcaaggtggagCCCTTCCTACCAAGCTTGCTCCCATTTTgctgggacagggacactgtgagtggcaggggcagcaggcaccggggcaggTTTTGTGGAGATGCACAGTGGGAAGCTCCGGCCT---------------------------AACCCCGCCACAACCTCATGATACTGGCACTGCCCTTAGTTGATAGGAAACAGCTCAGAGAAGGGACACTGCTTGCTTAGAGTCACACCAC----aaaaaaaaaaaaaaaaaaaaaCTTGCA-------------TTTTGTGCCTTCCATCGTGCTGTTCCCTCCCTTCAGGAGAAGCAGC i macFas5.chr19 I 1781 I 1 s papAnu2.chr19 47082365 562 + 51301725 TATTTCAACTTAGGTGAAAATCTCACCCGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGCGGACAGAGGAACCCTGGGAGCCGCAGGTTTCAGCTTTG----GGGAAAGGAGGATGAACTAGCAAAGGCGGCCAAGAAGGAACAGCCTGAAAGGCAGGAGACCCCAGGCTGCTGGGTGACCAGGATGGCAAGAATGGGCTCCAGGGAAGAGCACGTAGCCCTGGGTCACTGCGCCGAGCCTGAGCCGAGGACCGAGATGAGAACCGTGGTTGACTCAGCAACGTGGAGCCCTTCCTACCAAGCTTGCTCCCATTTTGCTGGGACAGGGACACTGTGAGTGGCAGGGGCAGCAGTCACCGGGGCAGGTTTTGTGGAGATGCACCGTGGGAAGCTCCGGCTT---------------------------AACCCCGCTGCACCCTCATGATACTGGCACTGCCCTTAGTTGACAGGAAACAGCTCAGAGAAGGGACACTGCTTGCTTAGAGTCacaccgc---aaaaaaaaaaaaaaaaaaaaaaattgca-------------ttttgtgCCTTCCATCGTGCTGTTCCCTCCCTTCAGG---AGCAGC i papAnu2.chr19 I 2426 I 1 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I e chlSab2.chr6 46784776 1495 + 50890351 I a score=118512.000000 s hg38.chr19_GL949748v2_alt 84214 55 + 1064304 CCCTCCACCCGGCCCTCCCTCAGTCC---CAGTGCTCAGCCCTCTCCACCCGGCCCTC s panTro4.chr19 59017786 55 + 63644993 ccctccacccgcccctccctcagtcc---cagtgctcagccccttccacccgcccctc i panTro4.chr19 I 115 C 0 s ponAbe2.chr19 55894451 55 + 60714840 CCCTCCACCCGGCCCTCCCTCAGTCC---CAGTGCTCAGCCCCCTCCACCCGGCCCTC i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102659384 55 - 106955855 CCCTCCACCCCGCCCTCCCTCAGTCC---CAGCGCGCAGCCCCCTCCACCCCCCCCTC i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59944906 55 + 64156825 CCCTCCAGCCGGCCCTCCCTCAGTCC---CGGCGCGCAGCCCCCTGCACCCGGCCCTC i rheMac3.chr19 I 1 C 0 s macFas5.chr19 54948865 55 + 59248254 CCTTCCAGCCGGCCCTCCCTCAGTCC---CGGCGCGCAGCCCCCTGCACCCGGCCCTC i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47082928 58 + 51301725 CCCTCCAGCTGGCCCTCCCTCAGTCTCGGCGGCGCGCAGCCCCCTCCAGCCGGCCCTC i papAnu2.chr19 I 1 I 7 s chlSab2.chr6 46786271 55 + 50890351 CCCTCCAGCCGGCCCTCCCTCAGTCC---CGGGGCGCAGCCCCCTCCAGCCGGCCCTC i chlSab2.chr6 I 1495 I 7 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=54144.000000 s hg38.chr19_GL949748v2_alt 84269 31 + 1064304 CCTCAGT-CCCAGCG--------------------------------------CACAGCCCCTTCCACCC s panTro4.chr19 59017841 31 + 63644993 cctcagt-cccagtg--------------------------------------ctcagccccttccaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894506 69 + 60714840 CCTCAGT-CCCAGTGCTCAGCCCTCTCCACCCGGCCGTCCCTCAGTCTGAGCACACAGCCCCCTCCACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659439 32 - 106955855 CCTCAGTCCCCAGCG--------------------------------------CGCAGCCCCCTCCACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59944961 31 + 64156825 CCTCAGT-CCCAGCA--------------------------------------CGCAGCCCCCTCCAGCC i rheMac3.chr19 C 0 I 25 s macFas5.chr19 54948920 31 + 59248254 CCTCAGT-CCCAGCG--------------------------------------CGCAGCCCCCTCCAGCC i macFas5.chr19 C 0 I 25 s papAnu2.chr19 47082993 31 + 51301725 CCTCAGT-GCTGGCG--------------------------------------CGCAGCCCCCTGCACCC i papAnu2.chr19 I 7 T 38 s chlSab2.chr6 46786333 31 + 50890351 CCTCAGT-CCCGGGG--------------------------------------CGCAGCCCCCTCCAGCC i chlSab2.chr6 I 7 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=27029.000000 s hg38.chr19_GL949748v2_alt 84300 11 + 1064304 GGCCCTCCCTC s panTro4.chr19 59017872 11 + 63644993 ggccctccctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894575 11 + 60714840 AGCCCTCCTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659471 11 - 106955855 CGCCCTCCCTC i nomLeu3.chr10 C 0 T 39 s rheMac3.chr19 59945017 11 + 64156825 GGCCCTCCCTC i rheMac3.chr19 I 25 C 0 s macFas5.chr19 54948976 11 + 59248254 GGCCCTCCCTC i macFas5.chr19 I 25 C 0 s papAnu2.chr19 47082986 11 + 51301725 GGCCCTCCCTC i papAnu2.chr19 T 38 C 0 s chlSab2.chr6 46786364 11 + 50890351 GGCCCTCCCTC i chlSab2.chr6 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=14606.000000 s hg38.chr19_GL949748v2_alt 84311 12 + 1064304 AGT-CCCAGTGCT s panTro4.chr19 59017883 12 + 63644993 agt-cccagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894586 12 + 60714840 AGT-CCGAGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659443 13 - 106955855 AGTCCCCAGCGCG i nomLeu3.chr10 T 39 C 0 s rheMac3.chr19 59945028 12 + 64156825 AGT-CCTGGCGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54948987 12 + 59248254 AGT-CCTGGCGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47082997 12 + 51301725 AGT-GCTGGCGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786375 12 + 50890351 AGT-CCCGGGGCG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=26184.000000 s hg38.chr19_GL949748v2_alt 84323 12 + 1064304 CAGCCCTCTCCA s panTro4.chr19 59017895 12 + 63644993 cagccccttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894598 12 + 60714840 CAGTCCCCTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659456 12 - 106955855 CAGCCCCCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945040 12 + 64156825 CAGTCCCCTGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54948999 12 + 59248254 CAGTCCCCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083009 12 + 51301725 CAGCCCCCTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786387 12 + 50890351 CAGCCCCCTGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355069 12 + 49145316 CAACCCACTCTA i calJac3.chr22 I 1458 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=39653.000000 s hg38.chr19_GL949748v2_alt 84335 13 + 1064304 CCCGGCCCTCCCT- s panTro4.chr19 59017907 13 + 63644993 cccggccctccct- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894610 13 + 60714840 CCCGGCCCTCCCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659468 13 - 106955855 CCCCGCCCTCCCT- i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59945052 13 + 64156825 CCCGGCCCTCCCT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949011 13 + 59248254 CCCGGCCCTCCCT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083021 13 + 51301725 CCCGGCCCTCCCT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786399 13 + 50890351 ACCGGCCGTCCCT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355081 13 + 49145316 CCTGGCCCTCCCT- i calJac3.chr22 C 0 C 0 s mm10.chr7 3624389 14 + 145441459 CCTACCCCTCACCC i mm10.chr7 I 2960 C 0 e canFam3.chr1 19581557 2773 - 122678785 I a score=3600.000000 s hg38.chr19_GL949748v2_alt 84348 1 + 1064304 C s panTro4.chr19 59017920 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894623 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59945065 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949024 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083034 1 + 51301725 C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786412 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355094 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3624403 1 + 145441459 C i mm10.chr7 C 0 C 0 e canFam3.chr1 19581557 2773 - 122678785 I e nomLeu3.chr10 102659481 1 - 106955855 I a score=262629.000000 s hg38.chr19_GL949748v2_alt 84349 99 + 1064304 AGTCCCAGTGCTCAGCCCTC--TCCTCCAACACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCGG---CTTCTCCTTGTGGCTT s panTro4.chr19 59017921 99 + 63644993 AGTCCCAGTGCTCAGCCCTC--TCCTCCAACACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCTGGCCCTCATCTCCGG---CTTCTCCTTGTGGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894624 95 + 60714840 AGTCCCACTGCTCAGCCCTC--TGCTGCAAGACCAAATCCCACTCTT----CTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCAG---CTTCTCCTTGTGGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659482 99 - 106955855 AGTCCCAGCGCGCAGCCCTC--TCCTCCAAGACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCAG---CTTCTCCTTGTGGCTT i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59945066 99 + 64156825 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGGCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949025 99 + 59248254 AGTCTTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGGCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083035 99 + 51301725 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CACACTCTTCCCCC--GTTTGCCTCAGGCCCTGGCCCTcatctcctgcctctcctccttGTGGCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786413 99 + 50890351 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGCCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355095 100 + 49145316 AGTCCCAGTGCTCAGCGCTCCTCCCTCCAAGACCGAATTCCACTCTTCCT----GCTTGCCTCAGCCCCAGGCCCTCATCTCCAGGCTCTCTTCCTTGTGACTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3624404 93 + 145441459 AGGCCCAGGGC-CAGCTCTT--CATTCCATGACCCAGTGCTACTTCTCC-----ACTTCTCTCA-CTCTGGGCCCTTCTCCTCAG--TTTTGTCCCCGTGCTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 19581557 2773 - 122678785 I a score=658438.000000 s hg38.chr19_GL949748v2_alt 84448 184 + 1064304 GTGAGGGTTGGGTGGATGTGGAAGT-GGG----AGAGAC---AGAGGGGCTGGG---AGCATTTGGGAGC--TGAGGCTCACAGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTATGGGGTGGGAAA--- s panTro4.chr19 59018020 184 + 63644993 GTGAGGGTTGGGTGGATGTGGGAGT-GGG----AGAGAC---AGAGGGGCTGGG---AGCATTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTATGGGGTGGGAAA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894719 175 + 60714840 GT---------GTGGATGTGGGAGT-GGG----AGAGAC---AGAGCGGCTGGG---AGCACTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGGAAA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659581 179 - 106955855 GTGAGGGTTGGGTGGATGTGGGAGT-GGG----AGAGAC-------GGGCTGGT---TGCGTTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945165 185 + 64156825 GTGAGGGTTGGGTGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTTTGGGAGC--CGGGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949124 185 + 59248254 GTGAGGGTTGGGCGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTCTGGGAGC--CGGGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083134 185 + 51301725 GTGAGGGTTGGGCGGacgtgggagtgggg----agagac--cAGAGGGACTGGG---GGTGTTTGGGAGC--CGAGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCcgctcctgctgcagcctccgaGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786512 185 + 50890351 GTGAGGGTTGGGCGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTTTGGGAGC--CGAGGCTTAGGGGCCCAG---AGGGGACGGTGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355195 186 + 49145316 GTGAGGGTTGGGTGGTCATGGGAGTGGGG----AGACAC--GATAGCGGGTGAG---AGTGTCTGGGAGC--TGAAGCTCACAGGCCCAG---TGGAGGCACAGAAGGGGTTACCTCCTCTCCTGCTGTAGCCTCCGAGTGATCCTCTGCACTTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGGAAA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3624497 187 + 145441459 ATGAAGGCCAGGAAGACGGGAGATAATGGCACAAAGGGT--GAAAGGTGGTGGA---AATATGTGGGAGCAAAGGGGCT---GGGCCCAC---AGAGTATACAGAATGG--TACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTGTTCAAGACTCGCTCATTCACCTGCAAGGAGGCAGA--- i mm10.chr7 C 0 I 2191 s canFam3.chr1 19584330 196 - 122678785 GTGAGGCCTGCACAGACACGAAGGAGGCA----AGAATCGCCAGAGGTGGTAGAAACAGCAGCTGGGAGC--AGAGGCCCG-GGGCCCAGGGAGGGGGGCGTGCAGGGGCTTACCTCCGCTCCTGCTGCAGTCTCCGTGTTATCCTTTGCACCTGATGAAGTCTGTTCAGGACCCGCTCATTCACCTGCAGGGAGCCAGAAGG i canFam3.chr1 I 2773 C 0 a score=908721.000000 s hg38.chr19_GL949748v2_alt 84632 307 + 1064304 CGCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCT----------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCGGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcgtgctgttcctctacctggaccctctccccagtcatccgcacaacttactccccactc---caagtcttaggtcaactgttacctgctcagagag----cctgaacctcccattaagtcgaaacacacc s panTro4.chr19 59018204 307 + 63644993 CTCCCATCAGCTGGATCCCACGACTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCT----------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCAGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagtcatccgcacaactcactccccactc---caagtcttaggtcaactgttacctgctcagagag----cctgaacctcccattaagtcgaaacacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894894 309 + 60714840 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCTGG--------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCTACCGGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagccatccgcacaactcactctccactc---caagtcttaggtcaactgttacctgctcagagag----cccgaacgtcccattaagtcgaaacacacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659760 304 - 106955855 CTCCCATTAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAAGGGATGTTTAATGGGGCACGCACTAACCTCTGG--------GGAGATTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCGGCTCCCCTCTCACCATGCCACAGTCCTGAGTGCCCTCCAGT---GGgggcctt-ccgcatgctgttcctctccctggac---ctccccagccatcctcacaactcactccccactc---caagtc--aggtcaactgttacctgctcagagag----cccGAACCTCCCATTAAGTCGAAACACACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945350 309 + 64156825 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGTACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGtc-cttccaccttcccctccctccggctcccctctcaccatgccacagtcctgagtgccctcccgt---gggggcctc-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949309 309 + 59248254 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGTATGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTTCCACCTTCCCCTCCCTCCGGCTCCCctctcaccatgccacagtcctgagtgccctcccgt---gggggcctc-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083319 309 + 51301725 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGCACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTtccaccttcccctccctccGGCTCCCCTCTCACCATGCCACAGTCCTGAGTGCTCTCCTGT---GGGGGCCTT-CGGCATGCTGTTCCTCTACCTGGACCCTCTCCCCAGCCGTCCATACGGCTCACTCCCCACTC---CAAGTCTTAAGTCAACTGTTACCTGCTCAGAGGC----CCCAAACCTCCCATTAAGTCGAAACacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786697 309 + 50890351 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGCACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTTCCACCTTCCCCTCCCTCCGGCTCCCCTGTCACcatgccacagtcctgagtgccctcccgt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355381 311 + 49145316 CTCACATGAGCTGGCTCCCACTCCTCCCATTCATTTGTTCAACGGATGTGTAATGGAGCACTTGCTAAGCTTGGG--------GGAGACTGGACAAAGACCCTCCTGTGGCCTGAGGCCACGTCCACCTTCCCatccctcccactcccctctcaccacgctg-ggtcctgagtgccctcctgt----ggggcctt-ccacatgccattcttctacatggaccctcgacccagccattcacgcagctcactccccactccctcaagtcttagatcaactgttacctgctcagggag----cccaaacctcccaTTAAGTCGAAACATACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19584526 269 - 122678785 CACAGGTCACCTGGACTCTGC---------TCACTTATTCCATGTGGGATGAATGTAGCGCCAGCGGGGGCCCAGAGGCCTCAGGGAGCCGGCCACA---CTCCCCATGGCCTCTGGGG-CTGCTGCGCCCACTCCTTtcctgcatctgcgcctcccta-------gctggctgc-ctcctgtcctgggggccttcccacatgc--------------------------------cagaggagctccctccct-------caagcctgacctcagaggttacctcctcagggagtccacccagacctcccaccacacagcaatacccc i canFam3.chr1 C 0 I 354 e mm10.chr7 3624684 2191 + 145441459 I a score=325164.000000 s hg38.chr19_GL949748v2_alt 84939 134 + 1064304 aggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtaggtcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a s panTro4.chr19 59018511 134 + 63644993 aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtctggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895203 134 + 60714840 aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660064 131 - 106955855 Aggccaggcgcggtaat---cgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaagtacaaga--a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945659 119 + 64156825 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattactcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaagatacaaaaa-- i rheMac3.chr19 C 0 I 382 s macFas5.chr19 54949618 118 + 59248254 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattactcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaagatacaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083628 118 + 51301725 aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattattcaaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctttactaaagatacaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46787006 119 + 50890351 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattattcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctttactaaagatacaaaa-a- i chlSab2.chr6 C 0 I 119 s calJac3.chr22 45355692 134 + 49145316 Aggccaggcacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcgaaagcagcctggccaacatggcgaaaccccgtctccactaaaaatacaaaa--a i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I a score=27993.000000 s hg38.chr19_GL949748v2_alt 85073 20 + 1064304 attagctgggcgtggtggca s panTro4.chr19 59018645 20 + 63644993 attagctgggcatggtggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895337 20 + 60714840 gttagccgggcatggtggca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660195 20 - 106955855 attagctgggcgtggtggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949736 20 + 59248254 attacccggatgttgtggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083746 20 + 51301725 attacccggatgttgtggcg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45355826 20 + 49145316 attagccaggcgtggtggca i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e rheMac3.chr19 59945778 382 + 64156825 I a score=8221.000000 s hg38.chr19_GL949748v2_alt 85093 8 + 1064304 ggtgcctg s panTro4.chr19 59018665 8 + 63644993 ggtgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895357 8 + 60714840 ggcgcctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660215 8 - 106955855 ggcgcctg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47083766 8 + 51301725 catgcctg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45355846 8 + 49145316 tgtgcctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=56098.000000 s hg38.chr19_GL949748v2_alt 85101 100 + 1064304 caggatagtcgcacgaacctgggaggtggaggggtgaagtgagttgagatcaccccactgcactccagcctgggcaacagagcgaggttctgt-----ttcaaaa s panTro4.chr19 59018673 100 + 63644993 caggatagtcgcacgaacctgggaggtggaggggtgaagtgagttgagatcaccccactgcactccaggctgggcaacagagcgagattctgt-----ttcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895365 100 + 60714840 caggatagttgcacgaacccgggaggtggaggggtgaagtgaggtgagatcaccccactgcactccagcctgggcaacagagcgagattctgt-----ttcaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660223 100 - 106955855 caggatagtcgcatgaacccgggaggtggaggggtgaagtgagttgagatcaccccactgcattccagcctgggtgacagagtgagactctgt-----ctcaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47083774 82 + 51301725 -----taatttcagctactcgagaggctgaggtcaggagt------------------tccagaccagcccagtcaacatgatgaaaccctgtctttactcaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=3343.000000 s hg38.chr19_GL949748v2_alt 85201 7 + 1064304 aaaaaaa s panTro4.chr19 59018773 7 + 63644993 aaaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895465 7 + 60714840 aaaaaag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47083856 7 + 51301725 aaaaaaa i papAnu2.chr19 C 0 I 393 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=88736.000000 s hg38.chr19_GL949748v2_alt 85208 342 + 1064304 ttgcaacacacccgaccccccttcccatgccagaaccccacccggccattcactcctggctttatttcctcctagtgctcatctgaggaggcaggacgcagcctctccgcctctttgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaacgacagcaacttgtttctacatcccgtgccttaaccagagcctggcacgtagtacatcctccatgaacatttgcagaatcaatgaCTTTGCAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG s panTro4.chr19 59018780 342 + 63644993 ttgcaacacacccgcccccccttcccatgccagaaccccaccaggccattcactcttagctttatttcctcctagtgctcatctgaggaggcaggacgcagcctctccgcctctttgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaacgacagcgacttgttcctacatcccgtgccttcaccagagcctggcacgtagtacctcctccatgaacgtttgcggaattgatgaCTTTGAAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895472 334 + 60714840 ttgcaacacacccacccccccttcccatgccagaaccccacctggccattcactcttagctttatttcctcctagtgttcatctgatgaggcaggacgcagcctctc--------tgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaatgacagcgacttgttcctacatcccgtgccttaaccagaccctggcatgtagtacatcctccatgaacatttatggaatcaatgaCTTTGCAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=74622.000000 s hg38.chr19_GL949748v2_alt 85550 209 + 1064304 AGAAGGCCCGTGGGCCCAGACTTGAATAA---GGAGGAGACAAAGGGG-----TGACAGGAGGAAAGTATGCCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAGGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGACCCAAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCCGggc s panTro4.chr19 59019122 209 + 63644993 AGAAGGCCCGTGGGCCGAGACTTGAATAA---GGAGGAGACAAAGGGG-----TGACAGGAGGAAAGTATGCCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAGGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGACCCGAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCAGggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895806 206 + 60714840 AGAAGGCCCGTGGGCCCAGACTTGAATA------AGGAAACAAAGGGG-----TGACAGGAGGAAAGTACACCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAAGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGAACCGAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCAGggc i ponAbe2.chr19 C 0 C 0 s mm10.chr7 3626875 209 + 145441459 AGAAGATCTTTAAGCCAACACCTGAATGACAGGCAGGAGACAAATAAGAAGCAAGTCAGGAGGAGAACATTCCAGAATCAGGGAACAGCCCT---TGAACTTTTTGAAGGCCCCAGCCTAGATATGGAAAGGAAAGGACAAGACTCAGTCAAACAGTG--CCTAGGACACAGGCTAAAG-------TTctttctgatcagaaagacctgcactttccaggc i mm10.chr7 I 2191 I 1545 e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=84692.000000 s hg38.chr19_GL949748v2_alt 85759 321 + 1064304 ggggcacagtggctcacgcctgtaatcccagcactttgggaggccggggcgggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaagatacaaaaattggccggatgttgtggcacatgcctgtaatctcagctactcaagagtttgaggtcgggagttccagaccagcccggccaacatgatgagacctcatctctactaaaaaaaaaaaaaaaaaaa----gaaaaatacaaaaattagctgggtatggtggcgcatgcctgtaatcccagtttctcaggaggctgagg s panTro4.chr19 59019331 322 + 63644993 ggggcacagtggctcacgcctgtaatcccagcactttgggaggccggggcaggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaagatacaaaaattggccggatgttgtggcacatgcctgtaatctcagctactcaagaggctgaggtcaggagttccagaccagcccagccaacatgatgaaacctcatctctactaaaaaaaaaaaaaaaaaaa---agaaaaatgcaaaaattagctgggtatggtggcgcatgcctgtaatcccagtttctcaggaggctgagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896012 325 + 60714840 ggggcacagtggctcacgtctgtaatcccagcactttgggaggccggggcgggcagatcccttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaattggccggatgttgtagcgcatgcctgtaatcccagctactcaggaggcagaggtcaggcgttccagaccagcctggccaacatgatgaaacctcatctctactaaaaaaaaaaaaaaaaaaaaaaagaaaaatacaaaaattagctgggtgtggtggcgcatgcctgtaatgccagtttctcgggaggctgagg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=41293.000000 s hg38.chr19_GL949748v2_alt 86080 108 + 1064304 caggagaatcgcttgaacccaggagctggaggttgcagtgagccgagatcacaccactgccctccagcctgggtgacagagtaagactctgtctcaaaagaaaaaaaa s panTro4.chr19 59019653 104 + 63644993 caggagaatcgcttgaacccgggagctggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtaagact--gtctcaaaa--aaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896337 102 + 60714840 caggagaatcgcttgaacccgggaggtggaggttgcagggagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctc------aaaaaaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45355854 98 + 49145316 caggagaatcacttgaa-ctgggaggcagaggctgcagtgagctgagatcatgtcactgcaatccagcctggatgacagagtaacaccctgttt-------aaaaa-- i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=19887.000000 s hg38.chr19_GL949748v2_alt 86188 26 + 1064304 aaaaaaaaGTgccaggcacggtggct s panTro4.chr19 59019757 26 + 63644993 aaaaaaaaGTgccaggcacggtggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896439 26 + 60714840 ataaaaaaGTgccaggcacggtggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660323 26 - 106955855 aaaaaaaaGTgctaggcacggtggct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45355952 26 + 49145316 aaaaaaaaCAgctgggtacggtgact i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=99426.000000 s hg38.chr19_GL949748v2_alt 86214 99 + 1064304 cacgcttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccagc----ctaacgtggtgaaaccctgtctctact s panTro4.chr19 59019783 99 + 63644993 cacacttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccagc----ctaacatggtgaaaccctgtctctact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896465 103 + 60714840 cacatttgtaatcccagcactttcagaggccaaggcgagcagatcacctgaggtcaggagtttgagaccagcctgactaacatggtgaaaccctgtctctact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660349 103 - 106955855 cacccttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccaggctgactaacatggtgaaaccctctcttcact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949756 85 + 59248254 catgcctgtaatctcagctactcgagagg------------------ctgaggtcaggagttccagaccagcccagtcaacatgatgaaaccccatctctact i macFas5.chr19 C 0 I 17 s calJac3.chr22 45355978 103 + 49145316 cacgcctgtaatcccagcactttgggatgcctaggtgggtggatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccttgtatctact i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59945778 382 + 64156825 I a score=402033.000000 s hg38.chr19_GL949748v2_alt 86313 240 + 1064304 aaaaatacaaaattagccaggtgtagtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaaat-ccatctaaaaaaaaa------------------gaGTTCAAGTTTTGGCTCTggcttggcacagtggctcatgcctataatcccagcactttga------------------------gaggccagg s panTro4.chr19 59019882 243 + 63644993 aaaaatacaaaattagccaggtgtagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagactcgcttgaacccaggaggcggaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaa-a--aa------------gaGTTCAAGTTTTGGCTCTggcttggcacagtggctcatgcctataatcccagcactttga------------------------gaggccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896568 268 + 60714840 aaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaaaa--aa------------gaGTTCAAGTTTTggctctagcttggcacagtggctcatgcctataatcctagcactttgagaggccaaggcaggaggatcactcgaggccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660452 275 - 106955855 aaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccagcaggcagaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaaaa--aa-----aagaCCTGAGTTCAAGTTTCCGCTCTggcttggcacagtggctcatgcctataatcccagcactttgagaggacaaggcaggaggatcactcaaggccagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949858 259 + 59248254 aaaactacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaatcgcttgaacccagaaggtggaggttgcggt-gagccgagatcacaccattgcactccagcctgggcaacaagagcgaaactcccatctgaaaaaaaaaaagaaagaaaaagaCCGGAgttcaagtctcagctctggcctggcacagtggctcatgcctataatcccagcactttga------------------------gaggccaag i macFas5.chr19 I 17 I 16 s chlSab2.chr6 46787244 254 + 50890351 aaaactacaaaattagctaggtgtggt---gtatgcctgcaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccagaaggtggaggttgcggt-gagccgagatcacaccattgcactccagcctgggcaacaagagcgaaactcccatctgaaaaaaaaaa--aaagaaaaagaCCGGAGTTCaagtctcagctctggcctggcacagtggctcatgcctagaatcccagcactttga------------------------gaggccaag i chlSab2.chr6 I 119 I 16 s calJac3.chr22 45356081 280 + 49145316 aaaaatacaaaattagctgggtgtggtggtgcatgcctgtaatcccagctactcgggatgctgaggcaggagaatcgcttgaacccaggaggtggaggttgcggtggagctgagatcgcatcattgctctccagcctaggcagcaagaatgaaacc-ccatctcaaaaagaaaa--aa-gaaaaagacctgagttcaaatcttggctctggcttggcatggtggctcatgcctataatcccagcactttgagaggccaaggcaggaggatcacttgaggccagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59945778 382 + 64156825 I a score=382868.000000 s hg38.chr19_GL949748v2_alt 86553 180 + 1064304 agttcgacaccagcctgggcaacagagtgagacccc-aacact-caaaaactaaccaaa----aaaattagctgggcttggtggctgtagtcccagctccttcggaggctg---------------agattgctagagtccaggatgttggggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga s panTro4.chr19 59020125 181 + 63644993 agttcgacaccagcctgggcaacagagtgagacccccaacact-caaaaactaacaaaa----aaaattagctgggcttggtggctgtagtcccagctccttcggaggctg---------------agattgctagagtccaggatgttggggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896836 180 + 60714840 agttcgacaccagcctgggcaacagagtgagacccc-gacact-caaaaactaacaaaa----aaaattagctgggcttggtggctgtagtcccagctcctttggaggctg---------------agattgctagagcccaggatgttggggctgcagtgaaccacagtcatgccactgcactccagcctgggcaacaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660727 175 - 106955855 agttcaacaccagcctgggcaacacagtgagacccc-aacact-caaaaactaac--------aaaattagctgggcttggtggccgtcgtcccagctccgtcggaggctg---------------agattg-tagagcccaggatgttggagctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946160 176 + 64156825 agtttgacaccagcctgggcaacagagtgagaccgc-aacactacaaaaaaaaa---------aaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagcccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i rheMac3.chr19 I 382 C 0 s macFas5.chr19 54950133 175 + 59248254 agtttgacaccagcctgggcaacagagtgagacccc-aacactac-aaaaaaaa---------aaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagcccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i macFas5.chr19 I 16 C 0 s chlSab2.chr6 46787514 185 + 50890351 agttcgacaccagcctgggcaatagagtgagacccc-aacactacaaaaaaaaaacaaaaaacaaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagtccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaca i chlSab2.chr6 I 16 C 0 s calJac3.chr22 45356361 193 + 49145316 agtttgacaccagcctgggcaacagagtgagacccc-atgactacaaaaaagaa---aa----aaaagtagctgggcatggtggctgtagtcccagcttcttgggaggctggaggctaagacaggaagattgctagagcccaggaggtggaggctgcagtgagccacaatcataccactgcactccagcctgggcaacaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=460249.000000 s hg38.chr19_GL949748v2_alt 86733 206 + 1064304 gaaagaccctgtctcaaaaaaaaaaaa--aaatctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaatagtagta--------atCTATTCCT-GGGGG-TGGATTAATGGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGGTGTCTGTCTGTTAAACAGGGTTTGGAAT s panTro4.chr19 59020306 203 + 63644993 gaaagaccctgtctcaaaaaaaaaaaa-----tctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaataggagta--------atCTATTCCT-GGGGG-TGGATTAACGGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGGTGTCTGTCTGTTAAACAGGGTTTGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897016 200 + 60714840 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaataggagta--------atCTATTCCTGGGGGG-TGGATTAACAGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGG-CTTGGTGTCTGTCTGTTAAACAGAGTTTGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660902 204 - 106955855 gcaagaccctgtctcaaaaaaaaaaaaaaaaatctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaatagaagta--------atCTATTCTT-GGGGG-TGGATTAACAGAAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGG----TGTCTGTTAAACAGGGTTTGGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946336 200 + 64156825 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgaactctgag--cttgggtgcattacttaacctctctgagcctttattttctacgctagta--aaataggaata--------atCTATTCCT-GGGGG-TGGATTAAGAGCAGAGGCTCCAA------------------------TTGAGTCCATTTGGGCCTTGGTGTCCATCTGTTAAGCAGGGTTTGGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950308 200 + 59248254 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgaactctgag--cttgggtgcattacttaacctctctgagcctttattttctacgctagta--aaataggaata--------atctattcct-gGGGG-TGGATTAAGAGCAGAGGCTCCAA------------------------TTGAGTCCATTTGGGCCTTGGTGTCCATCTGTTAAGCAGGGTTTGGAAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787699 199 + 50890351 gcaagaccctgtctcaaaaaaaca--------tctcagatctgccactgctgagctctgag--cgtgggtgcattacttaacctctctgagcctttattttctatgctagta--aaacagaaata--------atctattcct-gGGGA-TGGA-TAAGAGCAGAGGCTCCAA------------------------TTGAGTCCGTTTGGGCCTTGGTGTCCATCTGTTAAACAGGGTTTGGAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356554 207 + 49145316 gcgagaccccatctcacaaaaag---------tttcaggtctgccactgctgagctctgtg--cttcggtgtgttacttaacctctctgagccttaattttctatacttgt---aaatagacgtaataacaggatctattcct-gggggctgGATTAAGAGCAGAGGCTCCAG------------------------TTGAGTCCCTTTGGGCCTGGGTGTCCATATGTTAAACAGAGTTTGGAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19585149 219 - 122678785 gaaagacctgggttcaaa--------------tcccag-cctgccact-ctcagctgtgtgaccttgggcaagttacctaacctatcttagtcttgcatttcaccacctgtcttgaata-acgcc--------acctgttctaatggga-cagattaagagcagaaaatcaaatgccagatacatttgagcaaatgcttGAGTCCCTCTGGACCT-GGTATTTGTGTGCTAAACAGGGCTTGGGGT i canFam3.chr1 I 354 I 632 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=10696.000000 s hg38.chr19_GL949748v2_alt 86939 4 + 1064304 ATGC s panTro4.chr19 59020509 4 + 63644993 ATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897216 4 + 60714840 ATGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661106 4 - 106955855 ATGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946536 4 + 64156825 ATGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950508 4 + 59248254 ATGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787898 4 + 50890351 ATGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356761 4 + 49145316 ATGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19585368 632 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=165698.000000 s hg38.chr19_GL949748v2_alt 86943 66 + 1064304 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAATACTGTCATTAAGAATTGAggccagatg s panTro4.chr19 59020513 66 + 63644993 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAATACTGTCATTAAGAATTGAggccagacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897220 66 + 60714840 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAACACTGTCATTAAGAATTGAggccagatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661110 66 - 106955855 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAACACTGTCATCAAGAATTGAggccagatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946540 66 + 64156825 CCCTGGCCTCT-----AGCCTCCCTCCTTACAGAACTTCCCAACACTGTCATCAAGAGTTGAggccaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950512 66 + 59248254 CCCTGGCCTCT-----AGCCTCCCTCCTTACAGAACTTCCCAACACTGTCATCAAGAGTTGAggccaggtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787902 66 + 50890351 CCCTGGCCTCT-----AGCCTCCCTCCCTACGGAACTTCCCAACACTGGCATTAAGAGTTGAggccaggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356765 58 + 49145316 CCC-------------AGCCTCCCTCCTTACAGAACTCCCTAGCGCCGTCATTAAGAGCTGAggccaggtg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19586000 65 - 122678785 CCCAGGCCACTACACCAGCCTCCCTTCTTTCCCAGCTCCCCAACACCACCATTA------GGGGTCAGATG i canFam3.chr1 I 632 I 483 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=196402.000000 s hg38.chr19_GL949748v2_alt 87009 82 + 1064304 tggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct s panTro4.chr19 59020579 82 + 63644993 tggtagttcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897286 82 + 60714840 cggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661176 82 - 106955855 cggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946606 82 + 64156825 tggtggctcatgcctgtaatcctagcattttgggaagccaaggtgagtggatcacttgaggtcaggagttcaagaccagcct i rheMac3.chr19 C 0 I 281 s macFas5.chr19 54950578 82 + 59248254 tggtggctcatgcctgtaatcctagcattttgggaagccaaggtgagtggatcacttgaggtcaggagttcaagaccagcct i macFas5.chr19 C 0 I 278 s chlSab2.chr6 46787968 82 + 50890351 cggtggcttatgcctgtaatcctagcattttgggaggccaaggtgaggggatcacttgaggtcaggagttcaagaccagcct i chlSab2.chr6 C 0 I 286 s calJac3.chr22 45356823 82 + 49145316 caatggctcatgcctgtaatcctagtatttggggaagccaaggcgaggggttcccttgaggtaaggaactcaagaccagcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=365974.000000 s hg38.chr19_GL949748v2_alt 87091 466 + 1064304 gggcaacatggcaaaaccccatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgtgcctgtagtcccagctattttgggggctgaggcaggaggactgcttgaacctgggagactgaggctgcaatgagctgagattgcgccactgcactccagctttggtgacaaagtgagaacctgtctcaagaaa---gagaaaaagaGTTGAAggccaggcgtggtggctcaagcctgtaatcccagcaccttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatagaaaaattagctgggtgtggtggcgggcgcctgtaatcccagctactagggaggctgagtcaggagaatcacttgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca s panTro4.chr19 59020661 452 + 63644993 gggcaacatggcaaaaccccgtctctacaaaaagtacaaatattagccaggtgtggtggtgtgcgcctgtagtcccagctattttgggggctgaggcaggaggactgcttgaacctgggagatggaggctgcaatgagctgagattgtgccattgcactccagc-------acaaagtgagaacctgtctca----------gaaaaagaGTTGAAggccaggcatggtggctcaagcctgtaatcccagcaccttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcgcctgtaatcccagctactagggaggctgagtcaggagaatcactcgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897368 465 + 60714840 gggcaacatggcaaaacctcatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgcgcctgtagtcccagtttttttgggggctgaggcaggaggactgcttgaacctgggagat-gaggctgcaatgagctgagactgtgccactgcactccagctttggtgacaaaatgagaccctgtctcaaaaaa---gagaaaaagaGTTGAAgaccaggcatggtggctcaagcctgtaatcccagcaccttgggaggctgaggcaggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcgcctgtaatcccagctactagggaggctgagtcaggagaatcacttgaaccccggaggtggaggttacagtgagctgagatggtgccattgcactcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661258 439 - 106955855 gggcaacatggcaaaaccccatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgcacctgtagtcccagctatttcaggggctgaggtagaaggactgcttgaacctgagagatcgaggctgcagtgagctgagattgcgccactgcactccagctttggtgacaaagtaagaccctgtctcaaaaaa---gagaaaaagaGTTGAAggccaggtgtggtggctcaagcctgtaatcccagcaccttgggaggctgaagcggtcggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtttctactaaaaatacagaaattagctgggtgtggtggc---------------------------aggctgagtcaggagaatcgcttgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45356905 464 + 49145316 gggcaacatggcgaaaccccagctctacaaaaagtacaaacgttagccaggtgtg-----gtgtgcctgtagtccccgctgttttgggggctgaggcaggaggattgcttgaacctgggaggttgaggctgcagtgagctgagattgcaccactgcactccagctttggtgacaaagtgagacgctgcctcaacaaagaggaggaaaaaaGCTGAAggccaggcgtggtggctcacacctgtaatcccagcaccttgggaggctgaggtgggtggatcacctgagatcaggagtttgagaccagcctggccaacgtggtgaaacgccggctctactaaaaatacaaaaattcgttgggtgtggtggcacacacctgtagtcccagctactcgggagactgaggcaggagaatcacctgaacccaggaggtggaggttacagtgagcaaagatggcaccactgcactcca i calJac3.chr22 C 0 I 2105 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54950660 278 + 59248254 I e rheMac3.chr19 59946688 281 + 64156825 I a score=326476.000000 s hg38.chr19_GL949748v2_alt 87557 633 + 1064304 gcctgggagacaagagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaaaaaagttgaattatttcccccaaaagagggtgttgaggctttaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaagggtaaattgggacacagacacacacacaggg--agcagcaatgtgaagatgaaggcggagatcagggtgatgtttgtacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctgtcgacaccttgccttggatgtctagcctccagaactgtcagacaggaatttctgtgcttgagggaccctatttgtgataagttctgggagtccaagcagactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgttcctcccccatttgaaacccttcagtggctccttcactctcaagg-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagccctgcctgctgtttaatcctcatTGATTGA s panTro4.chr19 59021113 632 + 63644993 gcctgggagacaagagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaga---gttgaattatttcccccaaaagagggtgttgaggctctaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaggccagtgggtgggccctaatccagtatgactggagtccttataaaaagggtaaattgggacacacacacacacacagaggcagcagcaatgtgaagatgaaggcggagatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctgtcgacaccttgccttggacgtctagcctccagaactgtcagacaggaatttctgtgcttgagggaccctatttgtgataagttctgggagtccaagcaaactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgttcctcccccatttgaaacccttcagtggctccttcactctcaagg-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagcccTGCCTGCTGTTTAATCCTCattgattga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897833 619 + 60714840 gcctgggagacaagagcgagactccatctcaaaaaaaaaga----------------TttgaattatttcccccaaaagagggtgttgaggctctaacccccagtacctcaggatcgccttatatggaggcagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaaggggaaattgggacacagacacacacacagagggagcagcaatgtaaagatgaaggcggagatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctatcgacaccttgccttggacgtctagccttcagaactgtcagacaagaatttctgtgcttgagggaccctgtttgtgataagttctgggagtccaagcaaactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgtccctcccctgtctgaaacccttcagtggctccttcactctcaaag-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagcccTGCCTGCTGTTTAATCCTCattgattga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661697 620 - 106955855 gcctgggagacaagagcgagactccatctcaaaaaaaaaga----------------GTGCaattatttcccccaaaagagcatgttgaggctctaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaaggggaaattgggacacagacacacacacagagggagcagcaatgtgaagatgaaggcggtgatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctgataatcctgtcgacaccttgcctgggacgtctagcctccagaaccgtcagacaggagtttctgtgcctgagggaccctgtttgtgatacgttctgggagtccgagcaaacgaatacaACTGTCTTCAACGtttcaggcatccagacctgatgctgtccctcccccgtttgaaacccttcagtggctccttcactctcaaggaaaaaaaaaatatccagacttcttgtcctggtgttccttgcctgccaagatctgagcccTGCCTGCTGTTTCATCCTCACTGATTGA i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54950660 278 + 59248254 I e rheMac3.chr19 59946688 281 + 64156825 I a score=2992.000000 s hg38.chr19_GL949748v2_alt 88190 8 + 1064304 TTGATTGA s panTro4.chr19 59021745 8 + 63644993 ttgattga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898452 8 + 60714840 ttgattga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662317 6 - 106955855 TTGAtt-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54950938 8 + 59248254 ttgttttg i macFas5.chr19 I 278 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59946688 281 + 64156825 I a score=12034.000000 s hg38.chr19_GL949748v2_alt 88198 11 + 1064304 tt------------ttgagacgg s panTro4.chr19 59021753 19 + 63644993 tt----gattgattttgagacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898460 23 + 60714840 ttgattgattgattttgagacgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662323 9 - 106955855 --------------ttgagacgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946969 11 + 64156825 ------------ttttgagacgg i rheMac3.chr19 I 281 C 0 s macFas5.chr19 54950946 11 + 59248254 ------------ttttgagacgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788336 11 + 50890351 ------------ttttgagacgg i chlSab2.chr6 I 286 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e papAnu2.chr19 47083863 393 + 51301725 I a score=558783.000000 s hg38.chr19_GL949748v2_alt 88209 262 + 1064304 agtctcactctgtcacccaggctggagtacagcagcatgatcttggctcactgcaacctccgccttccgggttcaagcaattctcatgcctcagcctccctagtagctgcgactacaggtgcgcaccaccacacctggctaattttttt-gta-ttttagtaga---gatggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcctcagcctccca--gtgctaggattacaa--------------------------------gcgtgagcca s panTro4.chr19 59021772 263 + 63644993 agtctcactctgtcacccaggctggagtacagcagcatgatcttggctcactgcaacctccgcctcccgggttcaagcaattctcatgcctcagccccccgagtagctgcgactacaggtgcgcaccgccacacctggctaattttttttgta-ttttagtaga---gatggggtttcaccgtgttggccaggctggtctcgaactcctaacctcagatgatccgcctgcctcagcctccca--gtgctaggattacaa--------------------------------gcgtgagcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898483 264 + 60714840 agtctcactctgtcacccaggctggagtatggcagcatgatcttggctcactgcaacctccacctcccgggttcaagcaattctcatgcctcagcctcccgagtagctgggactacaggcgcacaccaccacacctggctaattttttt-gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccacggtgctgggattacag--------------------------------gcatgagcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662332 264 - 106955855 agtctcactctgtcacccaggctagagtacagcagcatgatcttggctcactgcaacctccacctcccgggttcaagcaattctcatgcctcagcctcccaagtagctgggactacaggcgtgcaccaccacacctggctaattttttt-gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtctttaactcctaacctcaggtgatccgcctgcctaagcgtcccacagtgctgggattacag--------------------------------gcatgagcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946980 295 + 64156825 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacatccggctaatttttt--gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtcttgaactcctaaccttgggtgatctgcctgcctcagcctcccacagtgctggggttacaggcatgagccaccgcgcctggccCACCCTCAAGGCATGAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950957 263 + 59248254 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacatccggctaatttttt--gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtcttgaactcctaaccttgggtgatctgcctgcctcagcctcccacagtgctggggttacag--------------------------------gcatgagcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788347 263 + 50890351 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacgtccggctaatttttt--gta-ttttagtaga---gaaggggtttcaccatgttggccaggctggtctcgaactcctaaccttgggtgatctgcctgcctcagccttccacagtgctggggttatag--------------------------------gcatgagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359474 266 + 49145316 agtcttactctgtcacccagggtggagtgctatggcatgatctcggctcactgcaacctccacctcctgcgttcagccagttcttacgcctcagcctcacaagtagctgggacgacaggtgcacaccaccacacctggttaactcttt--gtatttttagtggagatgatggggtttcatcatgttggccaggctggtctggaactcctgaccttaggtaattctcatgccttggcctcccaaag-gctgggattacag--------------------------------gcctgagcca i calJac3.chr22 I 2105 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=613780.000000 s hg38.chr19_GL949748v2_alt 88471 273 + 1064304 ccatgcccagccCAT---CCTTATTCTcagcaaggaggctattgcagtcattcagcccagac-agctggagtttgca-atggcagccatagggatggaggagaggagaagggtcCAGAGACACTCAAGAGGCGGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTCACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG s panTro4.chr19 59022035 273 + 63644993 ccatgcccagccCAT---CCTTATTCTCAGCAAGGAGGCTATTGCAGTCATTCAGCCCAGAC-AGCTGGAGTTTGTA-GTGGCAGCCATAGGGATGGAGGAGAGGAGAAGGGTCCAGAGACACTCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTCACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGATCCCATCTGCGTTGTCAGGGAAGCTCCACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898747 272 + 60714840 ccacgcccagccCAT---CCTCATTCTCAGCAGGGAGGCTATTGCAGTCATTCAGCCCAGAC-AGTTGGAGTTTGCA-GTGGCAGCCGT-GGGATGGAGGGGAGGAGAAGGGTCCAGAGACACTCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTAACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662596 273 - 106955855 ccacgcccagccCAT---CCTCATTCTcagcaaggaggctattgcagtcattcagcccagac-agttggagtttgca-gtggcagccgtagggatggaggggaggagaagggtccagagacattcaagaggcagaatgaaTGAGTCGAGAAGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTCACCTGTGAGCGGTGCCATGCATTGAGGGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947275 275 + 64156825 CCGTGCCTGGCCCAC---CCTCGTTCTCAGCAAGGAGGCTGATGCAGTCATTCAGCCTAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAGGAGAAGGGTCCAGAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGCTTTTTACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951220 274 + 59248254 ccgtgcctggccCAC---CCTCATTCTCAGCAAGGAGGCTGATGCAGTCATTCAGCCTAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAGGAGAAGGGTCCAGAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTTACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788610 274 + 50890351 ccgcgcATGGTCCAC---CCTCATTCTCAGCAAGGAGGCTGATGCAGTCATTCGGCCCAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAAGAGAAGGGTCCAAAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTCACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359740 243 + 49145316 caatgcctggGCCAT--CCCTCATTCTCAGCAGGGAGGCTGGTGCAGTCATTCACCCTAGACAAACTGGAGTTTGCC-ATGGCAGCCGTGGGGATGGAGG-----------------------------GTCAGAATGAATGGGTCGAGAGGAGTGAACCCTGGCAGGGGCATGGGAGATGTGAAGAGCCTGGAC-TTTCACCTGT---CTCTACTACCTATTGAGAGACCCCTGGGAGACATCACAGCACCCATCTGGGTTGTCAGGGAAACTCCACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19586548 229 - 122678785 CCAGGCCAACCGCATGCTCCTCATTCTCACCGAGGA-GCTGATGCAGTGATGCAGCTGAG---AACCTGTGTCTGGG-GCAGAAGCCATGGGGATGG-GGGCAGGGGAAGGATTC-----------------------AACAGGACAGGAGGACCTGA---TGAGAAGGGTACAGGAGACTTGAAAAGTCTGATC-----AGCGGGGAACA-----------TGAGAGGCACCTA-CAAACATCAGTGAGCTGAGCTGGGTCACCAGGGATGCTCAGA- i canFam3.chr1 I 483 C 0 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=980645.000000 s hg38.chr19_GL949748v2_alt 88744 313 + 1064304 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgaat----atataagctaaatgactgaatATATCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACCGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC s panTro4.chr19 59022308 308 + 63644993 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------AGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGGCCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899019 308 + 60714840 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGTTCCCGGAGCCCTGAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662869 309 - 106955855 GGAGATGGCCCTTCCCGGGGCCCAGCGCAGGGCCAGAGACATAATG---------CATGCTAAATGACTGAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAAAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC-------GGGGGGGCGGCAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947550 312 + 64156825 GGAGATGGCCCTTCCAGGGCCTTGGCATAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATACATATAAGTGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACGGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAATGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951494 312 + 59248254 GGAGATGGCCCTTCCAGGGCCTTGGCATAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATACATATAAGTGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAATGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788884 312 + 50890351 GGAGATGGCCCTTCCAGGGCCTTGGCACAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATGCATATAAGCGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCGGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359983 294 + 49145316 GGAGATGG-------AGCGGCCTGGCACAGGGCCAGACACATAGGG----------ATGCTAAATGAGTGAAT--------AAGCAAAA-----GATTCATTCAGCGAGCCAAGGAAGGCTGGGCATGTGGAGAGGCAGAGATGGC--------GGGGGGCAGTAGTTTAGGCCAGGGGACCCCAAAAC--GGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGGTTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i calJac3.chr22 C 0 M 682 s mm10.chr7 3628629 321 + 145441459 GGAAGAGACTACTTAGGGTGCCTGGCACAGACTTAGACCCACATGGATCTGTTCACTTGTTCAAGTACAAAaggaaagggaaaaagaag-----ga------catgaggaggaggaggaggcggtatgaggagggggtggTGTTGGCATCGGCAGCGAGGCGGCAGTTCTGGCGAGAGGACCCCCAAAT--GGGAATCCACACTTACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTACGATTTAGTTCCCGCTGGCGACGCCTTCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGTCCTGAATC i mm10.chr7 I 1545 C 0 s canFam3.chr1 19586777 282 - 122678785 GCACAGGGCTCTcccagtgcctt-gtatggtgcctgatacacaata---------ggtacAGAACCACTGAAC---------------------GATTCACTCAGCCAGGTAAGGAAGGC-AGGCATGTGGACA--------------------GAGAAGGGGTAATTTAGGCCAGGGGACCCCAGAACGGGGGAATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGCACCTGGTACTTCCTACGATTTAGTTCCCGCTGGCGCCGCCGCTGGCCCCGGGCAGCCTCTTCCTCTTCATCTCGCTCCCGGAGACCTGAGCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=131739.000000 s hg38.chr19_GL949748v2_alt 89057 43 + 1064304 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG s panTro4.chr19 59022616 43 + 63644993 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899327 43 + 60714840 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663178 43 - 106955855 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947862 43 + 64156825 CCCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951806 43 + 59248254 CCCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789196 43 + 50890351 ACCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3628950 43 + 145441459 ACCCAGACCACCGGACACAAATTCCACTTCTGTCTCTAGCTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19587059 43 - 122678785 ACCCAGACCCCCGGACACGAACTCCACTTCCGTCTCCAGCTCA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45360277 682 + 49145316 M e papAnu2.chr19 47083863 393 + 51301725 I a score=575990.000000 s hg38.chr19_GL949748v2_alt 89100 174 + 1064304 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGAGGCAGGGAAAGGCTCAGGggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc s panTro4.chr19 59022659 174 + 63644993 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGAGGCAGGGAAAGGCTCAGGggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899370 174 + 60714840 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGCTCAGGggctctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663221 174 - 106955855 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGctcaggggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947905 174 + 64156825 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCCGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGGTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951849 174 + 59248254 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCCGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGGTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789239 174 + 50890351 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGCTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45360959 174 + 49145316 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGTGGCGCTGAAAACTCCTCAAAGCCCACGGCTGCCATGGTCCTAAGGGGCAGGGAAACGCTCAGGGGCCCTGGATCCTGgattctcagcccctcttcccattgaaccagcagcccaaacccc i calJac3.chr22 M 682 I 513 s mm10.chr7 3628993 170 + 145441459 CTTTCTAGGATGTGGCCACCAAACAGGGGAGGCAGAGCCAGCTCTGAGCCTGGTGGCGCTGAGAACTCTTCAAAGCCCACGGCTGCCATGGTCCTGTAGGGCCAAGAA--GTTTTAGGAGCCTATATTCTGGCTCTCCAAGTCC--CTCCCAGGGGGACTTAGGTCCAGGCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19587102 135 - 122678785 CTCTCCAAAATGTGACCACCGAACAGCGGCGGCAGCGCCAGCTCCGAGCCTGGCGGCGCCGAGAACTCTTCAAAGCCCACGGCTGCCATGGTCCTGTAAGGTCAGTAG--GTTCAGGA-------ATCCTGAACCACCGGCCCC------------------------------ i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=-11311.000000 s hg38.chr19_GL949748v2_alt 89274 4 + 1064304 aa-------------------------------------cc s panTro4.chr19 59022833 4 + 63644993 aa-------------------------------------cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899544 41 + 60714840 aaccccttttccctcagacctgggagtccaggcccccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663395 41 - 106955855 aaccccttttccctcagacctgggagtccaggcccccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59948079 4 + 64156825 ag-------------------------------------cc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54952023 4 + 59248254 ag-------------------------------------cc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789413 4 + 50890351 ag-------------------------------------cc i chlSab2.chr6 C 0 I 148 s calJac3.chr22 45361646 4 + 49145316 ag-------------------------------------cc i calJac3.chr22 I 513 C 0 s mm10.chr7 3629163 2 + 145441459 AG--------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19587237 4 - 122678785 AG-------------------------------------CC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=2904465.000000 s hg38.chr19_GL949748v2_alt 89278 1046 + 1064304 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gctcccag-ccctcctccctcagacccagaagtccaagtccgcaacccacccttcgcagcacccacagggttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctccta-gtctgtcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCGACCTCTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCTGCTTAGCAGGATCGGTCCACAGCGGGACGTGAGT---------CCCTTTCCTCCTCGCGGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGAGTAGCTTTGCCTCTATAACGGCGCGAGAGTGAGACGTCATCGGTGAGCGACTAACGCT-------------------AGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACCA-CGGGGAGCGGGAGGC s panTro4.chr19 59022837 1065 + 63644993 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-ccctcctccctcagacccagaagtccaagtccgcaacccacccttcgcagcacccacagggttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcggtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCGACCTCTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGGGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCTGCTTAGCAGGATCGGTCCACAGCGGGACGTGAGT---------CCCTTTCCTCCTCGCGGCTTACGGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAAGAACATCGCAA--GCGGGGACCAATCAGAGAGTAGCTTTGCCTCTATAACGGCGCGAGAATGAGACGTCATCGGTGAGCGACTAACGCTCTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACCA-GGGGGAGCGGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899585 1065 + 60714840 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-cccttctctctcagacccaggagtccaagtgcgcaactcccccttcgcaacacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-caggcagtccaagccccaaccctcaaccagacgcaagagtcctggcttccagcctcctc-gtctctcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCAATCTGTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGACCTTGTGGGAGTTGTAGTTTCTTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCATAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCCGCTTAGCAGGATCGGTCCACAGCGGGCCGTGAGT---------CCCTTGCCTCCTCGCGGCTTACCGCCTCTTTCCGCCTAGTGCCAGGTGTTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACTAATCAGAGA-TAGCTTTGCCTCTATAACGGCGCGAGAATGAGACGTCATCGGTGAGCGACGAACGCTCTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACGAGGGGGGAGCGGGAGGC i ponAbe2.chr19 C 0 M 672 s nomLeu3.chr10 102663436 1148 - 106955855 cctcttccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-ccctcctccctcagacccaggagtccaagtccgcaaccccgctttcgcagcacccacaaagttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttgtctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAAAGGGTTCTAAGGTAAAGCAGTTGCATGAAGGTCCATGAAGCAGTTGCATCTAAGGTCCCAGTCCAGACCCCAGTCCATAAAAGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCATAATGATTGCATAC-AATGCAGCTGCACTGTCTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCAACCTCTTCAATCTGTAGGTTAAGCCCTTCGCAAAACTACTTGTCCCATCAGGGTCAGCAGCCGAGGACAGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTCCCTGTTTCCGGCTTCGCT-------TCGGCCTACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGTCCCGTCGTCCGGCCACAGCGATTCTCCGCTTAGCAGGATCGGTCCATAGCGGGCCGTGAGT---------CCCTTTCCTCCTCGCGGCTTACCGCCTCTCTACGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAAAGTAGCTTTGCCTCTATAACGGCGCGAGAGTGAGACGTCATCGGTGAGCGACGAACGCTCTGGGAAAGCTTATTTCCTAGAAATAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATCGAGACAAGAAGGGAGCGGGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59948083 1159 + 64156825 ccttttccctaagacctgggagtccaggcccccagctcctaatccctcagaccctagaatccaggcccccagcccctcctccctcagacccagggatccaggcccccagcccttcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcagtc---caaacccctagccttctcctccctcaggatgcaccagtccagaccccAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGGTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCTTAGCTTCCAACCTCTTAAATCTCTAGATTAAGCCGTTCACAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACGTCCAACCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGCGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAGCGACGAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACGAGCGGGGAGCGGGAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54952027 1159 + 59248254 ccttttccctaagacctgggagtccaggcccccagctcctaatccctcagaccctagaatccaggcccccagcccctcctccctcagacccagggatccaggcccccagcccttcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagCAGTC---CAAACCCCTAGCCTTCTCCTCCCTCAGGATGCACCAGTCCAGACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGGTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCTTAGCTTCCAACCTCTTAAATCTCTAGATTAAGCCGTTCACAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCAGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACGTCCAACCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGGGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAGCGACAAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCggagaggagaggtgagtgtgatggagacgagcggggagcgggaggC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789565 1078 + 50890351 cctcctccc--------------------------------------------------------------------------tcagatccagggatccaggcccccagcccctcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgacccccgtcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcgaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagCAGTC---CAAACCCCTAGCCTTCTCCTCCCTCAGGATGCACCAGTCCAGACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCAAAG--------GTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCAGGCCTCTTAGCTTCCAATCTCTCAAATCTCTAGATTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTCGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACATCCAACCCGAAT----CCTTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGGGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGTCCAGGAACATCGCGA--GCAGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAACGACGAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCggagaggagaggtgagtgtgatggagaccagcggggagcgggaggC i chlSab2.chr6 I 148 C 0 s calJac3.chr22 45361650 1083 + 49145316 cctcctcct--------------------------------------------------------------------------tcagaccctagaatcca-gcccccagcccctcctccctcagaagacccaggagtccaggtactcagcccctcctgccacagacccaggagtccaggtccccagcccctccttcccagcacccacagggttcaagccctgatcccc-t-ctcccaagatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagtcccaaccctcacctagacgcaggagtccagggttccaacctcctc-gtc--tcagatccagcagta---caaacccctagccttctcctctctcgggatgcaccggtgcagacctcagc----ccATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCTGCTGCAAGAACTACAACCCCCATCAGCCCTCAAAGTAAAAGGTCAT-ATGGTTGCACACAAATGTAGATGCAGTGTCTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCCTCTCTCTGCTCCAATTCCATCTC---CGCGAGCTCCGGGAGCCCCGCGCCTCACAACTTCCAACGTCTCAAATCTCTATGTTAAGCCGTTCCCAAAACTACTTGTCCCATCAGGCCCCGCGGCCGAGGACGGCGGGACGTGGCT-CTAGACCTTATGGGAGTTGTAGTTTCTTGTTTCCGGCTTCGCT-------TCCGCCAACCCCCACGTCCACCGCGAAT----CCCTACTTAAAGGCCTTGCGTTCTCATCTGAGGCCGCAACCAGTCCTCTGAGTTGCCACAGTCTTTCTTCTTGTCTCGATGCCCCGTCGTCCAGCCACAGCGATTCACCGCTTAGCAGGATCGGTCCACAGCGGGCCGTGAGTCTGATTAGCCCCT---CTCCTTGCTGCTTACCGCCTCTCTCCGCCTAGCGCCAGGTGCTAATAAAGTTGTTGTTCCAAACGCGGCCAGGAACGTCGCGA--ACGGGGACCAATCAGAGATCAGCTTTCCCTCGATAACGGCGCGAGTGTGAAACGTCATCGGTGAGCGACGAGCGCTCTGG--AAGCTTATTTCTTAGAAACCGTGGTGCGCAGGGAGGAGAGGTGAGTGTGGTAGAAACGAGGAGAGGGCGGGAGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3629165 926 + 145441459 -----------------------------------------------------------------------------------------CCTGGAGCCCAGATCCTAGCCCTCTCCTCCATC---ACACCCAGCAGCCCA-GACTCTAG-CCCTCCTCCCTCCTACCAAGAAGCCCAGACCCT--AGCCCTTCTTGGTCACTGCCA-GGGATCCAGGCCCCAGTCCTC-GTCCCTAACAAT---------------------------------GAGGAAT-CAG---ACCCTAGCCTCCTCCCTC----AGACTTTGGAGCCCACAC-TCCAATCTCCTT-G-CTCTCAGATCCATAAGAACAGCAAATTCCAAA------TCTCCCCTACGATGCTCCAGTACTGCCTCCGGTTCTCCCACAGA-----------------------------------------------------------------------------------GATTCGAAAAGAAAGCAACTGCACGAACT----TCCCCATCGTCCCTGAGAGCA-------CT-ACAGCCG------ATCGTTGCTG------TTTTTGGAGTCCCCG--TTTACACAA-AGCTCAGCTACTCACCCCTCTCTCTGTTCCAACTCCATTTC---TCTGGTCAAGAGACACCTCAAGCCTCAGAG---------------------AGGTGGAGTCTTGCGCAAAACTACCTCTCCCATCAGGCCTTGCGACACAGGAAAAC----------------------TGGGAATTAAAGTTTCCTA-CTCTGCCTTCGTT-------TGCACCCG-----------ACTCCAAAT----TGCGGCTTGAAGCCTTCGGTTTATCCTCTAGCGCCTGCACCGATCGTCCACGTTGTCACCTTCTTTACTCCTGTCTTGTCGCAGTGTCGACTAGCCAAAGCGAATCTCTGTTTAGCAGGCTCAATCCACGGCGACGTACGACTTCCCCTAGCCCTAGAACCCAGCACTCCCGGTCGCCGTCCCGCGA-----GGCGGCTGCTAATAAAGTTGTTG-TCCAAACGCTGCCGGAAATGTCGTAA--ACGG---CCAATCAAAACACAGATTTATCG----------GCGGCAAGTAAACGTCATCAAAGAGAGCCGAA-GCTCTGGGGAAGCAGATTTCTTGGAAACGATTGTGAGAGGATCGAAGCGGTGAGTGTGATGGAGAAGAAGGGATGGCCGGAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19587241 1015 - 122678785 TCTCCTCCC--------------------------------------------------------------------------TCAGCCCCGGGAGTCCAGATCCCCAGCCCCTCCTCCCTC---AGACCCGGGAGTCC-----------CACT-----------------------------------------------------AGAGTTCGAGCCCCGACCCC--TCCTCCCAGGATCCAGGTGTCCATACCCCCAGACTT--GCTCCCCGAGGATCGCAGGGACTTCAAGCCCCCACTC------AGACCCAGGAGCCGGGGCCTCCAACCTCGTCTGTCTCTCAGATTCAGAACTC---C-AACTCCTAGCTTTTTTCCCCCT--GGACGTCCAAGCGCAGACCCCGGT----CCTTAAG---------------------------------------------------------------------------------AGGGCTC--AGCGAAAGCAGCTGCATGAACTACAATCCCCATCCGCCCTCAA-ATAAAAGCGCAG-ATGGGTGTACGC-GATGCAGCCGCAATGCCTTTTGGGAGCGGTAGTTTCCTCCAA------AGCCACTCACCCCTCTCTCTGCTCCAATTCCATGTCTCTCTCCAGCTCCAGCCGCCGCGGGTCTCAGAACGCCCAGCCTCGCAAACCTCTAGGTTAAGTCCTTCGCAAAACTACCTGTCCCATCGGGCTTCACGGCCTCGGCATCCGGGTCATTGCCGCTGGGTTTTCTGGGAATTGTAGTTCCCTGCTTCCGGCTTCGCTCCTTACCCCCGTCCACCTTCACCTCCACCCGGAGTTCCGCCCTGCTTAAAGGCCTTGCTTTCTCATCTCACTCCTTCCTCGGTCGTCTTAGTTGTCCCCGTCTTTATTCTTGTCTGGGCACCTTCTCA-CTGGCTAGGGCGATGCTCCGCTTAGCAGGCTCAGTACTCGGCGGGCCGTCAGCCCGACAAGTCCCTT--CTCCT--CTGCTTACC-CCCCTCTCCGCTTCGCTGCAGGAACTAATAAAGTTGTTGTTCCAAAGGCGTCCGGGAATGACGCGAGGGCGGGAGCCAATCAGAGCGCGGGTTTGACGCGACGCCGTCGCGAGCCTGGGACGTCATCAGTGGGCGCCGACCACTGTTCGGAAGCGACGCTCCTAGAAACCGTCGTGCGAGGCGGGGAGAGGTGAGTGTAAGCGAGACGAGGGGAGTG-GGGAGGC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=62517.000000 s hg38.chr19_GL949748v2_alt 90324 29 + 1064304 TGGGCTCCTGGGTCTGGGAGAAGAAGTGT s panTro4.chr19 59023902 29 + 63644993 TGGGCTCCTGGGTCTGGGAGAAGAAGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664584 29 - 106955855 CGGGCTCCTGGGTCTGGGAGAAGAAGCGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949242 29 + 64156825 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953186 29 + 59248254 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790643 29 + 50890351 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362733 25 + 49145316 CAGACTCCTGGGTCTGGGAGAAGA----C i calJac3.chr22 C 0 C 0 s mm10.chr7 3630091 23 + 145441459 CAAGCTA------CTGGAGGAGAAAGTGT i mm10.chr7 C 0 I 232 s canFam3.chr1 19588256 29 - 122678785 CGGGCTCTCGGGTCCGGGGGCGGGAGTGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=42275.000000 s hg38.chr19_GL949748v2_alt 90353 21 + 1064304 GTGAGGAAAAAGGCGGGTCTT s panTro4.chr19 59023931 21 + 63644993 GTGAGGAAAAAGGCGGGTCTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664613 21 - 106955855 GTGAGGAAAAAGGCAGGCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949271 21 + 64156825 GTGAGGAGGAAGGCGGGCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953215 21 + 59248254 GTGAGGAGGAAGGCGGGCCTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790672 21 + 50890351 GTGAGGAGGAAGGCGGGCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362758 21 + 49145316 GTGAGGAGAAAGGCGGACCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19588285 21 - 122678785 GCAGGGAGAGAGACACACCTT i canFam3.chr1 C 0 I 1428 e mm10.chr7 3630114 232 + 145441459 I e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=434896.000000 s hg38.chr19_GL949748v2_alt 90374 262 + 1064304 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcgttctgttgcccaggttggagagcagtggcgcgatctcggctcattgcaacctccgtctcccgggttcaaacgattcttctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccctgactaatttttgtatttttagtagagacggggtttccccatgttggtcaggctggtctcgaactcctgatctc--gtgatcc s panTro4.chr19 59023952 262 + 63644993 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcgttctgttgcccaggttggagagcagtggcgcgatctcggctcattgcaacctccgtctcccgggttcaaacgattcttctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccttgactaatttttgtatttttagtagagacggggtttccccatgttggtcaagctggtctcgaactcctgatctc--gtgatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664634 262 - 106955855 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcggtctgttgcccaggttggagagcagtggcgcgatctcggctcactgcaacctccgtctcccgggttcaaacgattctcctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccctggctaatttttgtatttttagtagatacgtggtttccccatgttggtcaggctggtctcgaactcctgatctc--gtgatcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949292 262 + 64156825 TACAGCTTGGtttttttgttgttgttgtttgtttgttttgagacggagtctcggtctgttgcctagggtggagtgcagtggcgctatctcggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctccagaatggctgggattacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953236 262 + 59248254 TACAGCTTGGtttttttgttgttgttgtttgtttgttttgagacggagtctcggtctgttgcctaggttggagtgcagtggcgcgatctcggctcactgcaacctccgtctccagggttcaaacgattctcctgcctcagcctccagaatggctgggattacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790693 258 + 50890351 TACAGCTGGGtttttttgttgttg----ttgtttgttttgagacggagtctcggtctgttgcctaggttggagtgcagtggcgcgatctcggctcattgcaacctccgtctccagggttcaaacgattctcctgcctcagcctccagagtagctgggatgacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362779 247 + 49145316 TACAGtttgtttgttttttt---------------tcttgagacggagtctcactctgttgccccggct-gagcgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagcagtt-tcctgcctcagcctcccgagtagctgggataacaggcgcacggcaccacgcgcagctaatttttgtatttttagtagagacggggtttccccatgttggtcaggctggtgtcgaactcctgaccccaggtgatcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=127922.000000 s hg38.chr19_GL949748v2_alt 90636 57 + 1064304 gcccgcctcggcctcccaaagtgctgtgattacaggcatga-tccaccgcgcctggcc s panTro4.chr19 59024214 57 + 63644993 gcccgcctcggcctcctaaagtgctgtgattacaggcatga-tccaccgcgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55901323 58 + 60714840 gcccgcctcggcctcccaaagtgctgtgattacaggcgtgaccccaccgcgcctagcc i ponAbe2.chr19 M 672 C 0 s nomLeu3.chr10 102664896 57 - 106955855 gcccgcctcggcctcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949554 57 + 64156825 gcccgcctcggcgtcccaaagtgctgtgattacaggcgtgc-cccaccgcgcctggcA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953498 57 + 59248254 gcccgcctcggcgtcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790951 57 + 50890351 gcccccctcgacgtcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45363026 57 + 49145316 tcccacctcggcctcccaaagtgctgggattacaggcgcga-gacaccgagcctggcc i calJac3.chr22 C 0 I 3219 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=1311539.000000 s hg38.chr19_GL949748v2_alt 90693 751 + 1064304 AG---------ttgtttgtttgttttgtctgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgcgatctcggttcactgcaacctccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctagttttttgtatttttagtagagacggggtttcactatgttggccaggctggtctccaactcctgacctcagatgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccaccgctcccggccTTTTACAGCCTGtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttcgctaccctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccagacgccatggctcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccctgtctctacagaaaaatttaaaaattagc s panTro4.chr19 59024271 736 + 63644993 AA---------ttgtttgtttgttttgtctgagacgaagtttcgctcttgttgcccaggctggagtgcagtggcgcgatctcggttcactgcaacttccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctagttttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccaccgctcccggc-TTTTACAGCCTGtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttcgctaccctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagcggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccggacgccatggctcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccag--------------cctgagcaacacagtgagaccctgtctctacagaaaaatttaaaaattagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55901381 760 + 60714840 CAGttgtttgtttgtttgtttgctttgtctgagacgaagtttcgctcttgttgcccaggatggagtgcagtggcgcgatctcggttcactgcaacctcctcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacacccagctaattttttgtatttttagtagagacagagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccactgcccctggccTTTTACATCtcgtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttccctgctctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaagagagccagacgccatggctcactcctgtaatcccagcactttgggtggcccaggcaaaaggatcacttgagcccagaagttggagaccagcctgagcaacacagtaagaccctgtctctacagaaaaatttaaaaattagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102664953 748 - 106955855 AG-----ttgtttgtttgtttgttttgtccgagacgaaatttcgctcttgttgcccaggatggagtgcagtggtgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacacccagctaattttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaacccctgacctcaggtgatccacccgcctgggcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccTTTTACAGCTTGTTTACCCAAAAGTCttaatatgcgcctaccatggtgtggccctgggaatgtggaaggagcaaaaattgttccctgccctcttagagcttcggttgatgcct----gaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgacgtgccttactgtagacaggcagagcgtgcaggacacg-tatcacaaagcaac--cctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccagacgccatggctcactcctgtaatcccagccttttgggtggcccacgcaaaaggatcgcttgagcccaggagtttgagaccaacctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949611 754 + 64156825 Ag----tttgtttgtttgtttgttttgtttgagtcgaagtttcactgttgttgcccagaatggagttcaatggcgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagccacccgagtagctgggattacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctcacctcaggtgatctgcccggctgcgcttcccaaagtgctggaattacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCTAAAAGTCttaatatgctcctaccatggtgtggccctggggatgtggcaggagcaaaaattgttccctgccctctaagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcctgcgggacacg-tatcacaaagcaacctcctctagtctaaag-ggggcccgtgggtcagggaggtggaatgtgagcgctgaaagctgaagagatgctgggctgctaaggagtgaggagagccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953555 754 + 59248254 AG----tttgtttgtttgtttgttttgtttgagacgaagtttcactgttgttgcccagaatggagttcaatggcgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctcacctcaggtgatctacccggctgggcttcccaaagtgctggaattacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCTAAAAGTCttaatatgctcctaccatggtgtggccctggggatgtggcaggagcaaaaattgttccctgccctctaagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcctgcgggacacg-tatcacaaagcaacctcctctagtctaaag-ggggcccgtgggtcagggaggtggaatgtgagcgctgaaagctgaagagatgctgggctgctaaggagtgaggagagccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46791008 816 + 50890351 AG----tttgtttgtttgtttgttttgtttgagacgaagtttcactgttgttgcccagaatggagttaaatggcgcgatctcggttcactgcaacctccgcctcccgggttcaagcgattttcctgcctcagcttcctgagtagctgggactacaggcgcccaccaccacacctggctaattttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaacgcctcacctcaggtgatccacccggctgggcttcccaaagtgctggaatgacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCCAAAAGTcttaatatgggcctaccatagtgtggccctggggatgtggcaggagcaaagattgttccctgccctcttagagcttTGGTTGATGCCTGGCAGACAGGCTTTATCAAATAAtttttttttttttttttttttGACGGANNNNNNNNNNGCGCCCGGCCGGCTTTATCAAATAATTACTTCATTAATCACAAATGTGTGAAGTGCCTTACTGTAGACACGCAGAGCCTGCGGGACACG-TATCACAAAGCAACCTCCTCTAGTCTAAAG-GGGGCCCGTGGGTCAGGGAAGTGGAATGTGAGCGCTGAAAGCTGAAGAGATGCCGGGCTGCTAAGGAGTGAGGAGAgccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccatctctacagaaaaatttaaaaattagc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I e papAnu2.chr19 47083863 393 + 51301725 I a score=512817.000000 s hg38.chr19_GL949748v2_alt 91444 239 + 1064304 cgggcgtgctggtgcgtgcctgtcatctcagctatcgggaggctgaggcgggagaatcgcttgagcccaggtgatcgaggctgccgtgagctatgatggcgccactgcactgcagcctaggtgacagagcaagacatggtctcaaaaaaaagaaaaga-----------------aaagaaaa-----aacaaagtgaaggaaag---------ggccactttagttacaagggactcc-tgtacaaagacctggaggcgggaagagaccg s panTro4.chr19 59025007 244 + 63644993 cgggcgtgctggtgtgtgcctgccatctcagctatcgggaggctgaggcgggagaatcgcttgagcccaggtggtcgaggctgccgtgagctatgatggcgccactgcactgcagcctaggtgacagagcaagacatggtctcaaaaaaaagaaaaga-----------------aaagaaaagaaaaaacaaagtgaaggaaag---------ggtcactttagttacaagggactcc-tgtacaaagacctggaggtgggaagagaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55902141 231 + 60714840 caggcgtgctggtgtgtgcctgtcatctcagctatcgggaggctgaggcgggagaatctcttgagcccaggtggtcgaggctgcagtgagctatgatggcaccactgcactgcagcctaggtgacagagcaagacattgtctcaaaaa---------a-----------------aaagaaaa-----aacaaagtgaaggaaag---------agccactttagttacaagagagtccttgtacaaagacctggaggtgggaagagactg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102665701 237 - 106955855 cgggcgtgctggtgtgtgcctgtcatctcagctatcgcgaggctgaggtgggagaatcgcttgagcccaggtggtcgaggctgccgtgagctatgatggcaccactgcactgcagcctaggtgacaaagcaagacattgtctcaaaaaaaagaa---a-----------------aaagaaaa-----aacaaagtgaaggaaag---------agccactttagttacaaaggactccttatacaaagacctggaggtgggaagaaattg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59950365 248 + 64156825 cgggtgtactg--gtgtgcctgtcatctcagctatcgggaggctgaggtgggagaaccgcttgagcccaggtggtcgaggctgcagggagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtctcaaaaaaaaaaaaaaaaaaag------------aaagaaaagaaaaaacaaagcgaaggaaag---------agccaccgtagttacaagggactccttgtacaaagatctggaggtgggaagaaattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54954309 246 + 59248254 cgggtgtactggtgtgtgcctgtcatctcagctatcgggaggctgaggtgggagaaccgcttgagcccaggtggtcgaggctgcagggagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtctcaaaaaaaaaaaaaaga----------------aaagaaaagaaaaaacaaagcgaaggaaag---------agccaccgtagttacaagggactccttgtacaaagatctggaggtgggaagaaattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47084256 271 + 51301725 CGGGTGTGTTGGTGTgggcctgtcatctcagctatcgggaggctgaggcgggagaaccgcttgagcccaggtggtcgaggctgcagtgagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaagaaaagaaaaaacaaagcgaaggaaaaaaCGACCTTAGTGACCTTAGTTACAAGGGACTCCTTGTACAAAGATCTGGAGGTGGGAAAAAATTG i papAnu2.chr19 I 393 C 0 s chlSab2.chr6 46791824 229 + 50890351 cgggtgtgctggtgtgtgcctgtcatctcagctatcgggaggctgaggcgggagaaccgcttgaccccaggtggtcgaggctgcagtgagctatgatggcgccacagcactgcagcctaggtaacagagcatgacattgtctccaaaaaaaaaaaaa------------------aaagta---------------gaaggaaag---------aGCCACCGTAGTTACAAGGGACTCCTTGTACAAAGATCTGGAGGTGGGAAGAAATTG i chlSab2.chr6 C 0 I 313 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I a score=1782035.000000 s hg38.chr19_GL949748v2_alt 91683 769 + 1064304 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaggaagtggggggtggtgaaagtaaagcagctttactgatcaaatgctcgcagatgagaaatggccaagctaatgtctttagaagaccatttcaagctttaggctggggagaggggcttaaaaaggggaactttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccgaaggctgtcttgagtcacgggccacctggagcatgggctggtgtcaagtcaacaatggccacgttgtagattgatcgccttgaggtgatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggcttacgcctgtaatcccaacagtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatagtgaaaccttgactctac----aaaaaaaaaaaa---------------aaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcaagtgagccaagactgcgccactgcactccaacctgggtgtcagagccagactccatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtatctagtgggaaaggagggaaacaaagaattt s panTro4.chr19 59025251 768 + 63644993 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaagaagtggggggtggtgaaagtaaagcagctttactgatcaaatgctcgcagatgagaaatggccaagctaatgtctttagaagaccatttcaagctttaagctggggagaggggcttaaaaaggggcactttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccgaaggctgtcttgagtcacgggccacccggagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggcttacgcctgtaatcccaacagtttgggaggccaaggtgggtcactcacttgaggtcaagagttcaagaccagcctggcttacatagtgaaaccttgactctac----aaaaaaaaaaaa---------------aaaaa-ttagctgggcatggcggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgtttgaacccaggaggtggaggttgcaagtgagccaagactccaccactgcactccaacctgggtgtcagagccagactccatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55902372 766 + 60714840 ATAAtgtaaccaactc--gtttctgctattcagaggc------agaagaagttgggggtggtgaaagtaaagcagctttattgatcaaatgctcgcagatgagaaatggccaagctgatgtctttcaaagaccatttcaaactttaggctggggagaggggcttaaaaaggggaattttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccaaaggctgtcttgagtcacgggccacccagagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgtcttgaagtaacctctggagttttgcagctgtgtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggctcacgcctgtaatcccaacggtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaaccttgattctac----aaaaaaaaaaaa----------aatgcaaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgctcgaacccaggaggtggaggttgc-agtgagccaagactgtgccactacactccaacctgggtgtcagagccagactccatctttaaaa-aacaaat-----aagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102665938 784 - 106955855 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaagaagtgggaggtggtgaaagtaaagaagctttattgatcaaatgctcgcagttgagaaatggccaagctaatgtctttaaaagaccatttcaaactttaggctggggagaggggcttaaaaaagggaactttgaatgggaggcctacaggagtggtgctgggtatgaggtatgtgtctcttgctccgaaggctgtcttgagccatgggccacctggagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccccgcggcgaggcgctgtggttcatgcctgtaatcccaacagtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaaccttgactctac----aaaaaaaaaaaaaaaaaaaagaaatgcaaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcaagtgagccaagactgtgccactgcactccaacctgggtgtcagagccagactcaatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagagaagccagcagcgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59950613 762 + 64156825 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattaatcaaatggtcgcagatgagaaatggccaagctaatgtctttaaaagaccgtttcaaactgtaggctggggagaggggcttaaaaaggggaactctgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtctttctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatggccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacgtagtttgtttcgtgattagcccctgcggccaggcgcggtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactctac----------aaaaaa---------------aaaaaaatagctgggcgtggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcaggaaacaaagaattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54954555 762 + 59248254 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattaatcaaatggtcgcaaatgagaaatggccaagctaatgtctttaaaagaccgtttcaaactgtaggctggggagaggggcttaaaaaggggaactctgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtctttctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatggccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacgtagtttgtttcgtgattagcccctgcggccaggcgcggtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactctac----------aaaaaa---------------aaaaaaatagctgggcgtggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcgggaaacaaagaattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47084527 760 + 51301725 ATAATGTAACCAACTCAAGTTTCTGCTACTCAGAGGCTAGAATAGGAGAAGTGAGGGATGGTGAAAGTAA---AGCTTTATTGATCAAATGGTCACAGATGAGAAATGGCCAAGCTAATGTATTTAAAAGACCGTTTCAAACTGTAGGCCGGGGAGAGGGGCTTAAAAGGGGGAACTCTGAATCGGAGGCATACAGGAATGGTGCTGGGTACAGGGTATGTGTGTCTTTCTCTGAAGGCTGTCTTGAGACA---GCCACCTGGAGCATGGGCTGGAATCATGTCAGTAATGACCAGGTTTTAGATTGATCACCTTGAGGTAATCTCTGGAGTTTTGCAGCTGGGTTTCCATACCTAGTTTGTTTCGAGATTAGCCCctgcggccaggcgcagtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactttac---------aaaaaaa---------------aaaaaaatagctgggcgtagtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgt-attgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaacaaagattagCCCCTGGAACTTCTAAGTAAGCACATGGATAAGCCATCAGTGCAAGACAGTGTCTAGTGGGAAAGGCGGGAAACAAAGAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46792366 776 + 50890351 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattgatcaaatggtcgcagatgagaaatggccaagctaatgtctttaaaagaccatttcaaactgtaggctggggagaggggcttaaaaaggggaactttgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtcttgctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatagccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacccagtttgtttcgagattagcccctgcggccaggcgcggtagctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaggagttcaagaccaccctggcttacatggtgaaactttgactctacaaaaaaaaaaaaaaaa---------------aaaaaaatagctgggtgtggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaaaaataaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcgggaaacaaagaattt i chlSab2.chr6 I 313 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I a score=279425.000000 s hg38.chr19_GL949748v2_alt 92452 95 + 1064304 caaagtatgttttcaaggctaaaggcaagaaagg--aataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA s panTro4.chr19 59026019 95 + 63644993 caaagtatgttttcaaggctaaaggcaagaaagg--aataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903138 94 + 60714840 caaagtatgttttcaaggctaaaggaaagaaagg---ataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102666722 95 - 106955855 ctaagtgtgttttgaaggctaaaggaaagaaagg--aataagaaagtttgcaaatgcatttggaatctatgccacttggttccaGTAAGTCTTAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951375 95 + 64156825 cagagtatgttttcaaggctaaaggcaagaaagg--aaaaaaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955317 95 + 59248254 cagagtatgttttcaaggctaaaggcaagaaagg--aaaaaaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085287 95 + 51301725 CAGAGTATGTTTTCAAGGCtaaaggcaagaaagg--aaaaaaaaagtttgcaaatgCATTTGGAATCTACACCACTTGGTTCCGGTAAGTCTTAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793142 95 + 50890351 caaagtatgttttcaaggctaaaggcaagaaagg--aaataaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366302 97 + 49145316 caaagtatgttttcaaggctaaaagcaagaaaggaaaaaaaaaaagtttcaaaatgcatttggaatctaagccacttgatgacaGGAAGTCTTAGCA i calJac3.chr22 I 3219 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I a score=144139.000000 s hg38.chr19_GL949748v2_alt 92547 54 + 1064304 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacaggtcggagctggagac-tc s panTro4.chr19 59026114 54 + 63644993 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacaggtcggagctggagac-tc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903232 54 + 60714840 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacatgtcagagctggagac-tc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102666817 54 - 106955855 AGGTGGTGGTCATAGGGgtgtgctgtgtcttgcacaggtcggagctggagac-tc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951470 54 + 64156825 AGGTGGCGGTCGTAGGGGTGTGCtgtgtcttacacaggtcggagctggagac-tc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955412 54 + 59248254 AGGTGGCGGTCGTAGGGGTGTGCtgtgtcttacacaggtcggagctggagac-tc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085382 54 + 51301725 AGGTGGCGGTCGTAGGGGTGTGCTGTGTCTTGCACAGGTCGGAGCTGGAGAC-TC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793237 54 + 50890351 AGGTGGCGGTCGTAGGGgtgtgctgtgtcttacacaggtcacagctggagac-tc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366399 20 + 49145316 GGGTGGAGGTCGCAGGGATA----------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3630346 55 + 145441459 AGGTGGTACCTGGAGGGATGTGCTGTGTTCTGTGTGGGTAGGAACAGGAGACAAC i mm10.chr7 I 232 C 0 e canFam3.chr1 19588306 1428 - 122678785 I a score=68613.000000 s hg38.chr19_GL949748v2_alt 92601 23 + 1064304 gccagtgaacaaaacaaactaaa s panTro4.chr19 59026168 23 + 63644993 gccagtgaacaaaagaaactaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903286 23 + 60714840 gccagtgaacaaaacaaactaaa i ponAbe2.chr19 C 0 I 724 s nomLeu3.chr10 102666871 23 - 106955855 gccagtgaacaaaacaaactaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951524 23 + 64156825 gccagtgaacaaaacaaactaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955466 23 + 59248254 gccagtgaacaaaacaaactaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085436 23 + 51301725 gccagtgaacaaaacaaactaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793291 23 + 50890351 gccagtgaacaaaacaaactaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366419 4 + 49145316 -------------------TAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3630401 20 + 145441459 CTCCGTGAACTAAGCAAGCT--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19589734 23 - 122678785 gccaaagaacaaagcaaaagaaa i canFam3.chr1 I 1428 C 0 a score=946469.000000 s hg38.chr19_GL949748v2_alt 92624 247 + 1064304 gcacctgttgtcgtggagcctgcat---gctagtggggttgataaa-GAAGGACC---AGGGTCTTCTGGGGGAGAATCATCGCTCAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTTTTAGGGAACGCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaagaggagccagcgatcgagg s panTro4.chr19 59026191 247 + 63644993 gcacctgtcgtcgtggagcctgcat---gctagtggggttgataaa-GAAGGACC---AGGGTCTTCTGGGAGAGAATCATCGCTCAGTAATAAGGAGGGAGTTTGTCGGGGCAAGTTTTTAGGGAACCCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaagaggagccagcgatcgagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904033 247 + 60714840 gcacctgtcgtcatggagcctgcat---gctagtggggttgagaaa-gaAGGACC---AGGGTCTTCTGGGGGAGAATCATCGCTCAGTAATAAGGAGGGACTTTATTGGGGCAAGTTTTTAGGGAACCCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaggaagaggagccagcgatcgagg i ponAbe2.chr19 I 724 C 0 s nomLeu3.chr10 102666894 247 - 106955855 gcacctgtcgtcgtggagcctgtgt---gcgggtggggttgataaa-GAAGGACC---AGGGTCTTCCGGGGGAGAATCATCGCTCAGTAATAAAGAGGGACTTTGTCGGGGCAAGTTTTTAGAGAACCCTGCTCTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCGAAGAGGCAGCAGAAGAGGAGGAAGGAGGAAGCTATGGGGAGGAAGAAGAGGAGCCAGCGATCGAGG i nomLeu3.chr10 C 0 M 1722 s rheMac3.chr19 59951547 248 + 64156825 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCAC-CAGTAATAAGGAGGGACTTTGTCAGGGCAAGTTTTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCTCTGGCAGACGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagCCAGCCATCGAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955489 248 + 59248254 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTGGTCAGGGCAAGTTTTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCCCTGGCAGACGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085459 248 + 51301725 gcaCCTGTCGTCGTGGAGCCTGCAC---GCTACTGGGGTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTTTTAGGGAaccctgctctccctccc-cacaggcCTCAGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793314 248 + 50890351 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTGTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366423 245 + 49145316 GCCGCTGTCAGTGTGGAGCCTGTGT---GCTGGTGGGATTGGGAAA-GAAGG-CC---AGGGCCTTCTGGGGGAGAAT--TTCCTCAGTGATAAGGAGGGACTT-GTTGGGGCAAGTGTTTAGGGAACCCTACTCTCCCTCTC-CACAGGCCTCGGGATGTCTCTAGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaggaagaggagccagcgatcgagg i calJac3.chr22 C 0 C 0 s mm10.chr7 3630421 244 + 145441459 ------------GTGGAGCCTGCGTGCGGCTACAGGAGCTGATGAA-GAAGAAACTTAAGGGGATCCGGGAGAAGGTGCTCCTTCTGGTGATATGAGTGGACAGGGTCAAGATGCAGTATTAGGGAACCCCATTCTCCCTTTCCCATAGGCCTTGGGATGTCTCTGGCTGATGAGCTCTTGGCTGACCTCGAGGAGGCAGCAGAAGAAGAGGAAGGAGGAAGCTATGGAGAAGAGGAGGAGGAGCCAGCAATTGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19589757 212 - 122678785 atacccgtgcttatggagcctgcat---gcttgtggggCTGACCCGTGAAGGACC---AGGCC------------AAGCCCCTCTCGTTAATGAG--------------------------AGGGGATGCTGCTTTCCCTTCC-CATAGGCCTCGGCATGTCTCTGGCAGATGAGCTTCTGGCCGACCTTgaggaggcggcagaggaggaagaaggaggaagctatggggaggaagaagaggagccagcaatcgagg i canFam3.chr1 C 0 C 0 a score=1265126.000000 s hg38.chr19_GL949748v2_alt 92871 429 + 1064304 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCAGTCAAGACCATCGCCAAGCTATGGGATAGTAAGATGGTAAGAGGACAAGAGGTGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTGTCTTCTCCTTTCCTA-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCCTCCCCATCTCCTGTCTCTCCTGCCAGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCTT-CTCAGCCTTTTCCAGAGCCTTCTTTTTT-------TTTT--GTTTCACCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA s panTro4.chr19 59026438 430 + 63644993 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCAGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGTGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGCGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTGTCCTCTCCTTTCCTA-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCCTCCCCATCTCCTGTCTCTCCTGCCGGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCT--TCAGCCTTTACCAGAGCCTTCTTTTTT-------TTTTTTGTTTCACCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904280 430 + 60714840 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCATTCCTAG-CAGGGGGCTTTAGACAGAATCTCCCAGAAGGGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTCTCCTCTCCTTTTCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTGTGTACCCCTCCCCATCTCCTGTCTCTCCTGCCAGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCT-CTCAGCCTTTTCTAGAGCCTTCTTTTTT-------TTGT-TGTTTCTCCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59951795 438 + 64156825 ATGTGCAGGAGGAGACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCCCTCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCTTCCCTATCTGCTATGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGCGGC---------TGGGT------GTATCTCCCC-CGCAGCCTTTTCCAGAGCCTTCTTTCTT-GTTTGTTTGTTTGTTTCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955737 438 + 59248254 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCCCTCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCTTCCCTATCTGCTGTGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGCGGC---------TGGGT------GTATCTCCCC-CGCAGCCTTTTCCAGAGCCTTCTTTCTT-GTTTGTTTGTTTGTTTCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085707 436 + 51301725 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACA-G--------CTTCTTTTGGAAGAGTCCTGGATTCtgactctcctctcctttcctg-caGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTCTGCCCTTCCCCATCTCCTATGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCC-CTCAGCCTTTTCCagagccttctttttt--tttttttttttgtttctccccAACCCTTTCCCTTTTCCACTAAACATATACTGCATTGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793562 438 + 50890351 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCTCCCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTCTGCCCTTCCCCATCTCCTATGTCTCCTGCCAGGCCCCTAGACTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCC-TGCAGCCTTTTCCAGAGCCttctttttttttttttttttttgtttCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366668 426 + 49145316 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCATGGATAG-CAGGGGGCTCTAAAC--AATCTCCCAGAAAGAGGCGATACAGG--------CTTCTTTTTGAAGAGTCCTGGATTCCGACTCTC--CTCCTTCCCTG-CAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCCGAAGGTACTTCCTCCCCCTTCGTGCCCCTCCCCATCTCCTGACTCTTCTGCCAGGCCCCTTGGCTCCTTTGCTGCTTGTGGC---------TGGGT------ATATCTCCCT-CTCAGAGTTTTCCAGAGCCTTCTCTTTT--------TTTTTATTCCTCCCCAACCCATTCCCTTTTCCAGTAAACATAAATTGCTTCGTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3630665 405 + 145441459 ATGTACAGGAGGAGACCCAGCTGGATCTTTCTGGAGATTCAGTCAAGAGCATTGCCAAGCTATGGGACAGCAAGATGGTGAGGTGGCA-----CCCTTTAAG-TCAGCGTTCCTAGGGAGGAGTGGCCGGAGAGCAG------------------TTCTTTCTG-AGAGGCCTAGTTTCTGACTGTGCTCTCCTTCCTCATCAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAACGTGTCGGAAGGTGCCTCCCACCCTCACTTTCCTCTGCCCAT---------------TCTGACTCCCCGACTCTCTTGCTCCTTATGGT---------TTTATCACCAAGTGTCTCCCTCCTCAGCTTTCCTCAGAGCATTCATTCTT-------CTTTTTTTTTTT---AAATCCAGTTACTGACCCTCTGAAAACATACTGCATTGTA i mm10.chr7 C 0 I 1141 s canFam3.chr1 19589969 417 - 122678785 atgtgcaggaggagACGCAGCTGGATCTTTCTGGGGATTCAGTCAAGAGTATCGCCAAGCTGTGGGACAGCAAGATGGT------------------------GAGTGGGCTGTAGAGAGAAGCTGCCGGGAGG-GCTGATGTGTGCAGTTGCTCTTCTTTCTG-AGAGTCCTGAGTTCTGTCTCTCTGTCCTCCCTGAA-CAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAGGCCAAGGCCTCGGAAGGTACCTCTCCCCTCCTGCTCCCTCTCACCCACCCAGCTGTGTCCACCCAG-CCCCTGGGCTCCTTTGCTGCGTACAGCTTTGAAAGTTTGGT------CTGCCTGCCT-CTCAGCCTTTTTGAGAGCCCTCTTTTTC------------TTTTCCATCCCAACCCAGTCTCTTCTCCCCTGAGAACACATCACATCATA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102667141 1722 - 106955855 M a score=627517.000000 s hg38.chr19_GL949748v2_alt 93300 260 + 1064304 AAGCTCATGCTTCTTAAGTCCTTCCTGTG-----TGCTGAGC--TTACTGATCATGATAGGACTCAGCTTGAGgtttcccagacttcactgattcacatgaccggttacagggtttttgccacatctataagccgcttatcctattatttgcttaacatattctttgagtcta-ggactttttttcttaaattt-atctgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa s panTro4.chr19 59026868 257 + 63644993 AAGCTCATGCTTCTTAAGTCCTTCCTGTT-----TGCTGAGC--TTACTGATCATGATAGGACTCAGCTTGAGgtttcccagacttcactgattgacatgaccggttacagggtttttgccacatctgtaagccgcttatcctatt---tgcttaacatattctttgagtcta-ggactttttttcttaaattt-atctgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904710 260 + 60714840 AAGCTCATGCTTCTTAAGTCCTTCCTGTG-----TGCTGAGC--TTACTGATCATGATAGGACGCAGCTTGAGgtttcccagacttcactgattcacatgaccggttacagggttttcgccacatctataagccacttatcctattatttgcttaacatattctttgagtcta-ggactttttttcttaaattt-atccgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952233 256 + 64156825 AAGCTCATGCTTCTTACGTCCTTTCTGTG-----TGCTGAGC-----CTGGTCATGTTGGGACTTAGCTTGAGGGttcccagacttcactgatgcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaagcaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956175 256 + 59248254 AAGCTCATGCTTCTTACGTCCTTTCTGTG-----TGCTGAGC-----CTGGTCATGCTGGGACTTAGCTTGAGGGttcccagacttcactgattcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaagcaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086143 256 + 51301725 AAGCTCATGCTTCTTACGTCCTTTCTGTA-----TGCTGAGC-----CTGGTCATGCTGGGACTTAGCTTGAGGGTTCCCAGACTTCACTGATTCACATGACCGGTTACAGGGTTTTTGCCACATCTATAAGCCACTTGTCCTATTATTTGCTTAACATATTCTTTGAGTCTG-Ggactttttctcttaaattt-atcTAAGAAGGAAGCAAATTGCTACCATGAATGGAAAACTGGTATCATTT-GCAAAGACAAAGTCACcgtataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794000 261 + 50890351 AAGCTCATGCTTCTTACATCCTTCTTACGTCCCATGCTGAGC-----CTGGTCATACTGGGACTTAGCTTGAGGGttcccagacttcactgattcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaaggaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367094 257 + 49145316 CAGCGCAT-CTTCTTAAGTCCTCACTGTG-----TCCTGAGT--TTGCTAATCACGATGGGACTTAGCTTGAGTtttcccagactcc-cagattcacatgaccagttacagggttttggccacatctagaagccacttgtcct-ttaattgcttaacatattctttgagtcta-ggtcttttt-tcttaaatttgatctacaaaggaagcaaactgctgccatgaatgggaaactggcatcacttggtaaagacgaagtcaccatgtga i calJac3.chr22 C 0 C 0 s canFam3.chr1 19590386 252 - 122678785 AAGCTGATGTTCCTTAAGTCCTTGCTCCG-----TGCTGAGCACTTACTAACTGCAGTAGGACTTGCCTCAAGATTCCTCCGGCTTC--------ATGTGACTGCTT--GAGGGtcttgccacatctgtgaa-cacttgttttgttttttacttaatttttttttcaaatcagtgtactcttttctttgaattt-acctaaaaaggaaagttattgctactgcgagtagaaaactggtatcacttggtaagtagagagtaattctaaaa i canFam3.chr1 C 0 I 87 e mm10.chr7 3631070 1141 + 145441459 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=35082.000000 s hg38.chr19_GL949748v2_alt 93560 19 + 1064304 aaatagatataTAATTATT s panTro4.chr19 59027125 19 + 63644993 aaatagatataTAATTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904970 19 + 60714840 aaatagatataTAATTATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952489 19 + 64156825 aaatagacataTAATTATT i rheMac3.chr19 C 0 I 8 s macFas5.chr19 54956431 19 + 59248254 aaatagatataTAATTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086399 13 + 51301725 aaatagatatatt------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794261 19 + 50890351 aaatagatataTAATTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367351 19 + 49145316 aaataaatacGTGATTATT i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=4103.000000 s hg38.chr19_GL949748v2_alt 93579 8 + 1064304 TAGGAACC s panTro4.chr19 59027144 8 + 63644993 AAAGAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904989 8 + 60714840 AAAGAACC i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46794280 8 + 50890351 AAAGAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367370 8 + 49145316 AGAGCATC i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M e papAnu2.chr19 47086412 0 + 51301725 C e macFas5.chr19 54956450 0 + 59248254 C e rheMac3.chr19 59952508 8 + 64156825 I a score=76938.000000 s hg38.chr19_GL949748v2_alt 93587 295 + 1064304 ACCTAAggccgggcgccgtggctcacgcctgtaatcccagcactttgggaggcggaggcaggtggatcatgagttcaggagatcgagaccatcctggctaacacggtgacaccccgtctctactaaaaatacaaaaaattagccaggcgtggtggcggg-----tgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaa s panTro4.chr19 59027152 295 + 63644993 ACCTAAggctgggcgcagtagctcacccctgtaatcccagcactttgggaggccgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgacaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcggg-----tgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904997 300 + 60714840 ACCTAAggccgggtgcagtagctcaggcctgtaatcccagcactttgggaggctgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaagccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggtgccttgcctgtagtcccagctattcaggagggtgaggcaggagaatggcgtgaacctgggaggcagagcttgcagtgagccgagatcgtgccactgcactcctgcctgggagacagagcaagattccgtctcaaaaaaaa i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e calJac3.chr22 45367378 0 + 49145316 C e nomLeu3.chr10 102667141 1722 - 106955855 M e chlSab2.chr6 46794288 0 + 50890351 C e papAnu2.chr19 47086412 0 + 51301725 C e macFas5.chr19 54956450 0 + 59248254 C e rheMac3.chr19 59952508 8 + 64156825 I a score=2554.000000 s hg38.chr19_GL949748v2_alt 93882 8 + 1064304 aaaa----------aata s panTro4.chr19 59027447 8 + 63644993 aaaa----------aata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905297 18 + 60714840 aaaaaaaaaaaaagaaTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54956450 8 + 59248254 AAAG----------AATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086412 8 + 51301725 aaag----------AATC i papAnu2.chr19 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e calJac3.chr22 45367378 0 + 49145316 C e nomLeu3.chr10 102667141 1722 - 106955855 M e chlSab2.chr6 46794288 0 + 50890351 C e rheMac3.chr19 59952508 8 + 64156825 I a score=333780.000000 s hg38.chr19_GL949748v2_alt 93890 152 + 1064304 aCCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCAGACTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttt------ttttccttgagatagagtctccctctgtcgcccaggctggagt s panTro4.chr19 59027455 152 + 63644993 aCCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCACACTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttt------ttttccttgagatggagtctccctctgtcacccaggctggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905315 153 + 60714840 ACCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCAGATTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttctattttttt------ttttccttgagatggagtctccctctgtcacccaggctggagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952516 157 + 64156825 ACCTAAAACCTTTTCTTACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttc--ttttttttttccattttccttgagacggagtctccctctgttgcccaggctggagt i rheMac3.chr19 I 8 C 0 s macFas5.chr19 54956458 158 + 59248254 ACCTAAAACCTTTTCTTACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086420 158 + 51301725 ACCTAAAACCTTTTCTCACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACcattcctattct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794288 158 + 50890351 ACCTAAAACCTTTTCTCACTTCCAAATTGAGAGAATACTAGCTTATCTCCTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367378 156 + 49145316 ATCTAAAAGCTTTTCTCACTTCCACATTTCGGGAACACTGGCTTATCTCTTGAGTAGTCAGACT--GTCTTA-GAGGGCAGTTCTGTTACCACTCCCAttctctctcttttttattttttcctttcgacagagtctcactctctcgcccaggctggagt i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=734064.000000 s hg38.chr19_GL949748v2_alt 94042 248 + 1064304 gcagtgatgtgttcttggctcattgcaacctccacctcccgggttcaagcgattctcctccctcagccttatgtatagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagatggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtaatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT s panTro4.chr19 59027607 248 + 63644993 gcagtgatgtgatcttggctcattgcaacctccacctcccgggttcaagcgattctcctccctcagccttatgtatagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagatagg--gttttaccatgttgaccaggctagtctcgaactcctgacttcaagtaatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905468 248 + 60714840 gcagtgatgtgatcttggctcattgcaacctctgcctcctgggttcaagcgattctcctccctcatccttatgtgtagctgggattacagttgtgcaacaccatgcctagctattttgta--ttttttagtagagacggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggccTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102668863 247 - 106955855 gcagtgatatgatcttgg-tcattgcaacctctgcctcccgggttcaagcgattctcctccctcagcgttatgtgtagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagacggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtaatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT i nomLeu3.chr10 M 1722 C 0 s rheMac3.chr19 59952673 248 + 64156825 gcagtgatgtgatcttggctcactgcaacctctgcctcccgggttcaagtgagtctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956616 248 + 59248254 gcagtgatgtgatcttggctcactgcaacctctgcctcccgggttcaagtgagtctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctgctctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086578 248 + 51301725 gcagtgatgtgatcttggctcactgcaacctctacctcccgggttcaagtgattctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccagcctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794446 248 + 50890351 gcagtgatgtgatcttggctcactgcaacctctgcctcccaggttcaagtgattctcctccttcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggctaggctggtcccgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggccTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367534 252 + 49145316 gcagtggtatgatcttggctcattgcaacctccacctcccaggttcaagcgattctcctgcctccgcctcccgagtagctgggattacaggcatgcaacaccatgtctggctattttgtattttttttagtagagacggggtgtttcaccatgttggtcaggctggtcttgaacctctgacctcaagtgaccagcccacctcggcctcccaaagtgccaggattacaggcatgagccactgctcctggccTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I a score=1749891.000000 s hg38.chr19_GL949748v2_alt 94290 574 + 1064304 CCCATTCTTCTT-----------------GAATGGAATTTGTTGATGACAGGAAGCCATAGGAGGTTTCTGGGGAAAGAAGTGTAGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACctg-ggcacccagttg--------------------------------aatcgcccaggtctttgctctcaaagtactcaaggtctagtggaagaggcaggccaggttccagacagctatcagt-ggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagg-aagaatcgatagctgaattggactgtagagcatgaatgcatgtgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggcccggggcctcagatatccggagagaga---------------------------atcctgcagagttccagATGCCAGGCCAAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCCGGTGTCTGGTTGAGGAGGCAGAGGTGAAACATCTCACAAGCT-GTGGCAGTCCCTG s panTro4.chr19 59027855 561 + 63644993 CCCATTCTTCTT-----------------GAATGGAATTTGTTGATGACAGGAAGCCATGGGAGGTTTCTGGGGAAAGAAGTGTAGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACctg-ggtacccagttg--------------------------------aatcgcccaggtctttgctctcatagtactcaaggtctagtggaagaggcaggccaggttccagacagctatcagt-ggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccagatgtcagggaagaatcgatagctgaattggactatagagcatgaatgcatgtgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggCCCGGGGCCTCAGATATCCAGAGAGA-----------------------------------------TCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCCAGTGTCTGGTTGAGGAGGCAGAGGTGAAACATCTCACAAGCT-GTGGCAGTCCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905716 577 + 60714840 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACGACACAAAGTCATGGGAGGTTTCTGGGGAAAGAAGTGTCGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACCTg-ggcacccagttg--------------------------------aatcgcccagttctttgctctcaaagtgctcaaggtctagtggaagaggcaggccaggttccagacagctatcggcgggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagggaagaatcgatagctgaattggactgtagagcatgaatgcatgtgccaggtaaagaaagggagaagggggccca-----------------gggaaagatagctgcaggcctggggtctcagacatccagagagaga---------------------------atcctgcagagtTCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCCGGTGTCTGGTTGAGGAGGTAGACGTGAAACATCTCACAAGCTGGTGGCAGTCCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669110 573 - 106955855 CCCATTCTTCTT-----------------GACTGGAATTTGTAGACAACAGGAAGCCATGGGAGGTTTCTGGGCAAAGAAGTGTAGTGAG-AGGGCAGCGTTTCAGG-AGACTCACTGCTTG----CTT-----TAACGTTTACCTg-ggcacccagttg--------------------------------aatcgcccaggtctttgctctcaaagtgctcaaggtctagtggaagaggcaggccaggttccagacagctgtcggcgggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagggaagaatcgatagctgaatgggactgtagagcatgaatccatgcgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggCCCGGGGTCTCAGACATCCGGAGAGAGA---------------------------ATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTTAGGCCAGGCTCAGGGATGGAGTCAGACCCCATCACACCCGGTGTCTGGTTGAGGAGGTAGACGTGAAACATCTCACAAGCTCGTGGCAGTCCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59952921 597 + 64156825 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGGG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTACTTGCTT-----TAAGGTTTACCTG-GGCACCCAGTTG--------------------------------AATTGCccgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccgggttccagacagctgtcggcgggtggtacc--------------aggctggggacgctggagtcacaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagcggC-GGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGCAAAAACACCAGATCCTGCAAAGTTCCAGAGGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAGGCAGGTGGCAGTCCCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956864 593 + 59248254 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGGG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTACTTGCTT-----TAAGGTTTACCTg-ggcacccagttg--------------------------------aattgcccgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccgggttccagacagctgtcggcgggtggtacc--------------aggctggggacgctggagtcacaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagcggC-GGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCACCAGATCCTGCAAAGTTCCAGAGGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAGGCAGGTGGCAGTCCCCG i macFas5.chr19 C 0 I 174 s papAnu2.chr19 47086826 591 + 51301725 cccaTTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGAG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTGCTTGCTT-----TAAGGTTCACCCA-GGCACCCAGTTG--------------------------------AATCGCCCGGGTCTTTGCGCTCAACATGCTCAAGGTCTAGTGGAAGAGGCAGGCCAGGTTCCAGACAGCTGTCGGCGGGTGGTACC--------------AGGCTGGGGACGCTGGAGTCACAGGAGGGACTGGCTGACCCTGCCCCAGGTGCCAGGGAAGAATCGATAGCTGAATTGGACTCTAGAGCGTGAATGCATGTGCCAGgcaaagaaagggagaa---ggcCC-----------------------AGACAGCGGCAGGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCGCCAGATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCATACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAAGCAGGTGGCAGTCCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794694 594 + 50890351 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAATCCATGGGAGGTTTTTGGGGGAAGAAGTGTAGTGAG-AGTGCAGAGTTTTGGG-AGACTCACTGCTTGCTTGCTT-----TAAGGTTTACCTg-ggcacccagttg--------------------------------aatcgcctgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccaggttccagacagctattggcgggtggtacc--------------aggctggggacactggagcctcaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagtggCAGGCCTGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCGCCAGATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCATCCGGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAAGCAGGTGGCTATCCCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367786 614 + 49145316 CCCATTCATCTT-----------------GAATGAAATTTCCTGACAACAGGAAGCCATGGGAGGTTGCTGGGCAAAGACGTGT-GTGAG-AAAGCCGAGTTTCAGG-AGACCCACTGCCTGCTGTCTT-----TAATGTTTACctg-ggcacccagtgg--------------------------------aaacccccaggtctgtgctct-aatgtgctcaaggtctggtggaagaggcaggccaagttccagacagctgtcagtgggtgatacc--------------aagctggggccactggagccacaggagggactggctgaccctgccccaggggtcagggaagaattgatggctgaactggactctagagcatgaatgcatacgccaggggaagaaagggaggaaggggcctgggaaagaaaaGGGGGCCGGGAAAGAAAGCGGCACGCCCAGGGCCTCAGATACTAGGAGTGAGAGGGCGGGCTCAGGAAT----GTGCCAGATCCTGCAGGGTTCCAGATGCCAGGCCGGGGAACTTCTCCATCCAGAGAGTTATGGGACACAG--AAGGTGACATTTCCTGATGTCAGGCCAGGAGCAGGGAT-GAGTCAGATCCCGTCATACACGGTGTCTGGTTGGAGAGGTAGTCATGAAACATCTCACAAGCAGGTGGCAGTTCCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19590725 634 - 122678785 CCCATTCTTCTTAACAGTTTGGAGTTCCGGAATGGAATTCATTGGCAG-AGGCAGCCATGGGAGGTTG-TCAGTGCAGCAGTGGTGTGGGCAGAGCAGAGTTGCAGGCAGACCTACTCTTTCCTTCCTTCCTTGTAAAGTTTTCATGAGGTGCCCTGTGGCAAGCCCGCATGGGCACTGGGTGCACTGGGGAACCCACCCAACTCTCTGCTCTCAGGATACTCGGTGTCTGGCAAAGCGGATAGGTCAGG-TCTGGGCAGTGGTT-GTGGGCGGTGCCTGCTGGGGTGGGGAGAGCTGGGGGCATTGGAGCCACCAGAGCGG--GGCTGACCCTGCCTCAGG--------------CCATACCTGAAATTGGCTTTGAAGCATGAATACACATACCAGGCCAAGAACAGCAGCTATATGCCCT-----------------GAGAAAGAGAACTGTGTGTGCAAAGCCTCACATGTCTGGAGTGGCAGAGGCAGCAGGAGAAA----GTGCCAGATCCTGCAGGATTTTGAGCACCAGG-----------------CCAGCGAGCTGTGGGGAGCGGTAGAAGGGACACTCCCTGATGTCGGGTCAGGCTCGGAGTTAG-GTCAGACCTGATCTCACCTGGTgtttggtggaggaggtgaacacagaacacctccaacctgggtggcggttatg- i canFam3.chr1 I 87 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=109212.000000 s hg38.chr19_GL949748v2_alt 94864 34 + 1064304 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA s panTro4.chr19 59028416 34 + 63644993 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906293 34 + 60714840 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669683 34 - 106955855 TTTATTGGAGAT-GCACAAGTGCTGCGGGTACACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953518 34 + 64156825 TTTACTGGAGGT-GCACGAGTGCTGCGGGCACACA i rheMac3.chr19 C 0 I 232 s macFas5.chr19 54957631 34 + 59248254 TTTACTGGAGGT-GCACAAGTGCTGCGGGCACACG i macFas5.chr19 I 174 C 0 s papAnu2.chr19 47087417 34 + 51301725 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795288 34 + 50890351 TTTACTGGAGGT-GTGCAAGTGCTGCGGGTACACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368400 32 + 49145316 TTTATTGGAG---GCACAAGTGCTGCAGGTACCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591359 35 - 122678785 tctaacggatgtggcaggagttccgcaggagcaca i canFam3.chr1 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=522952.000000 s hg38.chr19_GL949748v2_alt 94898 169 + 1064304 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggagtgcagactctgacgccgccctgcctggtgtcagatctgagctctgccttctactgg--ctgtgacatcaggc s panTro4.chr19 59028450 169 + 63644993 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggaacacagactctgaagccaccctgcctggtgtcagatctgagctctgccttctactgg--ctgtgacatcaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906327 169 + 60714840 GAGGAGGCGTCTGATCCTTCCAGAATGGGAGGGAAGGATTCTGGGTCGCTGCCTGAGTCTTAAGGGCTTAAAGAGCCGTTTGagc-atcagggttaggaacccagactctgaagccgccctgcctggggtcaggtctgagctctgccttctactgg--ctgtgGCATGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669717 168 - 106955855 GAAGAGGCGTCTGATCCTTCTGGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAG-CATTTGagc-atcagggttaggaacacagactctgaagccaccctgcctggggtcagatctgagctctgccttctactgg--ctgtgacatcaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953784 167 + 64156825 GAGGAGGCGTCTGATCCTCCCAGACAGGGAGGGAAGGATTCTGAGTCACTGCTGGAGTCTTAAGGACTTAAAGAGCCTTTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtaaggtctgagctctgctgtctactgg--cggtgacatcagac i rheMac3.chr19 I 232 C 0 s macFas5.chr19 54957665 167 + 59248254 GAGGAGGCGTCTGATCCTCCCAGACAGGGAGGGAAGGATTCTGAGTCACTGCTGGAGTCTTAAGGACTTAAAGAGCCTTTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtcaggtctgagctctgctgtctactgg--cggtgacatcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087451 167 + 51301725 GAGGAGGCATCTGATCCTCccagaaagggagggaaggattCTGAGTCACTGCCGGAGTCTTAAGGACTTAAAGAGCCTTTTGAGC-ATCAGGGTTAGGAACAC--ATTCTGAAGCCACCCTGCTTGGGGTCAGGTCTGAGCTCTGCTGTCTACTGG--CTGTGACATCAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795322 167 + 50890351 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCACTGCCGGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtcaggtctgagctctgctgtctactgg--ctgtgACATCAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368432 155 + 49145316 GAGAAGGCATCTGATCCTTCCGGAAAGGGAGGGAACGGTTCTGAGTCGCTGCCTGAGTCTTAAGCACCACAAGAGCCATTTGagc-atcagggttaggagcacagactctgcagccaccctgcctggggtcagatttgagctct----------------gtgacATCAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591394 154 - 122678785 gaggagacatctgaccctcctgaagggggagggaaggatcctgaggtgctgtctgagTCTCAAGA---TGCAGAAACATTTGAGTGATCAGggttaagaatgcaggtgc---------------tggggctagatctcaggtctgccatctgctgggtccatggctttaggc i canFam3.chr1 C 0 I 259 e mm10.chr7 3631070 1141 + 145441459 I a score=456153.000000 s hg38.chr19_GL949748v2_alt 95067 159 + 1064304 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tgtgggctcaggcgttcctgcctcagcctccca s panTro4.chr19 59028619 156 + 63644993 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct----------gggctcaggcgttcctgcctcagcctccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906496 159 + 60714840 AGTTAGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tctgggctcaggcgttcctgcctcagcctccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669885 159 - 106955855 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tctgggctcaggcattcctgcctcagcctccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953951 155 + 64156825 agttaGTATTTGTATGACATTTAAACACAACAtc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcgcagctcactgcagccttgacct-------tctgggctcaggtgttcctgcctcagcctccca i rheMac3.chr19 C 0 M 136 s macFas5.chr19 54957832 155 + 59248254 agttaGTATTTGTATGACATTTAAACACAACAtc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcacagctcactgcagccttgacct-------tctgggctcaggtgttcctgcctcagcctccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087618 155 + 51301725 AGTTAGTATTTGTATGACATTTAAACAcaacatc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccggaatgcagtggcacgatcacagctcactgcagccatgacct-------tctgggctcaggtgttcctgcctcagcctccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795489 156 + 50890351 ----AGTATTTGTATGACATTTAAACACAACAtcttttttttttgtttgttttttgagacagggtctcactctgtcacccaggccggaatgcagtggcacgatcacagctcactgcagccttgacct-------tctgggctcaggtgttcccgcctcagcctccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368587 159 + 49145316 AGTGAG----TGTATGACATTTAAACACAGCATC---ACtttttgtttgttttttgagacagggtctcactctgaca-ctaggtgagaatgcagtggcatgaacgcagctcactgcagccctgaccttctgggttctgggttccggcgttcctgcctcagcctccca i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=327248.000000 s hg38.chr19_GL949748v2_alt 95226 145 + 1064304 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt s panTro4.chr19 59028775 145 + 63644993 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906655 144 + 60714840 ggcagctgggaccacaggtgtacacc-ccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670044 140 - 106955855 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-tt-----tttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54957987 146 + 59248254 ggcagttaggaccacaggcatacaccaccatgcctggctaattattttttctttaattatttgtagagatggggtctccctatgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087773 146 + 51301725 ggcagttaggaccacaggcatacaccaccatgcctggctaatttttttttctttaattatttttagagatggggtctctctatgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795645 146 + 50890351 ggcagttaggaccacaggcatacaccaccatgcctggctaattattttttctttaattatttgtagagatggggtctccctgtgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368746 143 + 49145316 gatagctaggaccacaggcatacaccaccatgcctggctcatt-ttttttctttaattatctgtagagatgggatc-ccctgtgtcgcccagtttgctctgaaac-actgggctcaagcagttctccagcctgcgcctcccaaagt i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I e rheMac3.chr19 59954106 136 + 64156825 M a score=95902.000000 s hg38.chr19_GL949748v2_alt 95371 30 + 1064304 gctgggattacaggtatgagccactgtgcc s panTro4.chr19 59028920 30 + 63644993 gctgggattacacttatgagccactgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906799 30 + 60714840 gctgggattacaggtatgagccactgtgcc i ponAbe2.chr19 C 0 I 118 s nomLeu3.chr10 102670184 30 - 106955855 gctgggattacaggtatgagccactgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954243 30 + 64156825 gctaggattacaggcgtgagccactgtgcc i rheMac3.chr19 M 136 C 0 s macFas5.chr19 54958133 30 + 59248254 gctgggattacaggtgtgagccactgtgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087919 30 + 51301725 gctgggattacaggtgtgagccactgtgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795791 30 + 50890351 gctgggattacaggtgtgagccactgtgcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368889 30 + 49145316 gctgggattacaggtgtgagccactgtgcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=34557.000000 s hg38.chr19_GL949748v2_alt 95401 16 + 1064304 -tgaccTCTTATTActa s panTro4.chr19 59028950 16 + 63644993 -tgaccTCTTATTActa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102670214 16 - 106955855 -tggccTCTTATTActa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954273 16 + 64156825 -tggccTCTTATTActa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958163 16 + 59248254 -tggccTCTTATTActa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087949 16 + 51301725 -tggcctcttattACTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795821 16 + 50890351 -tggccTCTTATTACta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368919 17 + 49145316 tggccCCCTTATAACCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I e ponAbe2.chr19 55906829 118 + 60714840 I a score=1010476.000000 s hg38.chr19_GL949748v2_alt 95417 391 + 1064304 aagcacaaagaagcgttttccagaaacagacgtggggtaagggatgctctggggagagggagcagcacatgcagaggccaggaggggtctggcgcggtggctcacgcctgtcatcccagcactttgggtggtcaaggcagatggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaacaaacaaaaaaaattagccgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcatgccactatactctagcctgggcaaccagagcgaaattatgtctcaaaaaaaaaa-aa s panTro4.chr19 59028966 388 + 63644993 aagcacaaagaagcgttttccagaaacagacgtggggtaagggacgctctggggagaaggagcagcacatgcagaggccaggaggggtctggcgcggtggctcacgcctgtcatcccagcactttgggtggtcaaggcagatggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaaaa-aaaaaaaattagctgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcatgccactatactctagcctgggcaaccagagcgaaattatgtctcaaaaaaaaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906947 378 + 60714840 AAGCACAAagtagcgtttcccagacacagaca-ggggt-agggacgctct-gggagagggaacaccacatgcaaagccca-gaggggtcgggcgt-gtagcttacgcctgtcatcccagcactttgggtggtcaaggcaggtggatcacctgaggttgggagttcgagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaa------aaaaaaaattagttgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactatactctagcctgggcaacaagagcgaaattatgtctcaaaaaaaaaa--- i ponAbe2.chr19 I 118 C 0 s nomLeu3.chr10 102670230 390 - 106955855 aagcacaaagaagcgttttccagaaacagacatggggtaagggacgctctggggagagggaacagcacatgcaaaggccaggaggggtctggcatggtggctcacgcctgtcatcccagcattttgggtggtcaaggcaggtggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccctgtctgtactaaaaatataaaaaa--aaaaaaaattagctgggcgtggtggtgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcatgccactatactctagcctgagcaacaagagcgaaattatgtctctaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954289 378 + 64156825 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaagtccaagaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggccaaggctggtggatcacctgaggtcgggagttcgagatcagtctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttcgcggggcgtggtggcgggcgcctgtaatcccaactacttggggggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgatactccatctc-aaaaaaaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958179 379 + 59248254 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaaggccaagaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggccaaggctggtggatcacctgaggtcgggagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcagggcatggtggcgggcgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgacactccatctcaaaaaaaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087965 379 + 51301725 AAGCACAAAGAAGGGTTTTCCAGAAATAGACATGGGGTAAGGGACGCTCTGGGGagagggaacagcatatgcaaaggccaGGACGGGCcttgcatggtggctcatgcctgtcgtcccagcac--tGGGTggtcaaggctggtggatcacctgaggttgggagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcggggcatggtggcgggtgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgacactccatctcaaaaaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795837 379 + 50890351 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaaggccaggaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggtcaaggctggtggatcacctgaggtcgagagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcgggggatggtggcgggcgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgaaactccatctcaaaaaaaaaa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368936 353 + 49145316 AAGCACAA---AGGGTTTTCtggaaacagacgtg-----------------gggagacggaacagcatatgcagaggccaggaggggccagatgcagtgggtcacccctgtaaccccaccactgtggggggcccaggcgggcggatcacctgaggttgggagttcgagaccaacctggccaacatggtgaaaccccatctctactaaaaataccc------ccaaaaatttagctgggcatggtggcacatgcctgtaattccacctactgaggaggcccaggc---agaattgcttgaacctgggaggcggaagttgcagtgagccgagatggtgct------ctgtagcctgggcaacaagagcgaaactccg-agaaaaaaaaaaa--- i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=157140.000000 s hg38.chr19_GL949748v2_alt 95808 52 + 1064304 aaaggctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatggct s panTro4.chr19 59029354 50 + 63644993 ---ggctaggaggagtgggtgt-----------ctgtgatcactgtgatcactcctttatggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55907325 51 + 60714840 -aaggctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670620 52 - 106955855 aaagcctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954667 49 + 64156825 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958558 49 + 59248254 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47088344 49 + 51301725 ---ggccaggaggAGTGGGTAT-----------CTGGGG-CACTGTGACCAGTCCTTTATGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46796216 49 + 50890351 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45369289 49 + 49145316 ---ggccaggaggagtgggtgt-----------ccaggg-cactgcaatcagtcctttgtggct i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591807 63 - 122678785 agaggcccagaggagaggaagcagccctgagtgctcggg-cactgcagtcagtccttcctggct i canFam3.chr1 I 259 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=5351595.000000 s hg38.chr19_GL949748v2_alt 95860 1748 + 1064304 ggagtggaataaaatga-ggtgt---------ggtgagaggatggggcgggaagggcg-ggaggccag-actgCAGAGCTGCTGAGtcagcaaacaggaacgggggaactccctgtgtgccaggtgctgtcctgggtactc---ggctgtgggtacagccaacgcaggcacagcactggtccctgcagagcttccggagttggggaggcCCTGAATGTCAGTCTGAGGA-CTCG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACGGTCAGTTCTGGGGT-AGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAACTTCATCCTCCGCCTCCTCCAGCTGCGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCCGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTGACCTGCTGTCACAGagtggctgaaataagaaggaagtgcgttct---ctcg--------------------------------------------cgtatgagtctgag-gagca-ctcggggatggtgtggccgcttggctgcctgtagggccccggctctttccatcctgttggtcggccacctgcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--tc-ttttctttaagaaca-------------------tg------------------tcactg-----cagctcacgttttacagac-----cagaactaattcccctggtcacacctagcggtaaggacggctgagaa----aggctgtatgct-ggtgcccgtgtgccaggccacaagccagggcttcagttactaaaggaagaag--gggacatgggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACAACCTCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GTGGGGTG-----------------------------CTTCTG-------CTGGCGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTCGGACCCCCTCCCAGAGGCCTCAG-------------------GGTCTGGAGACGATGGAGAGGAGTGGACGAGGGCTCAGTGGT-CTGCTCTGCCCAGCGTGGGAGGGACGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCAACCCC-------------------------AGTCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCACGCTGCTCCCGCTGTGGTTGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACACGGAGATTTGGGGCAGAGAGACGTC-TAAGTGCAGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGT---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCAGGTGTGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCACGCATGTCCAGGAAAGGATTAGGATG s panTro4.chr19 59029404 1713 + 63644993 ggagtggaataaaatgg-ggtgt---------ggtgagaggatggggcgggaagggca-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtacagccaacgcaggcacagcactggtccctgcagagcttctggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTCG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CTGTAGGAGGTTTCA----CACGGTCAGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAACCTCATCCTCCGCCTCCTTCAGCTGCGGGACCCGAGAGGGGGTAGGGAGTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCACCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAATGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCTGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTCACAGagtggctgaaataagaaggaagtgcgttct---ctcg--------------------------------------------cgtatgagtctgag-gagca-cttggggatggtgtggccgcttggctgcctgtagggccccggctctttccatcctgttggtcggccacctgcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--tc-ttttctttaagaaca-------------------tg------------------tcactg-----cagctcacgttttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaa----agcctttatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaaggaggaag--gggacatgggtgttagggccaaccagcagagtctatcTTCCATCTCACCCGACAACCTCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GTGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTCGGACCCCCTCCCAGAGGCCTCAG-------------------GGTCTGGAGACGATGGAGAGGCGTGGATGAGGGCTCAGTGGT-CTGCTCTGCCCAGCGTGGGGGGGACGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCTACCCC----------------------------------------------CGCTG-----GCCTGA----------------------------CCCACGCTGCTCCCGCTGTGGTCGGAGCCGGTGGCATT-GG--------------GGTTGACACAGGG-CAGGCACACGGAGATTTGGGGGAGAGAGACGTC-TAAGTGCGGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------AGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCAGGTGTGCGTGAGGGCTGGGA----GAGGAGGAGGTCCCCACGCGTGTCCAGGAAAGGATTAGGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55907376 1844 + 60714840 ggagtggaataaaatgg-gatgt---------ggtgagaggatggggtgggaagggcg-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtatagccaacacaggcacagcactggtccctgcagagcttccggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTTG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACAGTCAGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGTCGTCAGCCTGTCGCCTGGTTTACTCT-----------------------------------------TCAGCCCCTCCGTCCTGACCCCTCCCAGCCTCATCCTCCGCC-----------------------------------------CCCTCCAGCTGCGGGACCCAGGAGGCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCGTCCTGA-CCCCTCCCAGCCTCATCCTCCATCTCCCCCAGCTCTGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCT------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCG------CAA-----GCTCAGATCAAGGTTCACCTGCTGTCACAGAGTGGTTGAAATAAGAAGGAAGTGCGTTCT---CTCG--------------------------------------------CGCATGAGTCTGAG-GAGCA-CTCGGGGATGGTGTGGCCGCTTGGCTGCCTGTAGGGCCCCGGCTCTTTCCATCCCGTTGGTTGGCCACCTGcctcacggtgcaaggtgactgccccacctccagccatcacctttgcattcccaccagca----------------aggcgct--tc-t----tttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctaagaaatggaggctgtatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaaggaagaag--gggacattggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GCGGGGTG-----------------------------CTTCCG-------CTGGTGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTTGGACCCCCTCCCAGAGGCCTCGG-------------------GGTCTGGAGACGATGGAGAGGAGTGGGTGAGGGCTTAGTGGC-CCAGTCTGCCCAGCGTGGGAGGGACAGAGCCTGGACAGGACGT----------TCTCAGGGCTCCCCTCCTAACCC-------------------------GGTCTCCCGAGAGGGCGTCCCCTCTG-----GCCTGA----------------------------CCCGTGCTGCTCCCACTGTGGTCGGAGCGGGTAG-ATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGACGTC-TAAGTGCGGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGATGG-GGAAGAGGTTGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTTGG---------AAAAGA--GGGGCGGGTGCGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCATGCGTGTCTAGGAAAGGATTAGGATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670672 1748 - 106955855 acagtggaataaaatgg-gatgt---------ggtaaggggatggagtgggaagggcg-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtatagccaacgcaggcacagcactggtccctgcagagcttccggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTTG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACGGTCGGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAGCCTCATCCTCCATCTCCCCCAGCTGCGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--TTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GTGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTCCCCTGCTGTCACAGAGTGGCTGAAATAAGAAGGAAGTGTGTTCT---CCCG--------------------------------------------CGCATGAGTCTGAG-GAGCA-CTCGGGGATGGTGTGGCTGCTTGGCTGCCTGTAGGGCCCCGGCTCTTTCCATCCCGTTGGTCGGCCACTTGcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--cc-ttttctttaagaaca-------------------tg------------------tcactg-----ccgctcacagtttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaaatggagcctgtatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaa----gaag--gggacatgggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCGCTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGAAG----------------GCGGGGTG-----------------------------CTTCCG-------CTGGTGTGAAGGGGCTGGCGGGGCTCA---------------------CTCTCGGACCGCCTCCCAGAGGCCTCGG-------------------GGTCTGGAGACGATGGAGAGGAGTGGACGAGGGCTCAGTGGC-CTGCTCTGCCCAGCGTGGGAGGGATGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCTACCCC-------------------------CGTCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCATGCTGCTCCCACTGTGGTTGGAGCCCGTGGCATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACGTGGAGATTTGGGGGAGAGAGACATC-Taagtgcgaagagctgaa---------------------------------ga-gggaac-------------------------------------------------aagc---------------gaggaggaagTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ATGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAGAGA--GGGGCGGGTGCGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCACGCGTGTCCAGGAAAGGATTAGGATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954716 1879 + 64156825 gga-------------------------------tgagaggatggggtgggaagggtg-ggaggccag-accgcagagttgctgagtcagcagagaggaactgggcagctccctgtgtgccaggtgctgtcccgagtactc---gggtgtgggtgtagataacgcaggcacagcactggtccctgcagagctTCTGGAGTTGGGCAGGCCTTGAATGTCAGTCTAGGAA-CTTG---------GTCATTAGCCTTGGGGCTATGGGGAG-CCATAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCTTCAACCCCTCCTTCCTGACCCCCTCCAGCCTCGTCCTCCGCC----------------------------------------------------------------------------------TCCTCCAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGAGTGGTGTAAGTAAGAAGGAAGTGTGTTCTCC-CTCACGTATGAGTCTGAGCGAGCACTCGGGGACGGCGTGGCTCCCTCGCGTATGAGTCTGAGCGAGCA-CTCGGGGACGGCGTGGCCGCTTGGCTGCCTGTAAGGCCCCAGCCCTTTCCATCTTGTTGGTCGGCCACCTGCCTCGTGGTGCGAGGGGACTGCCCCACGTCCAGCCGTCGCCTCTGCATTCCCACCAGCA----------------AGGCACT--TC-TTTTTTTTAAGAaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgaaaaatggagcctgtatgct-ggtgcccgtatgccaggctacaagccagggcttcagttactaaaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCCGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGCGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGGTGAAGGAGAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGGGTGAGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGGCTCCCCTCGTACCCC-------------------------AATCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCGCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTCGTCACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGATGTGTTAAGTATGGAGAGCCGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGC-GGAAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTTATGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCAGGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAGAGGATCAGGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958607 1835 + 59248254 gga-------------------------------tgagaggatggggtgggaagggtg-ggaggccag-accgcagagttgctgagtcagcagagaggaactgggcagctccctgtgtgccaggtgctgtcctgagtactc---gggtgtgggtgtagataacgcaggcacagcactggtccctgcagagctTCTGGAGTTGGGCAggccttgaatgtcagtctaggga-cttg---------gtcattagccttggggctatggggag-ccataggaggtttcagacagaCGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCT-----------------------------------------TCAACCcctccttcctgaccccctccagcctcgtcctccgcc-----------------------------------------tcctccAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGagtggtgtaagtaagaaggaagtgcgttctcc-ctca--------------------------------------------cgtatgagtctgagcgagca-ctcggggacggcgtggccgcttggctgcctgtaaggccccagccctttccatcttgttggtcggccacctgcctcgtggtgcgaggggactgccccacgtccagccgtcgcctctgcattcccaccagca----------------aggcact--tc-ttttttttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgaaaaatggagcctgtatgct-ggtgcccgtatgccaggctacaagccagggcttcagttactaaaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCCGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGCGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGGTGAAGGAGAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGAGTGAGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGGCTCCCCTCGTACCCC-------------------------AATCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCTCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTCGACACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGATGTGTTAAGTATGGAGAGCCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGC-GGAAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTTATGAGAAAGCCAGGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCAGGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAGAGGATCAGGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47088393 1917 + 51301725 GGA-------------------------------TGAGAGGATGGGGTGGGAAGGGTG-GGAGGCCAG-ACCGCAGAGTTGCTGAGTCAGCAGAGAGGAACTTGGCAGCTccctgtgtgccaggtgctgtccTGAGTACTC---GGGTGTGGGTATAGATAACGCAGGCACAGCACTGGTCCCTGCAGAGCTTCTGGAGTTGGGCAGGCCTTGAATgtcagtctaggga-cttg---------gtcaTTAGCCTTGGGGCTATGGGGAG-CCATAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGActggtgtggag-----------ggagagggatTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCT----------------------------------------------------------------------------------TCAACCCCTCCTTCCTGACCCCCTCCAGCCTCGTCCTCCGCCTCCTCCAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCCGAGACGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGTGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTAAGTGAGTGCT-GGGGGGAG--GCGGAGACTGCCCTCTGTGACGCCCCTCatgcccc--ctccc------------------------------------ttcccca---------------------cggGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATGGAGGTTCACCTGCTGTAACGGAGTGGTGTAAGTAAGAAGGAAGTGCGTTCTCC-CTCG--------------------------------------------CGTATGAGTCTGAGCGAGCA-CTCGGGGATGGCGTGGCCGCTTGGCTGCCTGTAAGGCCCCAGCCCTTTCCATTTTGTTGGTCGGCCACCTGCCTCGTGGTGCGAGGGGACTGCCCCACGTCCAGCCGTCGCctctgcattcccaccagca----------------aggcact--tctttttttttaagaaca-------------------tg------------------tCACTG-----CAGCTCACATTTTACAGAC-----CAGAACTAATTCCCCTGGTCACACCTAGCGGTAAGGGCGGCTGAGAAATGGAGCCTGTATGCT-GGTGCCCGTATGCCAGGCTACAAGCCAGGGCTTCAGTTACTAAAGGAAGAAG--GGGACGTGGGTGTTAGGGCCAACCAGCAGAGTCTGCCTCCCGTCTCACCTGACGCCCGCC------GTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGATGAAGGAGAGGAGCGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGCGTGGGAGGGACGGAGCCTGGATGGGACTT----------TCTCGGGGCTCCCCTCCTACCCC-------------------------AGTCTCCCGAGAGGGCTTCTCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCGCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTTGGCACAGGG-CAGGCACGCGGAGATTTGGGGGAGACAGATGTCTTAAGTATGGAGAGCCTGAGGGAGCAAGCGGGGAGGAAGCGAGGCGGGGAAGGA-GGGCACGCGGGAGAGGTCGGATCACACTGAGCCTTTGGGTCTCATGAGAAAGCCAAAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGCACGC-GGGAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTCATGAGAAAGCAAAGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCACgtgagggcaggga----gaggaggcgGTCCCCACGTGTGTCCGGGAAAGGATTAGGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46796265 1832 + 50890351 gga-------------------------------tgagaggatggggtgggaagggcg-ggaggccag-accgcagagTTGCTGAGTCGGCAGAGAGGAactgggcagctccctgtgtgccaggtgctgtcctgagtactc---gggtact----cagataacgcaggcgcagcactggtccctgcAGAGCTTCTGGAGTTGGGCAGGCCTTGAATGTCAGTCTAGGGA-CTTG---------GTCATTAGCCTTGGGGCTATGGGGAG-CTGTAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGATAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTTGCCTGCTTTACTCT-----------------------------------------TCAACCcctccttcctgaccccctccagcctcgtcctccgcc-----------------------------------------tcctccAGCTGTAGGATCTGGGAGGCAGATGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCTGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCACTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGagtggtgtgagtaagaaggaagtgtgttcttc-ctcg--------------------------------------------cgtatgagtctaagcgagca-ctcggggatggtgtggctgcttggctgcctgtaaggccccagctctttccatcttgttggtcagccacctgcctcacggtgcgaggggactgccccacgtccagccgtcgcctctgcattcccaccagca----------------aggcact--tc-ttttttttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaaatggagcctgtatgct-ggtgcccgtgtgccgggctacaagccagggcttcagttactagaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCTGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGAAG----------------GAGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGATGAAGGATAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGAGTGGGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGCCTCCCCTCGTACCCT-------------------------AGTCTCCTGAGAGGGTTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCCCTGTGGTCGGAGCCAATGGCATTGGGAGTTGACATCCGAAGGTTGACACAGGA-CAGGCACGTGGAGATTTGGGGGAGAGAGATGTCTTAAGTATGGAGAGTCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGT---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGT-GGAAGAGGTGGGATC--------ACTCTGAG-CCTTTGGGTCTTATGAGAAAGCCAAGGAAGGGTTTTGG---------AAAAGA--GGGGCGGATACACGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAAAGGATTAGGATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45369338 1679 + 49145316 ggagtggaatacaatgg-ggtat---------gatgagagggaggggtgggaagtgta--gaagctag-accgCAGAGTTGCTGAGtcagcagacaggaactggacagctccctgtatgccaggtgctcttctgggtactc---gggtgtgggtgtagaccatgcaggcacagcactggtccctgcagaacttccggtgttggggacaccatgactatcagtctgggaagcttggtcatgagtgtcatgagccttagggctgtgggaag-ccataggaggttcaa-------------ttccagggt-aga-ggggtcaagtctagactggtctggag-----------ggagagagatgggag----GCAGGGACACAAGATCAGG-GAC-TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGTCCCCCGGTTTACTCTTCAGCCCCCCCCTTCCTGACCCCCTCGAAACCTTGTCCTCCATCTCCCCCAGCTTTGGGACCCAGGATAGGGTAGGGATTTAGATCCTCA--CACT----CCGCTCTGTGTCCTCACAGTGATGGGGCCAGTGGAGGCAGCCCCTGAATACCGCGTCATTGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGGAG--GCGGACGCAGCTCCGTGTGACA-CCCTCATGCCCA-TCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTGAGCC------CAT-----GCTCAAATCCAGGTCCACCTGCTGtaac--agtggtttgaagaagaaggaagtttgttctcctctta--------------------------------------------tgtgtgagtctgagcgagca-cttgggggtggtgt--------------------ggccccagctctttccatcttgttgttcagccac-tggttcacggtgcaaggtggctgtcccacctccagccatcacctctgcatttccaccagca----------------agGCGCT--TC-TTATTCTTAAGAACG-------------------TG------------------TCACCACAGCTCAGCTCACATCTTACAGAG-----CAGAACAAATTCCCGTGGTCATAC-------------------------------------------------------------------------------GTAAAGGAAGAAG--GGGAAATGGGTGTTAGGG-CAACCAGCAGACTCTACCTCCTGTCTTACCCAAGA-CCGCC-----TGTCCTGTCCACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCCAAGAAG----------------GCGGGGTGCTTGGGAAGAACTGTGGCTTCTTGCCCGACTTCTG-------CCGGTGTGAAGGGGCAGGTGGGGCTCA---------------------CTCTTGAACCTGCTCCCAGAGGCCTCGG-------------------GGTCTGGAGATGATGGA-AGGAGTGGACGGTGGCTTAGCGGC-CTGCTCTGCCCAGCGTGGGAGGGACAGAAGCTGGACGGGACTT----------CCTCAGGGCTCCCCTCCTGCCCC-------------------------GGTCTCCCAAGAGGGCTTCCCCTCTG-----GCCTGA----------------------------CCCGTGCTGCTCCCACTGTGGTTAgagccggcggcatt-ggagttgagatccaaaggttgacatggga-cgggcacgcggagatttgggggagagagacgtt-taagtgcagagagCCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------TGGGAGGGAGTGAGGTGGGGAAG--AGGGAAGT-GGAAGAGGTCGGATT--------GCGTTGGG-CCTCTGGGTCTTATGAGAGATCCAAGGAAGGGTTTAGG---------GAAAGA--GGGGCAGGTGCACGTGA-GGCAGGGA----GAGGAGGAGGTCCCCACACATGTCCAGGGAAAGATTAGGATG i calJac3.chr22 C 0 I 1201 s mm10.chr7 3632211 1622 + 145441459 GGAGTGAAATAGCCTTG-AGTGCCCGGTGGCGGCTGGGAGGATGGAGCAGAAAAGCAG-AAAGGATAATGCTGTAGAGCCAACGAGTCACCGGATCTCACTGAAGGGACTC---------------CTGTGCTGTGTGCACCAAGGTTGCAGGTGTGGGGAACGTGGAC---------------------CTCCATCTGTATGGGAGACCTTGAGTGCCAGTCTGAGGATCTTG---------CTCGCTAGCCTCAAGGCTTTGGGAAG-CTATAGGAAGGTTTA------------ATTTTGGAGCAAGATGAGGTCAAGACCAGATTGACCCAGAGGATAGACTGCAGGAGAAAGATGAGAA----GCAGGAGTAAGGCTCCTGGAGAGGAATATAAGCCTCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTCTTCAGCCCTT-ATGTAGC---CCCCTCAG-CCCCTCCTTTCTGA-TTCCATCCAGCCTCCACCTCAGT---CCCCAGCTTCGTTCCT------------------------CCCC--CATCCATAT--CCCTTCTTCTTTGTAGTGATGGGACCAGTGGAGGCAGCTCCTGAGTACCGAGTCATTGTGGATGCCAACAACCTGACTGTGGAGATAGAAAATGAGCTGAGTGAGTGAT-GGGAAGGGCTATGGAGACACCAGTATCCTGTGCTCTTCACTCTTT--CGTTA------------------------------------TGACCCAAAGGGAAGAACAGGCATGAACCTGGACCTCTTTTGTTTGCCTTTCTTGGGCA------AAAATATTGCCCTGATT-AGGTTCATCTTCTATAACAGAGTAACTAACATA------AATTGTACTCTCCTCCAT--------------------------------------------CATAAAAGTCTGAATAAGCAGGGCAGGTCTCGAGTCATCCTTTGACCCCCT-TGAGCAGCCAGGCTTTGCCACCTCGT---------ACGTGCTCCAGGATG--------ATGCC--------------CACCTCTGCATCCCTACCAGCAAATGTGGAGGGAAGATAGGCCATAGTT-GTTTCCTTAAGGCCACGATCTGGAAGTTGAAAATTG------------------TCACTT----TCAGTTCATATTTTGTAGACTTTTGTAGAACAAACTCCCAC--CTGCACATAGCATTGGAGACAGCTAGGAAATTAGAATGATTTGGG-GTTG-------------------------------GTTACTAGA----GAGG--TGGAAGTAGGTATTGGGGATAG-CAGCAGAGTCTGCCTCCC-CCTCAGTAGACACCTGTCCTTGATGTCCCATT-----TAGACATTATCCACAAGTTCATCCGGGATAAATACTCAAAGAGATTCCCTGAGCTAGAATCCTTGGTGCCCAATGCTCTGGATTACATCCGCACAGTCAAGGTGAGTGGAGAGAAG----------------TCTGG--------------------------------CTT--------------------GGGAAGAACTGGGGCCA---------------------CT---AGACCAT------GAAACCTCA--------------------AGTCTAGAAATAATGGAGAGTCATGAATGG-GGCTCAGTGGT-------------------GAGGGACAGATACTGGAATGGATGTGTCATGCACATCTCTTGCTTCCTTCCTCCCCTT-------------------------GGTTTCATGGGAGGA--TAACCACTG-----ACCTGG----------------------------CCCTTAC--CTCTGGCTGCAGTTGGAGCAGGTGTCCTT-TGAGCTGGCA----GAGGCCACCGCTGAA-----------------------------------TAAGAGCTAAGACCCTGC---------------------------------GT-GGGAAC-------------------------------------------------AAGC---------------AAGGATGAAGTCAGAAGGGGCAGGGAGGGAAGCTTGGAGAGGTCAGAAA--------GGGCAGAGAACATTAGATGT---------------GGAAGGTGTTGGCTTCTCTACAAGGGATTGGAGCGAGTGGAAGTGA-------AA----GAGCAGGGG--TCCTGCCTCTGTCCAGGA---GATCAGGATG i mm10.chr7 I 1141 C 0 s canFam3.chr1 19591870 1835 - 122678785 ggtgtgtgataagatggtggtgt---------cttgaaaaagtggggcttggacggtgcaaaggccag-actgtggagTTGGAGAGtcagcaggtacctacagagcagtgccc-gtgcgccaggcactattgtgggcatct---gggcactgg------------gggtgcagAACTTGTCTTCATAGTGTTTC------------------------CCGTCTGGGGAGCTTG---------CACCTCGGCCTCAGTGGTGTGGGGATCCCCTAAGGGGTT--------------AGTTCCGGGGCGACACGCCGTGGTGTCTAGACTGGCCTGGAG-----------AGAGAGAAATGGGAGGTGTGCCAGCGTGGAAACCCTGG-AAAACCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAC---------C-TCCAGGTTTTCTTATTAG------CCTCCCAGC-TCCCTTCCAACTACACCTCCTGACTCCCCTGGCTGTGGGAGCC-----------------TAGACACTCACCCACCAAGGCTGCTTCTCATCTTCACAGTGATGGGACCTGTTGAGGCGGCCCCTGAATACCGAGTCATCGTGGATGCTAACAACCTGACCGTGGAGATCGAGAATGAGCTGAGTGAGTGGC--AGGAAGG--GCAGAGATGGCCCTGCCTGCTGTCCCTTCCACTCT-CCTCCCATCCACAAGGAGAGGACAGGCAGGACCCTGGTTACTTTCCCCA---------------------CTGGCCTTCCCCAAGATCCTGCCCCAGACTCCTCATACTA-----GCTGTAGTCCAGATTCAGCTGCCataac--agcagcttaaa-aaaaagaaagtgtgcttttctccga--------------------------------------------tgtgagaatctggatgaggagtccagccctggagt------------------------caggctctttctgtc---ttgacctgccacctgtgtcagggcacaaagtgactgtc-cacctccagtcatcacctccacatccccaccagcagaacagggaagaaaa-agagggc--ac-agttctttaaggggg-------------------tgacctggaaattgcatgcatcactt-----catatgatatcctgtagac-----cagaactaacttgcagggccacacctggcagcaggggagt-----------agcgtttttgctgggtacccacgaacccagcta-aattcaggggttcatttatttaa-aaagaagcagggagatgggtgttgcggacagccagtggagtctgccTGCCCCCTTATCAG----CTACC-----TGTTCTCCCTACCTTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGCGCTTCCCTGAACTGGAGTCTCTGGTCCCTAATGCACTGGATTACATCCGCACGGTCAAGGTGAGTGGACAGAGGTGGGGACTCAGGAACAGTGGAGTT-----------------------------CTCTTGACTACCCCTCATGTGAAGGGG--AGCAGGGAGCAGGTGAATGACCTGGAATGTGGTTAGTGAGGCTGCTCC---AGGCCTCAGCTGCCTTTCTCGTTATTGAGGCCTGCAGATACTGGCAGGGGCCGAGTGGTGGCTCAGCTGCTCCAGGCTCCCCAGCAAGAAAGGGATGAAGCCTGGAAAGGATGT----------TCTCATGGCTCCTCTGCCACCCATCCAATCCTGCTGCTTCCTTGGATGGGTCTCCCAGGAAGGGCTGGGAGCTGCTTGAGGCTGAGGGAGTAAGGAGGGAGATGAGGGGGTCTCTCATGC--CACCAACAGTGGTtggagcaggtggcatt--gagtcgatatctaaaggttgatgcaggggcagccatgcagagatatgggggggaaagcCT---GGAGTACCAAGAACGGGA---------------------------------GATAATGAC-------------------------------------------------AAGCTGTGGTATGTTCAGAAGGGAGGAAGTGAG-----------GGCAAAGT-CAATGAGGTTGCATCCCCTGTGACCCCCAAG-GCTTTGGGCCTTCTGGAAAAGCC------------------------ATGAGA--GGGCCAGATACTAGTGAGAGTGGGGACACCGGTGAGGAGATTCCTGTGTGCTGTCAGGAGGAGGTGAGGATG i canFam3.chr1 C 0 C 0 a score=34799.000000 s hg38.chr19_GL949748v2_alt 97608 9 + 1064304 GCGGTGGGG s panTro4.chr19 59031117 9 + 63644993 GCGGTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909220 9 + 60714840 GCGGTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672420 9 - 106955855 GCGGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59956595 9 + 64156825 GTGGTGGGG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 54960442 9 + 59248254 GTGGTGGGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47090310 9 + 51301725 GTGGTGGGG i papAnu2.chr19 C 0 I 309 s chlSab2.chr6 46798097 9 + 50890351 GTGGTGGGG i chlSab2.chr6 C 0 I 78 s calJac3.chr22 45372218 9 + 49145316 GTGGTGGGG i calJac3.chr22 I 1201 I 1 s mm10.chr7 3633833 9 + 145441459 GTGGCACAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19593705 9 - 122678785 GTGCAGGGG i canFam3.chr1 C 0 C 0 a score=294018.000000 s hg38.chr19_GL949748v2_alt 97617 142 + 1064304 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCA-CTCCGACTTGACGCAGGCCAGAGGCTTGTGAGGCCACA-GTCTTTC-CAGACGCCACTCTGCCCGGGCTCCGTTTCCAGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT s panTro4.chr19 59031126 142 + 63644993 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCA-CTCCGACTTGATGCGGGCCAGGGGCTTGTGAGGCCATG-GTCTTTC-CAGACGCCACTCTGCCCGGGCTCCATTTCCAGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909229 143 + 60714840 AAGCCCCTGCAGGGA--AGCGAGGCTG-AGGATTCACGCCTCCGACTTGATGCGGGCCAGAGGCTTGTGAGGCCGCG-GTCTTTC-CAGATGCCGCTCTGCCCAGGCTCCGTTTCAGGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672429 142 - 106955855 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCC-CTCCGACTTGACGCGGGCCAGAGGCTTGTGAGGCCGCG-GTCTTTC-CAGACGCCGCTCTGCCCGGGCTCCGTATCCGGGTCATTGAAAGCAGGGCAGACAGTGTGGAT i nomLeu3.chr10 C 0 I 297 s rheMac3.chr19 59956605 121 + 64156825 AAGCCCCCGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTCGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i rheMac3.chr19 I 1 C 0 s macFas5.chr19 54960452 121 + 59248254 AAGCCCCCGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47090628 121 + 51301725 AAGACCCTGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCA-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGCTTCC---------AAAGCAGAGCAG----------- i papAnu2.chr19 I 309 C 0 s chlSab2.chr6 46798184 121 + 50890351 AAACCCCTGCAGGGA--AGCGAGTCTG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGATGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i chlSab2.chr6 I 78 C 0 s calJac3.chr22 45372228 132 + 49145316 AAGCCCCTGCAGGGA--AGTGAGGCCACCGGATCAGTG-CTCCCACTTGTCATGGGCCAGAGGCTTGTGAGGCCTCG-GTC-TCC-CAGATGCCACTGTGCCCAGGCTCCATTTCCAGGTCAGCCAAAGCAGAGCAGA---------- i calJac3.chr22 I 1 C 0 s mm10.chr7 3633842 120 + 145441459 -------------GA--ATTGTGTCTG-TGGAATAAAG-TGCGCTTTTGAC---GGCC-----TCTTTAGTGCAGCATGTCTTCCTTGGAGGCTGCTTTG-CCAGCTTGTACTTCTGCATCCGT-AGAGCAGAGCAGGCACACTGAT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19593714 109 - 122678785 GCATCCATGCAGGAAGCAGTGTGGTCA-AAG--TTGCA-TTTTGAGTTGCTGCAGA-CAGTGG---------------GTCTGCC-T-----------------GGTTCTGGTTCTAGACCAGC-AGTGCAGGAGCAACGGTACCGAT i canFam3.chr1 C 0 C 0 a score=1096583.000000 s hg38.chr19_GL949748v2_alt 97759 325 + 1064304 GCTTGACGTGGTGGAGGCAGGAATGGTGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCTAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCGAGCCTCCCCTATCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------TCGAGGGAGGC-----GCCGGGCC----C-T s panTro4.chr19 59031268 325 + 63644993 GCTTGAGGCGGTGGAGGCAGGAATGGTGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCCAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCGAGCCTCCCCTATCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GCGAGGGAGGC-----GCCGGGCC----C-T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909372 329 + 60714840 GCTTGAGGCGGTGGAGGCAGGAACGGTGTGGATGCTTGAGGTGGTGGAGGCAGGAG-AGGTCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCGCCAAGAAGAGACCCGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCAAGCCTCCCCTGTCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GTGAGGGAGGC-----GCCGGGCCCGGGC-T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672868 328 - 106955855 GCGTGAGGCGGTGGAGGCAGGAACCGTGTGGACGCTTGGGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCCAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCCAGCCTCCCT--GAGTCCCCGAGCCTCCCC-GTCTTCTCTGCTCACCCCTAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCACT--------------------------------------GCGAGGGAGGT-----GCCGGGCCCGGGC-T i nomLeu3.chr10 I 297 C 0 s rheMac3.chr19 59956726 304 + 64156825 ----------------------ACGATGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCCGAGTAGGTGCAG-GGCCAGAGAGGCTC-TGAAGCCTTCCT--GAGTTCCTGAGCCTCCC--GTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCCGGGCCCGGGC-C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960573 306 + 59248254 ----------------------ACGGTGCGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCCGAGTAGGTGCAG-AGCCAGAGAGGCTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCTGGGCCCGGGC-C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47090749 307 + 51301725 ----------------------ACGGTGTGGATGCTTCAGGcggtggaggcaggag-aggccCCCAGTGTGGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCTGAGTAGGTGCAG-AGCCAGAGAGGTTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GGGAGGGAGGC-----GCCGGGCCCAGGC-C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798305 306 + 50890351 ----------------------ACAGTGTGGTTGCTTCAGGCAGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCAAGAAGAGACCCGAGTAGGTGCAG-AGCCAGAGAGGTTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCCGGGCCCGGGC-C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372360 314 + 49145316 -----------------------GAGTGTGGATGCTTCGGGTGGCAGAGGCAGGAG-AGGCCCCCAGTGCAGAGACCCTCAGTGTAGACACCCTGACTTTCCCAGTGTCCCCAAGACAAGACCTGAATAGGTGCTG-AGCA--AGAGGTTC-TCCAGCCCTCCT--GAG--CCCAAGCCTCCCT-GTC-TCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGTGTCACTGCCTCCACCACTCAGGGGTATGTCCGCT--------------------------------------GCGAGGGAGG------ACTGGGCCCGGGC-T i calJac3.chr22 C 0 C 0 s mm10.chr7 3633962 348 + 145441459 ---------GCTTTAGGCAGGGAGGTTGTAAA-------AGTGTAAAAGGAAAGAG-AGGCCTCCAGTGTATGG---------------ACCTTAGCTTTCCCAGCTTCCTCAAGGGGAGACCTCTGTTGGTGTTGTAGCAAAAGAGGGTCTTTTGGGCTTACTACAAATTCTC---CCTCCCCTTCCTAC----------CCCAGGAGCTGGGCAACAGCCTGGATAAGTGCAAGAACAATGAGAACCTCCAGCAGATCCTGACCAATGCTACTATCATGGTTGTTAGTGTCACTGCCTCTACTACCCAGGGGTATGTATGCCAAACGGTAATGTGCCGCAAGCCTACCATAGGACAATTAACAGGAGAGACAGAATGGAGGGCATGGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19593823 289 - 122678785 ------------------------GTTCTGAGTGGTGAAGTCCTGGGAGCTGGGAGCAGGCAGCCTTCATCCAG---------------ACCCCAGATGTCCCC---------AGAAGAGACTTAACTAGGTGCAGGGGCAAGAGAGCTCC-TCAGGCCTTCCT--GAATCCCTGTGCCTCCCC-CTCTTGCCTTCTCACCTCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAATAACGAAAACCTACAGCAGATCCTAACCAACGCCACCATCATGGTCGTCAGCGTGACTGCCTCCACCACCCAGGGGTGCGTGCATA------------------------------------------GGGTGGG-----ACCATGCACT----- i canFam3.chr1 C 0 I 1393 a score=114000.000000 s hg38.chr19_GL949748v2_alt 98084 43 + 1064304 AATGG----GATTGGGGATTA-GGCTGGAGCTACACACGCAGGTGTac s panTro4.chr19 59031593 43 + 63644993 AATGG----GACTGGGGATTA-GGCTGGAGCTacacacacaggtgtac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909701 43 + 60714840 AATGG----GACTGGGGATTA-GGCTGGAGCTACATATGCAGGTGTGc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673196 43 - 106955855 AATGG----GACTGGGAATTA-GGCTGGAGCTACACACGCAGGTGTGc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957030 43 + 64156825 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960879 43 + 59248254 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091056 43 + 51301725 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTgggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798611 43 + 50890351 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372674 40 + 49145316 AGGGG----GACTGCGGATTA---TTGAAG-TACACATGCAGATGTGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3634310 41 + 145441459 AGTGGTGCTGACTGAGAATTATGGCC-------CCTAGACAGATGGAA i mm10.chr7 C 0 C 0 e canFam3.chr1 19594112 1393 - 122678785 I a score=91431.000000 s hg38.chr19_GL949748v2_alt 98127 67 + 1064304 acac----gcacacaca------------------------------------catacaca------catgcaca----caca----------cacacaGAACCGAGAGGGC---TGGGGCT---GGGCACAC s panTro4.chr19 59031636 61 + 63644993 acac----gcacacaca------------------------------------catacaca------catgcaca----caca----------------GAACTGAGAGGGT---TGGGGCT---GGGCACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909744 77 + 60714840 acat----gcacgcaca------------------------------------cacacacg------cacacaca----cacacacacacacacacacaGAACTGAGAGGGT---TGGGGCT---GGGCACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673239 57 - 106955855 acac----gcacacaca------------------------------------catacaca----------cgca----caca----------------GAACTGAGAGGGT---GGGGGCT---GGGCACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957073 69 + 64156825 atac----acacacacg------------------------------------cacacaca------cacacacatgcgcaca----------cacacaGAACTGAGAGGGT---GGGTGCT---GGGCAC-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960922 75 + 59248254 ATac----acacacacgcgca------------------------------cacacacaca------cacacacacgcgcaca----------cacacaGAACTGAGAGGGT---GGGTGCT---GGGCAC-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091099 49 + 51301725 atat----gcacacaca--------------------------------------------------------------caca----------cacacagaactgagagggt---gggggct---gggcac-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798654 65 + 50890351 ATAT----Gcacacaca------------------------------------cacacgca------cacacaca----taca----------cacacaGAACTGAGAGGGT---GGGGACT---GGGCAC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372714 108 + 49145316 ACAC----ACACACACACATATGAGAGGGCGGGACTGGGGATTACTGAAGCTacacacgcagatgtgcacacaca----caca----------cacacataACTGAGAGGGC----GGGACT---GGGGATAC i calJac3.chr22 C 0 I 1444 s mm10.chr7 3634351 72 + 145441459 TTTTTATGATAGTCCCA------------------------------------GAACTAAA------CAAACACA----CATA----------CATACACAGCTGAGACAGTAGATGGGGCT---GACCAC-- i mm10.chr7 C 0 I 41 s canFam3.chr1 19595505 58 - 122678785 ACGT----GCACATATG------------------------------------TGTACAGA------CGTGCACA----CACC------------------GCTAGGAGGAC---ACGGGCTCTCATGC---- i canFam3.chr1 I 1393 C 0 a score=456944.000000 s hg38.chr19_GL949748v2_alt 98194 149 + 1064304 CAGGCAGGCG-----------------------------------------------------------------------GGAGATC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgcgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTATGTGGAGTCC s panTro4.chr19 59031697 149 + 63644993 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCATCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909821 115 + 60714840 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAAGCCTGCGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673296 149 - 106955855 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCTGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGCGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957142 149 + 64156825 CAAGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960997 149 + 59248254 CAAGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgtgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091148 149 + 51301725 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798719 149 + 50890351 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCTGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgtgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3634464 331 + 145441459 tgggtaggagcaccgactgctcttctaaaggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatctgtaaggagatctgatgccctcttctggagtgtctgaagacagctacagtgtatttacatataataaataaatacatcttttaaaaaaaagaaaGAAATGTACCTAGCAAAGCTGGAGTCT-GCCCACAACCCTCACGTGCTCCACAATGTAGGCAGCAGCTGTCGGATGAGGAGCTAGAGCGGCTAGAGGAGGCCTGTGACATGGCACTGGAGCTGAATGCCTCCAAACACCGCATCTATGAGTATGTGGAGTCC i mm10.chr7 I 41 C 0 s canFam3.chr1 19595563 166 - 122678785 TGGTCAAGTG-----------------------------------------------------------------------GGATCCC------------CAGGAGGG-------------------------------------------------------------------------------GCAGGGGTCCAACCCAGTCACATCATTAACCAC----TGCAGGCAACAGCTGTCAGAGGAGGAGCTAGAGCGGCTGGAGGAGGCCTGTGACATGGCACTAGAGTTGAACGCCTCTAAGCACCGCATCTACGAATATGTGGAGTCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45372822 1444 + 49145316 I a score=748965.000000 s hg38.chr19_GL949748v2_alt 98343 209 + 1064304 CGGATGTCCTTCATCGCACCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGTCCCC-GGGCTGGGTCCCATGGAG---CG--------GGGG--TCTGCTGACACTGTGACCTTGGGAAAGCTACAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGACCTCAGCACCCCGTCTC-CCTGGACATCACAGAGGTCAGCCA s panTro4.chr19 59031846 209 + 63644993 CGGATGTCCTTCATCGCACCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGTCCCC-GGGCTGGGTCCCATGGAG---CG--------GGGG--TCTGCTGACACTGTGACCTTGGGAAGGCTACAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGACCTCAGCACCCCGTCTG-CCTGGACATCACAGAGGTCAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909936 208 + 60714840 CGGATGTCCTTCATCGCGCCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCAAGGAG---CG--------GGGC--TCTGCTGACACTGTGACCTTGGGGAAGCTGCAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGG-CTCGGCACCCCGTCTC-CCTGGACGTCACAGAGGTCAGCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673445 207 - 106955855 CGGATGTCCTTCATCGCGCCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------GGG---TCTGCTGA-ACTGTGACCCCGGGGAAGCTGCAT-CCTTTTCCGTAGAATGGGGGCTT-TGGCACCTGGGCCTCTGCACCTTGTCTC-CCTGGACATCACAGAGGTCAGCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957291 210 + 64156825 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------GGAC--TCTGCTGACACTGTGATCTTGGGGAAGCTGCTTCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACGTGACAGAGGTCAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961146 210 + 59248254 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------AGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCTTCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACATGACAGAGGTCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091297 210 + 51301725 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATCATTGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCGTGGAG---CG--------AGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCTTCCCTTTTCTATAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCATCTC-CCTGGACATCACAGAGGTcagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798868 210 + 50890351 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCGTGGAG---TG--------GGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCATCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACATCACAGAGGTCAGCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374266 219 + 49145316 CGAATCTCCTTCATATCGCCCAACCTGTCCATCATCATCGGGGCATCCAGGGCTGCCAAGATCATGGGTGAGGCCCCGGGGCTGGGTCCCATGGCG---GGGATGGGGAGGCG--TCTGCTGACACTGTGGCCTTGGGAAAGCTGCATCCCTTTTCTTTGGAGGGGGGGCTT-TGGCACCTAGGCCTCAGCACCTGGTCTC-CCTGGACATCACAGAGGTCAGCCA i calJac3.chr22 I 1444 C 0 s mm10.chr7 3634795 174 + 145441459 CGGATGTCCTTCATTGCACCCAACTTGTCCATCATCATTGGAGCATCCACAGCTGCCAAGATCATGGGTGAGGTCCC--AGCGGGGTCCCTTTGGC---AG--------AG----TCTGCTGATA----------GGTTAGGTTGCCT----------TGGAAAGTGGGGTT-TGGCCTATTG-----------TGTTGTC-CCCTGAAGT--CAGAGGTCAGCCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19595729 213 - 122678785 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATCATTGGGGCATCCACAGCCGCTAAGATCATGGGTGAGGCCCT-G----GGGTGCGGTAGAGATATG--------GGGCCATCCTCGGACAGTGTGACCTTGAGGAAGCCACGTCCCTCCTCTACGGGACAGGACCCTACTCCCCCTCACCCTCATCCTGTCATCCCTCCTAGAGATCACAGAAGTCACCCA i canFam3.chr1 C 0 I 1193 a score=48845.000000 s hg38.chr19_GL949748v2_alt 98552 10 + 1064304 GCCTGGCACA s panTro4.chr19 59032055 10 + 63644993 GCCTGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910144 10 + 60714840 GCCTGGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673652 10 - 106955855 GCCTGGCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957501 10 + 64156825 GCCTGGCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961356 10 + 59248254 GCCTGGCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091507 10 + 51301725 gcctggccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799078 10 + 50890351 GCCTGGCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374485 10 + 49145316 GCCTGGCACA i calJac3.chr22 C 0 C 0 s mm10.chr7 3634969 10 + 145441459 GTTTGGCACA i mm10.chr7 C 0 I 1203 s canFam3.chr1 19597135 10 - 122678785 GCCTGGCACA i canFam3.chr1 I 1193 C 0 a score=1206783.000000 s hg38.chr19_GL949748v2_alt 98562 410 + 1064304 CAGCAAAGCCTCGTCTGTGGGAAaaacactcacccacagctccttct-ccctcccctgtgc---------------cggaaacccagagatga-ccacacccaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGCCATCCCTGGAACGGCGTTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGG-GGCCTCCTCCCTG--CACCCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTTGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCATCGAGGAATCCAACCAGAACTTCATGTAAAGGTGCCCAGCACACGTCGAGCCCCCAGGCAGATTTACTCACCCCCACCT-CTCTGCTTTCTTCTGAccgcccc----cccttcct s panTro4.chr19 59032065 403 + 63644993 CAGTAAAGCCTCGTCTGTGGGAAAAACACTCCCCCACagctccttct-ccctcccctgtgc---------------cggaaacccagagatga-ccacacctaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAACGGCGTTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGG-GGCCTCCTCCCTG--CACCCCCAGGCC-------CTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCACGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCATCGAGGAATCCAACCAGAACTTCATGTAAAGGTGCCCGGCACACGTCGAGCCCCCAGGCAGATTCACGCACccccacct-ccctgctttcttctgaccgcccc----cccttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910154 413 + 60714840 CAGCCAAGCCTTGTCTGTGGG-AAAGCACTCACCCACAGCCCCTTCT-CCCTCCCCTGTGC---------------TGGAAACCCAGAGAGGA-CCACACCCGGGCCCTGTTGTCAGAGAGCGCCTGGTTTGATGAAAATGGTTCCAAAACACAGACATCCCTGGAACAGGGGTAGTGTGGCT----TAGCACAAATGTGGTGATCAGCTTCCTGTTGAG-GGCCTCCTCCCTG--CACCCCCAGGGCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGTGGAATGGGCCAGGTCG---CCCACCTGGCAGGG-CCACCGAGGAATCCAACCAGAACCTCATGTAAAGGTGCCTGGCACACGTCGAGCCCCCAGGCAGATTCACGCACccccacct-ccctgctttcttctgaccgcccctgctcccttcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673662 414 - 106955855 CAGCGAAGCCTTGTCTGTGGGAAAAACACTCACCCACAGCTCCTCCT-CCCTCCCCTGTGC---------------CGGAAACCCAGAGATGA-CCACACGCAGGCGCTGTTGTCAGGGAGCTCCTGGTTTGGTGAAAATGGTTCCAAAACACAGACATCCCTGGAACGCCATTCGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGA-GGCCTCCTCCCTG--CACCCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGCGAAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCCCAGCACACGTCGAGCCCCCAGGCAGATTCACGCACCCCCACCT-CCCTGCTTGCTTCTGAccgcccccgctcccttcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957511 401 + 64156825 CAGCAAAGCCTTGTC--TGGGAGaaacactcacccacagctcctcct-ccctcccctgtgc---------------cggaaagccagagatga-ccacacccaggccctgttgtcagggggctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGGACAAACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCTG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCGTCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCGCCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961366 401 + 59248254 CAGCAAAGCCTCGTC--TGGGAGaaacactcacccccagctcctcct-ccctcccctgtgc---------------cggaaagccagagatga-ccacacccaggccctgttgtcagggggctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCTG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCGCCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091517 401 + 51301725 cagcaaAGCCTCGTC--TGGGAGAAACACTCACCCACAGCTCGTCCT-CCCTCCCCTGTGC---------------CGGAAACCCGGAGATGA-CCACACCCAGGCCCTGTTGTCAGGGAGCTCCTGGTTTGGTGAAAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGTTGCCTGTTGGG-Ggcctcctccctg--ca-ccccagGCCAGCTGccctccctctctgagcctcctttGCGTCTGCCCCTCGCGGAATGGGCCAGGTCA---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCTAGAACCTCATGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCACCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799088 401 + 50890351 CAGCAAAGCCTCGTC--TGGGAGaaacactcacccacagctcctcct-ccctcccctgtgc---------------cagaaacccagagatga-ccacacccaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACACACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCCG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTCTGCGTCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACGTGTCGAGCCCCCAGGCAGATTTGCGCACCCCCACCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374495 394 + 49145316 TAGCAAAGCCCTGTCCGTGGGAAAAACACTCACCTACAGCTCCTCCT-GCAG-CCCTCTGC---------------CAGAAACCCAGAGCTGA-CCACACCCAGGCC--GTTGTCAGGGAGCTTCTGGTTTGGTGAATATGGTT------CACAGACATCTCTGGAATGG-GGCAGTGTGGCCTATGTAGCACAAATGAGGTGGTTGGCTTCCTGTCTAG-TGCCTCCTCCCTG--CA-CCCCAGACCAGCTGCCCTCCCTTTCCCAGCCTCCTTTGCATCTGTCCCTCGTGGAATGAGCCAGGTCC---CCCTCCTGACAGGG-CCACTGAGGGGTCCAACCAGAGCTTCATGTAAAGGCGCCCGGCACACGGTGATCCCCCC-GCAGATTCGCGCACGCCCACCT-CTCCGCTTTCTTCTGACTGCTCC------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19597145 393 - 122678785 -AGCAGACCCCTGTCAGAGGTAGGCATTTTTACCTACAGCTCTTCCTCCCCTCCCCTGGGCCTGCAGATGCGCTCACGGGAACCCAGAGATGATTCACAT-TAGGCCCTGTCATCAGGGTGTCCCcagtatggtggtaactgttataaaaca------------gagcaggggctgtgtagct----ctg--cagacttgggggcaagtt-cctgttgggctgctgcctcactttccatcctcaggcaggtgatttcacctctctgagcctcctctgaatc--ctccttctgaaaggggacttatcaggccctcccaggcagagcccacccagaaattcaaccagaaactcacctaaaggcacaaagcattcggtgagcccccaaacaaatgT---------------CCTGTGTTCCTTCTGACCTGTTT------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3634979 1203 + 145441459 I a score=1118082.000000 s hg38.chr19_GL949748v2_alt 98972 295 + 1064304 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCACCGGTGAGC----------------C---CACTGCGTCATGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA--CCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGA-- s panTro4.chr19 59032468 295 + 63644993 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACGAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCACCGGTAAGC----------------C---CACCGCGTCACGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA--CCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910567 296 + 60714840 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCAGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA-CCCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGA-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674076 294 - 106955855 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTATATCTACCACAGTGACATCGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACGGCCCCTCCGCTG--CCCCCCGGAGCCTTCCGCTA---------------TGCCCAGA---CAGCCTGAGC---AGCCA-CCCCACCATCTG--GCCCAGCTGACAGTAGCACTCAGGAGCTGGGA-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957912 296 + 64156825 GTCCTCCTCCCACCGCAGGCGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACAGCCCCTCCCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgacagtagcactcaggagccgggg-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961767 296 + 59248254 GTCCTCCTCCCACCGCAGGCGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACAGCCCCTCCCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgacagtagcactcaggagccggga-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091918 296 + 51301725 GTCCTCCTCCCACCGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTTGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACTGCGTCACGGCCCCTCCCCCGGCTCCCCTGGAGCCTTATGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCTG--GCCCAGCTGACAGTAGCACTCAGGAGCCGGGA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799489 311 + 50890351 GTCCTCCTCCCACCGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCGCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGCCGCTGCGCCACGTGAGC---CACTGCGCCACGGCCCCT-CCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgatggtagcactcaggagccggga-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374889 286 + 49145316 CTCTTCCCTCCCCTGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACACTGTCGGGCTTCTCATCCACCTCAGTGCTGCCCCATACCGGCTACATCTACCACAGCGACATCGTGCAGTCCCTACCCCCGGTGAGC----------------C---CACAGTGTCATTG-CCTGCCCCTGGCTCCCCTGGAACTTTCCACTG---------------TGCCCAGA---CAGCCT-AGA---AGCCACCCCTACCAT-----------CTGACAGTAGCACTCAGGGGATGGGA-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3636182 256 + 145441459 CCTCACCTCTTGTTGCAGGTGTGGCTGGAGGGCTCACCAACCTCTCTAAGATGCCTGCCTGCAACATCATGCTGCTGGGAGCCCAGCGCAAGACCCTGTCTGGCTTCTCTTCTACCTCAGTGTTGCCTCATACTGGTTATATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCAGTGAGT----------------CCTTCACCTTGTC----CCCTTCCCCCAGCCACC---AGGCCTT----------------------------------------------------------ATCTG--GCTTGGCTGGCAATATTCCTCAGGCTCCTGGA-- i mm10.chr7 I 1203 I 95 s canFam3.chr1 19597538 309 - 122678785 CCCTCCTTCCTGTTGCAGGGGTGGCTGGGGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTTGGGGCCCAGCGGAAGACGCTGTCCGGCTTCTCGTCCACGTCTGTGCTGCCCCACACTGGTTACATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCGGTGAGT---------------GC---CACTGGCATGTGGCTC-----------CCCGCAGAGCCTTTTGCTGGGCCAGAAGCAGCCTTGTCCAGAGGGCAGTGTGAGCCCAAGCAAGTTGCCCCCTCTGCTCCTCAGTTCCCATTGAC---TAGGAGCTcagagg i canFam3.chr1 C 0 C 0 a score=1085808.000000 s hg38.chr19_GL949748v2_alt 99267 441 + 1064304 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcaggtgactg-----------------tgggcaagaggcatgagcgccctgtgcctcagtctcctcccctatcaaatgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcacatgaagcacttacagttcaggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAACT------gctccgaagaccaccctcaggtttgaccattcactagaaagactcacagaatccactgagggctgc------------------------------------acatcag----ccatgg--------ggagagacacacaggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcgggacacatcaccatcccagcatcgacgcctgacagcacacaCACAGGCC-----CGCTAGCCTggcg s panTro4.chr19 59032763 441 + 63644993 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcgtgagcgccctgtgcctcagtctcctcccctatcaaatgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttacaggtcaggcctagctcacaacaagcAGCGTCGGGTTAGCGTGCAGCT------gctccgaagaccaccctcaggtttgaccattcactagaaagactcacagaatccactgagggctgc------------------------------------acatcag----ccatgg--------ggagagacacactggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcgggacacatcaccctcccagcatcgacgcctgacagcacacaCACAGGCC-----CGCTAGCCTggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910863 441 + 60714840 acagggtggcatgggacgtgagagccagggctctgcagcacaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcgtgaacgctctgtgcctcagtctcctctcctatcaaatggcag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttacaggccaggcctagctcacgacaagcAGCATCGGGTTAGTGTGCAACT------GCTccgaagaccaccctcaagtttgaccattcactagaaagactcacagaatccaCTGAGGGCTGC------------------------------------ACATCAG----CCATGG--------GGAGAGACACACAGGAGGGGCAGGAGAGGTCACCAACCTCGGAGCTTCCGGG-GTCCTCTCCCTGCAGTCGGGACACATCACCGTCCCAGCATCGACGCCTGACAGCACACACACAGGAC-----CGCCAGCCTGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674370 453 - 106955855 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcatgagcgccctgtgcctcagtctcctcccctatcaagtgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttataggtccggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAGCT------GCTccaaagaccaccctcaggtttgaccattcactagaaagactcactgaatccactgagggctgc------------------------------------tgtgctggggactatagtttataacagatagagacacaggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcaggacacatcaccgtcccagcatcggtaactgacagcacacacacaggac-----cgccagccTggcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59958208 426 + 64156825 gcagggtagcatgggatgtgagagccagggttctgcagca------------------------------------cacctgtcgggtgactg-----------------tgggcaagaggcgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgcctgcttcac-gagtttgggcgagggctccatgcagacgaggccctcacaaggcaggcctagctcacgacaagcAGCGTCGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGA--CACGGAA-CCCCTGAGGGCTGC-TGTGCTGGGGACTG---------TATAacagattaacattag----ccacag--------ggagagacacacaggaggagcagaagaggtcaccaacctcggagggcgatgt-gtcctctccctgcagtcaggacacatcgccctcccggcatcgatgcctgacag----cacacagggC-----CGCCAGCCTggcg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54962063 435 + 59248254 acagggtagcatgggatgtgagagccagggttctgcatca------------------------------------cacctgtcgggtgactg-----------------tgggcaagaggtgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgcctgcttcac-gagtttgggcgagggctccatgcagacgaggccctcacaaggcaggcctagctcacgacaagcAGCGTCGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGa--cacggaa-cccctgagggctgc-tgtgctggggactatagtt----tataacaaactaacattag----ccacag--------ggagagacacacaggaggagcaggagaggtcaccaacctcggagggcgatgt-gtcctctccctgcagtcaggacacatcgccctcccggcatcgatgcctgacagcacacacacagggc-----cgccagccTggcg i macFas5.chr19 C 0 I 15700 s papAnu2.chr19 47092214 427 + 51301725 ACAGGGTAGCATGGGATGTGAGAGCCAGGGTTCTGCATCA------------------------------------CACCTGTCGGGTGACTG-----------------TGGGCAAGAGGCGTGAGCgccctgtgcctcagtctcctccccTCGCAAATGGGAG-CACAGCGCCCGCTTCAT-GAGTTGGGACGAGGGCTCAATGCAAATGAAGCCCTTACAAGGCAGGCCTAGCTTACGACAAGCAGCGCTGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGA-----------ACCTGAGGGCTGC-TGTGCTGGGGACTATAGTT----TATAACAAATTAACATTAG----CCACAG--------GGAGAGACACACAGGAGGAGCAGGAGAGGTCACCAACCTCGGAGGGCGATGT-GTCCTCTCCCTGCAGTCAGGATACATCGCCCTCCCAGCATCGATGCCTGACAGCACACACACAGGGC-----CGCCAGCctggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799800 436 + 50890351 acagggtggcatgggatgtgagagccagggttctgcatca------------------------------------cacctgtcgggtgaccg-----------------tgggcaagaggcgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgtgtgcttcat-gagttgggacgagggctcaatgcagacgaagccctcacaaggcaggcctagctcacgacaagcAGCGTTGGGTTA----GCAGCT------GCTCCGAAGGCCACT--------------GTCACTGGAAAGA--CACGGAAGCCCCTGAGGGCTGC-CGTGCTGGGGACTATAGTT----TATAACAAATCAACATTAG----CCACAG--------GGAAAGACACACAGGAGGAGCAGGAGAGGTCACCAACCTCGGAGGGCGATGT-GTCCTCTCCCTGCAGTCAGGACACATCGCCCTCCCGGCATCGATGCCTGACAGCACACACACAGGGC-----CGCCAGCCTggcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45375175 487 + 49145316 acagggtggcacggggcgtgagagccaggactctgcagtccaccagctctggtgcccaggctctggcagcgccacccaccaatca-gtgaccg-----------------tgggcaagaggcgtgagcgccctgtgcctcagtctc--cccccatcagacgggag-cacagcacctgcttcat-gagttaggacgagggctcaatgcagatgaagcccttccaagtcaggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAGCT------gctccaaagaccaccctcaggtctaaccgttcactagaaagactcatagaaccccctgaggactgc-tgtgctggggact-tagtt----tataacagtttaacatcag----ccatgg--------g----gacacacaggaggggcaggagaggtcagtgcccctggagcttcccag-gtcctct--cTGCCATCAGGGTACATCAGCCTCCCAGCTTTGATGCCTGGCAGCACATACACAGACCTAGAACACAAGCAGGAgg i calJac3.chr22 C 0 I 2 s canFam3.chr1 19597847 461 - 122678785 atagggtcacacggggcataggaacaaggaccccagagcaga------------------------------tgtacaggggtagggattctggagctctacttaacaactgggcaagaggcatgag----ctgtgcctcagtgt-------tgtaaaatgggggaaatagaacctgcttcctggggttgtgattaggactcc---tatatgaaacactt-----ccaggtcttgcacataacaagcgATGTC--ATTAGCTtgcaagttgtaggggtctccaagccatccttgggttcagtagcccactagaggggtgtacagactccaagttgacccacttgggctatggtttgtcgtcgtgaaaggacagact-atttcag----ccactg--------gaggaagcgtatgaggcaggagccagaagt-gccagcctcagcgctttcagtcatcctctcc-----atcaggacatgtcac--tcctggcctccacatgtgacagcgtgcagaaagaac-----cgcccccaggg-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=37311.000000 s hg38.chr19_GL949748v2_alt 99708 15 + 1064304 gggcgcagtggctcg s panTro4.chr19 59033204 15 + 63644993 gggcgcagtggctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911304 15 + 60714840 gggcgcagtggcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674823 15 - 106955855 gggcacggtggctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59958634 15 + 64156825 gggcgcggtggctca i rheMac3.chr19 C 0 I 1923 s macFas5.chr19 54978198 15 + 59248254 gggcgcggtggctct i macFas5.chr19 I 15700 C 0 s papAnu2.chr19 47092641 15 + 51301725 gggcacggtggctca i papAnu2.chr19 C 0 I 1561 s chlSab2.chr6 46800236 15 + 50890351 gggcaccgtggctca i chlSab2.chr6 C 0 I 1788 s calJac3.chr22 45375664 15 + 49145316 aggcacggaggctca i calJac3.chr22 I 2 C 0 s canFam3.chr1 19598308 11 - 122678785 aggcccagctg---- i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=85762.000000 s hg38.chr19_GL949748v2_alt 99723 29 + 1064304 tgcctgtcatcccagcactttgggaggcc s panTro4.chr19 59033219 29 + 63644993 cactggtcatcccagcactttgcgaggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911319 29 + 60714840 cgcctgtcatcccagcactttgggaggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674838 27 - 106955855 --cctgtcatcccagcactttgggaggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960572 29 + 64156825 cgcctgtcaccccagcactttgggaggcc i rheMac3.chr19 I 1923 C 0 s macFas5.chr19 54978213 29 + 59248254 cacctgtcaccccagcactttgggaggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094217 29 + 51301725 cgcctgtcaccccagcactttgggaggcc i papAnu2.chr19 I 1561 C 0 s chlSab2.chr6 46802039 29 + 50890351 tgcctgtcacgccagcactttgggaggcc i chlSab2.chr6 I 1788 C 0 s calJac3.chr22 45375679 29 + 49145316 tgcctgtaattccagcactttgggaggcc i calJac3.chr22 C 0 I 467 s canFam3.chr1 19598319 29 - 122678785 agccttgaagttcagtctttcctggggct i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=490022.000000 s hg38.chr19_GL949748v2_alt 99752 172 + 1064304 gaggcgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaa-ctagct-gggtatagtggcacacacttataatcccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggaggtggagg s panTro4.chr19 59033248 173 + 63644993 gaggcgggcagat-cacctg---aggtcaagtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaaactagct-gggtatagtggcacacacttataatcccagctacttgggagg--ctgaggcaggagaatcacttgaacccaggaggtggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911348 173 + 60714840 gaggtgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaaactagct-gggtatggtggcccacacttataatcccatctacttgggagg--ctgaggcaggagaatcacttgaacccaggaggtggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674865 173 - 106955855 gaggcgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctccactaaaaatacaaaaaaactagcc-gggtatgtttgcacacacttataatcccaggtacttgggagg--ctgaggcaggagaatcgcttgaacccaggaggtggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960601 173 + 64156825 aaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggagatggaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54978242 173 + 59248254 aaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggagatggaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094246 173 + 51301725 gaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctaaggcaggagaatcgcttaaacccaggagatggaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46802068 173 + 50890351 aaggcgggcagat-catctg---aggtcaggagttcgtgaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaacaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaattgcttgaacccaggagatggaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45376175 172 + 49145316 gaggcaggtggat-gactgg---agatcaggagtttgagaccagcctggccaacatggtgaaacctcatctctact-aaaatattacaaaattagtc-aggtgtggtggcacatacttgtaatcccagctgcttggaaag--ctgaggcaggagaattgcttgaacccaggaggtggagg i calJac3.chr22 I 467 C 0 s canFam3.chr1 19598348 152 - 122678785 tagttgaatagatgtgactgggtagcccaggtggttga------tctgggctccaggttgagagcctgt----------aacccaaagacctcaccctaaata---------acacggttggtctctGCCTTGTCCGAGGCCCCCAGGCCAAAAGATCACT---GCCCAGGAGATGAGGG i canFam3.chr1 C 0 I 3047 e mm10.chr7 3636438 95 + 145441459 I a score=2712050.000000 s hg38.chr19_GL949748v2_alt 99924 960 + 1064304 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaa------------------caagaCAGGTTCTGGGACAGA------------CAGGCCTGGGTCCAGACCCTGCTCTGTCCGACTGTGGCGAGTTACCTCAGGCTCACGGCCCTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCAAGGCTGGGCAGGCACTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----GTTTTTTTTGTG--------GTCTTTTCTGCGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCACCCCATCCTGGGAGGAGAGAGAGTGGGCGATAGAACCCAGGACGGGTGGGCCTGGGGCTCGGGGCTCCAGCTGCCTCACTGCACCCCTGCCATCGCCACCGCCTCACAGCCCTGGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGATGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATTTGGCCATCTCACATCGGTCCAGGCACAGGCCGTAGACACCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTTcactgtggctgacagct-gggctctgtttgcagtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccaatatttgaatatttgatgagatgatccgaggggcgtgcttagcatggggctggcatccagGCCGAGTGCACTCCC-------CCCGGCGTCTCCACAGTCACCACCGTCCTCGTTGTCAGCGTGCCTTACTGTCATCCTTACCTGA--TGGCCACTTATCAGCTGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTAGGAGCTGAGAGCACACACCTCT s panTro4.chr19 59033421 965 + 63644993 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaaa------------acaaGCAAGacaggttctgggacaga------------caggcctgggtccagaccctgctctgtcCGACTGTGGCAAGTTACCTCAGGCTCACGGCCTTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCAAGGCTGGGTGGGCACTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----TTTTTTTTTGTG----TGTGGTCTTTTCTGCGACCCTTTAGGTCAGGCACTGCTACTGGAATACA--CCCAGGGAGGCTGGCAGGTCACCCCATCCTGGGAGGAGAGAGAGTGGGCGATAGAACCCAGGACGGGTGGGCCTGGGGCTCGGGGCTCCAGCTGCCTCACTGCACCCCTGCCATCACCACCGCCTCACAGCCCTGGGCATATAGGTTAAACCTGCCCCAGG-AGCCTGATGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATCTGGCCATCTCACATCGGTCCAGGCACAGGCCGTAGACACCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATTGCTTcactgtggctgacagct-gggctctgtttgcagtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccgatatttgaatatttgatgagatgatccaaggggcgtgcttagcacggggttggcatccagGCCGAGTGCACTCCC-------CCCGGCGTCTCCA--GTCACCACCGTCCTCGTTGTCAGCGT--CTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCTGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGGAGGAGCTGAGAGCACACACCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911521 968 + 60714840 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgaga---ctgtctcaaaaaaaaaaaacaa-----------------GCAAGacaggttctgggacaga------------caggcctgggtccggaccctgctctgtccgactgtggcgagtgacctcaggctcatggccctgtgccctgcttggcctcccccagggatggggagaacaataGCACTGATGGCCAAGGCCGGTTGGGCATTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----TTTTTTTTTTTT--TTTTTGGTCTTTTCTGTGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACTGGTGGGCCTAGGGCTCGGGACTCCAGCTGCCTCACTGCACCCCTGCCATCGCCGCCGCCTCACAGCCCTAGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCCGGAAGGGAGGCCAGGGCTGGCCATCATCACTTcactgtggctgacagct-gggctctgtttgcggtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccaatatttgaatatttgatgagatgatccaaggggcgtgcttagcacagggctggcatccagGCCGAGCACACTCCC-------CCCGGCGTCTCCACAGTCACCACTGTGCTCGTCGTCAGCATGTCTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCCGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTGAGAGCACACACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102675038 970 - 106955855 ttgcagtgagctaagaccataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaa--------------caaTCAAGACAGGCTCTGGGACAGA------------CAGGCCTGGGTCCAGACCCTGCTCTGTCCAACTGTGGCGAGTGACCTCAGGCTCATGGCCCTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCGAGGCCGGGTGGGCATTTCCTGGCCCCATGCCCCAGCCCTGTGTGGG----CttttttttttttttttttggtcttttCTGTGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTTGCCCCTTCCTGGAAGGAGGGAGAGTGGATGATAGAACCCCGGACTGGTGGGCCTGGGGCTCAGGGCTCCAGCTGCCTCCCTGCACCCCTGCCATCGCCGCCGCCTCACAGCCGTAGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCAC-CCAGGTCTCTGCCTC--CATTTGCCCATCTCACATCGGTCCAGGCACAGGCCGTACACATCACAGGCCCGTAAGGGAGGCCAGGGCTGGC---CATCGCTTCACTgtggctgacagct-gggctctgtttgcagtttggattggaagcctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcgatgatcgcaccagcctgatatttgagtgtttgatgagatgagccgaggggcgtgcttagcacgggcctggcatccagGCCGAGCGCACTCCG-------CCCGGCGTCTCCACAGTCGTCACTGTCCTCGTCGTCAGTGTGTCTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCCGGGACATGGCTGTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTGAGAGCACACACCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960774 1005 + 64156825 ttgcag-gggccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaagaaaaagaaaaaaacagaaaCAtaagcaagacaggctctgggacagacaggcctgggttcaggcctgggtccagaccctgctgtgtccgactgtggcaagtgacctcaggctcatggccctgtgccctgcccggcctcccccagggatggggagaacaatagcacTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCACCCCCCAGGCCTGTGTAGGtttttttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCCGCCTCACTGCACTCCTGCCATCGCCACCGCCTCACAGCCCTAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCATAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcctgatatttgcatatttgatgagatgatccgaggggcatacttagcacagggctggcatccaggctgagcgcACTCCCCCGCC--GCCAGTGTCTCCACAGTCACCACTGTCCTCCTCGTCAGCGTGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54978415 1001 + 59248254 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaagaaaaagaaaaaaacagaaaCATAAGCAAGACAGGCTCTGGGACAGACAGGCCTGGGTTCAGGCCTGGGTCCAGACCCTGCTGTGTCCGACTGTGGCAAGTGACCTCAGGCTCGTGGCCCTGTGCCCTGCCCGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCACCCCCCAGGCCTGTGTAGG----tttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCCGCCTCACTGCACTCCTGCCATCGCCACCGCCTCACAGCCCTAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCATAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcctgatatttgcatatttgatgagatgatccgaggggcatacttagcacggggctggcatccaggctgagcgcACTCCCCCCAC--TCCAGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCGTGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094419 999 + 51301725 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaaaaaaaaacaaaaaacagaaacataagcAAGACAGGCTCTGGGACAGACAGGCCTGGGTTCAGGCCTGGGTCCAGACCCTGCTGTGTCCGACTGTGGCAAGTGACCTCAGGCTCATGGCCCTGTGCCCTGCCCGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGACAAGGCCAGGTGGTTGTTTCctggcccca-cccccaggcctgtgtagg-------ttttttttt-tgttttggttttttctgTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCatcctgggaggagggagagcggGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCcgcctcactgcactcctgccATCGCCACCGCCTCACAGCCCGAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCTGTaagggaggccagggctggc---tATCGCTGCACTGCGGCTGACAGCT-GGGCTCTGTTTGCAGTCTGGATTGGAACTCTGGCTCCATCACCTGCTGGCTGTCTTTCCGGCCACATGACTTGAAGCCTTGGTTTCCACATCTGAAAAGGGGGTGCAGTGATCACACCAGCCTGATATTTGCATATTTGATGAGATGATCCAAGGGGCATACTTAGCACGGGGCTGGCATCCAGGCTGAGCGCACTcccccccccGCCCGGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCGTGTCTTACTGTCATCCTtacctgactctgccacttaccagctgggACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46802241 1001 + 50890351 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaaaaaaaag-aaaaaacagaaaCACAAGCAAGacaggctctgggacagacaggcctgggttcaggcctgggtccagaccctgctgtgtccgactgtggcaagtgacctcaggctcatggccctgtgccctgcccagcctcccccagggatggggagaacaatagcacTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCA-CCCCCAGGCCTGTGTAGG----Gttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTTGCTCCATCCTGGGAGGAAGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTTGGGGCTCCAGCCGCCTCACTGCACTCTTGCCATTGCCACCGCCTCACAGCCCTAGGCATGTAGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCCATAAGGGAGGGCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcgcaccagcctgatacttgcatatttgatgagatgatccgaggggcatacttagcacggggctggcatccaggctgagcgcACTCCCCCACCCGCCCGGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCATGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACACCTCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45376347 897 + 49145316 ttgcagtgagccaagatcaca-cactgcattccagcctgagcgataaagtaagactcccatctcaaaaaaaaaacaaaa-------------aCAGGCaggacaggctctggggcaga------------caggcctgggtccagatcctgctctgtccggttgcagcaagtgacctcaggcTCATGGCCCTGTGCCCTGCCCGGCCTCCCTCGGGGTCGCAGAGAACAACAGCACCGATGGCCAA-------------------GGCCCCA--TTCCTGCCCTGTGTGGG----GTTGTTGTTTTG--------GTCTTTTCTGTGACCCTTTAGGTCAGGCACTGCTATTGGAACACACCCCCAGGGGTGCTGGTGGGTCACCCCATCCTGGGAGAAGGGAGAGTGGGCTTTAGAACCCAGGAGTGGTGGGCCTGAGGCTCGGGGCTCCAGCCACCTCATAA------GGCCATCACCACTGCCTCACAGCCCTAGGC-TGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCACACAGGGCCTCTGCCGCCTCATCTTCCCATCCCAGATCGGTCCAGGCACAGGATGTAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTggc---catcgcgtcgctgtggctgagagctggggctctgtttgcagtctggatcggaaccctggctccatcacctcccggctgtgtcgctagcgatgtgacttggagccttggtgtccacacctgaaaagggggtgcagtgatcacagcagcccgatgtttgagtattcgatgagatggcccaaagggcacacttagcacggagctggtatccaggctgagtgcACTCCC----------------------------------------------------AGCTGGTGTGCTTACCTGACTCTGCCGCTCACCAGCCCAGACGTGGCTCTGCACCCTGCCCTCATCCCCTCTT-CTGTGAAGAGGGAGCTAAGAGCATACACCTCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I e canFam3.chr1 19598500 3047 - 122678785 I a score=239302.000000 s hg38.chr19_GL949748v2_alt 100884 94 + 1064304 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCAGGACCCCAGGTAGAG-----CCAGAGGAGGAGCGCGCGCGGTTGCTTTGCTGTTACCTCTGTCTGTCTGT s panTro4.chr19 59034386 94 + 63644993 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCAGGACCCCGGGTAGAG-----CCAGAGGAGGAGCGCGCGCGGTTGCTTTGCTGTTACCTCTGTCTGTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912489 92 + 60714840 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCGGGA-CCAGGGTAGAG-----CCAGAGGAGGAGCGTGCGCGGTC-CTTTGCTATTACCTCTGTCTGTCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676008 94 - 106955855 AGAGCCCACGGGTGGAAAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CCAGAGGAGGAGTGCGCGCGGTTGCTTTGCTATTACCTCTGTCTGTCTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59961779 94 + 64156825 AGAGCCCATGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979416 94 + 59248254 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095418 94 + 51301725 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCGGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803242 94 + 50890351 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAATGCCTGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377244 66 + 49145316 AGAGCCTGC-----------------------------AGTGGAG-----CCAGATGAGAAGCACCCACTGTTGGTGTGCAGTTATGTCTGTCTGTCTGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3636533 97 + 145441459 AGAGCCCACGGGTATGAGGCTTACCTCCCAGAGTCTGGGGTATGGCTGCCCTAGATGAGGAGTGACTATTGTAG--TGGCTGTTACCT-TCTCTAGAGGT i mm10.chr7 I 95 C 0 e canFam3.chr1 19598500 3047 - 122678785 I a score=548290.000000 s hg38.chr19_GL949748v2_alt 100978 133 + 1064304 CTCACACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG s panTro4.chr19 59034480 133 + 63644993 CTCACACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912581 133 + 60714840 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACGGAGGGGAAGGTGA----------------------------GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676102 119 - 106955855 CTCATACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTTCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCAC------------------------------------------GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59961873 161 + 64156825 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgaggagaggaaggtgagggggggaaggtgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979510 161 + 59248254 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACGGAGGGGAAGGTGAGGAGGGGAAGGTGAGGGGGGGAAGGTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095512 161 + 51301725 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCAGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgagcgggggaaggtgaaggggggaaggtgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803336 134 + 50890351 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgag---------------------------gg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377310 133 + 49145316 CTCACACAGATTCCATTCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCTAAGTGCACGCTGGCAGCCCGCGTAGACAGTTTCCATGAGAGCACGGAGGGGAAGGTGA----------------------------GG i calJac3.chr22 C 0 C 0 s mm10.chr7 3636630 113 + 145441459 T-----CAGTTTCCTTTCTC-CTTGCCATTGCTCCAGGATCTCCGGCGGAAGGCGGCCCGCCTAGTGGCTGCCAAGTGTACACTGGCAGCTCGTGTGGACAGCTTCCATGAGAGCAC------------------------------------------AG i mm10.chr7 C 0 C 0 s canFam3.chr1 19601547 131 - 122678785 CTCCCATTGACTCTGCCCCC--TTTCTGCTGCCTCAGGATCTCCGGCGGAAAGCGGCTCGGCTGGTGGCTGCCAAGTGCACACTGGCAGCCCGTGTGGACAGCTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG i canFam3.chr1 I 3047 I 930 a score=1194434.000000 s hg38.chr19_GL949748v2_alt 101111 411 + 1064304 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCTGGGCCTGGGGTGTCTCTGCAGGGAGA-CCCTCAGCAGGGAG----------------CCCACCCCAGCGAGCACTGTCCTACCAAGGCGGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctaggtctgctgttggaaggtagcatgaacctactggcttcaaacagtgcaggtgtggccgggtgcagtagctcacgcctgtaatcccagcactttgggaggccagggtgggcgggtcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcacgcacctgtaatcccagttactcaggaggctgaggcaggagaatt s panTro4.chr19 59034613 407 + 63644993 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTC-----CTCTGGGCCTGGGGTGTCTCTGCAGGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCGAGCACTGTCCTACCAAGGCGGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctaggtctgctgttggaaggtagcatgcacctactggcttaaaacagtgcaggtgtggccgggtgcagtagctcacacctgtaatcccagcactttgggaggccaaggtgggcgggtcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcacgcacctgtaatcccagttactcaggaggctgaggcaggagaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912714 411 + 60714840 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCT-GGTCTGGGGTGTCTCTGCGGGGAGAGCCCTCAGCAGGGAG----------------CCCGCCCCAGCGAGCACTGTCCTACCAAGGCCGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctagggctgctgttggaaggtagcatgaacctactggcttaaaacagtgcaggtgtggccgggtgcggtagctcacgcctgtaatcccagcactttgggaggccaaggtgcgtgggttacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcatgcgcctgtaatcccagttactcaggaggctgaggcaggagaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676221 411 - 106955855 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTGT-GGCCTGGGGTGTCTCTGCCAGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCGGGCACCGTCCTACCAAGGCGGAGGCAGTGTTTCTGCCC---ACCCTCCCTGGGGTCAGGAACCCCCTTCCCCAGTGGG---gtttcctaggactgctgttggaaggtagcatgaacctactggcttaaaacagtgcaggtgtggccgggtgcggtagctcacgcctgtaatcccagcacttcgggaggccacggtgggcagatcacaaggtcagg-----------------agtttgagaccagcctggtcaacatggtgaaaccctatctc---------t----accaaaattagcccggtgtggtggcacacacctgtaatcccagttactcaggaggctgaggcaggagaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59962034 422 + 64156825 aggggaaggtgagggggggaaaagggcggCCGGGCGTCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGTCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGTAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTTCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagttttggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcataaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979671 412 + 59248254 GGGGGAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGTCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTTCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagtgcaggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcataaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095673 428 + 51301725 aggggaaggtgag----------gggCGGCCGGGCATCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGCCCTCAGCAGGGAGCCCACCCCAGCAAGCACCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGTG-CCCTTTCCCCAGTGGGTTcattttctagggctgctgtTGGAAAGTAGCACAAACCTACTGGCGTAAAACAGTGcaggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803470 412 + 50890351 gggggaaggtgag----------gggcggCCAGGCGTCTTTTCCTCTGGGCCTGGGGTGTCTCTGTGGGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTCCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagtgcaggtttggccgggcgcagtggctctcgcctgtaatcccagcactttggaaggccaaggcaggtggatcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacatacctgtaatcccagttactcaggaggctgaggcaggagaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377443 418 + 49145316 AGGGGAAGGAG-G----------GGGCGGCCGGGCGTCCTTTCCTCTGGGCCTGGGGTGTCTGTGCGGGGAGAGCCC-CAGCAGGGAG----------------CTCACCCCAACAAGCACTGTCCTACCAGGGCAGAGGCAGTGTTTCTGCTG---ACCCTCCCTGGGGTCAGGCG-CCCCTTCCCCAGtgtgttcattccctagggctgctataggaaggtagcacaaacctactggcttaaaacagcacaggtttggctgggcaagttggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtcagg-----------------agttcgagaccagcctggccaacatggtgaaaccacgtctctattatagat----acaaaaattagtcaggcatgg-ggtgcgcacctgtaatcccagttactctggaaac--aggcaggagaatc i calJac3.chr22 C 0 C 0 s mm10.chr7 3636743 384 + 145441459 AAGGGAAGGTGAG----------GAGAGGACAGGCATCTGTCCCTG-GTGCTTGGGGTCTTTTCATGGGAAGATGCTACTTCAGAGA-----------------CCTCTTCTGACTAGCA------------GACAGA-----TGTGTCTGTCTGCAACCCCTACTGAGGCCA-----TCACATTCTCAG----------CTCTGTATCAGTTATGACAACTCACTATAGATGGAGTAGCTTCATATA----AAAGTTGGCTAGG------------CCTctttaacatcaatactt-gagagacagaggtgggaagatcattagtttgaggcagtctgggttatataagtttcaggccagactgggctgcatagtgaaatcctgtgtt---------tgaaaagaaaaaaAGCCCAgggctggagatgcggctccatcacttcagttcct--gcatgc--aagcatgagaact i mm10.chr7 C 0 I 1444 e canFam3.chr1 19601678 930 - 122678785 I a score=2579485.000000 s hg38.chr19_GL949748v2_alt 101522 902 + 1064304 gcttgaacctgggagacggaggttgcagtgaactgagattgcatcattgcactccagcttgggtgacatagcgagactccatctaa-------aaacaaaaacaaaaa------------acagtacaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcatcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcaccctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttttgttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacgtcccttttgccctgt---------------gattctgggaattagaacatgggcctctttgggCATGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGtaattattcagttaccttctgtcttccttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacccggcctggcacagcgttcaggtgttccgtGTCCC---CTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggg-tgcagctgtgagtagcacagacaggacccctgccccgtggcgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa s panTro4.chr19 59035020 908 + 63644993 gcttgaacctgggagacggaggttgcagtgaactgagattgcatcattgcactccagcttgggtgacatagggagactccatctaa-------aaacaaaaacaaaaa------caaaaaacagtacaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagtgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcaccctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttt-gttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacgtcccttttgccctgt---------------gattctgggaattagaacatgggcctctttgggCATGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGtaattattcagttaccttctgtcttccttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacccagcctggcacagcgttcaggtgttccgtGTCCC---CTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtgggggctgcagctgtgagtagcacagacaggacccctgccccgtggcgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55913125 917 + 60714840 gcttgaacctgggagacagaggttgcagtgaactgagattgcatcattgcactccagcctgggtgacagagcgagactccatctaa-------aaataaaaacaaaaacaaaaacaaaaaacagcgcaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttctagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcactctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttttgttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacatcccttttgccctgt---------------gattctgggaattagaacatgggcctccttgggCATGTGTGTGTTGGTGGGGGTGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGatgttattcaagtaattattcagttatcttctgtctt-cttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacctagcctggcacagcgttcaggtgttcCGTGTCCCCTTCTTCTTCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggggtgcagctgtgagtagcacagacaggagccctggcccgtggcgtggacattcttgtgggggccgggtcaaagagacagtcaacaggtgaaccttgtcctgtgtctagcagtgctaagtcaacaccaagaagaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676632 924 - 106955855 gcttgaacccgggagacagaggttgcagtgaactgagattgcatcattgcactgcagcctgggtgacagagcaagacaccatctaa-------aaaacaaaacaaaac---------aaaacagtgcaggtttattatctgtggtcctgtaagtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcatggccctccctctgtctgtggagccagccacatagcaccctcagccctctctctgaccctgcttctgtcttcatatctcggcctctgtttt-tctcccctcctctattttaagggcccttgtggctatactgagcctacccagatggtcccggatggtcttcccagctcacagtccttaaaatccttcttaacctcgtcacatccctgttgccctgtgaagtgacattcacagattctgggaattggaacatggacctccttgggCGTGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGACCTGCCCCCGCTCCAACAGAGGAtgttactcaagtcattattccgttaccttctgtcttccttggtagaggtactcgggagaggagacacgttttctgtcttgtgaactgtcgtttgcctagcacccagcctggcacagcattcaggtgttctgtGTCCCCTTCTTCTCCTTTCCCTCTCCCCACCTCACCCctggtctgggtgtggggg-tgcagctgtgagtagcacagacgggagtcctgccccgtggtgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcagtgctaagtcaacaccaagaagagaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59962456 935 + 64156825 gcttgaaccagcgagccagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaagaaa-aaaacaaaacaaaacaaaat-aaaaaaacagtgcaggtttattatctgtggtcctgtaggtcaggagtctaaaataagtttcactaagttgaagtcagggtgtcagcccggagggttccttctaggggagtcaagggataatccattcccttgtc-tttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaatatccttcttaatctcttcacgtcccttttgccctgtgaggtgacattcagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgtcttccgcaccaggatctgtccccgctgcaacaggggatgttattcaagtaattattcagttacttcctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcgtttgccaagcacccagcctggcatggcgttcaaGTGTTCCGTGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgt-gggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggtcgaggagacagtcaacaggtgaaatctgtcctgcgtctagcggtgctaagtcaacactaagaagaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54980083 936 + 59248254 acttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaagaaa-aaaacaaaacaaaacaaaat-aaaaaaacagtgcaggtttattatctgtggtcctgtaggtcaggagtctaaaataagtttcactaagttgaagtcagggtgtcagcccggagggttccttctaggggagtcaagggataatccattcccttgtc-tttccagcttctaggggtcactggcaccccttagctcatggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaatatccttcttaatctcttcacgtcccttttgccctgtgaggtgacattcagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgtcttccgcaccaggatctgtccccgctgcaacaggggatgttattcaagtaattattcagttactttctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcgtttgccaagcacccagcctggcatggcgttcaaGTGTTCCGTGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggtcgaggagacagtcagcaggtgaaatctgtcctgcgtctagcggtgctaagtcaacactaagaagaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47096101 937 + 51301725 gcttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaaaaaacaaaacaaaacaaaacaaaat-aaaaaaacagtgcAGGTTTATTATCTGTGGTCCggtaggtcagaagtctaaaatgagTTTCACTGAGTTGAAGTCAGGGTGTCAGCCCGGAGGGTTCCTTCTGGGGGAGTGAAGGGATAATCCATTCCCTTGTC-TTTCCAGCTTCTAGGGGTCACTGGCACCCCTTAGCTCGTGGCCCTCCCTCTGTGTGCGGAGCCAGCTGCATAGCACCCTCAGACCTCTCTCTGACCCTGCTTCTGTC-TCATATCT-GGCCTCTGTTTTTGTTCCCC-CCTCTATTTTAAGGGCCCTTGTGGCTATACTGAGCCTACTCAGATGGTCCAGGATAGTCTTCCCAGCTCACAATCCTTAATATCCTTCTTAATCTCTTCACGTCCCTTTTGCCCTGTGAGGTGATATTCAGAGGTTCTGGGAATTAGAACATGGACCTCCTTGGgcatgtgtgtgttggtgggggtATAATTTGTCTTCCGCACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGTAATTGTTCAGTTACTTTCTGTCTTCCTTGGTAGACGTACTCGGGAGAGGAGACACATTTTCTGTCTTGTGAACTGTCGTTTGCCAAGCACCCAGCCTGGCATGGCGTTCAGGTGTTCCCTGTCCccctcttctcctttccctctccccatctcacCCCTGGTCTGGGTGTGGGGGGTGCAGCTGTGAGTAGCACAGACAGGAGCCCTGCCCCGTGGCAGCGACATTCTTCTTGGGGCCGGGTCGAGGAGACAGTCAACAGGTGAAATCTGTCCTGCGTCTAGCGGTGCTAAGTCAAcaccaagaagaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803882 928 + 50890351 gcttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccgtctaa-------aaaacaaaacaaaacaaaataaaaaaaacagtgcaggtttattatctgtggtcctgtagatcagaagtccaaaatgagtttcactgagttgaagtcagggtgtcagcccggagggttccttctgggggagtcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcaggtggtccaggatagtcttcccagctcacaatccttaatatc---cttaatctcttcatgtcccttttgccctgtgaggtgacattgagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgccttccgcaccaggatctgtccccgctccaacaggggatgttattcaagtaattattcagttactttctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcatttgccaagcacccagcctggcatggcgttcaggtgttctgtGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCcc-ggtctgggtgttgggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggttgaggagacagtcaacaggtgaaatctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377861 870 + 49145316 gcttagacccaggaggcagaggttgcagtgagctgagattccactattgcactccagcctaggtgacagagtgagactccatctaa-------a--------------------aaaaaaccagcacaggtttaccatct--------gtaggtcggaagtccaaaatgggtttcattgggctgaagtcagggtgtcagcccagaggcttccttctgggggact-----------------ccttgccttttccagctgctaggggtcgccggcatcccttagctcgtggcccttcttcc-tttgc-gagccagctgcgcggcaccctcagacctatctc--accctgcttctgtcttcagatcttggcctctgtctt----tccc-catctattttaagggcccttgtggctatactgagcctgctcacatggtccaggatagtcttccgagctcacactccttaaactc---cttaacctcttcacgtcccttttgccctg--aggtgacattcacaggttctgggagttagaacacggacctcctggggCATGTGTGTGTTGGTGGGGGCATAGtttgccttccgcaccaggatctgtcccc-ctccaacaggggatactattcaagtaattattcagttcacttctgtc-tccttggtagatgtactcgggagaggagacatgttttctgtcttgtgaactgttgcttgccaagcaccCCGCCTGGCTCGGCAATCAGGTGTTCCATCTCCCC--CTCCTCCTTTCCCTCTCTCCGTCTCACCCCCGGCctgggtgtagggaatgcagctgtgagtagcgcagaca-gagccctgtcccatggcgtggatactctcactggggccgggttg-ggagacagtccacaggggcaatctgtcctgtgcctagtaggactaggtaaacatcaagaagaaaaa i calJac3.chr22 C 0 I 955 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I a score=14287.000000 s hg38.chr19_GL949748v2_alt 102424 7 + 1064304 gaaaggg s panTro4.chr19 59035928 5 + 63644993 gaa--gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914042 7 + 60714840 gaaaggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677556 7 - 106955855 gaaaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59963391 7 + 64156825 gaaaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54981019 7 + 59248254 gaaaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47097038 7 + 51301725 gaaaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46804810 7 + 50890351 gaaaggg i chlSab2.chr6 C 0 I 1004 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I a score=50743.000000 s hg38.chr19_GL949748v2_alt 102431 33 + 1064304 ggtggcggt--gaggcagcattaggtgctgattta s panTro4.chr19 59035933 33 + 63644993 ggtggcggt--gaggcagcattaggtgctgattta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914049 33 + 60714840 ggtTGCGGT--GAGGCAACATTAGGTGCTGATTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677563 33 - 106955855 ggttggggt--ggggcgacatcaggtgctgattta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59963398 34 + 64156825 ggttggggt-gggggcgacattaggtgctgattta i rheMac3.chr19 C 0 I 1088 s macFas5.chr19 54981026 34 + 59248254 ggttggggt-gggggcgacattaggtgctgattta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47097045 35 + 51301725 ggttggggtggggggcgACATTAGGTGCTGATTTA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e chlSab2.chr6 46804817 1004 + 50890351 I a score=4687.000000 s hg38.chr19_GL949748v2_alt 102464 6 + 1064304 actaag s panTro4.chr19 59035966 6 + 63644993 actaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914082 6 + 60714840 ACTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677596 6 - 106955855 actggg i nomLeu3.chr10 C 0 I 1118 s macFas5.chr19 54981060 6 + 59248254 cctggg i macFas5.chr19 C 0 I 1349 s papAnu2.chr19 47097080 6 + 51301725 CCTGGG i papAnu2.chr19 C 0 I 1246 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e chlSab2.chr6 46804817 1004 + 50890351 I e rheMac3.chr19 59963432 1088 + 64156825 I a score=6650.000000 s hg38.chr19_GL949748v2_alt 102470 26 + 1064304 gCACGTGGATACTCGGGGGGTCCGCT s panTro4.chr19 59035972 26 + 63644993 gCACGTGGATACTCGGGGGGCCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914088 26 + 60714840 TCACGTGGATACTCGGGGGGCCCACT i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e nomLeu3.chr10 102677602 1118 - 106955855 I e chlSab2.chr6 46804817 1004 + 50890351 I e papAnu2.chr19 47097086 1246 + 51301725 I e macFas5.chr19 54981066 1349 + 59248254 I e rheMac3.chr19 59963432 1088 + 64156825 I a score=3600.000000 s hg38.chr19_GL949748v2_alt 102496 1 + 1064304 C s panTro4.chr19 59035998 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914114 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678720 1 - 106955855 C i nomLeu3.chr10 I 1118 C 0 s rheMac3.chr19 59964520 1 + 64156825 C i rheMac3.chr19 I 1088 C 0 s macFas5.chr19 54982415 1 + 59248254 c i macFas5.chr19 I 1349 C 0 s papAnu2.chr19 47098332 1 + 51301725 C i papAnu2.chr19 I 1246 C 0 s chlSab2.chr6 46805821 1 + 50890351 C i chlSab2.chr6 I 1004 C 0 s calJac3.chr22 45379686 1 + 49145316 C i calJac3.chr22 I 955 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I a score=141690.000000 s hg38.chr19_GL949748v2_alt 102497 46 + 1064304 AGAGGAGGCCTGGGTGGGCAGCCCACGCGAGCAGCTGCAGGACCTC s panTro4.chr19 59035999 46 + 63644993 AGAGGAGGCCTGGGTGGGCAGCCCACGCGAGCAGCTGCAGGACCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914115 46 + 60714840 AGAGGAGGCCTGGGTGGGCAGCCCATGTGAGCAGCTGCAGGACCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678721 46 - 106955855 AGAGGAGGCCTGTGTGGGCAGTCCACGTGAGCAGCTGCAGGACCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59964521 46 + 64156825 AGAGGAGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982416 46 + 59248254 agaggaGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098333 46 + 51301725 AGAGGAGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46805822 46 + 50890351 AGAGGAGGCCTGGGTGGGCGGTGCACCTGAGCAGCTGCAGGACCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45379687 46 + 49145316 ACAGGAGGCCTGGGTGGGCAGCCCACGTGAGCAGCAGCAGGACCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3638571 43 + 145441459 AGATGTTGGCTGAGGGGACAGTTTACATGGCTGGCCACCG---CTT i mm10.chr7 I 1444 C 0 e canFam3.chr1 19601678 930 - 122678785 I a score=1616979.000000 s hg38.chr19_GL949748v2_alt 102543 416 + 1064304 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCCGACTC-------CCTGGCGCCGCCCACCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCAGAGCGC-----cctc--------ctcaaccccacagccagccagccgccaccgccctctgcctcctgccaccgccCCTCCTCTC-GTCCTGTGGCC s panTro4.chr19 59036045 422 + 63644993 CCCCTCCCCCTTGCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCATGGAGGGGAGAAGCTGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCGCCGCCCACCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCAGAGCGC-----CCTC--------CTCAACCCCACAGGCAGCCAGCCGCCACTGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCCTTGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914161 416 + 60714840 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCACGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CTCAGAGCGC-----CCTC--------CTCAACCCCACAGGCAGCCAGCCGCCACTGCCCTCTGCCTCCTGTCACCGTCCCTCCTCTC-GTCCTGTGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678767 416 - 106955855 CCCCTC------GCCCTCCCTAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCATGGAGGGGAAAGGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGGCAGCCGCCACTGCCCTCTGCCTCCTGCCGCCGTCCCTCCTCTC-GTCCTGTGGCC i nomLeu3.chr10 C 0 M 163 s rheMac3.chr19 59964567 415 + 64156825 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTTGACAAGTGGCAGGAGCCCCCCCCCGTGAAGCAGGTGAAGCCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGAGGCCC-GGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCAGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAT-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACCGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCTGTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982462 415 + 59248254 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCCCCCCCCGTGAAGCAGGTGAAGCCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGAGGCCC-GGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCAGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAT-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACCGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCTGTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098379 417 + 51301725 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAACGCAAATTTGACAAGTGGCAGGAGCCGCCCCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCACACCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTTGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACcgccctctgcctcctgccaccgtCCCTCCTCTC-GTCCTGTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46805868 413 + 50890351 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCCCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGACGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATAGAGGGGAGAGGCCGGCG---TCCTCCCAGCTGACTC-------CTTGGCACCGCCTGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTTGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------TTTACCCCCACAGGCAGCCAGCCGCCACCACCCTCTGCCTCCTGCCACTGTCCCTCCTCTC-GTCCTGTGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45379733 423 + 49145316 CCCCTTGCTCTCACCCTCCCTAGGTGGGCTACGAACTCAAGGACGAGATCGAGCGCAAGTTTGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAACCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGTGGCCGCAGGTGAGAGCCCCTGGGGGTCCAGTAGGCATGGGGGTCGTGGAGTGGAGGAGCCGGTG---TCCCCCCAGCTGACTC-------CCTGGTACCGCCTGCCCAC-------CCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACCGAGATCCGGAAACAGGCTAACCGCATGAGCTTCGGAGAGGTTAGATG---CCCCTAGCGCTGAAGCCATGAGGAGAACTCACGGCCACAGG----CAGCCGCCGCCGCCCCCTGCCTCCCACCGCCTTCCCTCCTCTCTGCCCTGTGGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3638614 405 + 145441459 CTCAAC-------TCCCCCCTAGGTGGGCTACGAACTAAAGGATGAGATTGAGCGCAAATTTGATAAGTGGCAGGAGCCACCACCCGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTTGATGGGCAGCGGAAGAAGCGAGGGGGCCGAAGGTAAGGAGTTCTGATGGGGCTAGACGTTTGGAAGTGGGGAAGGGAAACAACT-------TCTTCCCAGCCAGCTCCCTATATCCTGTTAACACCCACTTGC------CCTAGGTACCGCAAGATGAAGGAACGGCTAGGACTGACGGAGATCCGGAAGCAGGCCAACCGCATGAGCTTTGGAGAGGTCAGGCTTGATCCACAGTAC-----CAGT--------GGGACCATATTAGG---------GTCTTCTCTCTGCACATCCTGCTGCCATCCCTCCTCCCCACCCTGTAATC i mm10.chr7 C 0 C 0 s canFam3.chr1 19602608 349 - 122678785 CCCCCT------GCCCTCCCCAGGTGGGATATGAGCTGAAGGATGAAATCGAGCGCAAGTTTGACAAATGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTGGACGGGCAGCGCAAGAAGCGAGGTGGCCGCAGGT---AGGCCCTGAGGG-CCAGTGGGGGTGAAG---AGGAGGGGAAGGGGCTTGTGAC-----CCCAGCTGAC-C-------CCTGGCGC------------CCCTCCCCAGGTACCGCAAGATGAAGGAGCGGCTAGGGCTGACCGAGATCCGGAAGCAGGCCAACCGCATGAGCTTCGGAGAGGTCAAA-----GCCTTAGTCT-----GGAT--------GTCCCCACCACA----------------------------------------TTTCTTCTC-GG-CTGAGGCA i canFam3.chr1 I 930 C 0 a score=237876.000000 s hg38.chr19_GL949748v2_alt 102959 126 + 1064304 CTGGCTCATGTCTAGGGCGCTGCCCCAGCCTCCTCCC-----CCCCGGCCTCTATTCTCGTTTCCATCCATTCAGCCCCAAAGCGACCCTCGCGGCCCTTGGAGCCTGTGTCTCCGCTGCTTAGAGCCCCC s panTro4.chr19 59036467 131 + 63644993 CTGGCTCATGTCTAGGGCGCTGTCCCAGCCTCCTCCCTCATCCCCCGGCCTCTATTCTCATTTCAATCCATTCAGCCCCAAAGTGACCCTTGCAACCCTCGGAGCCTGTGTCTCCGGTGCTTAGAACCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914577 129 + 60714840 CTGGCTCATGTCTAGGACACTGTCCCAGCCTCCTCCCTCATCCCCCGGCCTC--TTCTCGTGTCCATCCATTCAGCCCCAGAGTGACCCTTGTAACCTGCGGAGCCTGTGTCTCCGGCGCTTAGAGCCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59964982 130 + 64156825 CTGGCTCATGTCTAGGGTGCTGTACCAGCCTCTTCCCTCATCCCCCAGCCTCTACTCTCATTTCCATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCCGCGCTTAGAG-CCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982877 131 + 59248254 CTGGCTCATGTCTAGGGTGCTGTACCAGcctcttccctcatcccccagcctctactctcatttccatccattcagcccCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCCGCGCTTAGAGCCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098796 131 + 51301725 CTGGCTCATGTCTAGGGTGCTGTCCCAGCCTCTTCCCTCATCCCCCAGCCTCTACTCTCATTTCCATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCTGCGCTTAGAGCCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806281 130 + 50890351 CTGGCTCATGTCTAGGGTGCTGTCCCAGCCTCTTCCCTCAT-CCCCAGCCTCTACTCTCATTTCTATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCTGCGCTTAGAGCCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380156 89 + 49145316 CTGGCTCATGTCTAGGGCACGA--------------------TCCTGGCCTCTACTCTGGTTTCTATCCATTCAGCCCCAAAGTGACCCTTGTCACC----------------------CTCAGAGTCCCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3639019 109 + 145441459 TGAGAGCAGATCTGGGG--CTACCCAACCCTCCTCCCTCTT-GTCTAGCCTCTCCTCTTA-----AACCA-CCTTCTCCATGGTGATCTTTGCAGCTCTCAGCTGGCTGGCTTCCCAC------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19602957 86 - 122678785 ----------------------------GCACCTCAC-----CTCCAGCCTC--CCCCCACATCCATGTA-----CCCTGAAGGGACCTATGCAGCATTCAG----TGTTGGCCCTGTCCCCCGACCCCC- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102679183 163 - 106955855 M a score=89498.000000 s hg38.chr19_GL949748v2_alt 103085 27 + 1064304 GCGGCTTCCCATCGCCCCGGGCTCCTT s panTro4.chr19 59036598 27 + 63644993 GCAGCTTCCCATCGCCCCAGACTCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914706 27 + 60714840 GCAGCTTCCCATTGCCCCAGGCTCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679346 27 - 106955855 GCAGCTTCCCATCGCCCCAGGCTCCTT i nomLeu3.chr10 M 163 C 0 s rheMac3.chr19 59965112 27 + 64156825 GCAGCTTCCCATCGCCCCGGGCTCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983008 27 + 59248254 GCAGCTTCCCATCGCCCCGGGCTCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098927 27 + 51301725 GCAGCTTCCCATCGCCCCAGGCTCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806411 27 + 50890351 GCAGCTTCCCATTGCCCCAGGCTCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380245 27 + 49145316 GCTGCTTCCCATCACCCCAGGCTCCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3639128 19 + 145441459 GCAGCT--------CTCCAGGCTGCTT i mm10.chr7 C 0 I 241 s canFam3.chr1 19603043 22 - 122678785 -----ACCCTTTTGTACACACCTCCCT i canFam3.chr1 C 0 C 0 a score=487033.000000 s hg38.chr19_GL949748v2_alt 103112 174 + 1064304 GGCCGGTTCCTCCCTGCCCAGAGGCTCCTTAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAGCGTCAT-CCCCTTGGTCCTGCAGGACCGAACTCAGAGGCCACCTCATCCTATTAAACCTGTTCTGGTTCCTGACATCCCCCGACC s panTro4.chr19 59036625 174 + 63644993 GGCCGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCCGCCAGTCTCCTCTGTTACCCCAGCGTCAT-CCCCTTGGTCCTGCAAGACCGAACTCAGAGGCCACCTCATCCTATTAAACCTGTTCTGGTTCCTGGCATCCCCCGACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914733 174 + 60714840 GGCCTGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCTGCCAGTCTCCTCTGTTATCCCAGCGTCAT-CCCTTTGGTCCTGCAAGACCGAACTCAGAGGCCACTTCATCCTATTAAACCTCTTCTGGTTCCTGACATCCCCCAACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679373 168 - 106955855 TGCCGGT--CTCCCTG-CCAGAGGCTCCGCGGTGACCTGCTGCACTGCCG-CCCGTCCCTGGG-CCTGCCAGTCTCCTCTGTTATCCCAGCATCAT-CCCCTTGGT-CTGCAAGACCCAATTCAGAGGCCATCTCATCCTATGAAACCTATTCTGGTTCCTGACACCCCCCAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59965139 173 + 64156825 GGCTGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACCGCCG-CCCGTTCCCGGGCCCCGCCAGTCtcccctgttatcccaacgtcat-ccccttggtcctgcaagacccaactcagaggccacctcatcctatgaaacctgttctggttccTGACACCCCCCAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983035 174 + 59248254 GGCTGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACCGCCGCCCCGTTCCCGGGCCCCGCCAGTCTCCTCTGTTATCCCAACGTCAt-ccccttggtcctgcaagacccaactcagaggccacctcatcctatgaaacctgttctggttccTGACACCCCCCAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098954 175 + 51301725 GGCCGGTTCCTCCCTGCCCAGAGGCTCTGCAGTGCCCTGCTGCATGGCCGCCCCGTTCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAACATCATCCCCCTTGGTCCCGCAAGACCCAACTCAGAGGCCACCTCATCCTATGAAACCTGTTCTGGTTCCTGACACCCCCCAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806438 174 + 50890351 GGCCGGTTCCTCCCTGCCCAGAGGCTCTGCAGTGCCCTGCTGCATGGCCGCCCCGTTCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAACGTCAT-CCCCTTGGTCCTGCAAGACCCAACTCAGAGGCCACCTCATCCTATGAAACCTGTTCTGGTTCCTCACACCCCCCAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380272 150 + 49145316 GGCCAGTTTCTCC-------------------TGCCCT-CTGCACGGCCCCTCCCTCCGTGAGCCCC----GTCTCCTCCGTTATCCCAGTGTCAT-CCCCTTGGTCCTGCAAGACCCAGCTCAGAGGCCACCTCATCCTGTGGAACCTGTTCTGGTTCCAGACACCCCCCAACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19603065 145 - 122678785 -GTCGGGTTGGATCTGCCCAGGG-------AGGGTCCTTCCTCA-GGCTTCACC----------TCTGCCAGACTC----ATTACCCAAGCATCAT-CCTCATGGTCCTGCAAGAACCAGCTCAAACACCCTCTAGTCA-GCAAGCCCAGTTTTGGTTGTTGACACTGCA----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3639147 241 + 145441459 I a score=4046664.000000 s hg38.chr19_GL949748v2_alt 103286 1248 + 1064304 CACACGAGTAAGGAAGGAATGGCCTCCCAACTCTGAGCTCACAGAGCAGTGCTGGGACCGGGCCCCTCTCAGGCTCCCCGGCATCCCCCGCGTGTGTGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCGGAGCAGGTGCCCGTGGGACCGGCCGGCTGGTGACCGCTGGGCTTCCGGCTGGTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCTCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACACAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTATATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGccggctctgtccccagccct-----gagaccttggcaaggccccttgccctctgcccctgtgaagaaggccaggatgagtctcctcatggggctgttgtggagggtgtggtg-----acgaggtat-gcagagga-cgtaga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGCCCAGCGCTGAGCAGTC--CTCGTGAGCACGCACTG-CTTTAGAACCAGGCCCACAGCTGTGTTCAGGGCACCCAGTTCCTCTGTC--GGGCTGTGAGCGGGTA--ACACTGCTCAGCCTCCAGGCCCTCCAGTTCAAAACGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCGAGAAAGTTCCCGGCTAGGCGGGCTTGGATGTCAAGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCACGGAG--GCGAG-ACAGCAGC-GAGCTCATCTGCCcagtcagcgggtgtctacgcagcacctgctgagttctgtcagtgttcccggctctggggatgaagcaacga--atgag--agacaagtcttaccttcttggagccagt-gggtggccgggcgcagacagctcagtaagatgtccagtgtagg s panTro4.chr19 59036799 1248 + 63644993 CACACGAGTAAGGAAGGAATGGCCTCCCAACTCTGAGCTCACAGGGCAGTGCTAGGACCGGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGTGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCGGAGCAGGTGCCCGTGGGACCGGCCGGCTGGTGACCGCTGGGCTTCCGGCTGCTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCTCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTCGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGccggctctgtcctcagccct-----gagaccttggcaaggccccttgccctctgcccctgtgaagaaggccaggataagtctcctcagggggctgttgtggagggtgtggtg-----acgaggtat-gcggagga-cgtaga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGCGCTGAGCAGTC--CTCGTGAGCACGCACTG-CTTCAGAACCAGGCCCACAGCTGTGTTCAGGGCACCCAGTTCCTCTGTC--GGGCTGTGAGCGGGTT--ACACTGCTCAGCCTCCAGGCCCTCCAGTTCAAAATGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCGAGAAGGTTCCCGGCTAGGCGGGCTTGGATGTCAAGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCGTGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-GAGCTCATCTGCCcagtcagcgggtgtctacgcagcacctgctgagttccatcggtgtccccggctctggggatgaagcgacga--atgag--agacaagtcttaccttcttggagccagt-gggtggccgggcacagacagctcagtaagatgtccagtgtagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914907 1250 + 60714840 CACACAAGTAAGGAAGGAATGGCCTCTCAACTCTGAGCTCACAGAGCAGTGCTAGGACCGGGCCCCTCTCAGGCTCTCCAGCATACCCCGCTTGTGGGGGCCCCCAGGCCTCAGCCGGGCTGAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACCGCTGGGCTTCCGGCTGGTGGAGGGGATGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCCCTTCTCCCTAGATCGAGGAGGATGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGAACCAGGTGGGGCTGGGGACCAA--GGGACACAAGGTTGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGctggctctgtccctggcccc-----gagaccttggcaaggccccttgccctctgcccctgtgaagcaggccaggatgagtcccctcacggggctgttgtggagggtgtggtg-----acgaggtat-gcagagga-cgtagg-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGCGCTGAGCAGTC--CTCGTGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGTGCCCATTTCCTCTCTCTGGGGCCTTGAGCGGGTT--ACAGTGCTCAGCCTCCAGGCCCTCCAGTTCAAAATGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCAAGAAAGTTCCTGGCTAGGTGGGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCGGTGCCTCGGTT----CACCATCCACAGAGCAGGGCCAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-CAGCTCatttgctgagtcagcgggtgtctatgcagcacctactgagttctatcggtgttgccggctctggggatgaagcgatga--atgag--agacaagtcttaccttcatgcagccagt-gggtggccgggcacagacagctcagtaagatgtccagtgtagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679541 1250 - 106955855 CACACGACTAAGGAAGGAATGGCCTCTCAACTCTGAGCTCACAGAGCAATGCTCGGACCGGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCTGAGCAGGTGCCCATGGGACCAGCCGGCTGGTGACCGCTGGGCTTCCGGCTGCTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCTTCCCCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGATCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTGGGGGGAGTCCAGATC--------GCAGCCT---CCTTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGTGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA-----------------------CTCCCCTGGGCCGGCTCTGTCCCCAACCC------GAGACCTCCGCAAGGCCCCTTGCCCTCTGCCC--GTGAAGCAGGCCAGGATGAGTCCCCTCACGGGACTGTTGGGGAGGGTGTGGTG-----ACGAGGTAC-GCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAGGTTGGCAGAGACgaggggccagcgctgagcagtc--cccatgagcacggacca-ctttagaaccaggcccacagctgtgttcagggcacccagctcctctctgtggggccatgagcgggttacacactgctcagcctccaggccctccagttcaaaatggCCAGGGCGGTTAAGGTAACCTCAGGACCCCATTCGAGAAAGTTCCCGGCTAAGTGGGCGTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCAGTGCCTCAGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-GAGCTCatttcctcagtcaacgggtgtctgtgcagcacctactgagttccatcggtgttctcggctctggggatgaggcgatga--atgagacagccaagtcttagcttcatggagccagt-gggtggccgggcatagacagctcagtaagatgtccagtgtagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59965312 1246 + 64156825 CACACGAGGAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCCGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCGAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGGCCTGGTCACTGAATTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTTGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGCCCTGGGCCGGCTCTGTCCCCAGCCCC-----AACACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCC-GCCAGGATGAGTCCCCTCACGGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAAGTTAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCATGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCTGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTGAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTTGAGAAAGTTCCCGGCTAGGTGAGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--CCAAG-ACAGCAGC-GAGCTCatttgctcagtccgcggatgtctgtggagcacctactgagttccatcggtgttcccagctctggggatgaagcgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtctaatgtagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983209 1247 + 59248254 CACACAAGGAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCCAGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCGAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGGCCTGGTCACTGAATTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTTGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGCCCTGGGCCGGCTCTGTCCCCAGCCCC-----AACACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCCGGCCAGGATGAGTCCCCTCACGGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAAGTTAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCATGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCTGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTGAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTCGAGAAAGTTCCCGGCTAGGTGAGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--CTGAG-ACAGCAGC-GAGCTCatttgctcagtccgcggatgtctgtggagcacctactgagttccatcggtgttcccagctctgggaatgaagcgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtctaatgtagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47099129 1244 + 51301725 CACacgaggaaggaaggaatggccTCTTGACTC--AGCTCACAGAGCAGTGCTAGGACCCGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTGGGCTTCCAGCTGGCCGAGGGGGTGCCTCAGTGG-GTGGAGGGCAGGGCGTGGTCACTGAACTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGG-CAGacctgggtggggctggggaccGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGTCCTGGGCCGG--CTGTCCCCAGCCCC-----AAGACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCCGGCCAGGATGAGTCCCCTCACAGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAGGTCAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCGTGAGCACGCACCG-CTTTAGAACCAGGCCCACGGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCCGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTCAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTCAAGAAAGTTCCCGGCTAGGTGGGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CATGGGG--GCGAG-ACAGCAGC-GAGCTCATTTGCTCAGTCCGTGGATGTCTGTGGAGCACCTACTGAGTTCCATCGGTGTTCCCAGCTCTGGGGATGAAGCGATGA--ATGAGAGAGACAAGTCTTACCTTCAGGGAGCCAGT-GGGTGGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGT i papAnu2.chr19 C 0 T 39 s chlSab2.chr6 46806612 1238 + 50890351 CACACAAGTAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCTGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTAAGCAGGTACCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCAAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGACCTGGTCACTGAACTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGATCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACACTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGAAGCCCAGATC--------GCAGCCT---CTCTGTCCTCCCCACAGCGGACCCTGCAGAAACAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGCCGGCTCTGTCCCCAGCCCC-----GAGACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCAGGCCAGGATGAGTCCcctcacggggctgttgtggagggcgtggtg-----acgaggtat-tcagagga-cataga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGTGCTGAGCAGTC--CTCGTGAGCACAGACCG-CTTTAGAACCAGGCCCACGGCTGTGTCCAGGGCATCCAGTTCCTGTCTGTGGGGCCGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCCGTTCAGAATGGCCAGGGCGGTTAAGGTAACCTCAGG-------------AAGTTCCCGGCTAGGTGGGCTTGGATGTCACATGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATT-GTCGGAGCCTCAGTTTACCTACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--GCGAG-ACAGCAGC-GAGCTCATGTGCtcagtccgcggatgtctgtggagcacctactgacttccatcggtgttcccagctctggggatgaagtgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtccaatgtagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380422 1201 + 49145316 CACATGCATAAGGAA-----GGCCTCTCAACTCTGAGCTCACAGAGCAGCGCCGGGACCCAGCCCCTTTCAGGCTCCCCAGCATCCCCGGCTTGTAGGGGCCCCCAGGCCTCAGCTGGGCCGAGTGGGTACCCGAGCAGGTGCCCATGGGGCCAGCCAGCTGGTGACCGCGGGGCTTCTAGCTGGTGGAGGGGGTGCCTGAGTGG-CTGGAGGGCGGGGTCTGGTCCCTG-ACGGCAGGG-GCTTCCCTTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACACAGGTCAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGTGCC-GACCTGGGTGGGGCCAGGGACCGA--GGGACGCAAGGTAGGGTGAGCCCAGATA--------ACAGCCT---CCCTGTCCTTCCCACAGCGGACCCTGCAGAAGCAGAGCGTGGTATATGGCGGGAAGTCCACCATCCGCGACCGCTCGTCGGGCACGGCCTCCAGCGTGGCTTTCACCCCACTCCAGGTA----------------------CTTGCCCTGGGCCAGCTCTGTCCCCAGCCCC-----AAGATGCTGGCAAGGCCCCTTGCCCTCTGCCCctgtgaa-caggccacaatgagtccccttacagggctgtcacggggggtgtggtg-----a--agacat-gccaaagg-catcgg-cagcccctggcacacagcaagtgctcgaGGTTAGCAGAGACGAGAGGC----GCACAACAGTC--CTCATGAGCGGGGACCG------------------GGGCTACATCCCAGGGACCCTGTTTTTCTCTGTGGGGCCATGAACGGGTT--ACATTGCTCAGCCTCTAGGACCT-CAGTTTGAAATGGCTAGAGTGGTTAAGGTAACCTCAGGACCCCACTCGAAACAGTTCCCAGCTAGGTGGGCTTGGGTGTCACGTGTGGGTCTGGCCCCCAGCCCAGTCAGCAGTGAGTGGCTTGGAGCACGGCAGTCACCGCACC-ATCGGCACCGCGGTT----TGCCATCCACAGAGCAGGGCGAGCCTGCACCGTGGCT--GTGGG-ACAGTGGG-GAGCTCATCTGCTCAGACAGCGG-------------------------CTGTCGGtgctctcggctctgggggtgaagcggtga--atgagagagacaagtcttgccttcctggagcctgt-gggtggctgggcacagacagatcagtaagatgcccagtgtggt i calJac3.chr22 C 0 C 0 s mm10.chr7 3639388 999 + 145441459 CATACTGCTAAGGATG--ATGGACTCT--------GGCCAATAGGGTAG------------GCTCTTATTAGGTCACTTAAT-----------------GCTGCCAGTCC----CCTGGCTGA---------TGAGGTGGTGTCCATGAGACTGGCTGATTG----------GGTTCTCAGGTGAC--------TGCCTCAGGGGACTGGCTGGATGTACCCAGCTTCTTAACCGCAGGTTGCT--CTCGTCTCACCAGATTGAGGAGGATGCCTATCAGGAAGACCTGGGCTTTAGCCTGGGCCACTTGGGCAAGTCAGGCAGTGGGCGTGTGCGGCAGACCCAGGTGAATGAGGCCACCAAGGCCAGGATCTCCAAGACACTGCAGGTATGGATTGGGCCCA--TGAGAATGGGAGGCAGGTGGGATATGGAGGTCAGTGAGCCTGGATC--------CCAGCCT---CCCCTT--TCCCTACAGCGGACCTTACAGAAACAGAGCGTGGTGTATGGTGGGAAGTCAACAATTCGTGACCGCTCCTCAGGGACTGCCTCCAGTGTGGCCTTCACTCCACTCCAGGTA----------------------CC----------------------------------------------ATACCCTTT----TCTACC---------------------AGGCATATGATAAGGCTGCTGTGGAGATC----TG-----TTGAGATATAGCACATGAGCTTAGG-CATCCACAACCACACAGTAA------GTGCCTAACAG------TTGGCCA-----TGACAGTT--GTGACAAACTCAGACCAACTTTGGAACCAGGACTAGGATGCTGCCCACGTGATCCAGATACTCTCT---------------------GAACTTCCTAGTCTT---------TGTTTAAAAATAGTCCCG-TAGTCAGGATGCCATCAGG---------------------------GTGGGCTTGAGTATCACAG--------------CAG-CCCAGCGGCACTGAGCAGTGTGGAGCAGAATGG------------------CCTCAGGT----TACTTACCACAGAGATAGGCAAGTACGCCCCATAATGTCTCAAG-GAACCAAA-GAGCTCCCTAGCTTG--CCacaagtgcctactgagcacctgc------ccacca-tgttccaggctttgggcatagag--------acaaaagagacaagctttgcttttgtgggg--aga-aggttggggagcacagatgattgagtctagtacacaatgtatt i mm10.chr7 I 241 C 0 s canFam3.chr1 19603210 1094 - 122678785 TACATGAACACTCACAGCTT---CCCTCAACTGTCAGCTCAGGGAGCCGTAATAGGACTGGACTCCTCACTGGGCCCC--------------------------------------------AGCAGGCACCTGAATCGG------------------GTCAGTGCCTG--GGGCATCCGGCTGATGAAAG----------ATGG-CT----------------------AACTCTTGGTTACCTTCCCCTCCCACCAGATCGAGGAAGACGCCTACCAAGAGGACCTGGGCTTCAGCCTGGGCCATCTGGGCAAATCAGGCAGCGGGCGGGTACGGCAGACACAGGTGAACGAGGCCACCAAAGCCAGGATCTCTAAGACACTGCAGGTACAGGCGGGGCCTGAGTGGGCCTGGGAGTCTG--GGAGCTCCAG--CAGGAGAGCCCAAGCCAAGCCCAAACATCCTGTCCCCTCCCCTCCACACAGCGGACCCTGCAGAAGCAGAGTGTCGTGTATGGCGGGAAGTCCACCATCCGTGACCGCTCCTCGGGGACTGCTTCCAGTGTGGCTTTCACCCCTTTGCAGGTACTGTGCACCTgagtcaggaggcccagttctgggcaggctctactcccagctttctgagtggacctgggcaagcccctt-----------------------------------cctctcgcagggcTGTTGTGGACAGCCTTGTGTATCAGTGAAGCCC-CTGAAAGG-TACAGCTCAGTTCCTGGTGCTCAGGCT------AGTGGGAGCAGAAGGGAAAAG-------------GTCTGCCTGCAAGTGCAGGCTGGCTTTAGGATCGGGC------TGGGACTAGGGGTGACTACTGATTCCCCA--TGACCTCAAGTGGGCT----------CAGCTCCT---CCCTGAGGTGCTAAGTGGCTGGGAC---------AACCTCAGGGCTCCACGGAAGAAAACTCAAAGGTAG------CTGGCTGGGAAGCAGAGGTCCCAGCC-CAG-CCACTCA----TGCACAGGACAGAGC--------CTCTGCATCTGTCCATTTCTCAGCC----TAC---CCACAGA-TAGCGCCAGCACGCCCCATAGCA--TCGAGTAGAATAACTGAGTTCATTGGCAACAtcagcaagggtgtactgagcaccta--agtttcaggtgctgttgcaggcactggggatagagccacaagcacaagacag-caagccttgccctcagggagcttgtggggtggcaggggtcaga--------taagatatggagcctggt i canFam3.chr1 C 0 C 0 a score=6561.000000 s hg38.chr19_GL949748v2_alt 104534 9 + 1064304 agaaggcag s panTro4.chr19 59038047 9 + 63644993 agaaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916157 9 + 60714840 aaaaggcgc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45381623 9 + 49145316 aaaaggcag i calJac3.chr22 C 0 C 0 s mm10.chr7 3640387 9 + 145441459 agaagacac i mm10.chr7 C 0 C 0 s canFam3.chr1 19604304 9 - 122678785 ggaaagtgg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100373 39 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=2755.000000 s hg38.chr19_GL949748v2_alt 104543 8 + 1064304 -aaatgcca s panTro4.chr19 59038056 8 + 63644993 -aaatgcca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45381632 8 + 49145316 -aaatacca i calJac3.chr22 C 0 C 0 s mm10.chr7 3640396 8 + 145441459 -aggtgcca i mm10.chr7 C 0 C 0 s canFam3.chr1 19604313 8 - 122678785 aaagtgca- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100373 39 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=3000.000000 s hg38.chr19_GL949748v2_alt 104551 2 + 1064304 GG s panTro4.chr19 59038064 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 2 + 51301725 GG i papAnu2.chr19 T 39 C 0 s calJac3.chr22 45381640 2 + 49145316 gg i calJac3.chr22 C 0 I 489 s mm10.chr7 3640404 2 + 145441459 gg i mm10.chr7 C 0 I 5 s canFam3.chr1 19604321 2 - 122678785 gg i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=5928.000000 s hg38.chr19_GL949748v2_alt 104553 14 + 1064304 CCGGGCGCAGACAG s panTro4.chr19 59038066 14 + 63644993 CCGGGCGCAGACAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 14 + 51301725 CCGGGCACAGACAG i papAnu2.chr19 C 0 C 0 s mm10.chr7 3640411 14 + 145441459 gcaggcgtggacgg i mm10.chr7 I 5 I 50 s canFam3.chr1 19604323 8 - 122678785 ------gaagaaag i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=9882.000000 s hg38.chr19_GL949748v2_alt 104567 42 + 1064304 CTCAGTAAGATGTCCAGTGTAGGAGAAGGCA-GAAATGCCAGG s panTro4.chr19 59038080 42 + 63644993 CTCAGTAAGATGTCCAGTGTAGGAGAAGGCA-GAAATGCCAGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100350 42 + 51301725 CTCAGTAGGATGTCCAATGTAGTAGAAGGCG-GAAATgtcagg i papAnu2.chr19 C 0 T 56 s canFam3.chr1 19604331 23 - 122678785 --------------------gggagagggagtgaggcatcggg i canFam3.chr1 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=14949.000000 s hg38.chr19_GL949748v2_alt 104609 54 + 1064304 ------CTGGGCGCAGACAGCTCAGTAAGATGTCCAG-------TGTAGGAGAAGGCAGAAA---TGCCA s panTro4.chr19 59038122 54 + 63644993 ------CCGGGCACAGACAGCTCAGTAAGATGTCCAG-------TGTAGGAGAAGGCAGAAA---TGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 54 + 51301725 ------CCGGGCACAGACAGCTCAGTAGGATGTCCAA-------TGTAGTAGAAGGCGGAAA---Tgtca i papAnu2.chr19 T 56 T 56 s canFam3.chr1 19604354 70 - 122678785 ttggacccgcccagggaggcctcagcaagaaggtcagaattacctgtggaagatactgggaatggtgcca i canFam3.chr1 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=9107.000000 s hg38.chr19_GL949748v2_alt 104663 30 + 1064304 GGCCGGGCGCAGACAGCTCAGTAAGATGTC s panTro4.chr19 59038176 30 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGCC i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 30 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTC i papAnu2.chr19 T 56 C 0 s canFam3.chr1 19604424 30 - 122678785 gCCAGTGTGGAGCCCCCACAGCTGGACGCC i canFam3.chr1 C 0 I 288 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=6244.000000 s hg38.chr19_GL949748v2_alt 104693 26 + 1064304 CAGTGTAGGAGAAGGCAGAAATGCCA s panTro4.chr19 59038206 26 + 63644993 CAGTGTAGTAGAAGGCAGAAATGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100364 26 + 51301725 CAATGTAGTAGAAGGCGGAAATgtca i papAnu2.chr19 C 0 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=14450.000000 s hg38.chr19_GL949748v2_alt 104719 56 + 1064304 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCA s panTro4.chr19 59038232 56 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 56 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtca i papAnu2.chr19 T 56 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=15050.000000 s hg38.chr19_GL949748v2_alt 104775 58 + 1064304 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGG s panTro4.chr19 59038288 58 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 58 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtcagg i papAnu2.chr19 T 56 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=13935.000000 s hg38.chr19_GL949748v2_alt 104833 56 + 1064304 CTGGGCGCAGACAGCTCAGTAAGATGCCCAGTGTAGTAGAAGGCAGAAATGCCAgg s panTro4.chr19 59038346 56 + 63644993 CCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAgg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 56 + 51301725 CCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtcagg i papAnu2.chr19 T 56 T 19 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=26492.000000 s hg38.chr19_GL949748v2_alt 104889 292 + 1064304 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaacttagccgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagccagactctgtctcaaaaaaaaaaaaa s panTro4.chr19 59038402 292 + 63644993 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaatacaaaaacttagccgggcgtggtggcgggtgcctgtagtcccagctacttgggaggctgtggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacagggccagactccatctcaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100392 19 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=17014.000000 s hg38.chr19_GL949748v2_alt 105181 9 + 1064304 agaaggcag s panTro4.chr19 59038694 9 + 63644993 agaaggcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102680791 9 - 106955855 agaaggcgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966558 9 + 64156825 agaaggcgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984456 9 + 59248254 agaaggcgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100373 9 + 51301725 AGAAGGCGG i papAnu2.chr19 T 19 C 0 s chlSab2.chr6 46807850 9 + 50890351 agaaggcgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I a score=516860.000000 s hg38.chr19_GL949748v2_alt 105190 211 + 1064304 aaaTGCCagggaggggaggaggtggaaggtaggaggtgggaCAGGGGAGGCTCTCGTTTCGGAGCAGCCAGGGAGGGCCTCTTTGAGAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCaggactgaaaagaacgcacaggaagcacttggcactgggctcaccattagagcccaatgactgggt s panTro4.chr19 59038703 211 + 63644993 aaaTGCCAGGGAGGGGAGGAGGTGGAAGGTAGGAGGTGGGACAGGGGAGGCTCTTGTTTTGGAGCAGCCAGGGAGGGCCTCTTTGAAAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCAGGACTGAAAAGAACGCACAGGAAGCACTTGGCACTGGGCTCACCATTAGAGCCCAATGACTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916166 211 + 60714840 aaatgccagggaggggaggaggtggaaggtagggggtgggacaggggagactctcgttttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCTATGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTTACCATTAGAGCCCGATGACTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102680800 210 - 106955855 aaatgccagggagggga-gaggtggaaggtaggaggtgggacaggggaggctctcgttttggagcagccagggagggcctctttgagaagatgaGGCCGGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCACCATGAGGTGCTCAGGACTGAAAAGAATGCGCAGGAAGCACTTCGCACTGGGCTCACCATCAGAGCCCGATGACTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966567 209 + 64156825 aaatgccagggaggggaggaggtgggaggtaggaggtgggac--gggggactctcgttttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCCGTGCCTTTCCAAGCCCCCCCTCCTCCGCCATGAGGTGCTCGGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTAGGCTCACCACTGGAGCCCGATGACTGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984465 209 + 59248254 aaatgccagggaggggaggaggtgggaggtaggaggtgggac--gggggactctcattttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCCGTGCCTTTCCAAGCCTCCCCTCCTCCGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCAATGACTGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100382 209 + 51301725 AAATgtcagggaggggaggaggtgggaggtaggaggtgggac--ggggagCTCTCGTTTTGGAGCAGCCAGGGAGGGCCTCTTTGAGAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCTGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCGATGACTGGgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46807859 209 + 50890351 aaatgccagggaggggaggaggtgggaggcaggaggtgggac--ggggggctctcgttctggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCTGTGCCCTTCCAAGCCTCCCCTCCTCCGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCGATGACTGGGT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e calJac3.chr22 45381642 489 + 49145316 I a score=241281.000000 s hg38.chr19_GL949748v2_alt 105401 85 + 1064304 cctgttatt--------ATTTTTAGAGACGGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATTGC s panTro4.chr19 59038914 85 + 63644993 CCTGTTACT--------ATTTTTAGAGACGGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916377 85 + 60714840 CCTGTTATT--------ATTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCGGCCAGGTGTTGGCTCCCATTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681010 83 - 106955855 CCTGTTAGT--------ATTTTTAGAGAC--GGGCTCACTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966776 87 + 64156825 CCTGTTATT------TTTTTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCGCCCATCGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984674 87 + 59248254 CCTGTTATT------TTTTTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCGCCCATCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100591 93 + 51301725 cctgttatttatttattttttttagagacaggggcttgctctgtt------gccttgAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808068 89 + 50890351 CCTGTTATT----TTTTTTTTTTAGAGACAGGGGCTTGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382131 94 + 49145316 ccTGttatt-----attttctttagagacagagtctcgctctgttgcccaggcCTTGAAAATATTTAGGAAGTTCCAGCCAGGTGCCGGCGTCTATCGC i calJac3.chr22 I 489 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I a score=302873.000000 s hg38.chr19_GL949748v2_alt 105486 92 + 1064304 TG-CCACTATGATCGTCAGTGGTGTTGGTGTGATTTGtgctaggacctcgggccagccatgtcccccagggactcagtttccttatgcagaaa s panTro4.chr19 59038999 92 + 63644993 TG-CCACTATGATCGTCAGTGGTGTTGGTGTGATTTGTGCTAGgacctcgggccagccatgtcccccagggactcagtttccttatgcagaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916462 91 + 60714840 TG--CACTATGATCGTCAGTGGTGTTGGTGTGATTTGTGCTAGgacctcgggccagccatgtcccccagggactcagtttcctcatgcagaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681093 93 - 106955855 TGGCCACTGTGATCGTCAGTGGTGTTGGTGTGATCTGCGCTGGGACCTCCGGCCAGCCATGTCCCCCAGGGACTCAGTTTCTGCATGCAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966863 93 + 64156825 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGTGCtgggacctcgggccagccacgtcccccagggactcagtttcctcatgcagaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984761 93 + 59248254 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGtgctgggacctcgggccagccacatcccccagggactcagtttcctcatgcagaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100684 93 + 51301725 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGTGCTGGGACCTCGGGCCAGCCACGTCCCCcagggactcagtttcctcatgcaGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808157 93 + 50890351 TGGCCACTGTGATTGTCGGTGGTGGTGGTGTGATTTGTGCtgggacctcgggccagccacgtcccccagggactcagtttcctcatgcagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382225 93 + 49145316 TGGACACTGTGATCATCAGTAGTGTTGGTGTGATTTGTGCtgggacctccagccagccacatcccccagagactcagtttcctcatccagaaa i calJac3.chr22 C 0 C 0 s mm10.chr7 3640475 87 + 145441459 tg-ccagcattgtcatcactgtcatgggtgggattt--gcaggaaaCT--GGCTGGCCATATCCCTCTGGGATTCAGTTTCCTTATCCAG-AA i mm10.chr7 I 50 C 0 e canFam3.chr1 19604454 288 - 122678785 I a score=3417376.000000 s hg38.chr19_GL949748v2_alt 105578 1025 + 1064304 ctgggcaggattggctgtcctcaagcattggttgtttttagca-cccctgaggaacttcgtacaaatccaggcgccctggttcctccccaccct---ctccctctagacccactgagtcagaatctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCA-CCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTTATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCC-AGTCCTTCTGAAG-GGCT-AGGATCG--------GGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGTCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTT-----TTTTAACTGAGAAAGGAGA---TTTTTTGAAAAGAGTACAATTAAAAGG-ACATTGTCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCCGGGGCAACTAGAAGAATCAGAGCTGTGGAGCTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAGCCGCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCA-ACAGCCGCAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgcacagaaagcactta s panTro4.chr19 59039091 1028 + 63644993 cggggcaggattggctgtcctcaagcattgg-tgtttttagcaccccctgaggaacttcatacaaatctaggcgccctggttcctccccaccct---ctccctccagacccactgagtcagaatctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCA-CCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTTATGTCTACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCC-AGTCCTTCTGAAG-GGCT-GGGATCG--------GGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGTCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTT-----TTTTAACTGAGAAAGGAGATACTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTGTCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCCGGGGCAACTAGAAGAATCAGAGCTGTGGAGCTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAACCGCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCA-ACAGCCACAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCCTACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgcgcagaaagcactta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916553 1035 + 60714840 cggcgcaggattggctgtcctcaagcattggtggtttttagcaccccctgaggaacttcatacaaatctaggcgccctggttcctccccaccct---ctccctccagacccactgagtcagaatctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGCGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCAGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCT-AGTCCTTCTGAAG-GGCT-GGGATTG--------GGTTCTGGCAGGGAGAA----------CCTACCCTGCCACCGGCCCCAGTGCTGAGACTGCCTAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCGGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGAAACTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTGTGGAGTTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGTGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAACCTCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCG-ACAGCCACAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgtgcagaaagcactta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681186 1027 - 106955855 CTGGGCAGGATTGGCTgtcctcaagcattggttgtttttagcaccccctgaagaacttcatacaaatctaggcaccctggttcctccctacc-----ttccctccagacccatggagtcagaatctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCACGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTTTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATC-------------CTCTCCCTCACCTGCCCAGGGCTTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCATGCGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCT-AGTCCTTCTGAAG-GGCT-GGGATCG--------GGTTCTGGCAGTGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGATGGGCCCAGCCTCCCCCAGGACCGAGATCACTG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGATACTTTTTTG--AAGAGTACAATTAAAAGG-ACATTATCAAGGTCTGTCCTTGGAGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAGACCC------TCTCC--------AACCCCCTGGAGAACCTCAGTCACTTTGATAGCA--AA-------------TTATGTGGCTGCCG-ACGGCCGCAGA--TCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCACGTG----CCCAGGAC--TGCAAAGAACGCACAGAAAGCACTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966956 1040 + 64156825 ctgggcaggattggctgttctcaagcgtcggttgtttttagca-cccctgaggaacttcatacaaatctaggcgccctggttcctccccagcct---cttccccgagacccactgagtcagaacctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATTGGGGCTGGCGGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGCTCCAGGAGGTGTCTAGGCGCGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGTCCTGGACAACCTCAGTCACTTCGATAGCA--AA-------------CGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAGCCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCGCACCTA------CGCCCAGGGG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984854 1040 + 59248254 ctgggcaggattggctgttctcaagcgtcggttgtttttagca-cccctgaggaacttcatacaaatctaggtgccctggttcctccccagcct---cttccccgagacccactgagtcagaacctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATTGGGGCTGGCGGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGCTCCAGGCGGTGTCTAGGCGCGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGTCGTGGACAACCTCAGTCACTTCGATAGCA--AA-------------CGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAGCCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCACACCTA------CGCCCAGGGG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100777 1037 + 51301725 CTGGGCAGGATTGGCTGTTCTCAAGCGTCGGTTGTTTTTAGCA-CCCCCGAGGAACTTCGTACAAATCTAGGCGCCCTGGTTCCTCCCCAGCCT---CTCCCCCGAGACCCACTGAGTCAGAACCTCCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCACGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCGCAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCTAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATGGGGGCTGGGGGTTCTGACAGGGAGAG----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATgccttgtctgttttattttaactgaGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATGTGTTCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGGTCCAAGTGGTGTCTAGGCGTGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGCCCTGGACAACCT--GTCACTTCGATAG-A--AA-------------TGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAAGCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCACACCTA------CGCCTAGGAG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808250 1041 + 50890351 ctgggcaggattggctgttctcaagcgtcGGTTGTTTTTAGCA-CCCCTGAGCAACTTCGTACAAATCTAGGTGCCCTGGTTCCTCCCCAGCCT---CTCCCCCGAGACCCACTGAGTCAGAACCTCCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCACGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAGCCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCGAGGTGGCTTCCCACTGAAGGGACACAGAGGCCCAAGTCCTTCTGAAG-GACT-GGGATCGGGGCTGGGGGTTCTGGCAGGGAGAA----------CCTGTCCTACCACTGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCAGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGGTCCAAGCGGTGTCTAGGCGCACTCCCTTCCCCGTTACTTTCTCGTCGTGGGATCCCAGAAGGAAAAA-GCC------TCTCC--------AGTGCCCTGGACAACCTCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGTGCAGGCCAGCCGGGATTGCTGCGGCACCTCAGGCCAGCCACCTCGCCTTTGCAAGTCTCCACACCTA------CGCCTAGGTG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382318 991 + 49145316 ctgagcaggattggCTGTCCTCAGGCACTGG-TGTTTttagcagcccctggggaacttgttaaaaacctaggtgccctggtttctccccaccct---ctccccccagacccactgaggcagaatcttccaaggc--------agggcGACTCCAGGGACTGGCAAACTGTCCCATGCCCACCCAAGGCCTGAGTACCACGGGGAAAGGCCTGGGGGGCTCTGGCGTGT--CAGTT---------------GGGGCCT---TCTCCTTGCCCAACACATCATCC-----------TCTCTCCCTCACCTGCCTAGGGCCTGGAGATTGTGAACCCACAGGCCGCGGAGAAGAAGGTGGCTGAGGCCAATCAGAAGTATTTCTCCAGCATGGCAGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCTACCTGAATGATAGCGTGTGCCCAACGTGGCTTCCCACTGAAGGGACGTTGAAGTCC-AGGCCTTCTGAAG-GGCT-GGGATGGGGGTTAGGGGTTGTGGCAGGGAGAG----------CCTTCCCTGCCGCCCA-CCCGGTGCTCGA-CTGCCCAGGGAGG-GGCCTCGGAAGAAGCCTGGCCCGGCCTCCTCCAGGACGGAGCTCACCG---CCCTGGAT---GGGTTAGAGCAGGTCT---TCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGATACTTTTTTGAAGAGAGTGCAATTAAAAAGCACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAATAGTCAGAGCTTCGGAGTTTG--GGGAAAAGAGCTTCGCCTCCGG----------------GGCTCACTCCCTCCCCTGTTCCTTTCTCA------------------------------------CC--------AACCCCCTGGAGAACCTCAGTCGCTTTGATAGCA--GA-------------CGGTGTGGCAGCCG-ACACCTGAAGATCTCAGCGCAGGCTGACCAAGGTTGCGCTGGCACCTCAGGCCGGTTGCCTCGCCTTTCCGAGCCTCCACAGCTA------CGCCCAGGCG----CCCAGGGC--TGgaaagaacgcgcagaaagcactta i calJac3.chr22 C 0 C 0 s mm10.chr7 3640562 964 + 145441459 CCAGGCAGGAGTGG------------------TGATTTTAACATCACCTGAGGAGATTAACA-----------GTCCTGACATCT----AAGAC---CTACCCCAACACCCACTGTGTCAAAAATCTCCCAAAC------TGAGGGAGACTTCAGGGACT-GTAAATGGTTCCATGTCCA--CAAG------------------AGTGTCTGGGAGACTCTGACATGTC-TGGTTCTCAT-CTAG--AGGGAGGCCTGAGCTTCCCAACTTCACCTGTCACC-------------CTCTTCCTTTCCAACCCAGGGTCTAGAGATTGTGAACCCACAAGCAGCCGAGAAGAAGGTGGCAGAGGCCAACCAGAAGTATTTCTCTAGCATGGCCGAGTTCCTCAAGGTCAAGGGTGAGAAAAGTGGCACCATGTCTACCTGAAGGA--GCCCGCACTCCAGGTGACCATCCACTGAAAGGACATAAAGGACT-GGAGCTTCTGAAGTGACA-GATATCCAGCCAGGAAGTTGTGGTGTGGTGGAGGCAGCCTTCCATGCTTTGCCTTTGGCCCAAGGCCATAG-CATCCAAGAAAAAGGAT----GAAG-AACCTTAGCCTGCCTCCCCCAGCATCCATGCTGCTGCTTCCCTAAAC---GGGCAGAA--AGGTCTTCCTCACA-CTCAGCTTTTTTACTTACAGGGGGAAAGGCAGTGCTTTTATAGAACGAGTACAATTAAATGT-GTAGTGTCGGGCTCTGAACAGAGGGTGTGAGTGATTATGAAA---------GAACCAAAGGACTCAGAGCTGTGGGGCTTCCAGTGTGAGCAGCAT-------GGACCCA----------------GCTCTCTTCTGC-------TCTTATCCTGGAATCT----AAGAAAAA-CCCTGTCTATCTCT--------AACACCATCACCTGCCCCA-------TGAGAACATCAG-------------CATCATGGCCACCACAAAACTCCAGGACCCAACAAGACCCA--CAGGGTTGTTGT---CCCTCAGGCTAGACACCTTGGTCCAAGAAACATCCACACAAAATGAAGCACGTAAAAG----CC-----T--TGGAAAGTGTGTACAGAAAGCACCCA i mm10.chr7 C 0 I 2427 s canFam3.chr1 19604742 1028 - 122678785 ctgagccacctgggctgccc---AACATTGA-TGCTTttaaaattgcttagagaacttgataaaaattcagatgcccaggt-cctccccaCTCTTCCCTCTTCCCAGAGCCAC--AGTTAGAATCTCCCCAGGTTTGGGGTGGGGGCAA-TTTGGTAATTGGAAAACTGTTCTAT---CACCTGGAGCCCG-GAACCATTGAAAAGGGCCT------CCCCGACATGTCACAATTCTCTTACTGGGTAAGGGGGCCT---TGTCAGGGGCCAGCCCATCTCCCCACCCCATCATTACCTCATTCACCTGCCCAGGGCCTAGAGATTGTGAACCCACAAGCAGCTGAGAAGAAGGTGGCTGAAGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGGGCGAGAAAAGCGGCATCATGTCCACCTGAGGGGC----TGTACCCTGGGTGGCTGCCC-CTGAAGCTACAC--AGGCCC-TGCCCTTCTGAAG-GGATCAGGATCA--------GGATAGGGCTGGGAGGT----------TCTGTCCT-----CAG-CCCAGTGCCAGGACTGTCCAGGAA---GACTCAGGAGG-AGACC-------CAGTCCCCACGCACGAGATCGCTC---CCTATTGCAGGGGGGCAGAGCCAGTCTTCATCATGCCTCACCTT-----TTTTAACTAGGAAGGAAGATACTTT--TGGAAAAAGTACGATTAAAAAGCACATTATCAAGTTCCGTTCCTGGGGAGTGATCATTTGTCAAACACATGCG-TGACTGGAGGAGTCAGAGCTGTGCGGGTTTGGGGGCACAGAGCTT-------------------------GGGCCCTTCCCTGGCCTTTCACTTCCCTGTGATGGACCCCAGGAAGAGAAAAGCCT------TCTCTATGTCCAAACCTCCTTGGAGAACGTAAGT---TCTGACACTC--AAGTTCTGACACTTCTGATGTGGCTACTG-AAAGCCCTGGCTTTGAAAACTTGCCAACCTGGGTGGCTGT--GATGTCAGGGGAGTGGCCATGCCTTTCCAGGCCTCCACCCTGA------ACACTACGGGGTCACCCATGACCATGTGAGACATGCTCGGGAGGTGCTTA i canFam3.chr1 I 288 C 0 a score=58637.000000 s hg38.chr19_GL949748v2_alt 106603 28 + 1064304 gcatgggacttgccatcagcgccctata s panTro4.chr19 59040119 28 + 63644993 gcatgggacttgccatcagcgccctata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917588 28 + 60714840 gcatgggacttgccatcagcgctttata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682213 28 - 106955855 GCATGGGACTcgccatcagcgcccaata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59967996 22 + 64156825 GCATG------GCCATCAGCGCCCAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54985894 22 + 59248254 GCATG------GCCATCAGCGCCCAATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47101814 22 + 51301725 GCATG------GCCATCAGCGCCCAATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809291 22 + 50890351 GCATG------GCCATCAGCGCCCAATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383309 27 + 49145316 gcacagggctcg-cgtcagcacccaata i calJac3.chr22 C 0 C 0 s canFam3.chr1 19605770 28 - 122678785 GTGTTGGGCTCCCCGACAGGGTCCAGTA i canFam3.chr1 C 0 I 94 e mm10.chr7 3641526 2427 + 145441459 I a score=444647.000000 s hg38.chr19_GL949748v2_alt 106631 184 + 1064304 accaggtcctgttatGATTGGG--ttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatga-agctcactaaagcctcaaactcctgg------gctgggattacaggcatgaaccagcacagctggcctcctggttaatttaaa----------tttttt-ttttttttctgaggtggagtctcgct s panTro4.chr19 59040147 185 + 63644993 accaggtcctgttatGATTGGG--ttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatga-agctcactacagcctcaaactcctgg------gctgggattacaggcgtgaaccagcacagctggcctcctggttaatttaca---t------tttttt-ttttttttctgaggtggagtctcgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917616 190 + 60714840 accaggtcctgttattACTGGGttttttttagagacagggtctctgttgcccaggttggagtacagtgatgcgatca-agctcactacagcctcaaactcctgg------gctgggattacaggcatgaaccactgcaactggcctcctggttaatttaaatttt------tttttt-ttttttttctgaggtggagtctcact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682241 186 - 106955855 accaggtcttgttagtgttgggttttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatcatagctcgctacagcctcaaactcctgg------gctaggattacaggcatgaaccggcacacctggcctcctggttaatttaa-----------tttttt-tttttttcctgaggtggagtctggct i nomLeu3.chr10 C 0 I 3 s rheMac3.chr19 59968018 193 + 64156825 ACCAGGTCCTGTTGTTACTGGt-tttttccagagacggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaa---ctgg------gctGGGATTACAGGCACGAAGCTCCACAGCTGGCCTCCTGGTTAATGTAACAttttttgtgtgtttg-gtttttttctgaggtggagtctcgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54985916 193 + 59248254 ACCAGGTCCTGTTGTTACTGGt-tttttccagagacggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaa---ctgg------gctgggattacaggcatgaagcaccacagctggccTCCTGGTTAATTTAACAttttttgtgtgtttg-gtttttttctgaggtggagtctcgct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47101836 196 + 51301725 ACCAGGTCCTGTTGTTACTGGT-TTTTTCCAGAGAcggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaactcctgg------gctgggattataggcatgaaccaccgcagcTGGCCTCCTGGTGAATTtaacattttgtgtgtgtttg-ttttttttctgaggtggagtctcgct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809313 197 + 50890351 ACCAGGTCCTGttgttactgtt-tttttccagagacggggtctccgttgcccaggttggagtacggtgatgcaatcatagctcactacagcctcaaactcctgg------gctgggattacaggcatgaaccaccgcacctggcctcctggttaatttaacattttttgtgtgtttgtttttttttctgaggtggagtctcgct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383336 174 + 49145316 actgggtcctgtt---actGGT-Gttttttagagatgaggcctctgtcgcccaggctggagtacagtgatgtaatcatagctcactacggcctcaaactcctggtttcaagctgggattacagacgcatgccacag--------ttcctggttaat-----------------tttg-aaactttttatagatggggtcgcact i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I a score=2800.000000 s hg38.chr19_GL949748v2_alt 106815 1 + 1064304 c s panTro4.chr19 59040332 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917806 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968211 1 + 64156825 c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986109 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102032 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809510 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383510 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=306169.000000 s hg38.chr19_GL949748v2_alt 106816 169 + 1064304 tgttgcccaggctagagtacagtggtgcaatcttggctcactgcaacctctacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgtcccgctaatttttatagtttttagtagagacagggtttcgccatg s panTro4.chr19 59040333 169 + 63644993 tgtcgcccaggctagagtacagtggtgcaatcttggctcactgcaacctctacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccacatcccactaatttttatagtttttagtagagacagggtttcgccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917807 169 + 60714840 tgtcacccagactagagtacagtggtgcaatcttggctcactgcaacctctacctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccacgccccactaatttttatagtttttagtagagacagggtttcgccatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968212 169 + 64156825 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagaaacggggtttcaccatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986110 169 + 59248254 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagaaacggggtttcaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102033 169 + 51301725 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcaattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagagacggggtttcaccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809511 169 + 50890351 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagagacggggtttcaccatg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e calJac3.chr22 45383511 0 + 49145316 C e nomLeu3.chr10 102682427 3 - 106955855 I a score=28994.000000 s hg38.chr19_GL949748v2_alt 106985 12 + 1064304 ttggtcaggctg s panTro4.chr19 59040502 12 + 63644993 ttggtcaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917976 12 + 60714840 ttggtcaggctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968381 12 + 64156825 ttggtcaggctg i rheMac3.chr19 C 0 I 367 s macFas5.chr19 54986279 12 + 59248254 ttggtcaggctg i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47102202 12 + 51301725 ttggtcaggctg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46809680 12 + 50890351 ttggtcaggctg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45383511 12 + 49145316 ttacccaggctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=-265.000000 s hg38.chr19_GL949748v2_alt 106997 1 + 1064304 t s panTro4.chr19 59040514 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917988 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45383523 1 + 49145316 g i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I e chlSab2.chr6 46809692 1 + 50890351 I e papAnu2.chr19 47102214 1 + 51301725 I e macFas5.chr19 54986291 1 + 59248254 I e rheMac3.chr19 59968393 367 + 64156825 I a score=26094.000000 s hg38.chr19_GL949748v2_alt 106998 13 + 1064304 tctcgaactcctg s panTro4.chr19 59040515 13 + 63644993 tctcaaactcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917989 13 + 60714840 tctcgaactcctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968760 13 + 64156825 Tcttgaactcctc i rheMac3.chr19 I 367 C 0 s macFas5.chr19 54986292 13 + 59248254 tcttgaactcctg i macFas5.chr19 I 1 I 483 s papAnu2.chr19 47102215 13 + 51301725 tctcgaactcctc i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46809693 13 + 50890351 tcttgaactcctc i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45383524 13 + 49145316 gcttgaacttctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=748703.000000 s hg38.chr19_GL949748v2_alt 107011 419 + 1064304 acctca--tgatatgcccacctcagcctcccaaagtgccaggattacaggtgtgagccaccac-cccagcc-----ccatttttaaattgtttat-------agacagggtcgtgctctattacccaggctggg-------------------------cttgaactcctgtgctcaagtgagctttccacctcagcctccctaagtgttgagattacaggcttgagccgc-------tgtg-------tctggcctcttattatt-----------attattatttttttttttgagacagaatctcactc-tgttgcccaggctggagtgcagtgggatgatcctggctcatggcaacctccacctcccgggtccaggtgattctcctgcctcagtctcctgagtagctgggattacaggcgcccatgggttttgtttgtttg---tttgtttgtttgttt-gtttttcagacggagtcttgctctg s panTro4.chr19 59040528 407 + 63644993 acctca--tgatatgcccacctcagtctcccaaagtgccaggattacaggtgtgagccaccac-cccagcc-----ccatttttaaattgtttat-------agacagggtcgtgctctgttacccaggctggg-------------------------cttgaactcctgtgctcaagtgacctttccacctcagcctccctaagtgttgagattacaggcttgagccgc-------tgtg-------tctggcctcttattatt-----------attattttttttttttttgagacagaatctcactc-tgttgcccaggctggagtgcagtgggatgatcctgactcatggcaacctccacctcccgggtccaggtgattctcctgcctcagtctcctgagtagctgggattacaggcgcccatgggt---------------tttgtttgtttgttt-gtttttcagacggagtcttgctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918002 397 + 60714840 acctca--tgatatgcccacctcagcctctcaaagtgccaggattacaggcgtgagccaccac-cccagcc-----ccatttttaaatcgtttat-------agacagggtcgtgctctattacccaggctggg-------------------------cttgaactcctgtgctcaagtgacctttccacctcagcctccctaagtgttaaggttacaggcttgagccac-------tgtg-------tctggccTCTTACTAtt------------ttttgtttattctttttgagacagagtctcactc-tgtt--ccaggctggagtgcagtggcataatcctggctcatggaaa---ccacctcccgggtccaggtgattctcctgccttagtctcctgagtagctgggattacaggcgcccatgggt-------------------tttgtttgttt-gtttttcagacggagtcttgctctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968773 412 + 64156825 acctca--tgatctgcccacctcattctcccaaagtgccgagatgacaggtgtgcgccaccac-cctggcc-----ccatttttaaattgtttat-------agacagggttgggctgtattgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtgttgacattacaggcttgagcctc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttttgagacagagtcttactc-tgttgcccaggctggagtgcagtggtgtgatctcagctgacagcaacctctacct-ccgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcgcccaccacc-------aaacc---tttgggtttttcttc-ttttttgagacggagtcttgctccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986788 413 + 59248254 acctca--tgatcttcccacctcagcctcccaaagtgctgagatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgtttat-------agacagggttgggctgtattgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtgttgacattacaggcttgagcctc-------tgtg-------tctggcctcttattatt----------ttttattcatttattttttgagacagagtcttactc-tgttgcccaggctggagtgcagtggtgtgatcccagctgacagcaacctctacctcccgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcgcccaccacc-------aaacc---tttgggtttttcttc-ttttttgagacggagtcttgctccg i macFas5.chr19 I 483 C 0 s papAnu2.chr19 47102228 414 + 51301725 acctca--tgatctgcccacctcagcctcccaaagtgccgggatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgtttat-------agaCAGGGTtgtgctgtattgcccaggctggg-------------------------cttgaactcctgcgcCCAAGTGacccttctacctcagcctccctaagtgttgacattacaggcttgagcttc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttgtgagacagagtcttactc-tgttgcccaggctggagtgcagtggtatgatcccagctgacagcaacctccacctcctgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcacccaccacc-------aaact---tttgggtttttcttctttttttgagacggagtcttgctccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809706 413 + 50890351 acctca--tgatctgcccacctcagcctcccaaagtgccaggatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgcttat-------agacagggttgtgctgtatcgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtattgacattacaggcttgagccgc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttttgagacagagttttactc-tgttgcccagactggagtgcagtggtgtgatcccagctgacagcaacctccacctcccgggtccagttgattctcctgcctcagtctcctgaatagctgggattacaagcgcccaccact-------aaact---tttgggtttttcttc-ttttttgagacggagtcttgctccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383537 479 + 49145316 tgctcaagtgatccttccacctcagcctccctaagtgttgagattacaggcttcagccactgcgtctagccTCTTACTATAttttatttattcatgtttttgagatggagtctcactctgtcgcccaggctggagtgtgtgatttcagttcactgtgacctccacctcccaggtccaagtgattctcttgcctcagcctcttgggtagctgggat--caggcacctaccaccaAATTTTGTGGGGGTTTTTTGGTTGTTTGTTTTTTGAGACAGAGTCTCAttctttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggctcaatctcggctcactgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccacc-------atgcccagctaatttttgtattt-ttagtagagacggtgtttcaccttg i calJac3.chr22 C 0 I 108 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=347375.000000 s hg38.chr19_GL949748v2_alt 107430 161 + 1064304 tcacccaggctggagtgcaatgacatggtcttggctcactgcaaactccgcctcccaggttgaagtgattctcctgcctcagcctcccgaatagctgggattacaggcgcccgccaccacgcctggctaatttt-gta-tttttagcagagacggggtttcac s panTro4.chr19 59040935 161 + 63644993 ttacccaggctggagtgcaatgacgtggtctcggctcactgcaaactccgcctcccaggttgaagtgattctcctgcctcagcctcccgaatagctgggattacaggcgcccgccaccacgcctggctaatttt-gta-tttttagcagagacgggatttcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918399 161 + 60714840 tcacccaggctggagtgcaatgacatggtcttggctcactgcaaactccgcctcccgggttgaagtgattctcctgcctcagcctccagaatagctgggattacaggcacccaccaccacgcctggctaatttt-gta-tttttaacaaagacggggtttcac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59969185 162 + 64156825 tcacccaggctggagtgcagtggcgtggtcttggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcctgccaccacgcatggctaatttt-gtattttttatcagagacggggttttac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987201 161 + 59248254 tcacccaggctggagtgcagtggcgtggtcttggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcctgccaccacgcatggctaatttt-gta-tttttatcagagacggggttttac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102642 161 + 51301725 tcacccaggctggagtgcagtggcgtggtctcggctcactgcaagctccgcctcctgggttcacgccgttctcctgcctcagcctcccaaatagctgggactgcaggcgcccgccaccacgcatggctaatttt-gta-tttttatcagagacggagttttac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810119 161 + 50890351 tcgcccaggctggagtgcagtggcgtggtctcggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcccgccaccacgcatggctaatttt-gta-tttttatcagagatggggttttac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45384124 161 + 49145316 ttgcccaggttacagtgcagtggcgagatctcagctcactgcaacctgtacctcccaggttcaagccattctgctgcctcagcctccccagtagct-ggactagaggtgcctgccagcatgcctggctaattttggta-tttttagtagaggtggagttttac i calJac3.chr22 I 108 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=258690.000000 s hg38.chr19_GL949748v2_alt 107591 96 + 1064304 catttgggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgacccaccgcgcccg s panTro4.chr19 59041096 96 + 63644993 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgacccaccgcgccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918560 96 + 60714840 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgcgacccaccgcgccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682430 96 - 106955855 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctg i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 59969347 96 + 64156825 catgttgccccggctgctctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987362 96 + 59248254 catgttgcccaggctgatctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102803 96 + 51301725 catgttgcccaggctgatctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagctacggTGCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810280 96 + 50890351 catgttgcccaggctgatctccaactgctgacttc--atgatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45384285 98 + 49145316 catattggccgggctggtcttgaacttctgacctcaaatgatctgtgtgcctcggtctcccaaagtgctagggttgctggtgttagccaccgcacctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I a score=222472.000000 s hg38.chr19_GL949748v2_alt 107687 92 + 1064304 gccgagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataa----tccgcctgcctcgtctcccaaagtgctgggatt s panTro4.chr19 59041192 96 + 63644993 gccgagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataatctgtctgcctgccttgcctcccaaagtgctgggatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918656 92 + 60714840 gccaagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataa----tccgcctgcctcgcctcccaaagtgctgggatt i ponAbe2.chr19 C 0 M 1526 s nomLeu3.chr10 102682526 92 - 106955855 gccgagatggggttttaccacgttggccaggctggtctcgaactcctgacctcaaataa----tccacctgcctcgcctcccaaagtgctgggatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969443 92 + 64156825 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaagaa----tctgcctgcttcgcctcgcaaagtgctgggatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987458 92 + 59248254 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaagaa----tctgcctgcttcgcctggcaaagtgctgggatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102899 92 + 51301725 Gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaataa----tctgcctgcttcgcctcgcaaagtgctgggatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810376 92 + 50890351 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaataa----tctgcctgcttcgcctcgcaaagtgctgggatt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e calJac3.chr22 45384383 0 + 49145316 C a score=22645.000000 s hg38.chr19_GL949748v2_alt 107779 13 + 1064304 acCCTGTGCCTGG s panTro4.chr19 59041288 13 + 63644993 acCCTGTGCCTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102682618 13 - 106955855 acCCTGTGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969535 13 + 64156825 acGCTGTGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987550 13 + 59248254 acGCTGTGCCCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102991 13 + 51301725 acactgtgcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810468 13 + 50890351 acaCTGTGCCTGG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45384383 0 + 49145316 C a score=1060010.000000 s hg38.chr19_GL949748v2_alt 107792 504 + 1064304 CCCAGCCTCTTATTTATAACCAGTGTTGAGGGACTGTGTGGAG-CCGGGCACAGGCGAAGCAGGCAGGCTTCCTGCCCTGGTAGGACCTGGTTGCTATAAAAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAGTCACTGAGTCTCGGGAACCGGGGCTCGGCCAGGAGCGCCTTTACTTGGACTGAGGGGAATGTGGCCTGCAGACAGTCAGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTGTCCTAGCGGGTGGCATGAAACC---GTCTCCCTGGAGAGGTTAAGGAAGAGCAACTCCAGGGGTTCCATTTACTATGTGCTCCGGAGCTGGGCTACACGGTGGTACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------GGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCTCCAGGTCTCTACCTCCTCTCTCTCTCCCTCCTT--CTCTCCA s panTro4.chr19 59041301 504 + 63644993 CCCAGCCTCTTATTTATAACCAGTGTTGAGGGACTGTGTGGAG-CCGGGCACAGGCGAAGCAGGCAGGCTTCCTGCCCTGGTAGGACCTGGTTGCTATAAAAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAGTCACTGAGTCTTGGGAACCGGGGCTCGGCCAGGAGCACCTTTACTTGGACTGAGGGGAATGTGGCCTGCAGACAGTCAGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTATCCTAGCAGGTGGCATGAAACC---GTCTCCCTGGAGAGGTTAAGGAAGAGCAACTCCAGGGGTTCCATTTACTCTGTGCTCCAGAGCTGGGCTTCACGGTGGTACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------AGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCTCCAGGTCTCTACCTcctctctctctccctcctt--ctctcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102682631 502 - 106955855 CCCAGCCTCTTATTTATAACCAGCTTTGGGGGGCTGTGTGGAG-CCGGGCACAGGTGAAGCAGGCAGGCTCCCTGCCCTGGTAGGACCTGGTTGCTATGACAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAATCACTGAGTCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTTCTTGGGCTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTGTCCTAGCGGGTGGCATGAAACC---GTCTCCCTGGAGAGGTCATGGAAGAGCAACTCCAGGGCTTCCATTTACTCTGTGCTCCAGAGCTGGGCTTCACGGTGGCACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------GGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCCCCAGGTCTCCACCTC--ccctctctccctccct--ctctcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969548 505 + 64156825 CCCAGTCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACGTCCCCTC---CCCTGACCTCCAGTCGTTGAATCTTGGGAACTGGGGCTTGGCCAGGGGCACCTTTACTTGGGTTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGTGAGGGGACGGCAGGGGCTGTCCTATCGGGCAGCATGAAACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCAGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTAAGACATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGACGATGCCTCCT--TCTCCACCTTccctccctctccctccctccctctcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987563 505 + 59248254 CCCAGTCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACGTCCCCTC---CCCTGACCTCCAGTCATTGAATCTTGGGAACTGGGGCTTGGCCAGGGGCACCTTTACTTGGGTTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGTGAGGGGACGGCAGGGGCTGTCCTATCGGGCAGCATGAAACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACGGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGACGATGCCTCCT--TCTCCACCTTCCCTCCCTCTCCCTCCCTCCCTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103004 494 + 51301725 cccggtCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACTTccccccccGCCCCGACCTCCAGTCACTGAATCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTACTTGGGCTGAGGGGAACGTGGCCTGCAGATAGTCGGGAGAA--TTTCCAGGCGAGGGGACAGCAGGGGCTGTCCTATCGGGTGGCATGATACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTATGAGGTC--------GGCTTC-GTTAGTTACCTATGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGA--ACGatgcctccc--tct------------ctccaccttccctccctctcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810481 504 + 50890351 CCCGGTCTCTTATTTATAACCAGTTTTGAGGGACTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCCTC--CCCCGACCTCCAGTCATTGAGTCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTACTTGGGCTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGCGAGGGGACGGCAGGGGCTGTCCTATCGGGTGGCATGAAACC---ATCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTGAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGcctccc--tctccacctcccctctctctccctccct--cTTTCCA i chlSab2.chr6 C 0 I 129 s calJac3.chr22 45384383 499 + 49145316 cccAGCCTC--ATTTATAACCAGTGTGAAGCGGCTGTGTGCAGCCCTGGCAAAGGGAAAGCGGGCAGGCTCCCTGCCCTGGTAGGACCTGGTTGCTGTGAAAGCTGCTGCCAGGTGAGCAGCAGGAGCAC-------------ACCCGCCCTCCAGTCATGGAGTCTTGGTAACCGGGGCTCGGCCAGGGACACCTTTACTTGAGCTGAGGGGACTGTGGCCTGCAGACAGTCGGGAAAGGCTTTCCAGGAGAGGAGACAGCAGGGGCTGTCCTAGTGGGTGGCAGGAAACCGTGGTCTCCCTGGAAAGGTTAAGGAAGAGCAGCTCAAGGGGTTCCACTTACTCTGTGCTCCGGAGCTGGGCTTCACAGTGGTACTAAGGAGGCC---CTCGTCACCTGAGCTATGAGGTCCAGGTCGGGGCGTCTGTTAGTTACCTAAGGCATGTTACCAGGGCAGGCAGCAGCCCTGGTGGCAAGATGATGCCTCCACGTCTCCACCT----------TCCCTCTCT--CTCTCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M a score=134224.000000 s hg38.chr19_GL949748v2_alt 108296 131 + 1064304 CCT------CCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCTCT----CTTCCTCCCTCTCCACCTCCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCT------------------------CTCCCTCCCTCTCTCCACCTCCCCTCTCTCTC s panTro4.chr19 59041805 155 + 63644993 cct------cccctctctccccctccctctctccacctcccctctctct----cttcctccctctccacctcccctctctctcttcttccctctccacctcccctctctctccctccctctctccacctccccctccctccctctctccacctcccctctctccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683133 112 - 106955855 ccttcctcccctctctccctcccttcttctctccacctcccctct-----------------------------ctctccctccctccctctctccacctcccctctct------------------------ctccctcactctctccacctaccctctctccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59970053 123 + 64156825 cct------cccctctccctcc------ctctccacctcccctctgtca----ccctccatctctccacctcccccctctctccctcc--ctctccacctcccctctgt------------------------caccctccatctctccacctcccctctctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988068 131 + 59248254 CCT------CCCCTCTCTCACCCTCCATCTCTCCACCTCCCCTCTCTCC----ACCTCCATCTCTCCACCTCCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCT------------------------CACCCTCCATCTCTCCACCTCCCCTCTCTCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103498 125 + 51301725 cct------cccctctctctccctccctctctccacctcccctctctcaccctccctccctctctccacctcccctctctcaccctccctctctccatctt----------------------------------ccctccctctctccacctcccctctctcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45384882 112 + 49145316 --------CCTTTCCACAATTTCTCCCTCTTTCCATTTTCcctctctct----------------------accttccctctcccttcctctctacaccttccctctcc-----------------------ccaccacccctctccccaccttccctctccCTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e chlSab2.chr6 46810985 129 + 50890351 I a score=629.000000 s hg38.chr19_GL949748v2_alt 108427 6 + 1064304 -TCCCTC s panTro4.chr19 59041960 6 + 63644993 -tccctc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59970176 4 + 64156825 ---tccc i rheMac3.chr19 C 0 M 2760 s macFas5.chr19 54988199 4 + 59248254 ---CCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103623 4 + 51301725 ---cctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45384994 7 + 49145316 TCTACTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I a score=3964.000000 s hg38.chr19_GL949748v2_alt 108433 5 + 1064304 CCTCT s panTro4.chr19 59041966 5 + 63644993 cctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988203 5 + 59248254 CATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103627 5 + 51301725 cctct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45385001 5 + 49145316 CCTCT i calJac3.chr22 C 0 M 968 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=36823.000000 s hg38.chr19_GL949748v2_alt 108438 125 + 1064304 CTCCACCTCCCCT----------GTCTCCACCTCCCCTCC-----CTCTGTCCCTCCCTCTCTCCACCT-CCCCTCCCTCTGTCC-----------CTCCCTCTCTCCACCTCCCCTCTCT--CTCCCTCCCTCTCTCCACCTCCCCTCTCTCT s panTro4.chr19 59041971 153 + 63644993 ctccacctaccctccctccctccgtctccaccttccctcctctctctccctccctccctctctcccacc-tccctccctctctccatctcccctctctccctctctccagctcccctctctccctccctccctctctccacctcccctctctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988208 104 + 59248254 CTCCACCTCCCCTCTCT--------------------------------CACCCTCCATCTCTCCACCT-CCCCTCTCTCCCT---------------CCCTCTCTCCACCTCCCCTCTCT--CACCCTCCATCTCTCCACCTCCCCTCTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103632 137 + 51301725 ctccaccttccctccctctctcgg--tccaccttcc---------ctcgctccctccctctccccacctgcccctccctccctct----ccccacctcccctttccccacttcccctctct--caccctccctcgctccacctcccctctctct i papAnu2.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=7770.000000 s hg38.chr19_GL949748v2_alt 108563 18 + 1064304 CTTCCTCCCTCTCCACCT s panTro4.chr19 59042124 14 + 63644993 ----cgctctctccacct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988312 18 + 59248254 CCCTCCCTCTCTCCACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103769 18 + 51301725 gcctccctctctccacct i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19605892 18 - 122678785 CCTCCTACCTCTGCCCAT i canFam3.chr1 I 94 C 0 e mm10.chr7 3641526 2427 + 145441459 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=10926.000000 s hg38.chr19_GL949748v2_alt 108581 38 + 1064304 CCCCTCTCTCTCTTCCTCCCTCTCCACCTCCC--CTCTCT s panTro4.chr19 59042138 32 + 63644993 cccctctccct--------ctctccacctcccctctctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988330 38 + 59248254 CCCCTCTCTCACCCTCCATCTCTCCACCTCCC--CTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103787 36 + 51301725 ctcctctct--ccctctctctctccagctccc--ctctct i papAnu2.chr19 C 0 I 2 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=15564.000000 s hg38.chr19_GL949748v2_alt 108619 98 + 1064304 CCCTCCCTCTCTCCACCTCCCCTG----------TCTCCACCTCCCCTCCCTCTGTCCCTCCCTCTCTCCACCTCCCCTCTCTCTGTCCCTCCCTCTCTCCACCTCCC s panTro4.chr19 59042170 102 + 63644993 ccctctctctctccacctcccctctcttcctccttctccacctcccctctctc--tccctccctctctccacctcccctctc----tccctccctctctccacctccc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47103825 76 + 51301725 ccctccctctctccagctcccctc----------tct------------------cacctccctctccccacctcccctctc----tccttccctctcctcacaTCCC i papAnu2.chr19 I 2 I 143 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=-93.000000 s hg38.chr19_GL949748v2_alt 108717 9 + 1064304 C-------TCTCTCTG s panTro4.chr19 59042272 16 + 63644993 ccccaccttccctctc i panTro4.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=8774.000000 s hg38.chr19_GL949748v2_alt 108726 36 + 1064304 TCCCTCCCTCTCTCCACCTCCCCTCTCTCTCCCTCC s panTro4.chr19 59042288 36 + 63644993 tctctccctccctctacctcccctctccctccctcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683245 36 - 106955855 tccctccctctctccACCTTCCCTCTCTCTCCCTCA i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=5304.000000 s hg38.chr19_GL949748v2_alt 108762 16 + 1064304 CTCTCTCCACCTCCCC s panTro4.chr19 59042324 15 + 63644993 ctctctccacctacc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683281 16 - 106955855 CTCTCTCCACCTCCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54988368 16 + 59248254 CACCCTCCATCTCTCC i macFas5.chr19 C 0 I 4 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=7000.000000 s hg38.chr19_GL949748v2_alt 108778 32 + 1064304 TCTCTCTCCCTCCCTCTCTCCAC-----CTCCCCTCT s panTro4.chr19 59042339 36 + 63644993 -ctccctccctccctctctccaccttcactcccctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683297 32 - 106955855 TCTCTCTCCCTCTCTCTCTCCAC-----CTACCCTCT i nomLeu3.chr10 C 0 M 619 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=4684.000000 s hg38.chr19_GL949748v2_alt 108810 64 + 1064304 CTCTGTCCCTCCCTCTCTCCACCTCCCCTCT------CTCTCTCCCTCCCTC--TCCACCTCCCCTCTCTCC s panTro4.chr19 59042375 72 + 63644993 ctccctccctccctctctccaccttccctctccccacctctctccctccctctgtccacctcccctctctcc i panTro4.chr19 C 0 I 483 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=6999.000000 s hg38.chr19_GL949748v2_alt 108874 96 + 1064304 ACCTCCCCTCACTCCACCTTCCCTCTCTCTCCCTC--TCTCTCCTCCCCTCTCCCTCCCTCC----ACCTCCCCTCCCTCTCTCCACCTCCCCTCCCTCTCT s panTro4.chr19 59042930 101 + 63644993 ccctccc-tctctccacctcccctctccctccctccctctctcctcccctctccctccctccctccacctcccctccctctctccacctcccctccttctct i panTro4.chr19 I 483 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=16285.000000 s hg38.chr19_GL949748v2_alt 108970 100 + 1064304 CCCTCCCTCCCTCCCTCTCTCCACCTTCCCTCT----CCCTCCCTCCACCTTCCCTCT----CCCTCCCTCCACCTTCCCTCTCCCTCCCTC--TCCACCTTCCCTCTCT s panTro4.chr19 59043031 75 + 63644993 ccctccctccctctctc-----------------------------caccttccctct----ccctccctccaccttccctctccctccctc--tccaccttccctctct i panTro4.chr19 C 0 C 0 s chlSab2.chr6 46811114 110 + 50890351 CCCTCTCTCCCTCCCTCTCTTCACCTTCCCTCTCTCCCTCTCTCTCCACCTTCCCTCTCTCCCTCTCTCTCCAGCTCCCCTCTCCCTCTTTCTGTCCACCTTCCCTCTCT i chlSab2.chr6 I 129 I 11 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=9422.000000 s hg38.chr19_GL949748v2_alt 109070 27 + 1064304 CCTCCCCTCTCCCTCCCTCTCTCCACC s panTro4.chr19 59043106 17 + 63644993 cc----------ctccctctctccacc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973000 27 + 64156825 cctcccctcaccctccctctctccacc i rheMac3.chr19 M 2760 I 5 s chlSab2.chr6 46811235 27 + 50890351 TCCCCTCTCTCCCTCCCTCTCTCCACC i chlSab2.chr6 I 11 I 5 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I a score=3760.000000 s hg38.chr19_GL949748v2_alt 109097 6 + 1064304 TCCCCT s panTro4.chr19 59043123 6 + 63644993 tcccct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973032 6 + 64156825 tctccc i rheMac3.chr19 I 5 C 0 s papAnu2.chr19 47104044 6 + 51301725 tcttct i papAnu2.chr19 I 143 C 0 s chlSab2.chr6 46811267 6 + 50890351 TCTCCC i chlSab2.chr6 I 5 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e macFas5.chr19 54988384 4 + 59248254 I a score=27227.000000 s hg38.chr19_GL949748v2_alt 109103 42 + 1064304 CTCTCCCTCCCTCCC----TCCCTC----TCTCCACCTTCCCTCTCTCCC s panTro4.chr19 59043129 45 + 63644993 ctctccctccctccc----tccctccctctctccacctatcctctctcc- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973038 42 + 64156825 cacctcccctcaccc----tccctc----tctccacctcccctctctctc i rheMac3.chr19 C 0 I 17 s papAnu2.chr19 47104050 41 + 51301725 ttctttctctctccc----tccctg----tctccaccttccctctctcc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811273 46 + 50890351 CACCTCCCCTCTCTCACCGTCCCTC----TCTCCACCTCCCTTCTCTCTC i chlSab2.chr6 C 0 I 17 s calJac3.chr22 45385976 36 + 49145316 ctcaccttcccttcc----tatctc----tctctaccttttctc------ i calJac3.chr22 M 968 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683329 619 - 106955855 M e macFas5.chr19 54988384 4 + 59248254 I a score=6780.000000 s hg38.chr19_GL949748v2_alt 109145 9 + 1064304 TCCCTCTCT s rheMac3.chr19 59973097 9 + 64156825 tccctctct i rheMac3.chr19 I 17 C 0 s macFas5.chr19 54988388 9 + 59248254 TCCCTCTCT i macFas5.chr19 I 4 C 0 s chlSab2.chr6 46811336 9 + 50890351 TCCCTCTCT i chlSab2.chr6 I 17 C 0 s calJac3.chr22 45386012 7 + 49145316 --catctct i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47104091 0 + 51301725 C e panTro4.chr19 59043174 0 + 63644993 C a score=31992.000000 s hg38.chr19_GL949748v2_alt 109154 23 + 1064304 CCACCTTCCCTCTCTCTCTCTCC s panTro4.chr19 59043174 12 + 63644993 ------tccc-----ctctctcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683948 21 - 106955855 ccaccttccc--tctctctctcc i nomLeu3.chr10 M 619 C 0 s rheMac3.chr19 59973106 21 + 64156825 ccacctcccc--tcactctctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988397 21 + 59248254 CCACCTCCCC--TCACTCTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104091 19 + 51301725 --acctcccc--tctctctctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811345 21 + 50890351 CCACCTCCCC--TCTCTCTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386019 20 + 49145316 ccgccttccc--tctctctccc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M a score=311701.000000 s hg38.chr19_GL949748v2_alt 109177 126 + 1064304 CTCCCTCTCTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCTGTGTATCTCTGGATCCCTG-- s panTro4.chr19 59043186 126 + 63644993 ctccctctctccAGCTCATGCTATCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCTCTCTGGGCCTCCCTGTCACCACTCTGTGTATCTCTGGATCCCTG-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683969 126 - 106955855 ctccctctctccAGCTCATGCTTTCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCGTTCTGGGCCTCCCCGTCACCACTCTGTGTGTCTCTGGATCCCTG-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973127 126 + 64156825 ctccctctTTCCAGCTTATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTGCCCTCTCTGGGCCTCCCCGTCACCACTCTCTGTATCTCTGGATCCCTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988418 126 + 59248254 CTCCCTCTTTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCACTCTATCTCTGGATCCCTG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104110 126 + 51301725 ctccctctttccagcTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGagattttgct--ctttttgttcccctctctgggcctccctgTCACCACTCTCTGTATCTCTGGATCCCTG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811366 126 + 50890351 CTCCCTCTTTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCTCTGTATCTCTGGATCCCTG-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386039 116 + 49145316 ---------tccgcctcatgctatctgggtctccctctGA-TTTCTAGGTCCTGTTTGAGATTTTGCT--GTTTCTATTCCCCTCTCTGGGCCTCCCTGTCACCACTCTGTGCATCTCTGGATCCCTG-- i calJac3.chr22 C 0 I 4 s canFam3.chr1 19605910 118 - 122678785 CTCCTGCCCTGCAGTTCACACTTTCT--------CTCTGGGGCTCTGG---CTGTCCGAGATCTATCTCCCTCTCTTTTCCTCTTTCTGGGCTGCCCT-CCACCCCCCACTGTCATACTTGCTCTGAGTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e ponAbe2.chr19 55918748 1526 + 60714840 M a score=1716115.000000 s hg38.chr19_GL949748v2_alt 109303 559 + 1064304 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TAAATCTCTCTCCTTCCTCAAGTCAAAAAGTCGACA-CACTCAGGAGGTTCCCTTGAGTGGCTGAACTACCCCAGGTTGTATAACTCAAGTCTGTTTTCTCAA--TGTTATCCCTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAACCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTCAATCTCAGGAAAGGAATCTTGAGTCGCCTGGGCCTGCAGCCCT----CGTACTTTCAGAAcagaggttctcagaatttaatgcgcttcagaattacactgag-gacttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtacgtgcctgacccaaggccacatttcagaagcactgCTCTAGAAAA s panTro4.chr19 59043312 559 + 63644993 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TAAATCTCTCTCCTTCCTAAAGTCAAAAAGTTGACA-CACCCAGGAGGTTCCCTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCTCAA--TGTTATCCGTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAAGTTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAACCCTGTTCAGAATCCCCCATCTCCCTTGGCCGAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAAAGGAATCTCGAGTCGCCTGGGTCTGCAGCCCT----AGTACTTTCAGAAcagaggttctcaaaatttaatacgcttcagaattacactgag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtatgtgcctgacccaaggccacatttcagaagcactgCTCTAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920282 560 + 60714840 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAGTTGGCAATCTC-TAAATCTCTCTCCTTCCTCAAGTCAAAAAGTCGACA-CACCCAGGAGGTTCCTTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCTCAA--TTTTATCCCTGACCCTGTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCATGGTCCACAATCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAAAGGAATCTTGAGTCACCTGGGCCTGCAGCCCT----AGTAGTCTCAGAAcagaggttctcaaaatttaatacgcttcagaattacactgag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtacgcgcctgacccaaggccacatttcagaagcactgCTGTAGCAAA i ponAbe2.chr19 M 1526 C 0 s nomLeu3.chr10 102684095 555 - 106955855 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TGAA--TCTCTCCTTCCTCAAGTCAAAAAGTTGACA-CACCCAGGAGGTTCCTTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCCCAA--TTTTATCCCTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAGCCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCATGAGGGCGTGAATCTCAGGAAAGGAATCTTGAGTCACCTGGGCCTGCAGCCCT----AGTGCTCTAAGAAcagaggttctcaaaatttaatacgcttcagaattacaccaag-ggcttgttaaaa-catagttgctaggcccagagtttctgattc----agtctagggtggg-gctcaaaaatctgcctttcaaacaagttcccaggtgatgggtatgcgcctgacccaaggccacattgcagaagcactgCTCTAGAA-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973253 550 + 64156825 TCCTTCATCCCAGAGCTCTGTCCCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCACAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTT----TGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGTTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTGTGTTCAGAATCTCTCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAGTCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccgag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcatttcaaacaagttcccaggtgataggtatgcgcctgatccaaggccgcattggagaagccctgCTCTAGAA-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988544 552 + 59248254 TCCTTCATCCCAGAGCTCTGTCTCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCGCAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTT----TGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTGTGTTCAGAATCTCTCATCTCCCTCGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAGTCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccgag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcatttcaaacaagttcccaggtgataggtatgcgcctgatccaaggccgcatcggagaagccctgCTCTAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104236 555 + 51301725 TCCTTCATCCCAAAGCTCTGTCTCAGGACCTCAG-TGGCAATCTCTTgagtctctctcttccctcaagTCAAAAAGTCGACA-CCCCTGGGAGCTTCCTTTGAGTGGGCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTCTGTTCAGAATCCCCCGTCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAATCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAACAGAGGTTCTCCAAATTTAATACGCTTCAGAATCACAccgag-ggcttgttaaaa-cacagttGCTGggcccagagtttctgattc----agtctaGGGTGGG-GCTCAAAGATGTGCATTTcaaacaagttcccaggtgataggTATGCGCCTGATCCAAGGCCGCACTGGAGAAGCCCTGCTCTAGAA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811492 555 + 50890351 TCCTTCATCCCAGAGCTCTGTCTCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCGCAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTATGAGTGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTCTGTTCAGAATCTCCCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGGGGGTGTGAATCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----AGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccaag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcattt-aaacaagttcccaggccataggtctgcgcctgatccaaggcctcatttgcgaagccctgCTCTAGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386159 539 + 49145316 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGACAATCTC-TGAATTTCTCTCCTCCCTCAAGTCAAAAAGTCATCA-TACCTGGGAGGCTCCTCTGAGTGGCCGAACTACCCCAGGATGCATAACTGAAGTCTGTTTCCTCAA--TTGTATCCCTGACCCTCTGAGTCAACCCCGTTTGGAAATGACAGC-------------------CTGGTCTGCCAGGGAAGGACTGGTGGTCCACAACACTGTTCAGAATCCCCCATCTCCCTCGGCCAAAATATCTGGCATCTACCAGTGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAGAGGAATCT-GAGTCACGTGGCCCTGCGGCCCT----AGTGTGCTCAGAAcagaggttctcaaaatttaatacgcttcagaattctacagag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcatttcaaacaagtttccaggtgatgggtatgtggctgatacaaggccacatttgagaaGCTTTGCTCTAGAAAA i calJac3.chr22 I 4 C 0 s canFam3.chr1 19606028 494 - 122678785 TGTCTCAGTTCAGGGCTCACTCTGGGGACCTCAG-CAGC--TCTT-TGAACCTCTCCCCTCACATTAG------AGTCTCCATCACCTGGGAGATTCCTTCTAATGGCCAAATTACCCCAGGTCACGTCACT------TGGTTTCTCCAACTTTTATCCCTGAGCCTTTAGATCAGCCCTGTTGGAAAGTTAAAAACTTGGCTGATTGCTG---ATGAGTCTGCT--GGAAGGGTGCTCTGCCCGCTACTC--TTCACAACCTTCA--CCCACTTGTCCGGAG--------------------------------------------TCAAGAAAGG-ATCT-GACTCCTCTGGTGCTGCAGTCCTGCGAAGTCT--------Tagagattctcaaagcttaatatacttcag-attacccagggtggcttgttaaaaccaaggttgcagagtccagagtttctgcttccattggtctagggtgggaactcaaaagtgtggatttctagtaagttcccaggtgatgtttaggctgctgat-tgagacctcactggagaaccactgCCCTAGAAAA i canFam3.chr1 C 0 I 136 e mm10.chr7 3641526 2427 + 145441459 I a score=1500.000000 s hg38.chr19_GL949748v2_alt 109862 1 + 1064304 G s panTro4.chr19 59043871 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920842 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54989096 1 + 59248254 G i macFas5.chr19 C 0 M 10062 s chlSab2.chr6 46812047 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386698 1 + 49145316 G i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e nomLeu3.chr10 102684650 0 - 106955855 C e papAnu2.chr19 47104791 0 + 51301725 C e rheMac3.chr19 59973803 0 + 64156825 C a score=172945.000000 s hg38.chr19_GL949748v2_alt 109863 94 + 1064304 AAGACTCTGTAAGCGGCTCTTACgctgggcgcg-----gtggctcacgcctgtaatcccagctacttgggaggctgaggtgggagaatggcttgaacct s panTro4.chr19 59043872 94 + 63644993 AAGACTCTGTAAGTGGCTCTTATgctgggcgtg-----gtggctcacgcctgtaatcccagctacttggtaggctgaggcgggagaatggcttgaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920843 94 + 60714840 AAGACTCTGTAAGTGGCTCTTACAccgggcgcg-----gtggctcacgcctgtaatcccagctacttgggaggctgaggcgggagaatcacttgaaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102684650 98 - 106955855 AAGACTCTGTAAGTGGCTC-TACGCCGGGCGCGTAAGTGTCTCTcacgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973803 93 + 64156825 AAGGCTCTGTAAGTGGCTCTCACGCT-GTcgcg-----gtggctcacgcatgtagtcccagctccttggcaggctgaggtaggagaatctcttgaatct i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47104791 93 + 51301725 AAGTCTCTGTAAGTGGCTCTCacgct-ggcgcg-----gtggctcacgcatgtagtcccagctccttgggaggctgaggtaggagaatcacttgaatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812048 90 + 50890351 ---TCTCTGTAAGTGGCTCTCACGCT-ggcgcg-----gtggctcatgcacgtagtcccagctccttgggaggctgaggtaggagaatcacttgaatct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386699 86 + 49145316 -------TATAAGTGGCCCTTAggccaggtgca-----gtggcgcatgcctgtaatcctagctactcaggaggctgagacaggagaatcgcttgaacc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e macFas5.chr19 54989097 10062 + 59248254 M a score=80451.000000 s hg38.chr19_GL949748v2_alt 109957 53 + 1064304 gggaggcagaggttgcagtgagccgagatggcgcccctgcactccagcctggg s panTro4.chr19 59043966 53 + 63644993 gggaggcagaggttgcagtgagccgagatggccccactgcactccagcatggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684748 53 - 106955855 gggaggcagaggttgcagtgagccgagatggcgccattgcactccagcctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973896 44 + 64156825 gggag--------tgcagtgagccgagat-gcgccactgctctctagcctggg i rheMac3.chr19 C 0 I 47 s papAnu2.chr19 47104884 53 + 51301725 gggaggtggaggttgcagtgagccgagatggcaccactgctctccagcctggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812138 53 + 50890351 gggaggcagaggttgcagtgagccgagatggcgccgctgctctccagcctggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386785 53 + 49145316 ggaaggcagaggtggcagtgaaccaagattgcgccactgcactccagcctgga i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M a score=528.000000 s hg38.chr19_GL949748v2_alt 110010 11 + 1064304 t-----gagagagACA s panTro4.chr19 59044019 11 + 63644993 t-----gagagagACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684801 15 - 106955855 tg-acagagagagact i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47104937 9 + 51301725 -------agacagaca i papAnu2.chr19 C 0 I 38 s chlSab2.chr6 46812191 9 + 50890351 -------agacaCACA i chlSab2.chr6 C 0 I 20 s calJac3.chr22 45386838 15 + 49145316 -ccacagagtgagact i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59973940 47 + 64156825 I a score=9341.000000 s hg38.chr19_GL949748v2_alt 110021 6 + 1064304 CTGGCT s panTro4.chr19 59044030 6 + 63644993 CTGGCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684816 6 - 106955855 ccgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973987 6 + 64156825 CTGGCT i rheMac3.chr19 I 47 C 0 s papAnu2.chr19 47104984 6 + 51301725 CTGGCT i papAnu2.chr19 I 38 C 0 s chlSab2.chr6 46812220 6 + 50890351 ctggct i chlSab2.chr6 I 20 C 0 s calJac3.chr22 45386853 6 + 49145316 ctgtct i calJac3.chr22 C 0 I 1589 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M a score=3000.000000 s hg38.chr19_GL949748v2_alt 110027 2 + 1064304 CC s panTro4.chr19 59044036 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684822 2 - 106955855 cc i nomLeu3.chr10 C 0 M 1644 s rheMac3.chr19 59973993 2 + 64156825 CC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47104990 2 + 51301725 CC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812226 2 + 50890351 cc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e macFas5.chr19 54989097 10062 + 59248254 M a score=48332.000000 s hg38.chr19_GL949748v2_alt 110029 68 + 1064304 CACCTCAAGATCGTTTTAGTTGGTCCAGTGTAAGCCTGGGTATCTGGACttttttattttttattttt s panTro4.chr19 59044038 68 + 63644993 CACCTCGAGATTGTTTTAGTTGGTCCAGTGTAAGCCTGGGTATCTGGACttttttattttttattttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973995 68 + 64156825 CACCTTGAGATTGTTTTAGTTGGTCTAGTGCAAGCCTGGCTATCTGGACTTCTTTTTTTTTTTTTTTT i rheMac3.chr19 C 0 I 558 s papAnu2.chr19 47104992 64 + 51301725 TACCTCGAGATTGTTTTAGTTGGTCTAGTGCAAGCCTGGCTATCTggacttcactttttttttt---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812228 65 + 50890351 cacctcgagattgttttagttggtctagtgcaagcctggctatctggacttCAtttttttttttt--- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e macFas5.chr19 54989097 10062 + 59248254 M a score=121488.000000 s hg38.chr19_GL949748v2_alt 110097 270 + 1064304 attttttgagacggcgtcttgctctgtcacccaggctggagtgcaatggcgcaatctcgggtcactgcaacctctgcctcccaggttcaagtgattctcccgcctcagcctcccgagtagctgggattacaggcacatgccaccatgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccctacctcaggtgatccgcccacctcggcctctgagagtgctgggattacaggtg s panTro4.chr19 59044106 270 + 63644993 tatttttgagacggcatcttgctctgtcacccaggctggagtgcaatggcgcaatctcgggtcactgcaatctctgcctcccgggttcaagtgattctcccgcctcagccctccgagtagctgggattacaggcgcctgccaccatgcccagctaattttcgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatcctcccacctcggcctctgagagtgctgggattacaggtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47105056 270 + 51301725 tttttttgagacgtagtcttgctctgtcacccaggctggggtgcagtggcacgatctcggctcactgcaacctccacctctcgagttcaagcaattcttgtgcctcaggttcccgagtagctgggattataagcgtgcgccatcacgcccggctaatttttgtaattttagtagacatggggtttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacaggcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812293 266 + 50890351 --ttttgggtacgtagtcttg--ctgtcacccaggctggagtgcagtggcacgatctcggctcacggcaacctccacctctcgagttcaagcgattctcatgcctcaggttcccgagcagctgggattacaagcgtgcgccatcacgcccggctaatttttgtacttttagtagacacggggtttcaccctgttggccaggctggtctcgaactcctggcctcaggtgatccgcccgcctcggcctcccaaagtgctgggattgcaggcg i chlSab2.chr6 C 0 I 70 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=340.000000 s hg38.chr19_GL949748v2_alt 110367 3 + 1064304 caa s panTro4.chr19 59044376 3 + 63644993 caa i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47105326 3 + 51301725 tga i papAnu2.chr19 C 0 I 73 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=9366.000000 s hg38.chr19_GL949748v2_alt 110370 117 + 1064304 tggcgcaatctaggctcactgcagcctctgcctcccgggttcaagtgattctcccggcccggcctGGCCTCTAATTTAAAAAAAATTTTTTTTTTTTAAA-GTTCCTCAGGTAggcca s panTro4.chr19 59044379 118 + 63644993 tggcgcaatctaggctcactgcagcctctgcctcccgggttcaagtgattctcctggcccggccCAGCGTCtaattaaaaaaaaaagttttttttttaaaaGTTCCTCAGGTAggccg i panTro4.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e papAnu2.chr19 47105329 73 + 51301725 I e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=2234.000000 s hg38.chr19_GL949748v2_alt 110487 10 + 1064304 ggcgcagtcg s panTro4.chr19 59044497 10 + 63644993 ggcgcagtgg i panTro4.chr19 C 0 I 1 s macFas5.chr19 54999164 10 + 59248254 ggcacagtgg i macFas5.chr19 M 10062 I 1 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e papAnu2.chr19 47105329 73 + 51301725 I e rheMac3.chr19 59974063 558 + 64156825 I a score=37810.000000 s hg38.chr19_GL949748v2_alt 110497 72 + 1064304 tcacgcctgtaatcccagcactttgggagactgaggcgagcggatcacctgaggtcaggagttcgacaccag s panTro4.chr19 59044508 72 + 63644993 tcacgcctgtaatcccagcactttgggagactgaggcgggcggatcacctgaggtcaggagttcgagaccag i panTro4.chr19 I 1 C 0 s macFas5.chr19 54999175 72 + 59248254 tcacacctgtaatcccagcactttgggaggccgaggtaggcggatcacctgaggccaggagttcgagaccag i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46812629 72 + 50890351 tcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggccaggagttcgagaccag i chlSab2.chr6 I 70 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e papAnu2.chr19 47105329 73 + 51301725 I e rheMac3.chr19 59974063 558 + 64156825 I a score=21244.000000 s hg38.chr19_GL949748v2_alt 110569 27 + 1064304 cctggccaacatggtgaaaccccgtct s panTro4.chr19 59044580 27 + 63644993 cctggccaacatggtgaaaccccgtct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59974621 27 + 64156825 cctggtcaatatggtgaaacccccact i rheMac3.chr19 I 558 C 0 s macFas5.chr19 54999247 27 + 59248254 cctggtcaatatggtgaaacccccact i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46812701 27 + 50890351 cttggtcaacatggtgaaacccccact i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e papAnu2.chr19 47105329 73 + 51301725 I a score=118453.000000 s hg38.chr19_GL949748v2_alt 110596 93 + 1064304 ctactaaaaatacaaaaattagtcgggcgtggtggcgggcgcctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaacccc s panTro4.chr19 59044607 92 + 63644993 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcacctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaaccc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102686488 92 - 106955855 ctactaaaaatacaaaaattagtcgggtgtggtggcaggcgcctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaaccc- i nomLeu3.chr10 M 1644 C 0 s rheMac3.chr19 59974648 99 + 64156825 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcgcctgtaatcccagctactcgggaggcgggaggctgaggcaggagaataacttgaaccc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999274 99 + 59248254 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcgcctgtaatcccagctactcgggaggcgggaggctgaggcaggagaataacttgaaccc- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46812728 92 + 50890351 ctactaaaaatacaaaaattagtcgggcgtggtggcgggcgcctgtaatcccagctactcgggaggca-------gaggcgggagaataacttgaaccc- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e papAnu2.chr19 47105329 73 + 51301725 I a score=132028.000000 s hg38.chr19_GL949748v2_alt 110689 75 + 1064304 gggaggcagaggctgcagtgagcctagattgtgccactgctctccagcctgggggacaagagcaagtcttcgtct s panTro4.chr19 59044699 75 + 63644993 gggaggcagaggctgcagtgagcctagattgtgccactgcactccagcctgggggacaagagcaagacttcgtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920937 75 + 60714840 gggaggcagaggctgcagtgagcctagattgtgccacagcactccagcctgcgggacaagagcaagacttcgtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686580 75 - 106955855 gggaggcaaaggctgcagtgagcctagattgcaccactgcactccagcctgggggacaagagcgagatatcgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974747 75 + 64156825 gggaggcggagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcgtct i rheMac3.chr19 C 0 I 9 s macFas5.chr19 54999373 75 + 59248254 gggaggcggagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcgtct i macFas5.chr19 C 0 I 9 s chlSab2.chr6 46812820 75 + 50890351 gggaggcagagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcatct i chlSab2.chr6 C 0 I 12 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e calJac3.chr22 45386859 1589 + 49145316 I e papAnu2.chr19 47105329 73 + 51301725 I a score=24414.000000 s hg38.chr19_GL949748v2_alt 110764 21 + 1064304 ---caacaacaacaacaataacaa s panTro4.chr19 59044774 12 + 63644993 ---caacaacaacaa--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921012 18 + 60714840 ---caacaacaacaa---caacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686655 15 - 106955855 ---caacaacaacaa------caa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974831 21 + 64156825 CACCAACAACAACAA---TAACAa i rheMac3.chr19 I 9 C 0 s macFas5.chr19 54999457 21 + 59248254 CACCAACAACAACAA---TAACAa i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47105402 21 + 51301725 caccaccaacaataa---caacaa i papAnu2.chr19 I 73 C 0 s chlSab2.chr6 46812907 21 + 50890351 caccagtaccaccaa---caacaa i chlSab2.chr6 I 12 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e calJac3.chr22 45386859 1589 + 49145316 I a score=264536.000000 s hg38.chr19_GL949748v2_alt 110785 108 + 1064304 caagttcctcaggtgactctg---atgtgcagccaagttgg-aaagtcatcg--CTAGATCCGCGGTGTGCAAAGTG--AACTGCGGACCGTG-----GACTGCGGCACTTGTTAGAAAAG s panTro4.chr19 59044786 112 + 63644993 ---gttcctcaggtgactctg---atgtgcagccaagttgg-aaagtcatcg--CTAGATCCgcggtgtgcaaagtgtgaactgcggaccgtgtccgtcactggggcacttgttagaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921030 114 + 60714840 aaagttcctcaggtgactctg---atgtgcagccaagtttg-aaagtcaTCA--CTAGATccttggtgtgcaaagtgtgaactgtggaccgtgtacgtcactg-ggcacttgttagaaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686670 116 - 106955855 aaagttcctcaggtgactctg---atgtgcagccaagtttgaaaaGTCATCA--CTAGATccttggtgtgcaaagtgtgaactgtggaccgtgtacatcactggggcacttgttagaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974852 117 + 64156825 aaagttcctcaggtgactgtg---atgtgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccatgtgcatcactggggcacttgttagaaaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999478 117 + 59248254 aaagttcctcaggtgactgtg---atgtgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccatgtgcatcactggggcacttgttagaaaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105423 117 + 51301725 aaagttcCTCAGGTGACTGTG---ATGTGCAGCCAAGTTTG-AAAGTCATCACTCTGGATCATTGGTGGGCAAAGTGTGAACTGTGGACCCTGTGCATCACTGGGGCACTTGTTAGAAAag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812928 117 + 50890351 aaagttcctcaggtgactgtg---atatgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccgtgtgcatcactggggcacttgttagaaaag i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19606658 116 - 122678785 caagccacccagggtattgtagccacgtgcaaccaaatttg-agaaccactgCTCTGTATccttgctactcaaagtgccaactgtggagcatcagcatcacctggcaactcctgaat---- i canFam3.chr1 I 136 C 0 e mm10.chr7 3641526 2427 + 145441459 I e calJac3.chr22 45386859 1589 + 49145316 I a score=302552.000000 s hg38.chr19_GL949748v2_alt 110893 99 + 1064304 Cagaatttgcattttaacacattcctaggtgattccggagatgtct--gagaagcgatactttgTCCAGGGGCCACAGTTTGAATAG---CAGAGCTCTAGAAC s panTro4.chr19 59044898 80 + 63644993 cagaatttgcattttaacacattcctaggtgattccggagatgtct--gagaaacaatactttgTCCAGGTGCCACA----------------------AGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921144 99 + 60714840 cagaatttGCATTTTAACACATTGCTAGGTGATTCCGGAGATGTCT--GAGAAGCAATACTTTGTCCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686786 99 - 106955855 cagaatttGCATTTTAACACATTCCTAGGTGATTCCGGAGATGTCT--GAGCAGCAATACTTCGTCCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974969 99 + 64156825 cagaatttgcattttaacacattcctaggtgattccggaggagtct--gagaagcactACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999595 99 + 59248254 cagaatttgcattttaacacattcctaggtgattccggaggagtct--gagaagcactACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105540 99 + 51301725 cagaatttgcattttaacacatTTCTAGGTGATTCCGGAGGAGTCT--GAGAAGCAATACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i papAnu2.chr19 C 0 I 335 s chlSab2.chr6 46813045 99 + 50890351 cagaatttGCATTTTAACACATTCCTAGGTGATTCCGGAGGAGTCT--GAGAAGCAATACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388448 96 + 49145316 caaaatttgcatcttaacaagttccc---tgattccagggaagtct--gagaagcactACTTTGTCCAGGAACCACACTTTGAATAG---CAAAGCTCTAGAAc i calJac3.chr22 I 1589 C 0 s canFam3.chr1 19606774 103 - 122678785 cagaatatgcattttaacaaatctccagttggttcCC-AGATGTCTGAGAGAGGCATTGCTCCATCCAGGGACCACACGTTGAAGAGTGTTGTGGCTCTAGATC i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I a score=84130.000000 s hg38.chr19_GL949748v2_alt 110992 37 + 1064304 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGTGTGTGG s panTro4.chr19 59044978 37 + 63644993 AATAACT--------------------------------------------------------GTAGGCTTCATTCCCGTTGTCTGTGTGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921243 37 + 60714840 AATAACT--------------------------------------------------------CCAGGCTTCATTCCCGTTGTCTGTGTGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686885 37 - 106955855 AGTAACT--------------------------------------------------------CTAGGCTTCATTCCCGTCGTCTGTGTGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59975068 37 + 64156825 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999694 37 + 59248254 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105974 37 + 51301725 aataact--------------------------------------------------------ctagGCTTCATTCCCGTTGTCTGCATGTGA i papAnu2.chr19 I 335 C 0 s chlSab2.chr6 46813144 37 + 50890351 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388544 91 + 49145316 agtaactcccaaacggtaatgcacacggggatcacc--gggaagtctgtgaagatgcagatccccaggcttcattcccgttgtctgtgtgtgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19606877 91 - 122678785 AATGGCCATCCAACTccagtgagcatggggatcacccagggaagtgtgtaaaagtgcagacgtctaggcttcgctatctccatcggtgtag-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I a score=6001717.000000 s hg38.chr19_GL949748v2_alt 111029 1648 + 1064304 GCCTACGAATA-TGCATTTTCGCAAGCATTCCTCCTCCCCCTTGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATCCTCCTTCACGTTCACCTCTCCCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGAATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGTCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtgctaagtgctggagatgcaaaATCCAGACAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggcgcgcaggagcgctccgcccgggagggaggtcagggaagttttctctccaagaagacaacagagctgagacctgaaacgagcaggcattagggagccaccc------------------gtCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGACGCAGAGGAGAATGACTGTCCTACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGAGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAG----AGGGAAGCTGCTTACCTGGCCGGGACGCAACGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACTTTTAGGGCC-AACGAAGAAAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCTGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCGTAGCTCCTCCCCCAGACCAATTGTTTTAAGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGCCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAAAGCCTCCAAGGGTCAGGAGCGACGTTCAGCAGGAGCAATGACTGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA s panTro4.chr19 59045015 1648 + 63644993 GCCTACGAATA-TGCATTTTCGCAAGCATTCCTCCTCCCCCTCGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATCGTTTTTCACGTTCACCTCTCCCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGAATCTGGCTTCCCATCTCGGTTGTGTGTGTGACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATCCatctattcctttgacaaatggttact----acttcctgcgtgctaagtgctggagatgcaaaATCCAGACAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggcgcgcaggagcgctccgcccgggagggaggtcacggaagttttctctccaagaagacaacagagctgagacctgaaacgagcaggcgttagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTGTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGAGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGACATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAG----AGGGAAGCTGCTTACCTGGCCGGGACGCAAGGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAACGATAACTGTTAGGGCC-AACGAAGAAAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCTGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCATAGCTCCTCCCCCAGACCAATTGTTTTAAGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCACGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAAAGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACTGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921280 1642 + 60714840 GCCTACGAATA-TGCATTTTTGCAAGCATTCCTCCTCCCCCTTGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATACTTGTTCACGTTCACCTCTCCCTGGGATTTATCTGACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTGAATCTCAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtgctaagtgctggagatgcaaaATCCAGAC--GGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAagcgcgcaggagcgctccgcct----gggaggtcagggaagttttctctccaggaagacaacagagctgagacctgaaaccagcaggcattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGATGCA---GAGAATGACTGTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCTTCAC-GCTTCCCAACCAATTCTGCCATGCACGG---TGCCAGTGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAGAGACAGGGAAGCAGCTTACCTGGCCGGGACGCAAGGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACTGTTAGGACCAAACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCGTAGCTCCTCCCCCAGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCC-ATCGAACGCCGCG-CTTGGAGCTACCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTTCCAGAAACCAATAGAACGCCTCCAAGGATCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGTCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686922 1648 - 106955855 GCCTACGAATA-TGCATTTTAGCAAGCATTCCTCTTCCCCCTTGCCTCAGACCATTCTGATGC-GGTGGTGCTGAAGGGCTCCATACTTGTTCACGTTCACCTCTCCCTGGGGTTTATCTTATTTTCCACTACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAATAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacagatggttactgactacttcctgcgtgctaagtgctggaaatgcaaaATCCAGACAGGGAAAC-CGAGTAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggctcgcaggagcgctccgccc----gggaggtcagggaagttttctctccaagaagacgacagagctgagacctgaaacgagcaggcattagGGAGCCACCT------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGAGGAGATGCAGAGGAGAATGACTGTGTCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCTATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGTGACTTA-CAGCAGTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAGAGACAGGGAAGCAGCTTACCTGGCCGGGACGCAAGGGTCGCGCCCAAGTCCCACTTCTGCCAGCTACATACACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCAAGCTATTGGTCAAACCAGCAGGAATGATAACTGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCAGTGGCTGTTTTGATTGGCAGATGATTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGTCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCCAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCCCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCAGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-Gggaggaggaggaggagcgggga-gAAA-ACCTGGGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCTTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59975105 1641 + 64156825 GCCTAAGAATA-TGGATTTTTGCAAGCGTTCCTCC-CTCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGAGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttaccgactacttcctgcgtgctaagtgctggagatgcaaaatccagacagggaaac-cgaataattacgaaaatgacgatagacgtgcaaaaataaattctaacgaacaaggcgcacaggagcgctccgccc----gggaggtcagggaagttttctccccaagaagatgacagagctgagacctgaaacgagcaggaattagggagccaccc------------------gtCTCCTCTGTACCTTCGGCGGCGTCCTCAACACGCTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACGGAGGCACTTGGGGAAAGAAGAGGCAGCTGAGAGACAGGGAAGGAGCCTACCTGGCCAGGACGCAAGGGTTGCACCCAAGTTCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCAGAGACGAGACGAGAAGAGAGGAGGCCAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGATCCCCGACCCCC-------GTCGTC-AGAACAA i rheMac3.chr19 C 0 M 434 s macFas5.chr19 54999731 1636 + 59248254 GCCTAAGAATA-TGGATTTTTGCAAGCGTTCCTCC-CTCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCATCTATTCCTTTGACAAATGGttactgactacttcctgcgtgctaagtgctggagatgcaaaatccagacagggaaac-cgaataattacgaaaatgacggtagacgtgcaaaaataaattctaacgaacaaggcgcacaggagcgctccgccc----gggaggtcagggaagttttctccccaagaagatgagagagctgagacctgaaacgagcaggaattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCGGCGGCGTCCTCAACACGCTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACGGAGGCACTTGGGGAAAGAAGAGGCAGCTGAGAGACAGGGAAGGAGCCTACCTGGCCAGGACGCAAGGGTTGCGCCCAAGTTCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGAGTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGATCCCCGAGCCCC-------GTCGTC-AGAACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47106011 1633 + 51301725 GCCTAAGAATA-TGCATTTTTGCAAGCGTTCCTCC-CCCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTACTCACCTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGCGTG----ACCCTGGGCAAATGCCTCCCGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTc--------------acattcattcatctgttcctTTGACAAATGGTTACTGACTACTTCCTGCGTGCTAAGTGCTGGAGATGCAAAATCCACATAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACgtgcaaaaataaattctaacGAACAAGGCGCACAGGAGCGCTCCGCCC----GGGAGGTCAGGGAAGCTTTCTCCCCAAGAAGACAACAGAGCTGAGACCTGAAACGAGCAGGCATTAGGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCGGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GCTTCCCAACCAGTTCTGCTATGCACGG---TGCCAGTGACTTA-AAGCACTGTCTCTGGtcccttccttctttcactc-------agcaaat----aATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGA---AAGAGGCAGCTGAGAGACAGGGAAGCAGCCTACCTGGCCGGGACGCAAGGGTTGCGCCCAAGTCCCACTTCTGCTAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTgaggc-gggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGAcgagaagagaggaggggaggcctCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGccccgaccccc-------gtcgtc-agaacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46813181 1637 + 50890351 GCCTAAGAATA-TGCATTTTTGCAAGCGTTCCTCC-CCCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACCCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAGGTTTTCAATCACAAGTCATCCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtactaagtgctggagatgcaaaATCCACATAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTGCAAAAATAAATTCTAACGAACAAGGCGCACAGAAGCGctccgccc----gggaggtcagggaagttttctccccaagaagacaacagagctgagacctgaaacgagcaggcattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCGGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCACGGTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGCCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGAAAGAAGAGGCAGCTGAGAGACAGGAAAGCAGTCTACCTGGCCAGGACGCAAGGGTTGCGCCCAAGTCCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCCGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGTCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388635 1638 + 49145316 gcctaagaaaa-tgcatttttgcaagCACGCCTCC-CTCTCTTGCCTCAAGCCATTCTGATGCGGGTAGTGCTGAACGGCTCCACACTAGTTCACGTTCACTTCTGCCCTGGATTTCTCTTACCTCCCACCACCTAGAGAGGAAGGGGCGGATCTGGCTTCCCATCTCGACTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGCAAGCCTCAGTGTCTAGAACGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttggcaagtggttactggctacttcctgagtgcgaaatgctggagatacaaaATCCAGACAGTGAAAC-CGAATAATTACGAAAATGACGGTAGACGTGCAAAAATAAATCCTAAccagcaaggcgcacatgagcgctcaacac----gggaggtcagagaagttttctccctaagaagacaacggagctgagacctgaaacgaggaggcattagGGAGCCACCC------------------GACTCCGCTGTACCTTCTGCACCGTCCTCAACacagtaaggaaactgaggagca---gagaatgactgtcc--ccatctggtcacgtaacgaggcagaggcaggacaaaaactccatacctcgc-gcttcccaAGCAACTCTACTATGCACAA---TGCCAGTGGCTTAGAAGCACTATGTCTGGTCCCTTCCTTCTTTCACTC-------AGCAGATAATGAATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGAAAGACGGGGCAACTGAGAGAGAGGG-AGCAGCCCTCCTGGCCGGGACGCAAGGGATGCGCCCAAGTCCCACGTCTGCCGACT------ACACCCTCTTTCACACGCTCTATGAGCAGCCACCGCCCACTCGCCACACTATTGGCCAAACTGGCCTGAATGATAACCCTCGGGGCC-AACGAAGATAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATAACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCAGTAGGTACACGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACCGTCCTAGCTCCTCCCCCGGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGCTCGGGTCCTCGCGCTGGCGTGTTGTGCCCCGAGGC-GGGAGGAGGAGGAGGAGCCGGCAGGAAA-ACCTGAGCCAATCCTAGCAAGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGTGATTACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTACCAGGAACCAATAGAACGCCCCCAAAGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTTGGGGCTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCGTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3643953 1433 + 145441459 gccGAAGAATA-TGCCTTTTTATAAGCCATTTTTT-CTCTCTTGCTTCATGCCATTCTGAT-------GCGGTGAA-------ATGCACGTGCACGTTCTCTTCAAGTGTGGATTTATCTTCTTTTCCTCCACATAG-TAGGCAGAGATAGATCGAGTTTC-------------------------------------CCCAATTCATGAAAAC----GTGGTGCTCACGTTTGCAACCT--AGTCA-------------------------------------------GCAAAGGGCTATGGAGTGCTTCATGGGTACTAAAC------AACGAGAAATCCAGAGAGTGAGACTCAAGTATGTGTAAAAACGGCAGGAATCAAACAAAATTAAACC--------AGAGGCTCACCTAAGCACTCGGCAA----GGGTGGTCGGAGAAGTTTACTCCTTAAGAAG----CATAGC--AGAACTCTAGTGAGTAGTCATTACAGATGTAACCGAGGTAGGGCAAAGCGCAGTTTCCTCTACAGCT-----GGAGTCCTTGCAACTCCAGGGAAG-----------------------GTCCCA--GTCTGCTAACTTAACCAGAGA-------AACGTCAGTCCCACGCCTTGT-GTTTCTCAGTCGCTTCTGC--------------------------AA----TGTTCCTGATTCCTTCTTTCTTTCTTTCATCCTTTAGAAAGCACTGAGTTTTAGAGATATACCAA-GCAAACGCGCTTGGGGAATAACTACGAGGATCAGAT-------AACAGCCTA---GACAGGCAAAGGAAGGATGC--------------TCCGACAACCACAC---------------------CTGTCGGCAGGT------TAATAGCTACCCTATTGGCTAA--------------------------CC-GAGGGAAGGGGCGGGGTG------TTTGTCTAGCTCCTCCCCTTAGGGCTGGCGGCTCTTTTGATTGGTAGATGACTTGGGTTTACTATCCCCAACCCTCTGGCACCTCTCCGTCTCCCACTAGATAAGCTTCCTTTAACACTCACACGCTATGCTTTTTGTCGTTTTCCTCTACCCACATTCATAGCTAACCAATGAGTTCAGGGTAGAATACA-CCTCGCAACCAATTACAGCTGCCTTTAAACTTGACGAGTAACTTCCCGCCCCT----CACCCTGACTCCTCCCCGCTGCCAATTGATTTAGGGTAAGGGGGCGGACACATCCAATCAGCACGACACAGGCTTCCTGATTGACACCCAGGTCCTCGCGCTGGCGTGTTGTGCTCCGAGGAGGGGAGGAGGAGGAGGAGCTGGGAAGAAATACCCGAGCCAATCCAAGCAAGCTGAGCGGGAGGCCAATCGAACGCCGCGCCTTGCCGAGATCAGCCAATCATAATGAAGAGGTTGGCCTCATTCTCGCTAGGAACCAATGGGGCGCGCCTAACGGCGCAGAGCGACGTACTGCGGGAGCAATGACGGACCTATATTCGGGGCTCGGGGGCGGGCCGGCGCCA-----GAGAGGAGAAGAGAGGAGGGGAGG---CCTCCGCCGCCGCCATCTTGGACCGGGCCCGTTCAGCTTCCGTGGAGCCGTCGGCAGCCGCTGCCGGGCCTTTCCTTGATCCCTGAATCCCCTACTCGGTCGTCTAGAACAA i mm10.chr7 I 2427 C 0 s canFam3.chr1 19606968 1304 - 122678785 acctgggaacactgcgttttcacaaac---ccttc-ccctactttgccaggcgattccgat--------------gcaGCCC---------TCACTTGCAC--CCTCCTTGGATTTGTCCT--TCCCCAC---------------------------CTTCCCATCTAGACCGTCTG----ACCCTGGGCAAATGCCTCAGGGTTCGTGAAAGCACCAGTGCCTCCCGAGTCGTCGACCACAAGTCTTCCCTCGCATGCATGCACATGCATTCATTCATTCCTTCCCTGAGCCAACAGTTACTG---TGTTCCTGCG--------------GATGCCAGCTCCAGG-AGGGCAGC-C----------------------------------------------------GGGGCGCCGGAGGGCACAGGGC----G----------------------------------------------------------------------------------------------ATCTCCTGCGTATCCTCTGCATTGTCCTCACGACGCGGAGGAAGCGGACGTGCAG------------------------------------AGGCAG----------------------CTCCT-GTTCCCCCGCC------GCGGAGCGCGGATCTGCCGGT-------GACCACTGCCTC----------CCTCCTCCGATC-------TACAACC-CTGAGTCCGAAACATG---------AGAATCCC---------AAACAGGCAGCG-------AGAGGAGCA--CTACGCGCCCGGGAGCCAAG--------------------CCCGCCTGCT------ACGCCCGGTTTCACACGCCGCGAAGGCCGGTGCCGCCCCCTCGCTGCGCCCCTGGACTGGCCGCGGTGAGCGACAGCTGTCCTGGCC-AACGAGCGGAGAGGGGCGGGCCCGCCGGCCCAGCTCCGCCC-CGTGGCCCAGC-GCAGCTTTAATTGGCAGGCGACTTCGGCA----------------------CCTGTCCTCCTCCCATTAGGTGTAAGGCCTTTCACGCCCACGCTCCACGCCTGCCTCCGCTTTCC-CCACCCACTTCCGGAGCCAACCAATGGCCTCGGGGCAGAAGATCCCCTCACAACCAATTACAAACGGCCCTAAACTCGACGCCCGACTTCCCGCCCCT-GATCAGCCTGGCTCCTCCCCGCGGCCAATTGGTTTAGGAGAGGGGGGCGGGTGTATCCAATCAGCACGACAGTGGCGTCTTGATGGACGCGCGGGCCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GG--GGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGTAGCCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGGGATTGCCCAATCGGCGAGAGGGGGCCGGCTGCGTCCTGGCCAAAGACCAATAGGGTGCGACCGAAGGGCAAGAGCGACGTGCCGCCGGAGCAATCACAGGCCTGTGCACGGGGCTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCCTGAGCCCCGA-CCCC-------GTCGTC-AGAACAA i canFam3.chr1 C 0 C 0 a score=136755.000000 s hg38.chr19_GL949748v2_alt 112677 38 + 1064304 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG s panTro4.chr19 59046663 38 + 63644993 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55922922 38 + 60714840 CCCC-GGGCCCACT--CC------------CCTAACCCCAC-TTCCG--CTTCGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102688570 40 - 106955855 CCCCGGGGCCCACT--CC------------CCCAACCCCACTTTCCG--CTTCGCG i nomLeu3.chr10 C 0 M 635 s macFas5.chr19 55001367 38 + 59248254 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47107644 38 + 51301725 cccc-gggcccact--cc------------cccaaccccac-ttCCG--CTTCGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46814818 38 + 50890351 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390273 38 + 49145316 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645386 52 + 145441459 TCCC-GGGCCCACT--TCCTCTATCAACAACCCAACCCTAC-TTCCGGCTTTCGCG i mm10.chr7 C 0 I 2 s canFam3.chr1 19608272 40 - 122678785 CCCC-GGGCCCACTTCCC------------CCCCACCCCAC-TTCCG--CTTCGCG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59976746 434 + 64156825 M a score=1206097.000000 s hg38.chr19_GL949748v2_alt 112715 490 + 1064304 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCTTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGTTCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCGCCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG s panTro4.chr19 59046701 490 + 63644993 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCTTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCTCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGTTCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55922960 490 + 60714840 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGCCCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55001405 490 + 59248254 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTTCCCGCAGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGctccctccctctcgccctcccgttcctccGCCTTTTTCACGCCCCTCAGCGCCGCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCACCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47107682 490 + 51301725 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGgaccccttcccctcctccc-cccggcgccatcggccgcccttcccgcagcctcccgccctGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTCCGCCTCTTTCAcgcccctcagcgccgcccgggggtccttccgcgacccggaccccgggccccgcccgccgccacctccccgcgtggcatcgcgtcgg-gccccccggTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46814856 490 + 50890351 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTTCCCGCAGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCCGGGCTCCCGGCGGGGGGCGGctccctccctctcgccctcccgttcctccGCCTCTTTCACGCCCCTCAGCGCCGCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCACCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390311 491 + 49145316 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCCTCCCGGCACCATCGGCCACCCTCCTTGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGTCTC--TCCT---CGCCCGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGTTCCCCGCGGGGGGCGGctccctccctctcgccctcccgctcctccgcctccttcacgcccctcaccgccgcccGGGGGTCTTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTGGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645440 406 + 145441459 CTCTTATCGCGATAGCGCCCGGGCTCGGGGCGCGAGGAAAGAGGAAAAAAAAAAAAAAAAAAGGCGGCGGGCGGGCGCTCGCCTCTCTCTCCCCCCTCCTCGCCTGTCGCGATACGCTCCGCAGCGGCGGCGCCAGCTCCTGCGGT--GAGCGTCAGGTTCGACTGGGCCGGACCCCTTTCCCTCTTCC--CTCAGCTCCATCGGCCG-----------ACTTCTTGCTCC-GCGACCCTGCTGCCTGTCGCGACACGGCCTCAGCTCC---CGCCGGGCCCAAGCCGCGCGCTCGGGCCCAGCTTCGG--CTCGGGCGGGCGGGGACCCTCTCC----------------------TCTCTCT------------------------GTCCTCCCGCG-TCCGGAC------------------------TCCCGCGTGGCAGAGCGCCGG---------------------------------CCCCGGGTGCGAGGTGCCCGTCCTCCTCCGCGTCTGGCTGGGCTTG------ i mm10.chr7 I 2 C 0 s canFam3.chr1 19608312 375 - 122678785 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGTGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CC--------------------------------------GGCGCCACCACCGCCTGTCGCGACATggccgc--ccccgcacccccggcccccgcgggcggACCTC---C-------GGCTCCCGGCAGG-GGCGgcccc-------------------------------------------ggcgcccgcc----gccctgcc----cccgccccccgtgcccccctcgtccgcgccccgcggcg-------gcgccggaggtcccccgcgggggtccggtggtg----------cgggcgcgcgggg-ccgccccTTTCCGCGTCGGGGGCGGC----GGCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102688610 635 - 106955855 M e rheMac3.chr19 59976746 434 + 64156825 M a score=286512.000000 s hg38.chr19_GL949748v2_alt 113205 122 + 1064304 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGTGGGGCAGCCTCCGCGCCGGGGCT-----TCTCCCTCGACGG s panTro4.chr19 59047191 122 + 63644993 CAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGTGGGGCAGCCTCCGCGCCGGGGCT-----TCTCCCTCGACGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923450 122 + 60714840 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGATCCTTCGCGTTGTGGGGCAGCCTCCGCGCAGGGGCT-----TCTCCCTCGACGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977180 122 + 64156825 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACGG i rheMac3.chr19 M 434 C 0 s macFas5.chr19 55001895 122 + 59248254 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47108172 122 + 51301725 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTgcctgcccccctcggcctcggTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46815346 120 + 50890351 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-------TCTCTCGACGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390802 124 + 49145316 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTC-GGGCTCAGGTGCCTGCCCCCCTCGCCTTCGGTCCCTCGCGTTG-GGGGCAGCCT-CGCGCTGGGGCTTCTCTTCTCCCTCGACGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645846 38 + 145441459 GAGCGGTGGG----------------------------------------------------------------------CGCGCTGCGGG-------CCGCGGAGGGGTC-----TTTC--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19608687 90 - 122678785 -GGGGAGGGGGTCTCCACCCCGGGGCCAGGTCCC---------------------CCTGCAccgcccgccgccggccccc----------ggcAGCCTCCGC--CAAAGTT-----TGCCCCGCAGCGG i canFam3.chr1 C 0 I 263 e nomLeu3.chr10 102688610 635 - 106955855 M a score=24866.000000 s hg38.chr19_GL949748v2_alt 113327 15 + 1064304 TGGCGGGGAGG--GGGG s panTro4.chr19 59047313 15 + 63644993 TGGCGGGGAGG--GGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923572 17 + 60714840 TGGCGGGGCGGGTGGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977302 15 + 64156825 TGGCGGGGTGG--GGGG i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55002017 15 + 59248254 TGGCGGGGTGG--GGGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47108294 15 + 51301725 tggcggggtgg--gggg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46815466 15 + 50890351 TGGCGGGGTGG--GGGG i chlSab2.chr6 C 0 I 12 s calJac3.chr22 45390926 11 + 49145316 TAGCGTGGAGG------ i calJac3.chr22 C 0 C 0 e mm10.chr7 3645884 0 + 145441459 C e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M a score=2822.000000 s hg38.chr19_GL949748v2_alt 113342 7 + 1064304 GTGGTGG s panTro4.chr19 59047328 7 + 63644993 GTGGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923589 7 + 60714840 GTGGTGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55002033 7 + 59248254 GTGCCAA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47108310 7 + 51301725 gTGCCAA i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45390937 7 + 49145316 GTGCCAG i calJac3.chr22 C 0 I 4 s mm10.chr7 3645884 3 + 145441459 -TGC--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M e chlSab2.chr6 46815481 12 + 50890351 I e rheMac3.chr19 59977317 13 + 64156825 I a score=650.000000 s hg38.chr19_GL949748v2_alt 113349 1 + 1064304 T s panTro4.chr19 59047335 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923596 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55002040 1 + 59248254 C i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47108317 1 + 51301725 C i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46815493 1 + 50890351 C i chlSab2.chr6 I 12 C 0 s calJac3.chr22 45390948 1 + 49145316 C i calJac3.chr22 I 4 C 0 s mm10.chr7 3645887 1 + 145441459 T i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M e rheMac3.chr19 59977317 13 + 64156825 I a score=3600.000000 s hg38.chr19_GL949748v2_alt 113350 1 + 1064304 C s panTro4.chr19 59047336 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923597 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977330 1 + 64156825 C i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55002045 1 + 59248254 C i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47108322 1 + 51301725 C i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46815494 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390949 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3645888 1 + 145441459 C i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M a score=2493823.000000 s hg38.chr19_GL949748v2_alt 113351 889 + 1064304 GGGACGAGGA-CCCCAGCTGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCTGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCATAGCGAGTAGCGCCCTGGGTGGCTCCAGCCTCGCCATCCCGCTGCACTGGGCGCCTGCCTTTTTGGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGTCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCGTGACTCTCCGACCTTCTGGGTGTGGGCGTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGTTGCTGGGGGCTGCTGGGATCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAAGACACTAAG-CCGCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCACCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGTCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCCCTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCATCTTCACACCAGTCTCCTCCTTTAGGGTGTCAGCTCTCCAAGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGACTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCTGG s panTro4.chr19 59047337 886 + 63644993 GGGACAAGGA-CCCCAGCTGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCT---GTCTCTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTC--ATAGCGAGTAGCGCCCTGGGTGGCTCAAGCCTCGCCATCCCGCTGCACTGGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCGTGACTCTCCGACCTTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGTTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAAGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCACCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCATTTTCACACCAGTCTCCTCCTCTAGGGTGTCATCTCTCCAAGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGACTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923598 885 + 60714840 GGGACGAGGA-CCCCAGGTGGGTGGGGA-AGTCACCCTT--CCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCTGTATCGGAT-GGGAGCCTCTTGGGAGAAGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTTC--CTCTCCTAGCGAGTAGCGTCCTGGGTGGCTGAAGCCTCGCCATCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTAACTCTCCGACCTTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGGTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCGGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCTACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTCGCTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGTGGCTTCTTCCGCCTTCATATCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACAC--TGGGTTTGTTGTCTTCCCATCTACCCTTA-----CGCTGGGTGTCCGCAGTT--GGAGAACAAGGATTTTGCCTTCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102689255 913 - 106955855 GGAACGAGGA-CCCAAGCTGGGTGGGGGAAGTCACCCTTCCCCAGGGCCGAGGCCCGCCCTCCGCATCCCTCCTCACTGGCTCCCCGGGAGCGGCAGCCTCCCCTGGATCTCAGGGTTCCCAGCTGCCCG--GTCTGTATTGGATGGGGAGCCTCTTGGGAGAAGA--------GTGGAGGAGAAACTCCCC-------------------------ATTAGTTTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCT--CTCTCATAGCGAGTAGCGCCCTGGGTGGCTCAAGCATCGCCATCCCGCTGCACCTGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCTCCTGGCTTTGCAGCCTCAAACTCCCCTGCATCCTGACTCTCCGACCCTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-GCCACTGTGGTCTTGGTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCCTGGTGAAGGCTTCGTGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCAATGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCGCCTTCACACCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCTCCCTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGTCTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCCCG i nomLeu3.chr10 M 635 C 0 s rheMac3.chr19 59977331 875 + 64156825 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCCGTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTGACTCTCCGAC---CTGGGCGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAGCCCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCGCTCAGTGCAGGG-CGGGCACCCCCCC-ACCCCAGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCC---------TTCACCCCTGCCTG----TGAGGCTTCTTCTGCCTTCACACCAGTCTCCTCCTTTAGGATGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTATCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55002046 874 + 59248254 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCAGTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTGACTCTCCGAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCATGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCGCTCAGTGCAGGG-CGGGCACCCCCCC-ACCCCAGGTGAGCTCTCCTGCCCTTTTGGTGAGGGATTTTGATGTCTCCC---------TTCACCCCTGCCTG----TGAGGCTTCTTCTGCCTTCACACCAGTCTCCTCCTTTAGGATGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTATCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47108323 871 + 51301725 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCACTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCCCCGGGCGCCTGCCTTTT-gggggggTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTGAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGctttgcagccttgaactcccctGCATCCTGACTCTCCGAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----GCCGGGGTGAGCTCTTCTGCCCTTTTGGTGAGGGGTTTTGAAGTCTCCC---------TTCACCCCTGCCTG----TGAAGCCGCTTCTGCCTTCACACCAGTCTCCTCCTCTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATACTTGCATCAGATCCCACACTGTGGGTTTGTTGTCTTCCCATCTACCCTCA-----CACTGGGTGTCGGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46815495 875 + 50890351 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCACTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCA-TCTCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATCGTGGTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATTCTGACTCT--GAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAAGTGCC--------------TGGT-GAAGGACGCTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTTCCACTGCAAGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCTTTCACCCCTGCCTG----TGAGG---CTTCTGCCTTCACACCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCGCACTGTGGGTTTGTTGTCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390950 847 + 49145316 GGGACGAGGACCCCCCCCTGGGTGCGGG-AGTCCCCCTT-CCCGGGGCCGAGG-CGGCCCCCTGCATCCGTCCGCACTG--CTCCCCGGAGC-GCAGCTTCCCCTGGACCTCGGG--TTGCAGCCGCCC---CTCCGTATCGGAC-----------------AGGA--------GTGGAGGAGAAACTCCGC-------------------------GCTAG-TTGGAGCCTCAGCCGAAGTTTCCAGCTCTGTAGTCTG-AGCAGTTCC--CTCTCTTAGCGAGAAGTGCCCTGGGCGGCTCAAGCCTCAGCATCCCG-------------CAGCCTTTC-CAGGGAGTCTGG------------------------------------------------------------CTTTCCTGGCACTGGGTTCCAGGACCGTCCTCGGTGTGGCCCCCGG-CTGGCCTCGGCTCTCACTCTT----GATTGTGGTGTCC-----GCCCCTGGCTTTGCAGAGGCGAACTCTCCTGCATCCTGACTCT--GACCTTCTGGGTGCGGGCCTCTCCCTGTGATGTCAGC-GCCACTGTGGTCCTGGCGCTGGGGGCTGCTGGGCTCCCCCAGCCCTCAGGTGCC--------------TGGT-GAAGGACACGAAG-CCCCCACACTTTCCA-CGTTAAGTCGGCTCC---------CAGCGCTAGCGCTTCTTTCTAGGCAGCCCCTGCTTCTCAGTGCAGCG-TGGTCACCCTCCCTCCCCGGGGTGAGCTCTCTTGGACTTTTGGTGAGGGGTGTTGGTGTCTTCC-TCACTCCCTTTGCCTCTGCCTGGGTATGAGGCTTCTTTCCCCTTCACACAAGTCTCCTCCTTTGGGGTGTCATCACTCCAGGGGCCAAGAGGCCCACTGCCCTTGCTGTTCGCATCAGATTCCCCACTGTGGGTTTGCTGACTT-CCGTCTACCCTCA-----CACTGGATGTCAGCAGTT--GGAGAACAAGGGTTGCGCCTCCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3645889 842 + 145441459 ------------------TGGGCGCGGG-GCCCACTCCT-----GCAGTCATG-CCTTCCCCGGGAGCTC-----------CATTCGGGAGC-GTTGCCTCAGTGCACCCGAAAG--CTCCAGCTTGTTGGTGTCTTGATAGGG--GGAAGCCTCTTTGGAAGAGATGGATCTTGTGGAGGAAAAAGTCCCCAAGACCCGAGGGTGCAGTTAACGTTGTGAG-TTGGAGCCTAAGCCAAAGTTTCCACCT-----------AGTCCTTACAGCTCTAGCAGTGA--AGTCTCCTAGAGG---------------TCCCTTTCCACCA---ATCTTCTTTTT-AAGGAAGCATGGGGTTtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTTGTTTTAACACTCCCTCCCCAAACCTTGGATTCAGGACTGTACC--GTATTGCTCACTTCCTGGCTTCACATCTTTTGCATCTTTGA-GGTGGGGTATCAGTGGACTCTAGCTTTGGGGATGCAGGCTCCACTAC-----GATGCACGGTCTGCCTCGGTGGGTGAAGCTTCCTAAGTGGTTAGGTATTGCTGTG-----TGTGGTGAGGACCGCTTAGCTTTTCT----TTCTAGATCT--------------GGGTCGGTGGAATGCGAG-CTCCCATGCTTTCAGTTGTT-GGTGCTCTTCTGTTG-GGACAGTTGAAGCAC----TTCTAAACAG---CTGTATCTCGGTTCCGGGACTGTCATCCCT----CTTAGGATTAGCT-TTCTGTTCTTTTGGCTAGGGGCTT-----CCTCAC--------CGTCTCCCTTCCCCG-------------------------------GTCATCACCTGGACTGCCATCTCTCTG--------------------TATTTCCATTCTCATCTGCCCAGCCTATGTGGATATGTGATCTT-----TTATAATTGAAATCCACTGGGTGAAAGCGTTTCAGAGGTAGAATGGT----CCATCTCA i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I a score=1828067.000000 s hg38.chr19_GL949748v2_alt 114240 562 + 1064304 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCACCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTTTTCTGGATTTGAGGTGTCCACGCCTCTGCATGTGTCCCCACCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCCGGCTCATGCTTCCAAAACCCCCTCTTGATTTGTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTAGACCCTGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAGGTGGGAGATTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTTCTTCTGGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CTGGGTTAAGGATCACCCTTCA s panTro4.chr19 59048223 562 + 63644993 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCACCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCACTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTAGACCCTGTCCCTTGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAGGTGGGAGTTTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTTCTTCTGGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CTGGGTTAAGGATCACCCTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55924483 562 + 60714840 CCCCGCTGCTGGTACCCCGTGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCGCCTCCCCCAGGGATAAGATTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCATCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTTCCCCCGGCTAATGCTTCCAAAACCCCCTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTAAGTCTCAAGCAGGAGACTC-CACTGTAGACCCCGTCCCTGGGAC-CAGAGATTTCTCTGGTGTAGAC-TTTCCAAGGTAGGAGTTTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCTCTAACGCGTCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGACCACATCAGCAGCCAC----CCGGGTTTAGGATCACCCTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690168 559 - 106955855 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACTCG------GGTCCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCGCCTCCCCCAGGGATAAGGTTCTTGCTATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCATAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCTGGCTAATGCTTCCAAAACCCCCTCTTGATTTTTCACTGTATGGGGTAAGGCATGATTTCCTG-GCTGCGTGGATGTAAGATACCTGAG--TCAAGCGGGAGACTC-CCCTGTAGACCCGGTCCCTGGGAC-CAGAGATTTCTCTGGTGCAGAC-TTTCCAAGGTAGGAGTATCCAGCCCCCTACCCTTGGCATGGGG-ATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTCCTTCCAGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CCGGGTTAAGGATCACCCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978206 561 + 64156825 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAGGGACCCTTTCTTGGTGTTGCCTACCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTACGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCCCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55002920 561 + 59248254 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTACGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCGGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109194 561 + 51301725 CCGCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCCAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATCG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAACGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CGGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAAAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816370 561 + 50890351 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GTG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGTGTATGTCCCCACCATAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCATG-GCTGTGTGGATGTAAGGTACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGCTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-AGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACACATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CGGGCTTAAGGATCACCCTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45391797 556 + 49145316 CCCCCGTGCTGGTACCCCATGGGAGTAGGAAGCTTCCTCCACCCGGGTTCTGGTTCTTATACT-GCG-AGGTGGGGGGCGCTTCCCTCTAGGGCTGTACCTTCT-CTCCAGGGTGAGAACCCTTTCTTGCTGTTGCCTGCCCCAGGAAGAAGGTTCTTGCTATCCTTGGTATTGGTACAG-CTGCTCTCTTGGATTTGAAATGTCCACGCCTGTGTGTGTGTCCCCACCATAAGGCTGAGGACTCCTCTTGGATGCAGGTGCCCCCAGCTAATGCTTCT--AACCCCCTCTTGATTTCTCACTGTATGGGGTGAGGTAGAGGTTCCTG-GCTGTGT-GATGTCAG-TGCCTGAGCCTCAGTTGGGAGACTC-CACTATAGTCCCCGTCCCTGGGAC-C--AGACTCCTC----GTGTAC-CTTTCAAGGTGGGGGTTTCCAGCTCCCCACTCTTGGCA-TGTGCATCTC-AGT--------------GGAGATGACAGCCTCCACCCCAGGACCTAACATATCCTCCTTCCAGAGTCTCAGGGCCTC--TGTGGCCACATCAGCAGCCAC----CCGGGTTAAGGATCACCCTTCA i calJac3.chr22 C 0 I 723 s mm10.chr7 3646731 505 + 145441459 CCCA---ACTGGCACCCTGTAGGACTGCTAGCTCTCCTCA--CCG------GAGTCTTCTGCT-GTGTAAGG-GGTAGCCTTTCTCCCTGCAGTTGTGTTGTCT-TTGTCGGGTAGG----------TGTTGTCACCTGCC----AGGTAAAGTCCCTGCCTTCTTTGCTATTGGCATCATCCCCTTTCTTGCGTTTGAGATGGCCACACC---ACCTATGTACCCAGTGTGAGGCT-AGGAT-ACTCTTGGGTGTGGGTGCCCCTGGCTAGTGTGACT---CCTCCTTTGTGGTTTTTCTGTG--------AAGTTATGGTTTCTTGTTCTGTGT-------------CTGAGACCTGGGTGAGAGA--C-CACTGTGGTCACTTTGCTTGGGAC-TAAAGA--GCATAAGGGGTGAC-TTTTCAAGGTGTCAGTTT----CTCCTTACCTTGGTTTTTGGGCCTCTCTAGG--------------GGAAACAGTTACTTCTA-AGCAGGGTCTACTTTATTTACC--------TCAGAGAATCTTCCTGTGGCAGTGCCAGCATCCTCTCCACTAGGTTCAAGTTCCACTTTGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19609040 484 - 122678785 CCCAGGTACCGGGGACCCCTGGGAGCCTGAGGCCTCCTAGGGCTGA-----GGCTCCCCTACCAATG-AGAC-ATGTGCACTTTGCT-GGGGGGTGTGCTTTCTCCTCCAGGGCAAGGAAACTTTCTCGGTGTTGCTTCCCCCAGGCAGCGGGTTCCTGCCCCGGTGGGCCCTGGCCCGT-GT-------TAGGTGT-AGGTGCACAGGGCAGCGCTTCTGCCCCTTCCTGCATGCT----------CTCAGGTGTGGCT--------CTAAGGCTTCCA-----CCCTCTCAG--------------------------------CG-GCTG------------------------------GGAGACCCTCGCCGTTG--TCAGTCTGCGAAGCACGGAGTTTCCTCTGCTGTAGTCTTTTCCCCGGGTGGGGTTCCCAGGCCCCCATCCTTGGTG-TCAGCCTCCC-TGTGTGTGTGTGTGTGGGGGGGTGACTACCTGCACCCTAGGCTCTA-CATGTCCCTCCTCCAGGGTCTCAGGAGCATTGTGTGGCTCCGTCAGCAGCCTC----CTGGGCTAAGGATTGCTCTCCA i canFam3.chr1 I 263 C 0 a score=7625.000000 s hg38.chr19_GL949748v2_alt 114802 3 + 1064304 ACA s panTro4.chr19 59048785 3 + 63644993 ACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925045 3 + 60714840 ACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690727 3 - 106955855 ACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978767 3 + 64156825 ACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55003481 3 + 59248254 ACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109755 3 + 51301725 ACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816931 3 + 50890351 ACA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3647236 3 + 145441459 GTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19609524 3 - 122678785 GCG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45392353 723 + 49145316 I a score=2016699.000000 s hg38.chr19_GL949748v2_alt 114805 688 + 1064304 TCACTTCTCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTGCCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGA-CCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGATGAAGTCTGGGGGGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CACCTCCCCCCGCCCC-GCCACCCGCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTCGAGACTCAGGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAAGG---------ATTTTCTTA-----GC-GGGGAAGGTGTTGTCTCTACTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC s panTro4.chr19 59048788 690 + 63644993 TCACTTCTCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTGCCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGA-CCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCTTGAGATGAAGTCTGGGGGGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CACCTCCCCCCCCCCCCGCCACCCGCCTTGTGGGTCCCTTCCCCTGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTCGAGACTCAGGCTCCAGCTTCCTTTCTCTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GC-GGGGAAGGTGTTGTCTCTACTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925048 677 + 60714840 TCACTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTG---TATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATTATCTTCCCTGAGATGAAGTTTGGAGAGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACGCCCC-------CGCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCTGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCGCC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAGATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTTGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTTCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GC-GAGGAAGGTGTTCTCTCTGCTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690730 677 - 106955855 TCACTTCCCAGAGCTCCTTGCTGCCGAGGCGGAAGCTCTCCCAGATCAAAGGCGTCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCGCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGATGGAGTGTGGGGGGCTCTTCCTTACTG--GTTTTGGCCCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCCC--------GCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAAT---CTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGTTGCTGGAGCACAGGTTCTTC-ACA--------------CCTGAGA------------GTGGACCTGTGATCACCACC-TTCCTTGGAAGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGTGGCGTCTCTGCTTCGAGACTCAAGCTCCAGTTTCCCTTCTGTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GCGGGGGAAGGTGTTGTCTCTGCTGTGGC----------TAAGGCCCTAGCCTCTCTAGGGGAGAAGTACCCTGGGCCTCTGGCACTTGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978770 674 + 64156825 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGTG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCT-CCAGACTCCTCAGTGCTCTCG-----------GAGAGCCTTTGCTGCTGCAGCGCAGGTTCTTC-ACG--------------CCTGGGA------------GCGGACCTGCGATCACCGCC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCCGCGGACTGCAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCAGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----AGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTT------GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTATAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55003484 675 + 59248254 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGTG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCTCCCAGATTCCTCAGTGCTCTCG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGGGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCCGCGGACTGCAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCAGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----AGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTT------GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTATAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109758 676 + 51301725 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAagcctcctgc-----ccctccctcctcgAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCtgct-----ca---ccccaccccac--------cccttgtGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGGGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCGCGGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCAGTGTCTCTGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTTTCTGGTCCTTTGCC----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTTA-----GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816934 692 + 50890351 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCTTCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATTTAGGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCTCACCCCA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGGTCCCAGATTCCTCAGTGCTCTTGAGAGAGCCTCAGAGAGCCTTTGCTGCCGGAGCACAGGTTCTTC-ACA--------------CCTGGGA------------GTGGACCTGCAATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCTGCTGACCACAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCTGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTTA-----GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393076 672 + 49145316 TCACTTCCCGGAGCTCCTTGCTGCCGAGGCGGAAGCTCTTCCAGATCAAAGGCGCCTCATGA-C--AGACCACTCTGTGGGCACAGGAT-GTCTC------CAAGATTAAGGACCGTCCGGTGTTAGCTCCCCAGGACAGAGCCTCCTGCCCCCTCCCTCCTTCCTCAATT------------GTTTGTGTGGTGGTATCATCTTCCCTAAAGTGAAGTTTGGGGG-----TCTTTACTG--GTTTTGACCCC-CGTTTTAGCA--TGTTGGCTCCTGTGGGGCTGGTGTCCTCCT-----CA---CCCCACCCCTT-------AGCC---TGGGTCCCTGCCC-TGTGGGAATGAGTGTTCCTCTTGGGTAAGTGTCCTCCTGGGCCAGGGTTTGCAGACTCCTCAGTGCTACTG-----------GAGAGCCCTTGCCGCCAGAGCACAAGCTCCTCTGTG--------------CCCAAGA------------GTGGACCCACAATTGTTAGC-TTCCTTGGAGGATCT-----------TGGTGGATGCCGCCC-GACTACAGCAAATGGGGCTCTTTCTTCTCTGGTGGCATCTCCGCTTCGAGACTGAAGCTCCAGCTCCCCTTCTCTCTGGTCCTTTTTA----GGGGGAACCTGAG--GTACAGACAT-----TCTCAGGCTACAGAG---------ATTTTCTTA-----GT-GGGGAAGGTGTTGTCTCCAC--TGGC----------TAAGGCTCCAGCCTGTCTAGGGGACAAGTACTCTGGGCCTTGGGCACTTGCTC i calJac3.chr22 I 723 C 0 s mm10.chr7 3647239 586 + 145441459 CTGCTTGCCACCATCCCTGGCTTCA---GTGTGAGCCCTCTTAGCCC-----TGTGCTATGCTCCAAGATGCTTCTGTGGTCACTTAGCAGTACCAGGCTTCAAAATTAAGG--------------------------------TTGTAC-----CCCT---TCATCAGGT------------CTCTGAATGATGGC-TTGGCACCTGTGGTGAGAAGTTCTATAGATTGTTCTGT------------------------------TGTTGGCTCC-----------TATTTTGAG-----TA-----------CTT--------GATTTGAGGATTTGCTACA-GCTGTGGACAGATGATCCTAATGATTTTGC---TTCCACAGACG-----CCCAGCTTCCTCCATGCTGTTT-----------GAGACCCTTCACCATCTATACATGTATTCTGT-GTGAAGGTGTTTGCTTACCTCACA------------AGGGCCCTGTAGTGATGGCC-TCCTCGAGCAGGACC-----------TGGGAAGTG----------------GGATGGG---CAGTCTTCTGTGGTGGCACCTCTACTTTGAGGCTCTAGCACTTG-----------------CCTCTGTT----TGCAGAACTTGTGCAGTCTATGCACCTTCTCCTTGTGAAGTGGGGCTTGGTTTTGTTTTGTTGTATGTGG-AGAGAAGGTATTGCCTCCACTCTGGC----------TGTGGCTCCAGCCTC--TAAAACACAAA-GTCCTGGCTCTGTGGGCCTTGTTC i mm10.chr7 C 0 I 756 s canFam3.chr1 19609527 637 - 122678785 TCACTTCCCAGTGT--------------GCCAAAGCT--------------------------CCTGGTCCACTGTG----------ACAGCCCC------CGGGGTTAGGGA------------------------CTAGGCTTTCTGC-----CCT--CCTCCCCGGGTCCCCGGCAAGGCCTCTCTGTGACTGTGCCCTTTCCCCGGAGCTGAGGTTTTGGGGGTTGTCCATGATTGTCATTTTGGTCCTGCATTGAAATGGCTGTTGCCTCCCATGGGTCTGGCGCACTACT-----TA---CCCCAACCCCA-----------GAATGGGCTCCTG----GGGAGGGATGAG------ACTTGGTGAAGC---CTCTTGGGCCAGGGCTTCTTGTTTCCTCAGTTATGTTT-----------GAGACACTTTGCTATGAGCGTGGGAGCTCTTTGGTG--------------CCTGAGATCCCCTGTCTCGGTGGGCCTACTGTGGTTACCTTTTCCTTGAGGATCCCCCAGGAGCCATGGGGGTTCCCAGCTCTATTA----GAATGGGGCTTTTCCGTT----GTGGCACCTCCACTTCAAGGCCCAGGCTCCAGTTCTCTTTATCTCTGGTCCCTTGTTTCAGGGTGGGGGAGGGA--GAGCATCTTT-----CTTCAAAGGCAGGGG---------CTGTTGCTCCC---AC-AGCAAAGGC-TCCTGTCCACTGTAGCACCCAGCCCAGAAGGTGCAAGTACCCAGAAGGTGCAAGTACCCTGGGCC-CTGGTGCCTCCCA i canFam3.chr1 C 0 C 0 a score=257185.000000 s hg38.chr19_GL949748v2_alt 115493 92 + 1064304 CTTCTCTGTGGAGGAGCTGCCTCCTCACTGGGTCTCAGCTGTAGCCGACTTCGATGTCA----CACTGTTCTGTCTGAAACATCACCTCCCTGGGT s panTro4.chr19 59049478 92 + 63644993 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCCAACTTCGATGTCA----CACTGTTCTGTCTGAAACATCACCTCCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925725 92 + 60714840 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGTCAACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102691407 96 - 106955855 CTTCTCTGTGGAGGAGCTGCCTCCTCTCTGGGTCTCAGCTGTAGTCGACTTCGATGTCACGCTCGCTGTTCTGTCTGAAACATCACCTCCCTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59979444 92 + 64156825 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004159 92 + 59248254 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47110434 92 + 51301725 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46817626 92 + 50890351 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCCGACTTCGATGTCA----TGCTCTTCTGTCTGAAACATCACCTCCCTGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393748 71 + 49145316 CTTCTCTGTGGAGGAGCTGCCTCCCC-------------------TGACTTTGATGTCA----CATTGTTCTGTCTGAAGCATCGCCT--CTGGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19610164 47 - 122678785 -----CAGATCCAGGGTTGTCTTCCC--TGGGCC-----------------------CA----AGATGTCCTCTC---------------CTGGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3647825 756 + 145441459 I a score=2171598.000000 s hg38.chr19_GL949748v2_alt 115585 726 + 1064304 TAGCGCTCTTGTTCCCCTC---------CTTCTGGCTTGTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGTG-G----GTATTCTTCCTCTGCACTAGGATACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCGTCACCTGCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAACTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTGAGCTCTGGTGTCCAGGCCCT---TGCCTTGTGTGAGCTCCCTGGGTCAAAGGGGCTTTCCCCTCCTCAGCCTGAATCCCCACTGTGGCACCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTAGAGA-----------------TTCCCCA-GGTAGGGCGTGATAGCTGA-------CCTGGGCGGGGGCTGCTGC-------GGCTTTCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAATTCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTATCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCATATcc----------gtcc-ca---tatggttgctgctagt s panTro4.chr19 59049570 726 + 63644993 TAGGGCTCTTGTTCCCCTC---------CTCCTGGCTTGTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGCG-G----GTATTCTTCCTCTGCACTAGGATACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCGTCACCTGCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGGCCTCTTCTCTCTCG-GGGCTGGGGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTGAGCTCTGGTGTCCAGGCCCT---TGCCTTGTGTGAGCTCCCTGGGTCAAAGGGGCTTTCCCCTCCTCAGCCCGAATCCCCACTGTGGCACCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTAGAGA-----------------TTCCCCA-GGTAGGGCGTGATAGCTGA-------CCTGGGCGGGGACTGCTGC-------GGCTTTCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAATTCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTATCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAGAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCATATcc----------gtcc-ca---tatggttgctgctagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925817 726 + 60714840 TAGGGCTCTTGTTCCCCTC---------CACCTGGCTTCTGACCCCTCCAGGACTTCGTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTATTCTTCCTCTGCACTGGGATACCAGTCCTTTCCATGTGGAGACACAGGGAGGGCGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGCGCTGGTGTCCAGTCCCT---TGCCTTGTGTGAGTTCCCTGGGTCAAAGGGGCTTGCCCCTCCTCAGCCTGAATCCCCATCGTGGCGCCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTGGAGG-----------------TTCCCCA-GGTAGGGCGTGTTAGCTGA-------CCTGGGCGGGGGCTGCTGC-------CGCTTTCTTTAGGTTGGGGCTTTTACCGAGGAGACTTAAGTTCTCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTGCTTGTTCTAAAGCACACcc----------gtcc-ca---tatggttgctgctagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102691503 727 - 106955855 TAGGGCTCTTGTTCCCCTC---------CACCTGCCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGCACTAGGGTACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCATCACCTCCCTAAGGTGTTGATTGCCTTGTTGAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCGTGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTCAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACGTCAGCGTTGGTGTCCAGGCCCT---TGCCTTGTATACGCTCCCTGGGTCAAAGGGACTTGCCCCTCCTCAGTCTGAATCCCCTCCATGGCACTTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTGGAGA-----------------TTCCCCA-GGTACGGCATGTTAGCTGA------CCCTGGGCGGGGGCTGCTGC-------CGTTTTCTTTAGGTTGGGCTTTTTACTGAGGAGACTGAAGTTCCCACAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCCCCGG----GGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ca---tatggttgctgctagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59979536 731 + 64156825 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCCGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTCGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TACGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCTCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGCGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004251 731 + 59248254 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCCGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTCGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TACGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCTCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGTGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCTTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47110526 731 + 51301725 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-A----GTATTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCTGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCAGGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTGTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGTGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGACAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGGACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACCC----------GTCC-TA---TATGGTTGCTGCTAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46817718 730 + 50890351 TAGGGCTCTTGTTCCCCTC---------CAGCTGACTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACCGT--GTGG---------TCTCCTCTCTGGG------GTATTCTTCCTCTGTACTAGGGCACCAGTCCTTTCTGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCCTGGGATGGAAAGTGGGAGCG---TAAGCTCTTGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGCGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCAGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTGGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393819 727 + 49145316 TAGGCCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCTGT-CAAGACTTCCTTCTCCTGCTGCCACGGC--ATGGGGGTTGTTCTGCCCTCTCTGGGGG----GTATTCTTTCTCTCCACTAGGGTACCAGTCTTTTCCATGGGGACACGCAGGGAGGGTGTCACCTCCCTAAGATGTTGATAGCCTTGTTTGGGGGTGTAGCCCATGAGACCTCTTCTTTCTCGAGGGTGGGAGCGCCTGCCCATGCCCCTCTGTTGAGTTCTTGGGATGGAAAGAGGGGGTG---TAAGCTCTGGTTCCACATTCTTGTT-CCCTTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGCTGTTGGACTTTGGTGAGGATCCTGGCAAACCTCAGGGTTGGTGTCCAGGCCCT---GGCCTCAT---AGCTCCCTGGATCACAGGGACTTGCCCCTCCTCAGTCTGAGTCCCCTCTGGGGCACTTTCTCCTGGGTCTTTCTGTTGGTTGCGTTGCCTT------AG-----------------CTTCCCT-TGTATGTTATGTTGGCTGA------CTCTAGGCGGGCGGTGCTGC-------TGTTTTCTTTAGGTGGGGCCTTTTACTGAGGAGATTTAAGTTCCCTGAAGTTTAAG--TTAGCA-------CTCCTACCTGCTACCA-CCAGAATAGGTCCCTGCGG----CGTTGG-----AGAACCCTCAGCAGGGCTGGTTACGGTGCCAGGCCTGT---CCTTT----ATGGGTCTCTT-TTCTAAAGCACCCTT----------GTCC--A---TAGGGTTGCTGCTAGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3648581 711 + 145441459 -tggcccTTTGTTGCCCCTGTTTTTGGGTGCCTTGCTTCTGGTCCCTTTAGAACTTCTGTCATttgttgttgttgttgttgt---------tgttgttgctgtG-GCTTATTGCTCTTGCTGCAAGCCTGTGTCACCGCTTCCTCTGTGT---------------------------TGCAGTCCCAGCCACTTTGT---GGAGCGTGG---ATAAGGCCTCACCTTACTTA-AGGTGGCAGTGCCTGCCCAGAACCCTCCTACAGGCTCTTGGGACAAAGTGA-GCAGTGTAATAAGCTCTTGTTTAACATTCTTTCCTTCCCTGCTATAAAAAGAGGCTTCTCTGTGCTGATGGATATTAGA-----GCCAAGACTC----------------TAGAGTCAAGATCCTGAATACCTCCTGCAGGGTCCCTAGATCAGGGGTACTTAGTCTACTTCAG------TCTCCTCTATGGGGCTCTTTGCTGAGTTCTTTTGATGGTTGCTTCATCTTCCTGGAAA-----------------TTGCCTGCTGTATGGTGTGTCAGCTAA------TCCTCTGTTGAGAGTGCTGTGTGCGTGCTCTCTCTTTTTGATAGATC-----CTAAAGATATTTAAGTCCCCAC-AGTTTGAG--GTGCCA-------CCCATAGCTACCTCCCCACAAAGTGGGACCCTACAG----AGTTAATTTTTTAAATCCCTTTTCAG---AG--AAGGCACTAGCCCCAT---CCACTGTAGGTAGGCCTCTTTTTCTGAATCTGCTCCCTAATGCAGTATCC-CATGCTATGATTAGTATAAGT i mm10.chr7 I 756 I 329 s canFam3.chr1 19610211 522 - 122678785 GAGGTCTCTTGTTCCCCTG--------GCACCATGCTTCTCACTCCTTCAGGACT------------TGCCACAGT--CTGC---------TCCCCTCTT--GG-G----GTAT----------------------------------------------------CACCTCCCCCCTGAGCTGTGG------------------------CATG---CATCCTCTCCCTCC-GGGCTG---------------------------------------------------------------------------------CCCCTG-GGCAGTAAGAGGCATTCCTGTGTTG--GG-------------------------------------------GTCCTGGCCCT---CTCC-----CAAGCTCCC-AGGCCAAAGGCTCTT---CCATTTCAGTTTGG-TCCTCTCTGTGCAACTGTCTGCTAGGTGCTTCTCTG-GCTGCCT--CCTTTTTGGAGGGATCTTGTGTGGGGATCTGGCCCC-ACTGTGGTGTGTCGGCTGG------CCTGGGGCCGAGGGTGGAGC-------CATCATC--TGGGTTGGCTCTTAT-----GGAGATGTATGCTCCCTCAAGTCTGAGCTGTGACATCCCTCTCCCCCGCTCTTCAGTGTCCAGAATGGGCTCTCGCGGAGGATGCTGG-----TGCAGACAGCCTTGG---GGCCTTGGTCCTTCTCCAGCATACTCTC----AT--GCCCTGTGCTTT----CATACGT----------GTTCTCA---TACGCTAGCCGTTAGC i canFam3.chr1 C 0 C 0 a score=462741.000000 s hg38.chr19_GL949748v2_alt 116311 157 + 1064304 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagttcctccattacacttgccacatttcagatgttcagtggccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC s panTro4.chr19 59050296 157 + 63644993 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagtttctccattacacttgccacatttcagatgttcagtggccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55926543 157 + 60714840 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagttcctccattacacttgccacatttcagatgttcagtggccagcagata-tgtgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102692230 157 - 106955855 caaatgtg-gtgattagtaactagctaaaaatgaaaaattcagttccttcattacacttgccacatttcagatgttcagtgtccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59980267 157 + 64156825 cacatgtg-gtgattaataactagttaaaaatgaaaaattcggttcctccattacacttgccatatttcagatgttcagtggccaACAGATA-AGCATAAATAGAGTGTTTCCAGCATTGC--AAAGTTCTGTTGGAGAGCACTGTTTGCCAGATGTTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004982 157 + 59248254 cacatgtg-gtgattaataactagttaaaaatgaaaaattcggttcctccattacacttgccatatttcagatgttcagtggccaacagata-agcataaatagagtgtttccagcattgc--aaagttctgttggagagcactgTTTGCCAGATGTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47111257 157 + 51301725 CACATGTG-GTGATTAATAActagttaaaaatgaaaaattcggTTCCTCCATTACACTTGCCATATTTCAGATGTTCAGTGGCCAACAGATA-AGCATAAATAGAGTGTTTCCAGCATTGC--AAAGTTCTGTTGGAGAGCACTGTTTGCCAGATGTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46818448 154 + 50890351 cacatgtg-gtgattaataactagttaaaaatg-aaaattcggttcctccattacacttgccatatttcagatgttcagtggccaacagata-agcataa--agagtgtttccagcattgc--aaagttctgttggagagcactgTTTGCCAGATGTTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45394546 155 + 49145316 CACATGCG-GTGATTAGTAACTGGTCAAAGATGAAAGATT---GTTCTCCGTTACACTTGCCACATTTCAGATGCTCAGGGGCTGACAGATAGTGCACATGGACAGTGTTTCCTGCGTTGC--AGAGTGGTGTTGCACAGCGCGGTTGGCCAGATGCTCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19610733 134 - 122678785 ----TGTGTGTAATTGAAA------TAAAAATGCAAAGTTCTAGTTTTTCATAGT---------------GGTATTTAGAGAC--ATAGGTAGCATTTATAGGGAGCATTTCTGTCATCGTAGAAAGTGTTGTTGGATAGGGCTGTTGGTGAGGCAGTCCG i canFam3.chr1 C 0 C 0 e mm10.chr7 3649292 329 + 145441459 I a score=3495331.000000 s hg38.chr19_GL949748v2_alt 116468 1105 + 1064304 TTCTT---TGTGGGTGAGGACTCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGTTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TTCCC-TGCCCTGCACACGTAGAGTGGGAGCGGCCCGTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTTCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGGTATGTCTTCCCTTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTGAAGTTTTGGGTTCCTGCCCTGAT-GGTCTATGTCTCCCTGACTCTAAATTACCAATCCACTTGCTATG-GGATTCCTCCATGAGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AAGCCTTCTTGGTATTAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATGTCTTGGTGGTTTGAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGCATGAGCGGGTTCAGCTCTTCACAGCTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTTCTCCTACCTACAGCTTacacacacacac-acacacacacacacacacacacacacGCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGC--CCAGCCCCTCTGAGTAGGAAGTGTGATTTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTATTCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA s panTro4.chr19 59050453 1086 + 63644993 TTCTT---TGTGGGTGAGGACTCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGTTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TTCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCGTGGATCCCAGTGAACTGTGCTTTTCATTGTAGGCCCC-TCCCTGGAGGGGAAGA----GGGCAGTCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCCTAAGCCTCTCTTCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGGTATGTCTTCCCTTG------GACT-AAAGCTCCTTGGAGCTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTAAAGTTTTGGATTCCTGCCCTGAT-GGTCTATGTCTCCCTGACTCTAAATTACCAATCCACTTGCTATG-GGATTCCTCCATGAGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTATCTTCTCCCAGGTCTCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTATTAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGGTCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTATGAGGGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTGGTTTTCCCCCACCCCCAATCTTTCTTCTCCTACCTACAGCTTACACACACACAC-ACACAC--------------------GCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGTGGCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTATTCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55926700 1100 + 60714840 TTCCT---TCTGGGTGAGAACCCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGGTCCTCAGTATGGGGCTGTTTCTGTCTTTAAAGTAAGTGACTACTCCAGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----CGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTCCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTTTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTTAAGTTTTGGATTACTGCCCTGAT-GGTACATGTTTCCCTGACTCTAAGTTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCGAGGTCTCTCTTGGATACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGCTTCTTTGAGTTAGGAGTGTTATTTCCTTTGGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTATGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTT---CTACCTACAGCTTacgcacacacac-acacac----acacacacacacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGTGCCCAGCCCCTCTGAGTAGAAAGTATGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAACATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTTCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102692387 1075 - 106955855 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTACTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TGCCC-TGCCCTGCACAAGAAGAGTGGGAGCAGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTCCCCAGGGCTC---------GCCTGGTCTCGCTGTCAGGCCCTAAGGTGTGTCTTCCCCTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCT----AAGTTTTGGATTCCTGCCCTGAT-GTTATATGTTTCCCTGACTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATCGGCTCCCTCACAGCTGTGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGG--TCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTATCAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATGCA--CCCAT-CTGTATGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTTCTCCTGCTTACAGCTTACACACACACAC---------------------------ACCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCATCTCTGTGCCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAACCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59980424 1094 + 64156825 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTACAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAATAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCC-GGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGATGCTTCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCCTCTTATCTCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55005139 1094 + 59248254 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTACAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAATAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCC-GGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGATGCTTCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCCTCTTATCTCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47111414 1093 + 51301725 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTGTTCATTATAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAGAAGTCTTCT----GAGCATAAACCTCTCTCCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTAGGTTCCatgtaatttcctttaaaataaagatgCTCCTCTTTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATCACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAACTGTGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGTTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTATTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTTGCCGTcattttcccccacccccaatcttTCTTCTCTCACCTAcagcttacacacacacacaacacac------------acgcacacgcccTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46818602 1096 + 50890351 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGGTGCCCTGCCCTGCCC-TGCCCTGCACAAGTAGTGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTATAGG-CCCCTCCCTGGA-GGGAAGA----GGGCAATCTCCACTGGTATCTCAGAAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCCGGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGCTCCTTGGAACTCCCTTTTGACCTCGGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGACGCTCCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCATGTTTCCCTGAGTCTAAATGACCAATCCACTTGATACG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCC-------TCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGCTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acgcacacGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGCATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTGATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45394701 1049 + 49145316 TTCC----GGTGGGTGAGGACCCTCTTGGTGTGACTTTTCTCTGTATTGAGGCTCTTATTCCTCAGTATGGGGCTGTTTCTGCCTTTACGTTAATTGACTACT-CAGGG----------TGCCCTTGCCCTGCACTAGTAGAATGGGCACAGCCCCTGGATCTCAGGGAACTATGCTTTTCATGATAGGCCCCCTCCCTGG--GGGAAGA----GAGGAACCTCCGCTGGTGGCTCAGATGTCCTCT----TAGCATAAGCCTCTCTCTCCAGGGC------------------------------CCCTAAGGTGTGTCTTCCCCTA------GACTAAAAGCTCCTTGTGACTCCCTTTTGACCTCAGTCTCCTCTGGGTTCTATGGAACTTCCTTTAGAATAAAGATGCTCCTCTCTTTAAGTTTTGGGCTCCTGCCGTGAT-GGTGTATGTTTTCCTGGGTCTCTATCACCAATCCACTTGATACG-GGATTACTTCGTGTGTGCAGACCGGCTCCCTCACAGCTGCGGTACTTTTTCAGCCTC--A--TCTTGGTCAGATTTCTCTCTTCTCTCAGGTCTGTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT-----CATCCTTGGTATCAGCCTCTTTGGGTTAGGAGTGTTATTACCTTTTGGCTTAAGGATTCTGTTCTGGAATACATTTCTTGGTAGTTTAAGTCA--CTTCTACTTGGCATTCAGCGCTGT-CTGTATCAGTGGGTTCAGGTCTTCAGAGTTTTAGGCACCTCTGGTCTTCACTG-TTTCCCCCACCCCCAGCCTTCCTTCCCTCACCTACAGCTTACAGACACACAC---------------------------GCCCTTCTCTGTGAGCTGCCAGTTTCATTTGCCTCCTGACTTGTCTGAGGGGTGGCCTCTC------------CTGGCCACCTCTGTCCCCAGCCCCTCTGAGTAGGACGTGTGATCTCCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCTGCGTGACTTCGCTCTGCTCTG-AAAACCCTTTTGAGTGTAGTCTGGGGAGAAGGTGCTCCATGCTCTAGGAATTTTCCGCTTCCTGGGTC-AGAGGCACACAACGAAGTGTGTATCTTTTCTTGTTTCAACA i calJac3.chr22 C 0 C 0 s mm10.chr7 3649621 914 + 145441459 TCCCT---TGATGTTAAGGACCCTC--AATCTGGCTACCCTCCAGGTTGAAACCCTTGGTTCTGGTAGTGGAG------CTGCCTTTATAGTTAGGAGCTATATTGGGG----------CACTCTTGCCTTGTATCAG----------------CCTAGTTCT--GAGAGCCTTGCTTGATATTGCA-------CCCATGGGGGAGAAGGTTACATACAACTTGTGCTAGGAACTCATAAACCCTCT----TAG----GGTCTTCCTCTCCAGGATGC---------CCT--GTTTCGGGGTCAACTTTTGTAGTGTGGATTTCCCTGCCAACCGACC-TCCTCTCCTCAG-----TCCTTTGTCCTCAGGCCCTTCTGAATTAAACTCTGCTTCCTTCAGAATAAAAATAGGTGTCT---------TTGA----CCTCCCTGATGGGTTCATGTTT--CTGAGTCTAAATTGCCAGTCTATCTGATGTG-GAACTCCTCCATGTGTGCAGATCTGTTCACTCATAGCTAAGGTTCTT------CTCTTTA--TCTTTTTGAGATTTCTATCTTCTCATCGCCCTC-CTTGAGTGCTGCTTCCTGCTTCCAAGTTTCTATAGCCATTTTTAGTGTC---------------------------------------GGGCTTCTGCTGTGGAATAAATTTCTCGAAAGTGTAAGACC--CTCTTGTTTGATATCCTGCCTTGTCCTGTATGAATGGGCCTTGATCTTCATA-------------------------------------------TCTCTCTTCC----CCTTCAGCTCACAC-CTCTTAG------------------------------CCTTTCCAGGAGCTGCCAGCCTCATGTATTCTGTGACTTACCT--AGAGTGGCCTCTC------------TCAGTCACCTCTGCTCTCAGCCCCTCAGTTTAGAAAGTACCATTTCTAGGGCTAATGCTTCCAT-CCCAGCAGTCTACCTGTGTGCTGCTTG---------TGCTCT--------------AGTGTCATCTAGAGTGCAGATATTCTGTATTTTAGAAAATTTCTACTTCCTAAGTCAAGAGGCCCACCAATAAG-ATATACTGTTCTTTGTTTCAACA i mm10.chr7 I 329 I 117 s canFam3.chr1 19610867 844 - 122678785 -TCCTGGCTGTGGGTAAGGCCGCTCTTGGGCTTCCTGCCCT-----------------------------------------------------------------GGG----------CTCCC-TGCCCTGGGCCTG----------------------TCTCAGCCA------CACTTCAGGAGAGACCCCCTCTCTGGG------------GAGTGACCTC---------------------------TGGCATAACACTC---CTGCAAGGCTCGTGGATCCTCCCTGATCCTGGTGTC-GACCCTAAGTTGTGGCTT-CCTTG------GGCC-AGAGCTCCTGGTGGCTCCCCTTTGACCTCAGCGTCCTTTGGGTTGCATAGA----CTGTTAGGGTGAAGATGCCCCTCTCTCCTGGTCCTGG----CTG------T-GTTACCTGT--------------GTTACCACCACATCTGATACGTTAACTCCTTCGAGTGCACAGAT-GGCTCTCTCATAGCTGTGGTCCCCTTCCACCTTCCTG------------------------------GCCCTCCGGGGGTGATGCTTTCTACTCCCATGTGTCT--AAA---TCTTGGTATCGGTGTCTTTGGGTTGGG-----CCGTCTCTTGTGTTTTAAGGATTCTGTTCTGGAATGAA---CTTGGTGGTGTAAGGCCCTCTTCTGTTTGGGACCCAGTCCTGT-CACGACGGGTGGGTTTAGCTGTTCCTGATTCCAGGTATTTC---------CCATCTCCCGCTGCTCCCCCTCCTTCC-------CCTGCAGTTCTCACA---GCAT-CTGAAC---------------------TTTCTCCCTGAAAACTGTC--------------TCTGACCTGTCTGAGGGCTAACCTCCCCGAGTTAGGAGTCTAGACACCTGTGTGCCCTGCCCCTCTGTG-------------------------GGCCTTCATCCCCAGCACTC-AGCCATGGGCTGCTTGACT---TCTTGCTCTAAAATGTC--------TGTCATCTGGTGAGAAAGTATCCCGTGCTCTGGGTACTTCCCACTTCCTGGGTC-GGAGGTACACGAA-AAGTACATTTGTTTCCTTGTTTCAGCA i canFam3.chr1 C 0 C 0 a score=206362.000000 s hg38.chr19_GL949748v2_alt 117573 64 + 1064304 AACTTATGGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT s panTro4.chr19 59051539 64 + 63644993 AACTTATGGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55927800 64 + 60714840 AACTTATAGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCCTCAGGAGAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102693462 64 - 106955855 AACTTACAGGGTCCCCTGTTGGCCAGACAC-CATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59981518 64 + 64156825 AACTTATGGGATCCTCTGTTGGCCAGACAC-TGTGCTGGGCAGTCAAGTGAGCATCAGTAGAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55006233 64 + 59248254 AACTTATGGGATCCTCTGTTGGCCAGACAC-TGTGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47112507 64 + 51301725 AACTTATGGGATCCTCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46819698 64 + 50890351 AACTTATGGGATCCTCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45395750 65 + 49145316 AACTTCTAGGGTCTCTTGTTGGCCAGACACTTATGCTGGGCAGTCACACGAGCATCAGGAGAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19611711 57 - 122678785 AACTTCCAGAG--------TGTTCAGACCCCTGCAGTGGGCTGTCAGGGCAGCATAAGTAGAACT i canFam3.chr1 C 0 C 0 e mm10.chr7 3650535 117 + 145441459 I a score=10173211.000000 s hg38.chr19_GL949748v2_alt 117637 2801 + 1064304 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCTCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCAGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCACATGCTCCCTCTTCTGAGGACTGCTCTTTAGATACCTGCCACCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGC--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGGGGTCCTCGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcctgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAAATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCCCAAG-GGGCGGAGGCAGAGCGGCCAGACCCCAGAG-GTCCTCAAGAGAAGTAAGGTTTCTGCACCTAAGGGAAGTGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCGGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAAGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGC-GGAACCCTAGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--ATGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAACAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCACGC---GTGGGGCAGGAAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACCGTGGGGCCTTTGTGAAGAGGAGCGACTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGGCCACAGAGTAAAAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGACAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACAGACTTGCTGAAACCAGAAAGACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGGGTTGGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGAG----ATTTGGAACCAAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTAGGAATCTGGGCTCTCTCAGGGATAAATGGGTAGGGTT--GGGGGCCTAGTGATGACAGAT---ATCACAATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTGTTACTGCTGGAGCAGGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTCAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGATGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC s panTro4.chr19 59051603 2800 + 63644993 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCTCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCAGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCAGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCACATGCTCCCTCTTCTGAGAACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGC--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGAGTAGGGGTTGGGGGGG-TCCTCGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAACGCAAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagtttccgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGAAGGTCACCGGATTCTTGAGATCCCAAG-GGGCGGAGGCAGAGCGGCCAGACCCCAGAG-GTCCTCAAGAGAAGTAAGGTTTCTGCACCTAAGGGAAGTGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGC-GGAACCCTAGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAACAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTGGCAGCTGCACGC---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGACTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGGCCACAGAGTAAAAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGACAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCAGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACAGACTTGCTGAAACCAGAAAGACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGGGTCGGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGAG----ATTTGGAACCAAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTAGGAATCTGGGCTCTCTCAGGGATAAATGGGTAGGGTT--GGGGGTCTAGTGATGACAGAT---ATCACGATTCTAAACAGCAAGCTCCTCACAAATGGG------GATTATCATTGTTACTGCTGGAGCAGGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-CGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTTAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGATGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55927864 2787 + 60714840 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCCCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCGT-ATCTCTGGGTTTTTACCAGCCAGGGAATATGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGTGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGA-TGACTTCCTGCTGCACCTGTAGCCACGTGCTCCCTCTTCTGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGAGCACAGGAAGGTGGCTCAGGACCTCTGGGTGTTGACCAGC--AGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGGGTTCCTCCAGTCCCTAGC---ATAAGGAA--GAGTCACTGGA--------------GTGGGTGCTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAATGCGAACCAGAAAGAAAAGTATGAGGCTGACCTGAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGggg---------------cctgagggtagagggaactcggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcctgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGGAGGTCACCAGATTCTTGAGATCCCAAG-GGGTGGAGGCAGAATGGCCAGACCCCAGAG-TTCCTCAAGAGAAGTAAGGTTTCTGTACCTAAGGGAAGGGAAGAGACAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAACAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCCGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCCGGATTCCTCAGGCGGACA-GGGCCAAGAGCCGGGATTAGGGATTTGAGAG--AGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGAAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCATGAAGAGGAGCGATTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGACCACAGAGTAACAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACGGACTTGTCGAAACCAGAAAGACAGGGAGGGGAGAGACGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGTGTCAGGAAGTGGAAGATGACAGGGTCAGGTGTCAGACCCTGAGGGGTTTGCGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACCGAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGAAGCGAGGCTTATGAATCTGGGCTCCCTCAGGGATAAATGGGTACGGTTG-GGGGGCCTAGTGATGACAAATATCATCACGATTCTAAACAGCAAGCTCCTCACGAATGGG------GGTTATCATTGTTACTGCTGGAGCAAGTCGG---AGGGGATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTCAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCAT-CTGCCCCACCCC-GAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102693526 2803 - 106955855 GGGTCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCCCCTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCCTCTGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGCAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGG--TCCTTGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCAT-CCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCCTGAGGGTAGAGGGAACTGGGAGAGTGGACTGCTGGGTCCCAGGGAGAAGGAGCTGTGGG------------CCCCAGTTCCCGGGTCCTGAGG---TCTGACTTTCTTGTTTTT-CCCATCTGCAGCGGCTAAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTAGGGAGGTCACCAGATTTTTGAGATCCCAAG-GGGTGGAGGCAGAGCGGCCAGACCCCAGAG-TTCCTCAAGAGAAGTAAGGTCTCTGCACCTAAGGGAAGGGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCGGGTCCGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACTTTtgggatggggatgggcgtgggaatgggctggccaGCAGGAG--GCCAGTCGTTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGAGCAGGGAGGGGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGAGTAGACAGTGGGGCCTTCGTGAAGAGGAGTGATTTGGGGGAAGGTGAATGCAGGTTGAGTTTGGGCCACAGAGTAAGAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCAGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACGGACTTGTTGAAACCAGAAAGACAGGGAGGAGAGAACTGGGTCCACAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGAGTCAGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACCGAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTATGAATCTGGGCTTCCTCAGGGATAAATGGGTAGGGTTGAAGGGGCCTAGTGATGACAAATATCATCACGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTGATCATTATTACTGCTGGAGCAAGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCAGGCT-CAGCTGAGAAATCTGGGCT----------GTCA-GTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGA-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGCTGGCGTGGAGG---TT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59981582 2801 + 64156825 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCTTCGGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTAACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATAGGCTCTAAGACTCATTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCAGTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcccagttcccggatcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGACAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTTGGGA------------TGGGGATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCAGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGCGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAGGA--CGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTCTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTCGCTCCCGCTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATACCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTATGCCAGAGGCAGT--CAG-TGGTGGGCAGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTACAGAT-GAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCTACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCTACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55006297 2801 + 59248254 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCTTCGGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTAACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATAGGCTCTAAGACTCATTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCAGTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGggggctgggggcctggacgcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGACAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTTGGGA------------TGGGGATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCAGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACGGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGA--CGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGCTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGTTAC---------------AAACTGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTCTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTCGCTCCCGCTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATACCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTATGCCAGAGGCAGT--CAG-TGGTGGGCAGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTACAGAT-GAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCTACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCTACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47112571 2794 + 51301725 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATGCGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTTTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTACTGCACCTGTAGCCACGTGCTCCCTCTTCTGAGGACTGCTCTTTAGATGCCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATCGGCTCTAAGACTCACTgggggtaggggttgggggg--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGACTGGGGGCCTGGACGCCTGTGTCCTGAGGGTTGAGGGAACTGGGAGAGTGGACTGCTGGGTCCCAGGGAGAAGGAGCTGTGGG------------TCCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCACCTGCCAACTA-CACTCTCTGCAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGgagggcctgggcctggcccagaagGTAGATCCTGcccagaaggagaaggaagaggttgGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTAAACTCTGAGGATCCTGAGCCCTGGGTGTAGGTGGGAACCCTGGCTGATggctttcctcttc-ctctccctcccctagaaTACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTtgggatggggatgggc-tggggatgggctggCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATCGGGAGGGCTTAGCAGCTGcctgg---gtggggcagggaggaggtcAGACAAAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGTGATTTGGGGGAATGGGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAAGA--CACTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTAGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-AGGGTATGAGTTCAAAGGGATAC---------------AAACTGTATGGACTTGTTAAAACCAGaaacacagggaggggagagcTGGGTCCTCAGGGAAGCTGTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCCAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTTGCTCCTGCTGGGATAaatgggtggggttg-ggggaccTAGTGATGACAAATATCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAACCTGG---AGGGTGTCCGTATGCCAGAGGCAGT--CAG-TGGTGGGC--------------------GGGCTCAGTTGAGAAATCAGGTGAGGTGCAGATGGAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGtgtgggaagaggaaggagcagaGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCtccacaggggtcagggactgaGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46819762 2810 + 50890351 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTT-CTACTGCACCTGTAGCCACGTGTGCCCTCTTCTGAAGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTAC-GGGGCTGAGACCCTAATCTTATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGAGGTTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTGCATATTGCAGATGCTGAGGACCTAAGAGAATCGGCTCTAAGACTCACTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCACTGGA--------------GTGGGTATTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCGTCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTgagggg-ctgggggcctggacgcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCC--GAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGTCCCTTAGTCAGCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAAGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGT-GAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTCtgggatggggatgggcatggggatgggctggTCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCCGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATCGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCCGGGAGGAGGTCAGACAGCATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCATAGGGTAAGCATGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAGGA--TGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AGATCGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAATCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGAGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTTGCTCCCACTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATATCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGC------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTGTGCCAGAGGCAGT--CAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTGCAGATGGAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45395815 2768 + 49145316 GGGGCTGGTCTCTTGTC----------------AGCGGAGGTTTCTTCTCTTTACCATTCCCACCCACCTCACTATGCTGACTAGGTCCCT-GGCTCTGGGTTTGAACCAGCCAGGGAATACATGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGACAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTA-----ACTTCCCGCTGCACCTGTAGCCACGTGCTCTCGCTTCTGAGGACTGCTCTTTAAAT-CCTGCTGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGCGGCTGAGGCCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAACAGGCTCAGGATCTCTGGGTGTTGACCAGGGAGAGAGGGGCTACATA-TGCAGGTGCTGAGGACCTAAGAGAATCAGTTCTAAGATAGACTGGGGATAGAGGTGCGGGGG--TCCTCGAGTCCCTAGC---AT-AGGAA--GAATCACTGGA--------------GTGGGTACTGGGGCATCCCCTCCCACACTGACTTCTGAATTCTCTCCATCCCTCAGCTCCATAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGcctgtgtcctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcccaggtactgagg---TCTGACTTTCTTTCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCCAATGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGATCCTGAGTCCCAGAGCGG--GGGAGGTCACCTGATTCTTGAGATCCCAAG-GGGTGGAGGCAGAGTGGCCAGACCCCAGAG-GTCCCCAAGAGAAGCAAGGTTCCTGCACCTAAGGGAAGGGAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGGCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTCGAGAG-CCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAGCGGTTCAAAGTTGTGGAGCGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTGGACCCTGCCCAGAAGGAGAAGGAGGAGGTCGGCCAGTGGCTCACGGTGAGTTGGGGCAGAGAAGAGGAGGTGAACTCTGGGGATCCTGAGCCCCGGGCATACCTGGGAACCCTGGCTGATGGCCTTCCTCT----TCTTCCTCTCCTAGAATACCATTGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCTGG-CGCCTTTGGGAAGGGGGTGGGGATGGGGACGGGCTGGCCAGCAGGAGGTGCCAGTCATTT--AGGCTCCTGGGAGTTGAATCCTGGATTCCTAAGGTGGACAGGGGCCAGCAGCTGGGATTAGGGATTTGAGAGACACGATCGGGAGGGCTTAGCAGCTGCCTGG---GTGAGGCAGG-AGGAGACCAGACCGAATTTCAGGGTCCCCTGGGTGTCTAGGTAGGCAGCAGGGCCTTGGTGAAGAGGAGCGGTTTGGGGGGAGGTGAATGCAGGTTGAGCTTGGGCCCCAG---AAGTGTGAGACCTGTAGGAC-ACCCATGGCAG---------------GAAGCTTCATGGCACCCAGAGGG--CCCTGGTCCTGGGGAGAGCACAGT---TAGAGACAAGGCAGAATCTGGAGAAAGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGCTGGGATCCCAGGTTCTAGA-A-TCCAGGATTGT-GGGGTGTGAGTTCAGGGGGATACTTGTTGAAATCGGGGAAACTATAGATACTTGTTGAAACCAGAAAGACAAGGAGGGGAGAGCCAGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGATGATGTCAGGGTTGGGTGTCAGACTCTGAGGGGTTTGGGAACCATGGGCTTGGAGAGGAGTTGTTGGGTCCTTGGACAGAGCAGGG----ATTTGGAACCGAGGCTAAGTTGTTAAATCGTAGAGAGTCCTTGA-----GGGGAGGGCAGGATCGAGGCTTATGAGTCTGGGCTCCCTTGGGGATAAATGGATAGGGTTG-GGAGGCCTAGTGCTGACAGA-ATCATCATTATTCTAAACAGCAAGCTCCTCACAAATGGC------GGTTATCATCATCACTGCTGGGGCAAGCCGG---GGGTGGG--GCATGCCAGAGGTAGTCACAGCCGGTGG------------------------------------------GTGAGGTGCAGGTGGAGGCCAAACCGTAGGATGGCACAGGGACCTCT-GGGTCGTTTAGAGGTTTCCAAGAA---CTGGAGCCAGAAAGGTCTGGGGAGAGGAAG-----GAGCAGTGGGATCCCAAGATGTCAGAAGTCTGAGA-TTGCTCTCACAGGGGACAGAGGGTGGGTGGACCCCATACTGGCCCACCCCAGAAGGGGCTGGAATGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAGAGAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i calJac3.chr22 C 0 M 1562 s mm10.chr7 3650652 2539 + 145441459 AGGCCTAAGCTC-TGTCAGGTGAGGGAAGAGCAAGTTAGTGTCTCTTCCTTCTACT--CTCCTACTACCCCTGATTCCTATCCACATTCAT-GACT-TGAGTTTGCACCAGCCCAGGAATGGATGTTAAGTCTATCCCAATTGTTCCCAGCAGCGGCCATTTTCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTA----ATCGACTGTCTACTGTTCATGTGGCTACATGCCCTTCCTTCCGGGAA---TTCTCTGGATATTTGCAATCTTGGCAAGATCCTAACAGTCTTA---CTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAAGGGGTGGAGCAGTTTGAAGATATTTGGCAAAAGGTA-AGGACCTAGGAACCTTA-A--ATTTTGTTGTCTGTAGGGCAAAGAATCAAGAAGAGGTTCAGGGCCTTGGGGTCTTGACCAGG----------------------------------------GAAGCATCTCTAAGATCGATTGTGGGGA-------GGGGG--TCCTAGATTTCCCAGCCGAGGAAGAAA--GAG--ACTGGACCTTTACAGCTATGGCGAGTTCTGGG-CAGCCACTTTCACATTGACTGCTGAATT--CTTCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGA--TGGACTCTTGTGTCCTATGGGAGGAGGG-ATGGAGACAGTGGACTGCTGGGTCCCAGGGAGAAAAGGTCATTGAGGACCCCCCTCCCCCCAGTTTCCAGGT-CTACAA---CCTAATTATCTTGCTTTT-TCTCCCTTCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGGTTAGAAACCAGAGCCTGGGGTTCTTTGGGGTGGGAATATGGTCAGGCTCCTGGGACCCAAAGAAGGTGGAGGTGGAGCAGTCA----CTAGAGAGTCCTCGGGAGGAGTATTGTTTCCACAACTAAGGGAAGGGCAGA--------AATGAGGGCTCAGG------------------CTGTTTCTAGCAT-TGCTGGCTCTTA--TAGCTCCTTTTCCATCTTTGAGCA--CCTCTGCCAACTATTACTCTTCACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCGTATAGCAAGGAGGGTCTGGGTCTGGCTCAGAAGGTGGATCCTGCCCAGAAGGAGAAGGAAGAAGTTGGCCAGTGGCTCACGGTGAGTTGGGACGGAGAAGA--AAGTAAGCACTTGGGCCC---AGACTTAAATATATACCAGGGCCTTGA-GGACAAACCT-CTCTTC-CCTTCTCTTCCCCAGAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATGTGAGTGGTGGGGGCACCATCACCCACAGGGTAAGGG------TGGAGGTGGCCT-GTGAACAGAGG--G-----CATCTGGAGGCTCATAGGAGTCTGGTCCTGGAT-----------ACA-----------CCTGGGGCAGAGATTGAAAAGGCAGAACAAGGCAGCTT----AGCTGGCTGAGTTGTGGTATAGGGAGGAAGTGAGAGAGGATATTG---------GGATATTTGGGTAGACAGTGTAGCCATTGT---TAGGGGCAGTTTGGGTGAAGATGGACTTAGGTTCAGCTGGCACCACATA------GTGAGACCTGAAGAAAGGACCAAATTGG---------------GAAGATACACAGCACTCCAAAAATTCCCAGGATCTCAGGAGGG---GGTTGGTATGTCT--------------------CTAAGAACCAGTTGCTGTTGGAAACCTGGAAATGGTTTGGGCCAAAGTCATATGATAGGGTCCCGAATCTTACACC-TTTAGGATTGTAAGGGTGTGAGTTCAAAGGGATGT---------------CGACTCTGTCTCGTTAATGGTGTCA-----CCAGGGAAGGAAGTTCTGA----------------TGGGATGGAAAG--------AAAGAAAGATGTCA-----------------CTGG-----------------------GAGGGAAAAGAGTAGATCCTTGATAAAAGGAGGA----ATTTGGAGCTGGCACTAAGGCATTACGTTGTGAAGGGAATTGGAACCTCGAGAAGAGCAGGAGC------------TCTCTGTGGCTGCCCTGATAAACGG-----------------------------------------------ACAGCCAGTTTCCTTCCCATGGACTCTACCTTTATCACTATCATTACCGTTGC--GCTGAGATAGGATGTCTAT-TTCCGGCAGAGGTCAGAA-TGGTGGG-AGGCC-TGGGTAAGACTT----GCT----------GACAGGTAAG--CCAGGCAGAGGCCAAGTTGTAGGGTAGCGCAGGTA-------------TTACAGGTTTCTAGGGATCTTTAGAGCCAAAAGGGTTTGAGGAGA----------GAGAAATGGATCCTTGAGATGTCAGAAACCTCAGATTTGTCCTCACTGGG-ACAGAGGATGGGCAAACTTCTCACTGGCCCATGTT-AGGAGGGCTGGAGCAGAGGCACCC-TTGGGGTGCCCTAGTGATGGGGGACTGAGGACAGGTTCTGTGGGGGCAG-GA-GGGCT-GGCCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i mm10.chr7 I 117 C 0 s canFam3.chr1 19611768 2368 - 122678785 TGGCCTCATCTCTCATCAGAG------------AGTGAACGCATCTTCGCTTTACCA-TCCCATGTATTC--CTGTTC---CCAGCCCCGTCATGTTTGTGTTTGGAACAGACAGGGAATAAACAT--GTCCCCCTTCCTTGTCTCTCAGCAGCGTCCGTCTCTAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTGGTCTCCCTGCCCACTGCCTGTGTGGCCTCGTGCCCACTATCCTCAGAACTCCCCACTGGGTGCCTGCTGCCTGGGCAAGGTGCTAATAGCCTC--TCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAACAGTTTGAGGATATTTGGCAGAAGGTACAGAGCCTGGGGCCTTAACA--GTCTGGGTCTTAGAGGAGAAGAGCATGGGAA-AAGGCTCAGGGTCTCTGGGTGTAGGCCAGG--GAGAGGGGCTGTGGG--TCTGGTGCTGAGGAC--GGAAGGAGCAGCTCTGAGACAGATGGGGG--------TGGGGGC--ATCCATACTCCTCAGA---GGCTGGAGCTTCACCACTAGA--------------ATGGGCACTAGGATGGCAAGCCCCACACTGACACCTGGGCTCCCTTCATCCCGCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAAGCTGATCTAAAGAAGGAGATTAAGAAGCTTCAAGTGAGGGGCCTAGGGGCCCGGCTTCCTGCATCCTGAGGGCAGAGGGAACAGGGAG-----------------------GAGGGGGCTGGCAG------------CCTTGGTGCCCAGGTCCTGAGGCAATGTGAC--TCTTGCTTTTCCCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCCAACGAGATCAAGGACAAGAGGCAGCTCATAGACAACCGCAAACTCATTGAGACGGTAGGAGCTCAGAGCCTG-GTACCTGAGAGGTGGG-AGGTGGCCGGACTCCCTGGG-CCCAAG----------------------------AAG---TCTCTGGAAGAGGATGGTTTCTCCAGCAAGGTTAAGGGGAGAGGTGATGGGCTGGGA------------------------------------------------------------------------------TCTCCTGCCAACTG-CGCTCTCCACAGCAAATGGAACGGTTCAAAGTTGTGGAGCGAGAGACCAAGACTAAAGCCTACAGCAAGGAGGGCCTGGGCCTGGCGCAGAAGGTGGACCCTGCCCAGAAGGAGAAGGAGGAGGTCGGCCAGTGGCTCACAGTGAGTCAGGAAAGAGAGGAGGAGGTGACCTTTGGGG-CCCTAACCTCCAGGCATCCACGGAGACCT--GCTGACCAGCTGCCTTTCCACTCCCTCTCCCCCAGAACACCATTGACACCCTGAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCTGTGCAGACGCGCAAGAAGAAAGGTGACAAGGATGTGAGTAGGGGGGACACTG-CACCCAGGGGA------------CAGAGATGAGCTGGCGAGTGGGAG--G-----CATGT--GGCCCGTTGGG------------------------------GG----------------------------------------------TAGCACCTGTCT-----GTGAGCCAG------------------TGTCAGGGCTCCA-----GCCTTGGTCAGCAGTGGCACCATGGAAAGGGGGAGTGGTTTGGGGGAACATGC---TGGGTTCTGCTGGGGTTGCAGACTAG--GTGAGAGCAGATAGCC-ATACAGGGTGGAGAAGTCTGAGAGCTGAAGCCTCCTGGCTCCGAGAAGG--CTCAGGTCCTGAGG------CAGTAAGGAGAGGC-AAGCCTCATTTGG-----GCTGAGAA--GAGC-C-------------------ATCTAGGGCAGAGCCAGCT-CTAGGTTCCCAGATTCCAGA-ACTCCAGGGCTGA-AGGGTGTGGATTCAGGGGGATGC---------------AAACGACATGTACTTGATGG---------CAGAGGCAGCGGAGAGCTGGGTCCAGGGGCAGG--GGGCATGGGAGAGG----------------TGCCCAATCTGGGTGTCAGACTCCGAGGAGTTTGGGAAGCTGGAGCCA----------CAACAGGTCCTTGTGGAAAGGATGGGGATATTTAGAACTGAAG-----------------GAGGGGCAGGTGG-----CTGGAGAGCCCGAGCCAAGCTACTGAATCTGGACCCCT----------AGGGGTGGGGATT----------GTGAGGACAAAGATGACGGTGGTCATAAACAGCAAGCTTGCTGCAAACAGG------CATCATCAT--TTGCCGTTAGAGCAAGATGG---GG-------------------------CGG-GGTGGGGTAGGCTGCAGTTGTGAGATCTGGGCT----------GTC--GGGAGCTGCAGG-GAGGGCCACAGTGTAGGA-GGCATGGGGCTTTCT-GGTCTGTTGGGAGGTTTCCAGGGATGTCTGG------------GTGG---------------GAGCTGAGGGTCCTTGAGGGGTC--------------------------------GGGGCGGGCAGACTCCACACTGCCCGTGCCA-GGAGGGGCTGGAGTGGAGC---CTCCTGCATCTCTGCAGGGGTCGGGGACTGAGGACGGGTTCTGCGGGGGCAG-GAGGGGCCTGGGCAGGTGCCCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i canFam3.chr1 C 0 C 0 a score=789135.000000 s hg38.chr19_GL949748v2_alt 120438 193 + 1064304 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGACGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA s panTro4.chr19 59054403 193 + 63644993 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGACGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55930651 193 + 60714840 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTATCACGTGCGCATGTTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGATGCCATCCGCAAGATCAAGGACGACGGTGAGTACTATGTTGACTCATCCCAGGACCCTGACTTCGAGGAGAACGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102696329 193 - 106955855 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGATGCTATCCGCAAGATCAAGGACGACGTCGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59984383 193 + 64156825 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55009098 193 + 59248254 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47115365 193 + 51301725 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46822572 193 + 50890351 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3653191 193 + 145441459 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCATATCGAGAAGCACCGCTACCATGTTCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTGGTTGATGCCATCCGCAAGATCAAGGATGATGTGGAGTACTACGTTGACTCATCCCAGGACCCCGACTTTGAAGAGAACGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19614136 193 - 122678785 GCCAGCAGAAGCAGGACCGGATTGAGGGCCTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTGGAGACCATCCTGCGCATGCTGGACAACGACTCTATCCTTGTTGATGCCATTCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCGTCCCAGGACCCTGACTTCGAGGAGAACGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45398583 1562 + 49145316 M a score=3643538.000000 s hg38.chr19_GL949748v2_alt 120631 1023 + 1064304 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAATGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCTCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacgcccacctcaaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGACACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTATGGGAGCGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACGCTAAGGTCCTATATCTGGGTCCCTAAAGGACATAAAGAGCAATAGGGTGCATCCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAAGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAAGACTGGAGAGCCTGAATTGAGATGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGCTCTGGGGCCGCAATGGCAGTCAATTGGGCCCAGGT-----------------------CCCCGGGGCATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGACCGGGTGGGCACGCCATTCACTCCTCTGTTGCTTCCCAAAGGCATCTTGAGGCCTGAGCGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGCTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag s panTro4.chr19 59054596 1023 + 63644993 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCGGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCAACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGACACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTATGGGAGCGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACATGCTAAGGTCCTATATCTGGGTCCCTAAAGGACATAAAGAGCAATAGGGTGCATCCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAAGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAAGACTGGAGAGCCTGAATTGAGATGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGCTCTGGGGCCTCAATGGCAGTCAATTGGGCCCAGGT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGACCGGGTGGGCATGCCATTCACTCCTCTGTTGCTTCCCAAAGGCATCTTGAGGCCTGAGCGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGCTCAGAAATCAGTGCTGCCCTGAGGGCAGGTGGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55930844 1021 + 60714840 GTTTCTCTATGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGACCCACGGGGCACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCCAGGGGAGAGTAATTGAGGAA--ACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGGTCCTACATCTGGGTCCCTAAAGGACACAAAGAGTAATAGGGTGCATTCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAGAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGTTCTGGGGCCACAATGACAGTCAATTGGGCCCAGTT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGAATGGGTGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATATTGAGGCCTGATCGCTGGCCACTGTGCTGGGCTGGTGGACTTTTTTGGGTCAGAAATCAGTGCTGCCCTGAGggcaggtgggcag i ponAbe2.chr19 C 0 I 502 s nomLeu3.chr10 102696522 1023 - 106955855 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCGCCGAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacgcccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGTGCACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGGTCCTACACCTGGGTCCCTAAAGGACATAAAGAGTAATAGGGTGCATCCCGTGCCAGTTGAGGCCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTGGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAACACAAGAACATTGGAGAGCCTGAGTTTGGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAATGGCAGTCAATGGGGCCTAGGT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGGTGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATATTGAGGCCTGAGTGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59984576 1010 + 64156825 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGTCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTATATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCT--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAGGGCAGGTGGGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55009291 1010 + 59248254 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGTCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacacccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTATATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCT--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47115558 1010 + 51301725 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTccccccccAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGGGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAAATCCTACATCTGGGTCCCTAACGAACATAAAGAGTAATAGAGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGtcagctgggcccaggg------------------------cccgGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAGGGCAGATGGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46822765 1009 + 50890351 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacacccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGGCACGA-TACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTTGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTACATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCTTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTTGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGCGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGTGTGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45400145 1019 + 49145316 GTTTCTCTATGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGTGGTGA---TGGTGGCACAGGA-AGTGAGGGCCCAGAGCAGGC--TGTGTGAGCCAGCTAAGCATGCCCTCCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCTCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCAGAGCGCACTAGTACCTCGTGTTTCTAGCAGGGCAGGACTTGAGGAG--AAATCTGGGTTTCTCCAAAGTGACCAGGGGAGAGTAGTTGAGGAAACACAGATCAAGGTAGCCAGGGTCTAGGCTCTT-GGAGCACACGCCAGGGTCCTACATCTGGGTCCCTCAAGGACACAAAGAATAATAGGGTCCATCCTGGGCCAGTTTAAGCCCTGGAT-GTGGGAGGCGGCAGGGGCCAGTGCCGGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTGGGATTCCCTGTGGACAGCAGGTTCCCAGATCCTTAGGAGGCTGGTGGCTCAGTGCTGGCTCCCAGAAAAC---AACATTGGAGAGCCTGAATT-GGGTGGTTTCTCCAGGCAGATTAAGGACAGCCATGTTTGCCCAGCTCTTGGGCTGCAGTGGCAGTCACCTGGGCCGAGGT-----------------------CCCCGGGACATTGAGAGATGAGTATTTCTCTGTCAGACCCCCAGATGTCATGCAG-GTTTCTA-TTCCACCTTCCCTCCCTCAGGAAAACTCTGAAGATGACAAGAAGAGGGGGCGTTCCACAGATAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGAATGGACGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATACTGAGGCCCGAGTGCTGGCCCCTGGGCTGGGCTCGTGGACACAGGTGGGCCAGAAAGCAGTGCTGCCCCAAGGGCAGGTGGGCAG i calJac3.chr22 M 1562 C 0 s mm10.chr7 3653384 951 + 145441459 ATTCCTCTATGACGACCTGGACCTCGAGGACATTCGTGAGGCCCTGG-GCTGACCTTCATGGCACAGAG-GGTGAGGGC----AGGAGGC-ATGGCTGTACCAGCTAAGCATGCTGCTCCCCTACCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGACGAGATCTTCAACCAGTCTAGCAGTACACCCACCTCAACAACCTCCAGCTCTCCCATCCCACCCAGCCCAGCAAACTGCACTACGGTAAGTGTCCAAGGT--------------TATTAATAAGAGGGTGGTCATGGAGGAGTCAAA---AGCCTAGTCT----TGCCTTAGAGAGGGCAGCTCAGGAAGTG-AGCTCTAGGCTT------TTTGTGCTCTGAGGAACGGATATAAAAA------ACCTGGGTTTC---------CACTCAGTTTTAGGGTGCACA-----------TGGGTCTTTGGTGGTGGTAGTCAGGAGGAGTTGGGGTGTGGAAAG-CTGAGGA-GCTGAGCAGCTGGGTGTCTCCCTTCTGACAGGGATCC-GGGGCCAAAGTCTATAAGGAAAGAAG--TCCTGGGTATGTCTCAGGATGG-GAGTGAGTGCTGACTCTCAGATT-----------------------TTTAGGTG--TTAACCAA--AACTTCAGGCTGAGT--ATTGGAGCAGCTCTGGAGC-ACAGGGCTACTCAGATGGGTCTATGAGAGACTGAGAGTAGTAAGGGCCCTCCTGTGTCCTTAAAGGATTGCC--CTCTGTTTTGGGACCCTGGAGGTCACAGAGTTTTTTTA-CTTCACTTCCCCTGCCTCAGGAAAACTCTGAAGATGATAAGAAGAGAGGCCGATCTACAGATAGTGAAGTCAGCCAGGTGGGTCCAAGTCTAAATCTGATGGTT-TGTAACTTGTTTATTGCGTGGTCTCCAAAGTTAC--TGAAGCTGGAGGGTTGGCCACGATGCTGGGCTCTTGGG-ACAGGTGTGCCAGAAA-CAGTGCTACTCTGAGGGTAGG------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19614329 738 - 122678785 GTTCCTCTATGACGATCTGGACCTCGAGGACATTCGTGAGGCCC-GGGGTTGGCC-TACGGGCATGGGGCAGTGAGGGC-CAGGTGGGACGGTGCCCGAGCCTGTTCAGCATGCCCCTCCCTGCTCCCAACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGTCATATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCACCCAGCCCGGCCAACTGCACCACGGT-------------------------------------------------GAGGAGGCA--------------------GCCCAGGGGAGGGGAACCAAGGAAGTG-GGGTCTTGGTGTCACGGG---------TT-GGAGC-------------------------------------------------------------------------------AT--------GCGGCAGAGGCCAGGCAGTGGG---------------GGGTGGCTCA-------------GGCAGGGATCC-AGGACTGGATTCCCTGAGGAGAGCAGGCTGCCAGGCCTGTGAGACGCTGGCAGG-GGGTGCTGGCTCCCAGGAGACAAGGACCCTGGG-------------------TCCCCCGATGAGGTTAAGGGCATAG--GTC---------------CCGCAGCAGC------------------------------------------CCTGGGAGCTTCAGAGATTGGAG--TCTCTGTTGGGGCCCTAGGGGTCACACAG-GTTTCCGACTGCTCCTCTCTCACTTCAGGAAAACTCTGAAGATGACAAGAAGAGAGGACGCTCAACAGATAGCGAAGTCAGCCAGGTAGGTGTGA------------CGGGCACATCAGTCTGCCATTGG-----CTCCCAGGGCTCACAAAGGCCTGAGTGCACCCCA---------------------AGGAAGGCCAGTA------GCCTTACTTAGGGCAGGTGTGGAG i canFam3.chr1 C 0 C 0 a score=613169.000000 s hg38.chr19_GL949748v2_alt 121654 227 + 1064304 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTAGCACACAGGTCACCCTTGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGTTT-----------------------------------------------------------------------------------------------GGAAGTGAGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCA-GGGCCCAAC------ s panTro4.chr19 59055619 226 + 63644993 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTAG--CACAGGTCACCCTTGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932367 226 + 60714840 -GGCAGGTGGGCAGGGGACTGGTGCTGTGGTCAAGGGGGTAG--CGCAGGTCACTCTCGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGGGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i ponAbe2.chr19 I 502 C 0 s nomLeu3.chr10 102697545 226 - 106955855 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTAG--CACAGGTCACCCTCGGCCTGGCC-----AGGCAGTCAGGAGAGGCTGCTGTGGAG-------TGCCCTGGGCCTCAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGGTGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985586 224 + 64156825 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGCGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCTGGTGTGCAGGGCCAGGGCTCCAAC------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010301 224 + 59248254 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGCGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGCTCCAAC------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116568 224 + 51301725 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCTTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGGTCCAAC------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46823774 224 + 50890351 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTACTGTGGAG-------TCCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------AGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGGTCCAAC------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401164 309 + 49145316 --GCAAGTGGACAGGTGACTGGTGCTGT-------GGAGTAG--CACAGGGCACCTCCAGCCCGGCC-----AGGCAGTCAGGAGATGCTGCTGCAGAG-------GGCCCTGGTTTTCAGAGTCAGGT----GTTTGCCTGGCAGGGAGAGGCAGAAG-CAGTAACACAGGCAGGTTG-GACAGAAAGCTCAGGAGTGTGGAGAGATGAGGGAGTGCGGGGAGACGCAGAGGAGCGCGGGGAGACGGGGGGGCGGCGGGGGGAGACGAGGTAGTGTGGAGAGAGGAGGAAGTGTGGAGAGATGAGGTGGGTCAGGTCTGTGGGGCCAGGGGCCCAAC------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3654335 120 + 145441459 ------GT-----GATGACTGGTGGTGTGGTT---GAGGTGG-----------CCTGTTGTCTGGCTTATAGAGGAAGAC--TAGGTGGTACTGTGG-------------------------------------------------------------GCAGGTCACACAGGGAA-CTGTGGCAAGAAGTTA-----------------------------------------------------------------------------------------------GGAAGTAT-GAGAGGTGG--------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19615067 215 - 122678785 GGCCAGGCAAGCAGGTGGCTGGTGCTGTGGTTGAGTGTGTGG--CATGGAGTA---GTGGCCTGGCCT----GGGTGGTCAGGAGACATTGCTCCAGAGAGACCCCTGCCCGTGACGTGGGGGGAAGACTATGGTTTACCAGGTGGGGAGAAGGGGGCG---------------------GGCAGACAGGTG-----------------------------------------------------------------------------------------------GGTGGTGTCCAAAGATGA--CCCACCTGGCT--CAGGCCGAGGGTCCCGCCCCCCAC i canFam3.chr1 C 0 I 99 a score=285356.000000 s hg38.chr19_GL949748v2_alt 121881 91 + 1064304 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCCAATAAGCCTAGGAAGCGAT s panTro4.chr19 59055845 91 + 63644993 TGTGAGCGCAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932593 91 + 60714840 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102697771 91 - 106955855 TCTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985810 91 + 64156825 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGCCAAACAAGCCTAGGAAGTGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010525 91 + 59248254 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGCCAAACAAGCCTAGGAAGTGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116792 91 + 51301725 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGCGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGATCCAAACAAGCCTAGGAAGTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46823998 90 + 50890351 TGTGAGCACAGGGACTGGGACTGTGAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGCGGCCTCCAGAGCCAAACAAG-CTAGGAAGTGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401473 91 + 49145316 TATGAGCACAGGGACTGGAATTATCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGCAGCTTCTACTGCCAAACAAGCTTGGGAAGTGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3654455 57 + 145441459 -------------------GCTGTTGGACTGAG-------GACTCTTTGGTC--------TCTTGAGGACCCAAATAGCCTGAGAAGTGAT i mm10.chr7 C 0 C 0 e canFam3.chr1 19615282 99 - 122678785 I a score=1903203.000000 s hg38.chr19_GL949748v2_alt 121972 636 + 1064304 GGG-----------GCCTTTGCTGTGCTGATAATACACACTGCAAATTTCTGAGAGGAGACGGTGGCGGGCAGTGCTTCT----------------------------TCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAACAATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCGCAGGTAGTAGTGAGGGCGGGCAACAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATGCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGTGGTTAGGCTCAGCAGCCGGAG-TGCTGTCCACAGATTGCCTGCGGTAGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGCTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC s panTro4.chr19 59055936 636 + 63644993 GGG-----------GCCTTTGCTGTGCTGATAATACACACTGCAAATTTCTGAGAGGAGACGGTGGCGGGCAGTGCTTCT----------------------------TCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAACAATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCGCGGGTAGTAGTGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGTAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATGCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGTGGTTAGGCTCAGCAGCCCGAG-TGCTGTCCGCAGATTGCCTGCGGTAGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGCTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932684 633 + 60714840 GGG-----------GCCTTTGCTGTGCTGATAACACACACTGCAAGTTTCTGAGAGG-GACGGTGGCGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCTCCCGGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAAGCATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAATGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGTTGTGGAGACTGAGGGAACTCGCAGGTAGTAGTGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAG--GACACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATCCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCTCTTAGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGCGGTTAGGCTCGGCAGCCCGAG-TGCTGTCGGCAGGCTGCCTGCGGTGGGGATACCGTGA------GCACATTTACCCTCCCACCGCTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102697862 632 - 106955855 GGG-----------GCCTTTGCTGTGCTGATAACACACACTGCAAGTTTCTGAGAGGAGACGGTCGCGGGCAGTGTTTCT----------------------------CCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAAG-ATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTAGGCTAATGGGATGGACAGTTCCAAG-GGGACATCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCACAGGTAGTAGAGAGGGCGGGCAGCAGGGCCAGGAGGTGATGA---GAGACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATCCCCAGGAGAGAAATGGGTAGTCAGTCCTGTTGGGCACTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGCAAAGAAGCCCAGGAGGCGGTTAGGCTCGGCAGCCCGAG-TGCTGTCGGCAGGCTGCCTGCGGTGGGGATACCATGA------GCACATGTACCCTCCCACCGCTTTCTGGAGTGCTG--GTAACTTGCAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985901 633 + 64156825 GGG-----------G-CTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTTCGAG-GGGACACCCTGAGTGGGCACTTAGGGGGCTGGCGTGGAGACTAAGACGACCCGCGGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGCGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGTCTGTGGGGTGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCAGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTATGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010616 633 + 59248254 GGG-----------G-CTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTTCGAG-GGGACACCCTGAGTGGGCACTTAGGGGGCTGGCGTGGAGACTAAGACGACCCGCGGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGCGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGCCTGTGGGGTGGCTGGAAAGAGGTGCAGGAGGTGGTTAGGCTCGGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116883 634 + 51301725 GGG-----------GCCTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTGTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAACGCTGCCACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGACGGTTTCGAG-GGGACACCCTGAGTGGGCACTgggggggCTGGCGTGGAGACTAAGACGACCCGCAGGTAGTAGGGAGGGCGGGCAGCAGGGCCAAGAGGTGATGAGGAGAGACACTGAGGCAGATACTccaggggccaggctgggctctgccACCTTCCCAGCCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGCCTGTGGGGCGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCGGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824088 634 + 50890351 GGG-----------GCCTTGGCTGTGCTGATAACACACACTTGAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCGTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAGTGTTAGGCAGGAGCAA---CGTGGGCCTGAGGCCCCTCTGTGGGCTAATGGGATGGACGGTTTCAAG-GGGACACCCTGAGTGGGCACTGAGGGGGCTGGCGTGGAGACCAGGACGACCCGCAGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGTGCAGGGAGCCTGTGGGGTGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCAGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGTCCTGTGAGTAGTTTCTATGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401564 635 + 49145316 GGG-----------GCCTTGGTGGTGCGAGTAACACACACTGCGTGTTTATGAGAGAAGACGGTGGTGTGCAGTGCTTCT----------------------------CTACCTCCCCTAACATCTCCCAGGACAGCAGCA-GCTTCAGAAAACGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CCGGGGCCTGAGGCCCCTCTGTGGGCTGATGGGATGCATGGTTCCAAG-GGGACACCCTGAGTGGACATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCTGCAGGTAGTGGGGAAGGTAGGCAGCAGGGCCAGGTGGTGATGAAAAGAGACGCCAAGGTAGGGACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGTCCCC--ACCGCCAAGCAGCGAT-CCTAGGAGAGAAGTGGGTAGTCAGTCCTGCTGGGCGCCTGGTAAGCGCAGGGTACCCGTGGGGTGGGTGGAAAGAAGC-CAGGAGGCGGTTAGGTTCAGCAGCCTGAGCTGCTGTTGGCAGCATGCCTGTGGCGGAGATGCCAGGA------GCACGTTTACCCTCCCACCACTTTCGGGAGCGCTG--GTAATTTACGACCCTGTGAGTAGTTTCTCTGACCCTTCCGGTGGCATTTCAGAAGTG-CCATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3654512 633 + 145441459 CAGAAAGTCAGACTGCCTGTGCTGCACTGACTGCAGGAAGCAC---TTCCTGAGAGAGGAAGGCAGTATGCGGCACTTCTGAATTCCTTTAGATCCTAATGAATAAACTCAGCTCTGTCAATTTCTCCTACAATAAGAACATATCTTAGGAGAC----------AAGAATGTT--GTTGAAGAAG---C-----CCAGAATTCCTT---TAGGCTAATAGAAAGGACAGTCTCCAGTGGGAGGACCTAAGTGCACACTAATGAAGCTAATTTGGGGACCAGG----------------------GTTTAGGAGCA--GCCAG--AGTAATGGAGTGAGGAGGTGGGGCAAGGAATCATGGGGGTGGGCTTAGTTCTGCCACCTTATCAGGCCCCTTGACTGTCAAGCAGAAGT-CCCAGGAAAAATGTGAATGGCCAGTTTTCTTTGTGATTT----------------TTGTGTGGTGGTC----AGAAGGCTAGGAGGCAGTTTGGCATGGCAGCCTGGT-TGTTGG----AGCGTAGTTTAAGTAGGGATGCCCTGGAGCACTGCATTTTTACAGTTTCATGATTAGCTGACATTCGGAAGGAATTGATTGTCCTAG-------TTCCCTTACGCTTAA----ACA-TTTAGGCTGATCCAACTAATTGCAAATTGAGGTTGGGATTTTTGTTTTTGTTTGTGTTGtttgtttcttttac i mm10.chr7 C 0 I 53 s canFam3.chr1 19615381 383 - 122678785 TGG-----------GTCTTGGCTGTGCTAGTGATGGACATCATGGACTTCCGAGAGGGGA-----------GGCACTTCT-----------------------------CAGGCCGTCTGTGTTCCCCCA------------------GTGAACCCTGT-------GGATCTGGGACGGGAGCTGGTCCTCGAACCAGGGTCC-----------------------TAGTTAGGGA-GGAGCCTGGTGGGAGGGCACCGGTAGGGCTGCTGTAGGCCCTGGG-----------------GGGGGGG---------GGGCCAGGAACCAGTTGG--------------------------------------------------TCTCATAATCCC---TTGACATGTGGCATG---------------------------------------------------------TGTGAGGTG--------------TGGGGAGCAGTTAGCTGC------------CACTGT------------------------GCCCTGG------GCGTG-------TCACTCTGCTCTCTAG-GTAGTG--GTCATCAGCAGCCCTTCAAGTAGCTTTTGTGACCCTTGAAGTGACA-TTCAGGACTG-CTGTCCAATTT--AGATT-------------------------------TTTTTTCTTC--- i canFam3.chr1 I 99 C 0 a score=69762.000000 s hg38.chr19_GL949748v2_alt 122608 22 + 1064304 TCTTGGACATTAGGCGGCTCCA s panTro4.chr19 59056572 22 + 63644993 TCTTGGACATTAGGCGGCTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55933317 22 + 60714840 TCTTGGACATTAGGCGGCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102698494 22 - 106955855 TCTTGGACATTAGGCAGCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59986534 22 + 64156825 TCTTGGACATTAAGCTGCTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55011249 22 + 59248254 TCTTGGACATTAAGCTGCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47117517 22 + 51301725 TCTTGGACATTAAGCTGCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824722 22 + 50890351 TCTTGGACATTAAGCTGCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45402199 22 + 49145316 TCTTAGACGTTAGGCTGCTCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19615764 20 - 122678785 TCTTGGAC--TCAGCTGGTTGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3655145 53 + 145441459 I a score=7231605.000000 s hg38.chr19_GL949748v2_alt 122630 2004 + 1064304 GCTAATCTCATATT----GAGAA--------------CACTTAAGTGTT--------------------TCCCACTAGTCCTCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCAT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ATTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------CCCCAAGAGGGCAGGAGCAGGTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACA--AAGATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCCGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggaggcggcggcagcggaggtggaggGAGCAGCAGCAGTAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGAGGAGGCAGCGGGGTGGGGGGCGTGGGCGGGGCTGGGCAGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTTGAAACAGAGAGGCGCAGGCGCCTCACCCCCGCATCGGTGGGTTCTGAA-CCCCCCGCCCTTGCTGCTGGGAATGGC---CAAGCGCTA------TCCTCCATCTCCCTCGGGTGTT-ACACCCCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCTGAGGC-CAATTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATTGTCCCGAAGTCCTTATTCCTCTGCAGCCACTCCTTCAAATCTTAGCTCAGACCATTCCACTGGGTCTGCCTGTTTCCCGAAGAATGCCCTAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCT------GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAGG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACC-CCCACCCCCACAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTGCCCTCACCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCAGAAATCAAGGTGGGCTCCTCGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T s panTro4.chr19 59056594 2093 + 63644993 GCTAATCTCATATT----GAGAA--------------CACTTAAGTGTT--------------------TCCCACTAGTCCTCTGGCTTCCGACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCAT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGCGAGTGTTTTAAGCATGAAGGTG---ATTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------CCCCAAGAGGGCAGGAGCAGGTGCG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGGCTGAG------GTGGGGGTGATGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggaggaggcggcagcggaggcggagggagcagcagcagtagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGTGGGGGGCGTGGGCGGGGCTGGGCAGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTTGAAACAGAGAGGCGCAGGCGCCTCACCCCCGCATCGGTGGGTTCTGAA-CCCCCCGCCCTTGCTGCTGGGAATGGC---CAAGCGCTA------TCCTCCATCTCCATCGGGTATT-ACACCCCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTAAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCTGAGGC-CAACTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATTGTCCCGAAGTCCTTATTCCTCTGCAGCCACTCCTTCAAATCTTAGCTCAGACCATTCCCCTGGGTCTGCCTGTTTCCCGAAGAATGCCCTAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCT------GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAATGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGACAGTCCTCACC-CCCACCCCCACAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATGGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTGCCCTCACCTGCCCCTCTCAGATCCCATCTGATATGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTCGGACAT--CCCCCGAGCCTCTGTGTCCTGACTCTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCCCTGCCCCCACCCTCTTTCTGGATCTCTTTCTCTGGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55933339 1995 + 60714840 GCTAATCTCAGATT----GAGGA--------------CACTTAGGTGTG--------------------TCCCATTAGTCCCCTGGCTTCCAACAGATG-GGTCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGCG---ATTGAAGCCATGAGGGTG----AGGTCACCCAGGT------CCCCAAGAGGGCAGGGGCAGTTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGATGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggtggaggcggcggcggaggcggagggagcggcagcAATAGTAACAGCACAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGTGGGGTGGGGGGCATGGACGGGGCTGGGCCGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCAGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCTGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGGTGGCAGCCTTTCGAAACAGAGAGGCACTGGTGCCTCACCCCTGCATCGATGGGTTCTGAA-CCACCCGCCCTTGCTGCTGGGAATGGC---CGAGCGCTA------CCCTCCACCTCCGTCGGGTGTT-ACACCTCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACTTGCCTGAGGC-CACTTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATT--------GTCCTCATTCCTCTGCAGCCACGCCTCCAAATCTTAGCTCAGACCATTCCACTGGGTCTGCCTGTTTCCTGAAGAATGCCCTAAGAAAGAT---------TAATGTGCACAAAGGAAAGGCCTGCTTCCCG-----GCCCCCTCACCCTAGCTCCAGCTAGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCAAGAATCCTCACC-CCCACCCCCACAGCTCTCCTCTGCTGATGAGAAACCATTCCAAAGATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCCCCCATCTGTCTACCCTCAGCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACTCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCAGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGCGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTAGGACGT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102698516 1994 - 106955855 GCTAATCTCATATT----GAGGA--------------CACTTAGGTGTT--------------------TCCCTCTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGG-TGAC-------AACCtaagttgtgtgtcagatccctgtgggggtgtccat-ggggcggtgtccagacaggacttggga-agctgg---gcaggctggaaatcagtgtgagtgttttaagcatgaaggtg---attgaagccatgagggtgagtaaggtcacccaggT------CCCCAAGAGGGCAGGAGCAGTTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGG-TGGTGA--GGGAGACCTGCTGGCCCACTGAGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCGCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGTCTAGCggaggcggtggaggcggcggcggaggcggaggGAGCGGCAGCAATAGTAACAG--CAGTGCCAGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGTGGGGGGCATGGGCGGGGCTGGGCAGCAGGCGGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCCGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTCGAAACAGAGAGGCGCTGGTGCCTCACCCCCACATCGATGGGTTCTGAG-CCCCCCGCCCCTGCTGCTGGGAATGGC---CGAGCGCTA------TCCTCCACCTCCGTTGGGTGTT-ACACCCCCACTTCCTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACATTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCT-CCCGTTTCTGTTACCTGCCTGAGGC-CACTCGACTGCCACCGGAGGGTCACTGTTTCAC-TTTCAAAGTGAATTGTCCTGAGGTCCTCATTCCTCTGCAGCCACTCCTCCAAATCTT-----AGACCATTCCACTGGGTCTGCCTGTTTCCTGAAGAATGCCCTAAGAAAGAT---------CAATGTGCACAAAGGAAAGGCCTGCTTCCCG-----GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGGGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGATAATCCTCACC-CCCACCCCGACAGCTCTGCTCTGCTGATGGGAAACCATTCCAAAGATGGGGCTCTGCC--TGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTACCCTCAGCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCACCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTGTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCTAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACTGCCCCGGAAATCAAGGTGGGCTCCTCGGACAT--TCCCCGAGCC-----------------------------------------------------------------------------------------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59986556 1989 + 64156825 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGCC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ACTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGTCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggt------ggcggcggcggaggtggagggagcggcagcaatagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-TCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCACGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAACCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGG-TACTTGATTACCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCGTTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCCCTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGCGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55011271 1989 + 59248254 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGCC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAggctggaaatcagtgtgagtgttttaagcatgaaggtg---actgaagccatgagggtgagtaaggtcacccaggT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCTCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGTCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggt------ggcggcggcggaggtggagggagcggcagcAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCACGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAACCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGG-TACTTGATTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCGTTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCCCTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGCGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47117539 1989 + 51301725 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTATCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ACTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------TCACAGGAGGGCGGGAGCAGCTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGTACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCTGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggc------ggcggcggcggaggtgGAGGGAGCGGCAGCAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGTCC-Ttcccattttattctt--tgttcccAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCAGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---TGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCATGGAAAC----GACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAACGTGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGC-TACTTGACTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCATTCCTCTGTAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCACTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGTGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGACCTGGT---------------------GGAGCACCCGATAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTACTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGtctcccctctctccagccaggcctctctgcccatcccaccctcagggg-ccc---tcctctcaacccctctctTCCATG----CTCTCCAGGAAAGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824744 1984 + 50890351 GCTAATCTCATATT----GA-GA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAggctggaaatcagtgtgagtgttttaagcatgaaggtg---actgaagccatgagggtgagtaaggtcacccaggT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCCGCCCCAGCAGCACCGCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTggcggaggc------ggcggcggcggaggtggagggagcggcagcAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCACCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACA-CCCCACTTCTTTCCAGCACGGAAAC----GACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAACATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGC-TACCTGACTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCATTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCACTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGGAAGGCCTGCTTCCCG-----G-CCCCTCA--CCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGTGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCAAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTACTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCGTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCTTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45402221 1991 + 49145316 GCTAATCACATATT----GAGGA--------------CACTTAGGTGTT--------------------TCTCGGTAGTCCCCTGGCTTCCGACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGCTGTGTGTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCCAG---GCAGGCTGGAAATT------AGTGTTTTAAGCGTGAAGGTG---ATGCAAGCCATGAGGGTGAGTAAAGTCACCCAGGT------TCCCAGGAGGGCGGCAGCAGCTG-G--GGCAGCAAGGCCAGAGAGGAGGCTGCTAGGACA--AAAGTGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCCCTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCACCCACCTATTCCTCTGGCCCCCCACCCACTGCCTCTGCCTTGAGTGCCACCCCTGGCAACAATGGGgcccctgccccagcagcacccccaagtgccctgggccccaaggccagtccagctcccagccacaactcgggcacccctgccccctatgcccaggctgtggccccaccagctcccagtgggcccagcaccacccagccccggccccCCAGCGTCCAGCCTAgtggaggcggtggaggtggcggcggaggcggagggagcagcagcaatagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAATCATCGGGGTGGGGAGCGCGGGCGGGGCTGGGCAGCAGCCGGCAGCCC-TTTCCA-TTGGCTCTT--TGTTCCCAGGTTACAGCTCAGTTGTAGCAGACAGCCCAGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAACAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTTGGCTGTTGACAGGGTTGGGGTGGCAGCCTTTTGGCACAGAGAGGCACTGGTGCCTCACCCCCACCTTGATGGGTTCTGGGCCCCCCCACCCTTGCTCCTGGGAACGTCCAGCAAGTGCTG------TCCTCCACCTCCATCAGGTGTT-GTGCCCCCACT---TTCCAGAAAGGACAC----TACATCAGCCTCTCTGCTTTGCCCTTCATAACGTTCTAAAATACATTCTCATCT-AGTGGAAGTTGTCTCAAGAGCCCCGCACCCTTTCTTCCCCATTTCTGTTACCCGCCCGAGCC-TACTTGACTGCCACAGGA-GGTCAGTGTTCCACTTTTCACATTGAATTGTCCCGAAGTCCTCATTCCTCTGCAGCTACTCCTCCAGATCTTAGCTCAGACGGTTCCACTGGATCT--CCGTTTCCCGAAGAATGCCCCAAGAAAGAGCTTAATTAACAATGTGCACAAAGGAAAGGC---CTTCCTG-----GCCCCCTCGCCCCAACTCCAGCTGGCCTGCCCAAG-GG------GCATGGGCCCTGTGTGTCCACCTGCCCAAG----------GCAGCCTG-------------------------TGTGGCCTGGT---------------------GGAGCCCCCAAGAATCCTCAC--CCCATCCCTGAAGTTCTGCTCTACTGATAAGAAACTGTTCTAAAAATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCTCATCTGTCTGCCCTCAGCCACCCCTCTCAGATCCCTTCTGATTTGTGCGGGCTCCCCTCTCTCTAGCCAGACCTCTCTGCCCATCCCACCCTCAGGGGACCC---TCCTCTGAGCCCCTCTCCTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCGGGGGGACCCAGTCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCTGGTGCCCTGCTCAATGGGCCTCCGCAGTTCAGCACCACCCCGGAAATCAAGGTGGGCTCCTCAGATAT--CCCCTGAGCC-----------------------------------------------------------------------------------------T i calJac3.chr22 C 0 C 0 s mm10.chr7 3655198 1817 + 145441459 gctaatctcagactcatagagggctgcctgtctctgcctctcaagtgctaggatcaaaggcatgtgtcaccacTTTAGGTCTCAAGTTCAGGGTATTTGAGAGTTTCCCTTGGTCTCTTGTCTTAACCTAAACCCT--GTCAGATTCATGTGGG-----CTATAGGGACAATGTCCGGGGAGGACTTGGGACAGCTGG---GTGGGCTGGAAGTAAATAG----GTCTTAAACCTGAAGGTG---ATTGAA------------------GTCTCCTAGGT------GCCTCAGAGAATGTGGACAGTTAAT--AGC----AGGTCAGAGGCAAGGC----------------AGGAGGACAAG------AAGAGGGTGGTGGATAGGGGACAGGCTGGTCTAGTA---CCTGACCCTTTGTTTTTTCTTTCTTTCTTCCTGCAGTCTCCAGCCAAAAATGGCTCCAAGCCTGTCCACAGCAACCAGCACCCCCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCTGGCCCCCCACCTACCACTTCTGCCTTGAGCTCCACCCCTGGCAACAATGGGGCCTCTACCCCAGCAGCACCTACAAGTGCCCTGGGCCCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCCCAGGCTGTGGCCCCACCTAATGCCAGCGGGCCCAGCAATGCCCAGCCACGGCCCCCCAGTGCCCAGCCAAGCGGGGGA------AGTGGTGGTGGCAGCGGAGGGAGCAGCAGCAATAGTAACAG--TGGCACAGGCGGAGGGGCTGGCAAGCAGAACGGTGCCACAAGTAAGTGGAG----ACCAGTTTGGGGAACA-GGGCAAGG-TGGACAGTAGCTGACAGCCTGTTTACA-CTTGTCCTT-CTTTCCCCAGGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGTAGCAGTGGGGGCAGCAGTGCCAGCAGCCAAGCCCTTGGGCCCACTTCGGGCCCTCACAACCCAGCTCCCAGCACCTCGTGAGT------------------AGTGGGGTGGCAGTGTGTGGGCAC----AAGCTCTTATGC----CACTTGTTTTA--GGGTTCCAAG---TTCTACCCTTCCTG--GGTAGTACC---TACCCAGTGTGTCCTTTCTTCACCTCAG-CAAGTGTTCTTTTCCCTGCTTCTTACCAAGTGGG------------------------------------------------ACATGTTTTACTCTCGG-------TTTCACAC--------TACACTGTCTT-CCCATTTCTGTTCTTTGCTCTGAGG-CAGCTGACTCCCATGAGTGTGGGGGCTTTTCCCTTTTCCAAGTAAAATATC-----------------------CTAGTCCTCCATTTCTT----------------------CAGCTTG-----------------------ACAT---------CAGATT--ACTAATGAAAGATCTGCTGCCTT-----G----------TCAGCCTCG--TTACCAGTCCTACTGG------GATTGCACCA--TGTG--CATCTGTGCAATCATTTACTCCAAAACTGTTTCAGTGACAATTCTAGAACTACCCTGTCCCCTGTCCTTTAACTTCATAAGCTGTTGGGGGGACCCTAAAATCCTGGTTGCACACCTCAGTACCTCTGCTGTACTGAAGAGGAG----TCCAGAGGTTGGATTC-ACTTCTGCATGCTC---------CAGCTGTCTT---GCTTTCAGCCCCCACCC-CCCTTTTTGGATCCCATAT----------------------------------TCTGTGCCTGT-----CTTCAAGGA-TCT---TAATTTGATT----CTCCTCCATTCT--TTACCCAGAAAGGAATCCAGTACGGCAGCCCCATCAGGGGCTGGGAATGTGGCTTCAGGCTCAGGGAATAACTCGGGGGGACCCAGCCTCTTGGTGCCACTGCCTGTAAATCCCCCCAGTTCTCCAACGCCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAGTTCAGCACCACCCCAGAAATCAAGGTGAGTTTCTCGGGTGTGAGCCCTGAGCC-----------------------------------------------------------------------------------------T i mm10.chr7 I 53 I 917 s canFam3.chr1 19615784 1640 - 122678785 ACTAATTACATACT----GAGGA--------------CATTTAGTTACC--------------------TCCC--------------TGCCCTCAGATG-GGT-GTCTGTGACCGAC-------ACCCT-GGTTGTGTGTCAAACCCCCACCGG-ATGT-TGT-GGGGAGGCGTCCATGTAGGACATGGGG-AGCTGGGGTGGGGGCTGGGATGCA-TGTGAGTGTCTTAGGTGTGAAGGTGGTTATTGAAGCCTTGAGGCTG----AGGTCAGCAGGGGGAGGAAGCTCAGGCAGCCAGGCCCAGTGAGGACGGCAGCCCAGCTTGGAGGAGGGGTGCCGGGGCGGCGGGGGGGAGGGCGGGCAGCATGTGCGGGAGGCTC--AGCAGACCTGCTGGTCAATTGGATCCTGATCCTCT--TCTCTC-------CCACCTGCAGTCTCCAGCCAAAAATGGCTCTAAGCCTGTCCACAGCAACCAGCATCCTCAGTCTCCGGCCGTGCCGCCCAGCTACCCACCTGGCCCCCCACCTGCCACCTCTGCCCTTAGCACCACTCCTGGCAACAATGGGGCCTCCACCCCAGCAGCGCCCACAAGTGCCCTGGgccccaaggccagcccagctcccagccacagttccggcacccctgccccctacgcccaggccgtggccccaccagcccccagcgggtccagcaccacccagccccggcctcccagtgtccagcccggtgggggagggggaagtggtggaggcggcagtggcggcagtggcagtagtaacag--cagtggaggtggaggtgctggCAAACAGAACGGCGCCACCAGTAAGTGGGAGGACTGCAG------GGGGTTGGGGGGGTCTGGG-ATTGGCTGGC--CTC-TTTTCA-TTCTCTCTTCCCACCCCCAGGTTATAGCTCAGTGGTGGCCGACAGCCCGGCAGAGGTGGCTCTCAGCAGCAGTGGGGGCAGTGGTGCCAGCAGCCAGGCTCTGGGCCCCCCATCAGGTCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCT-------------------------GGCCTTC------------------------------------------------A-GCCCCTGTCCTTGCC-------AGGAC------------------TTCTCCCACTGGGTTGGGTGTC-GTG-TCCAACTTCTTTCCAGCCAGAACATCGTATACGCCAGTCCCCTAGCTTTGCCCTTTTGACTGTTTTAAAACGT-TCCTTGGTTGATTGGGAGTGCTCACA-GAGTTCCATATG------TCCCCTTTCTGGTGACCTGCCTCAGGCTCACCTGACTCCCCTCAGAG-----------------------------------------------------AGCTGCCGCTCCATACCTCAGGTCAGACCTTTC------------------TCAGAAGATGGCCCCAAGAAAGGG---------AGGAGTG---------AAGAGCTGCTCCCTGGGTCTGCCTCCTTAC-CAGGCTCTGGGTGGGCTGCCCCAAGGGATGGACGCACTTGCCC--TGTGTCCATGCACCTAAG-----------------------------------------------------T---------------------GGAACA-----------------TCCACCTC----------------------------------------------------------------------CCACATGCTCC-----------------CCACCCC------------------ATGTGCCGTCGC--------------------CGCGGCCTGACTCGTCCCTGGAGC-ACCGAGCCCTCTC-------TCCTTCTCTG----CTGCCCAGGAAGGAACCCAGTGCAGCAGCCCCTGCAGGGGCTGGGGGTGTGGCCCCAGGCTCAGGGAACAATACAGGAGGACCCAGCCTCCTGGTGCCGCTTCCCGTGAACCCTCCCAGCTCCCCAACACCTAGCTTCAGTGAGGCCAAGGCAGCTGGCGCCCTGCTCAACGGACCTCCACAGTTCAGCACCGCCCCAGAGATCAAGGTGGGCCCC--AGCTG------------------------------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=907990.000000 s hg38.chr19_GL949748v2_alt 124634 319 + 1064304 CTGTGTCCTGACT-------------------CTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCTCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGCACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGGCAT s panTro4.chr19 59058687 319 + 63644993 CTGTGTCCTGACT-------------------CTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCTCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTATTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCGGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935334 319 + 60714840 CTGTGTCCTGACT-------------------CTGCTGTTTCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTTTGTCCCCTTCTGAC-ACTTGCTTTTTCTCCAGGTCTTTCTGTGCCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCATAAGGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102700510 319 - 106955855 CTGTGTCCTGACT-------------------CTGCTGTTTCTTTCCTCCAGGTCTCTAGCTGTGCCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTGTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATGCCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCTCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGACAT i nomLeu3.chr10 C 0 I 118 s rheMac3.chr19 59988545 320 + 64156825 CTGTGTCCTGACT-------------------CTGCTGCTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCAACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013260 319 + 59248254 CTGTGTCCTGACT-------------------CTGCTGCTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCAACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCT-GGGGCTCTCATACCTCCCCACTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47119528 320 + 51301725 CTGTGTCCTGACT-------------------CTGCTGTTCCTTTCCTCCAGGTCTCTAGCTGCgcccc--------------ttgcccccaccccctttctggatctctctctctctagctttCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCTAAAGCTCTGTTTCTCTgggtctcttttcctttctcttggttATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46826728 320 + 50890351 CTGTGTCCTAACT-------------------CTGCTGTTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCCACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGTTCTTATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGCATCACCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404212 296 + 49145316 CTGTATCCTGACTGCTCTCTGCACTCCAGACATTTCTCACCCTTTCCTCCAGGTCTCTAGCTGTGCACC--------------CTCCCCGC-----CTTTCTGGA--TCTTGCTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCGGGTCTTTCTGCACCACGCTCTCC-TGACCATGATCTCTGGGAGCTCTCATA-CTCCCCTCTTG-TCCCTCTGAAG--CTGTTTCTCTGGG--TCTGTTCCTCTCTCTTGGTT----------------------------TCATCCTCATCTCCCC--CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCTTTACAAAGGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19617424 303 - 122678785 CTGTGTCCTTGTC-------------------CTGCCG------TCCTCCTGTACATTTGCTGTCCCCCAACCTGCAGGTCTGCCACCCTCAACTCCTCTGGGGG--------GCTCTGG-----TGTGCTCTCCACACTGCCTGCGCTCTCTCCTGGTCTCTGAGCTCC------TCCACCATCCTGCCCTCTGGGA---CACTTTCCTGTGCTCCTGTTGGGACCTGCCCTCTTGCACTCTGGG-----TTCCCATCATCTCTGTCCCCATTTCTGCTTACTCCTTCAGACAC-CCATCATCCAGCTCACC----ACCATCCTTTTCCCTTCCGAGGGACCGCCTAAATTGAGAAAAC-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I a score=2548.000000 s hg38.chr19_GL949748v2_alt 124953 1 + 1064304 A s panTro4.chr19 59059006 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935653 1 + 60714840 A i ponAbe2.chr19 C 0 I 116 s rheMac3.chr19 59988865 1 + 64156825 A i rheMac3.chr19 C 0 I 116 s macFas5.chr19 55013579 1 + 59248254 A i macFas5.chr19 C 0 I 117 s papAnu2.chr19 47119848 1 + 51301725 A i papAnu2.chr19 C 0 I 117 s chlSab2.chr6 46827048 1 + 50890351 A i chlSab2.chr6 C 0 I 116 s calJac3.chr22 45404508 1 + 49145316 A i calJac3.chr22 C 0 I 114 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617727 0 - 122678785 C e nomLeu3.chr10 102700829 118 - 106955855 I a score=2255.000000 s hg38.chr19_GL949748v2_alt 124954 34 + 1064304 GACTGGTGTACTTTCTGCACAAGTAGAAAGACTG--- s panTro4.chr19 59059007 34 + 63644993 GACTGGTGTACTTTCTGCACAAGTAGAAAGACTG--- i panTro4.chr19 C 0 C 0 s canFam3.chr1 19617727 29 - 122678785 -ACTGATGCCCACTCTG-------GGATGCATTTCAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e ponAbe2.chr19 55935654 116 + 60714840 I e calJac3.chr22 45404509 114 + 49145316 I e nomLeu3.chr10 102700829 118 - 106955855 I e chlSab2.chr6 46827049 116 + 50890351 I e papAnu2.chr19 47119849 117 + 51301725 I e macFas5.chr19 55013580 117 + 59248254 I e rheMac3.chr19 59988866 116 + 64156825 I a score=2100.000000 s hg38.chr19_GL949748v2_alt 124988 1 + 1064304 G s panTro4.chr19 59059041 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935770 1 + 60714840 G i ponAbe2.chr19 I 116 C 0 s rheMac3.chr19 59988982 1 + 64156825 g i rheMac3.chr19 I 116 C 0 s chlSab2.chr6 46827165 1 + 50890351 G i chlSab2.chr6 I 116 C 0 s calJac3.chr22 45404623 1 + 49145316 G i calJac3.chr22 I 114 C 0 s canFam3.chr1 19617756 1 - 122678785 G i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e nomLeu3.chr10 102700829 118 - 106955855 I e papAnu2.chr19 47119849 117 + 51301725 I e macFas5.chr19 55013580 117 + 59248254 I a score=475045.000000 s hg38.chr19_GL949748v2_alt 124989 151 + 1064304 TTGGGTGAATGCAGCCTGGTTCCACCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgcggtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg--tctgagagggggtgatgtttaagctgaga s panTro4.chr19 59059042 152 + 63644993 TTGGGTGAATGCAGCCTGGTTCCACCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgcggtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935771 152 + 60714840 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102700947 152 - 106955855 TTGGGTGAATGCAGCCTGGTTCCTCCCTGT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i nomLeu3.chr10 I 118 C 0 s rheMac3.chr19 59988983 152 + 64156825 ttgggtgAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccactgaggggcatctgagctgacctgggagacaggcccaggaggg-ctctgagaggtggtgatgtttaagctgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013697 152 + 59248254 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccactgaggggcatctgagctgacctgggagacaggcccaggaggg-ctctgagaggtggtgatgtttaagctgaga i macFas5.chr19 I 117 C 0 s papAnu2.chr19 47119966 152 + 51301725 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCAGCTGCCGGGAAG--GTTGCTGTGGGCCCACTGAGGGGCATCTGAGCTGACCTGGGAGACAGGCCCAGGAAGG-CTCTGAGAGGTGGTGATGTTTAAGCTGAGA i papAnu2.chr19 I 117 C 0 s chlSab2.chr6 46827166 146 + 50890351 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCACTTgcagggaag--gttgctgtgggcccgctgaggggcatctgagctgacctgggagacaggcccaggaagg-ctctgagagg------tgtttaagctgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404624 147 + 49145316 TTGGGT-AATGCAGCCTGCTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGTGTCAgcaggagag--gttgctatgggtcccctgaaggatatgtgacctaacctgggagacagg-ccaggaagg-ctctgtgaggggg---tgtttcagctgaaa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19617757 156 - 122678785 CTGGGTGAATACACCCAGGTCCCGCCTTCTGTACGGGAAGCTGCGTGTGACTGCACGGG-----GCAGGGCAGCACGTGCTGTGGAGCCATAGAAATGTCTTATACTGAACCTGGGGAGGTGGCCCAGCAAGGTCTCTAAGGAGAGA---CCTCTGAGCCGGGA i canFam3.chr1 C 0 I 429 e mm10.chr7 3657015 917 + 145441459 I a score=708773.000000 s hg38.chr19_GL949748v2_alt 125140 330 + 1064304 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgtgtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGACAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGATAGGACGGTGGGGTCCTGATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATACTGTAGCGCAGCTTCCATGGGGGGACCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAGTGTGCGCGCCCAGGCTGTCCAGGAGGCAG s panTro4.chr19 59059194 330 + 63644993 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgtgtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGACAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGATAGGACGGTGGGGTCCTGATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATACTGTAGCGCAGCTTCCATGGGGGGACCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAGTGTGCGCGCCCAGGCTGTCCAGGAGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935923 306 + 60714840 cctggaccaggcagaggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgggtgcttcggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGGTGGCGTCCTGATCATCAAGGGTCAGGAGCTGGGGCTTGGCTCGTGAGCCAGTATACTGTATACTGTAGCGCAGCTTCCACGGGG-------------------------------GGCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701099 316 - 106955855 cctggaccaggcaggggggctaacagctgca------------ggaggggcttc------------aggaggagcctgcatctgcctgggtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGGTGGGGTCCTCATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCTA-------GTGTACTGTAGCGTAGCTTCCACGGGGGG--CAGTGTGTATGCCCAGGCTGTCCAGGAGGCACTGTGTGCGCCCAGGCTGTCCAGGAGGCAG i nomLeu3.chr10 C 0 I 319 s rheMac3.chr19 59989135 260 + 64156825 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatct----------ttaggaggctgggcaggaTGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATCCTGTAGTGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013849 260 + 59248254 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatct----------ttaggaggctgggcaggaTGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47120118 253 + 51301725 CCTGG-------AGGGGGGCTAACAGCTGCA------------GGAAGGGCTTCAGGAGGTGCTTTAGGAGGAGCGTGCATCT----------TTAGGAGGCTGGGCAGGATgcagcagagaggagagaggtgTCCACTCTGCAGCAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCCTGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46827312 271 + 50890351 cctggaCCAGGCA-GGGGGCTCACAGCTGCAGGAAGGGCTGCCGGAAGGGCTTCAGGAGGTGCTTTAGGAGGAGCATGCATCT----------TTAGGAGGCTGGGCAGGATGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGTTCCTGATCATCCAGGCTCAGGAGCTGGGGTTTGGCTCGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AAGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404771 262 + 49145316 cctggagCAGCCA-GGGGTCTAACAGCTGCA------------GGAGGGGCTTC------------AGGAGGAGTCCGCATCTGCCTGAGTGCTCAGGAGGCTGGGCAGGATGCAGCAGAGAGGAGC-AGGTATCCACTCTGCAGGAGGCAGTGCTGCCGGCTGGAGGGCTGA--------GTGTGGCAGGACAGGAGTGGGGGTTCCTGATCATGGAGGGTCAGGAGCTGGCACTTGGCTCGTGAGCCA-------GGAT-CTGCAGCGTAGCTTCCACAGGG------------------------------AGGTAGTGTGCCCC---------------AGCCTG i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=501838.000000 s hg38.chr19_GL949748v2_alt 125470 188 + 1064304 TGTGCGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtg-----ccttcatctgggaaacggcaatagtcacgattatacctactatgtagggttatttggaagactaaatcatcctcataaagctcttggaacagtttctggcccaacagaagcattaattttttt-------------tttttttctttttt s panTro4.chr19 59059524 188 + 63644993 TGTGCGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtg-----ccttcatctgggaaacggcagtagtcacgattatacctactatgtagggttatttggaagactaagtcatcctcataaagctcttggaacagtttctggcccaacagaagcattaattttttt-------------tttttttctttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936229 189 + 60714840 TGTGTGTGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtgcctt-ccttcatctgggaaacggcaatagtcacgattatacctactatgtagggttatttggaagactaaatcatcctcgtaaagctcttggaacagtttctggcccaacagaagcattaa---tttt-------------tttttttctttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701734 191 - 106955855 TGTGTGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtccttgctgtgcatt-ccttcatctgggaaacggcaatagtcacgattatacccaccgtgtagggttatttggaagactaaatcatcctcataaagctgttggaacagtttctggcccaagagaagcattaa-tttttt-------------tttttttctttttt i nomLeu3.chr10 I 319 C 0 s rheMac3.chr19 59989395 190 + 64156825 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatatgggaaatggcaataatcacaattatacctaccatataggtttatttggaagactaaatcattcttacgaagctattggaacagtttctgacccaacagaagcattAA---tttt-------------tttttttctttttt i rheMac3.chr19 C 0 I 347 s macFas5.chr19 55014109 190 + 59248254 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatatgggaaatggcaataatcacaattatacctaccatataggtttatttggaagactaaatcattcttacgaagctattggaacagtttctgacccaacagaagcattaa---tttt-------------tttttttctttttt i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47120371 190 + 51301725 CATGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCATTGTCTTTTCTGTACCTTCCCTTCATCTGGGAAATGGCAATAATCACGATTATACCTACCATATAGGTTTGTTTGGAAGACTAAATCATTCTTACGAAGCTATTGGAACAGTTTCTGACCCAACagaagcattaa---tttt-------------tttttttttttttt i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46827583 203 + 50890351 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatctgggaaatggcagtaatcacgattatacctaccatataggtttatttggaagactaaatcattcttatgaagctattggaacagtttctgacccaacagaagcattaa---ttttatttttatttttatttttttttttttt i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45405033 172 + 49145316 ------------------CCAGGTCCAAGTTTTGGCAttgtcttttctgtgcttg-ccttcatctgggaaatggcagtgat-atgatgataactaccatacagggttatttggaagagcaacttactatggcagagctcttggaacagtttctggcccaacagaggcattcg-attttt-------------tttttttttttttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=439776.000000 s hg38.chr19_GL949748v2_alt 125658 210 + 1064304 gagacagagtcttgctctgtcacccaggctggagtgcagtggtgcaatctcagctgaatgcaacatccgcctcctgggttcaagcgattctcctgccgcagcctactgagtagctgggattacaggcgcctgccaccacgccaggctaatttttatatttttaatagagatggggttttgccatgttggtcaggcaggtcttgaactccg s panTro4.chr19 59059712 210 + 63644993 gagacagagtcttgctctgtcacccaggctggagtgcagtggtgcgatctcagctgaatgcaacatccgcctcctgggttcaagcgattctcctgccgcagcctactgagtagctgggattacaggcacctgccaccacgccaggctaatttttgtatttttaatagagatggggttttgccatgttggtcaggcgagtcttgaactcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936418 209 + 60714840 gagacagagtcttgctctgtcacccaggctggagtgcagtagtgcgatct-ggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctactgagtggctggtattacaggcgcctgccaccacgccaggctaatttttatatttttaatagagatggggttttgccatgttggtcaggcgggtctcaaacccct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701925 209 - 106955855 gagacagagtcttgctctgtcacccaggctggtgtgtagtagtgcgatct-ggctcgctgcaacctccacctcccgggttcaagcgattctcctgcctcaccctactgagtagctgggatcacaggcgcctgccaccacgccaggctaatttttgtgattttcatagagatggggttttgccatgttggtcaggcgggtctcgaactcct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55014309 209 + 59248254 gagatggagtcttgctctgtcaccgaggctggagtgcagtggtgccatct-ggctcactgcaagctctgcctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcgggtctcgaactcct i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47120562 209 + 51301725 gagatggagtcttgctctgtcactgaggctggagtgcagtggtgccatct-ggctcactgcaagctccacctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctagtttttgtatttttagtagagatggggtttcaccatgttggtcaggtgggtctggaactcct i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46827787 209 + 50890351 gagatggagtcttgctctgtcaccaaggctggagtgcagtggtgccatct-ggctcaccgcaagctccgcctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcgggtctcgaactcct i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45405205 203 + 49145316 ----gagagtcttg--ctgttacccaggctggagtgcagtcgttcagtctcagttcactgcagtctccacctcccgggttcaagtgagtctcctgcctcagcctcccaagtagctgggattacaggtgccaaccacc-cacctggttgatttttgtatttttagaagagatggggtttcaccatgtgggtcaggcagggcttgaactcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e rheMac3.chr19 59989585 347 + 64156825 I a score=1174031.000000 s hg38.chr19_GL949748v2_alt 125868 399 + 1064304 aacctcaggtgatccacccacctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAGTGCGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAGAA-GGGGTCCATATCTTTTAACACCACCAACAACAAAAATGAATCGCTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCCTGGGCTGTGTGGGACATGGTGGCACGACAGGGAAGGGAGCCATCCAGTGGGGTTTAGAAGCAGGAC s panTro4.chr19 59059922 399 + 63644993 aacctcaggtgatccacccacctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAGTGCGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAGAA-GGGGTCCATATCTTTTAACACCACCACCAACAAAAATGAATCACTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCTTGGGCTGTGTGGGACATGGTGGCACGACAGGGAAGGGAGCCATCCAGTGGGGTTTAGAAGCAGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936627 399 + 60714840 aacctcaggtgatccacccgcctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGATGGGATATTTATAGTGCGTGCATCTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATATCTGTTAACACCACCACCAACAAAAATGAATCGCTGGGGTGGGTGGTCGGGAGCCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCCTGGGCTGTGTGGGGCATGGTGGCGTGACAGGGAAGGGAGCCATCCAGTGGGGGTTACAAGCAGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702134 400 - 106955855 aacctcaggtgatccacccgcctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAATGTGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGGTTTTCAAAATGGGTTCCATATCTTTTAACACCACCACCAACAAAAATGAATTGCTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACGTGACTTAATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACGGGCCTGGGCTGTGTGGGGCATGGTGGCATGACAGGGAAGGGAGCCATCCAAGGGGGGTTAGAAGCACGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59989932 401 + 64156825 aacctcaggtgatctgcccgccttggcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGACAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i rheMac3.chr19 I 347 C 0 s macFas5.chr19 55014518 401 + 59248254 aacctcaggtgatctgcccgccttggcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGACAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47120771 401 + 51301725 aacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctggcccaaattttAGAAGTATGGTGGACAAGATATTTATAGTGCAtgcatttttctggaaaaagggGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGAGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGcgtggggcgtggtggcgtgaCAGGGAAAGGAGCCATCCAAGGTGGCTTAGAAGCAGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46827996 396 + 50890351 aacctcaggtgatctgcccgcctcagcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAGGGTTTG-----GAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGCCAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405408 370 + 49145316 gacctcaggtgatccacccacctcagcctcccaaagtactgggattacaggcttgagccaccgcacccagccCAAA-TTTAGAAGTACTGTGGACAGGAAA--CATACTGTGTGCATTTTTGTGGAGAAA-GGGAAACA--AGCTTTGAGATTTTCAAGA-GGGGTTCATACCTTTTGACACCACCACCAGCAAAAATGAATCACTGGGGTGGGCGGTCAGGAACTATGGCAAGGTTTGAAGTAGAGAAGGAACAACCTGACGTCATTAGAAAGGTCCCCTGGGGC---TGAGGACAGGATAGAGGGTGGGTGGTCTGGGCAGGAGAGGACAGGCCCGGGCTGTGTGGGGCATGGTGGCATGACAGG----------------------TTAGAAGCAGGAC i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=285119.000000 s hg38.chr19_GL949748v2_alt 126267 117 + 1064304 GGATAgctgggcgtggtggctcacacctgtaatcccagctcttagggaggcagaggcgggaggatagcttgagcccaggagtttgagacctgcctgggcgatatagcgagacAGAAT s panTro4.chr19 59060321 117 + 63644993 GGATAgctgggcgtggtggctcacacctgtaatcccagctcttagggaggcagaggcgggaggatagcttgagcccaggagtttgagacctgcctgggcgatatagcgagacAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937026 117 + 60714840 GGATAgccgggcacggcggctcacatctgtaatcccagctcttagggaggcacaggcgggaggatagcttgagcccaggagtttgagacctgcttgggcgatatagcgagacAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702534 117 - 106955855 AGATAgccgggtgcggtggctcacgcctgtaatcccaactcttagggaggcagaggcgggagggtagcttgagcccaagagtttgagacctgcttgggcgatatagcaagacAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59990333 117 + 64156825 GGATAgccgggcgcggtggctcacacctgtgatcctagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgatacagcaaaacAGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55014919 117 + 59248254 GGATAgccgggcgcggtggctcacacctgtgatcctagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgatacagcaaaacAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121172 117 + 51301725 ggatagccgggcgcggtggctcacacctgcgatcccagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgaTACAGCAAAACAGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828392 117 + 50890351 GGATAgccgggcgcggtggctcacacctgtgatcccagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcccgggcgatacagcaaaacAGGAT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e calJac3.chr22 45405778 0 + 49145316 C a score=593260.000000 s hg38.chr19_GL949748v2_alt 126384 227 + 1064304 GGATAAGCCTTGGCGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTTGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTGCGGGGCTGGAGACCCAACCTACCTGTTTCCAGCAAGGAGACTGAAGCCTAGCCGGGCTGGGCCCACCCCG s panTro4.chr19 59060438 227 + 63644993 GGATAAGCCTTGGCGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCGTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGTAACGAGGCTGTGGCTGCAGGGCTGGAGACCCAACCTACCTGTTGCCAGCAAGGAGACTGAAGCCTAGCCGAGCTGGGCCCACTCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937143 227 + 60714840 GGATAAGCCTTGGCGACTGACTTGTTGTGGAGAGTCCAGCACAGAGTTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGACGCTGTGGCTGCAGGGCTGGAGACCCCACCTACCTGTTGTCAGCAAGGAGACTGAAGCCTAGCCGGACTGGGCCCACCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702651 177 - 106955855 GGATAAGCCTTGGTGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGAAACAGATGCCTGCCGTAACCTTTGTAATAGGAAACGAGGCTGT--------------------------------------------------GCCTAGCCGGGCTGGGCCCACCCCG i nomLeu3.chr10 C 0 M 981 s rheMac3.chr19 59990450 224 + 64156825 GGATAAGCCTTGGCAACTGATGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGTCTAGCAGGGCTGGGCTCACCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015036 224 + 59248254 GGATAAGCCTTGGCAACTGATGCTTTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACACGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGTCTAGCAGGGCTGGGCTCACCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121289 224 + 51301725 GGATAAGCCTTGGCGACTGACGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGGTGCACGTGGCCAGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACACAAGCCTGCTGTAACCTTTGTAATAGGAAACAAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGCCTAGCAGGGCTGGGCTCACCCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828509 224 + 50890351 GGATAAGCCTTGGCGACTGACGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGTCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGCCTAGCAGGGCTGGGCTCACCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405778 210 + 49145316 GGATAAGCCTTGGTGACTAAAGCATTGTGGAGAGGACAGCACAGGGCT-GGGTTAGGGACAGCTGCCCATGGCCAGAGGAGAT-GGAGGAACCAGGTCTGACTTTGGAGAACAGAAGCCTGCTGTAGCCTTTGTAATAGGAAAGGAGGCTGTGGTGGTAGGGCTGGAGGC---------------TCAGCAAGGAGACTGAATCCTAGCAGGGCTGGGCCCATCCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=906292.000000 s hg38.chr19_GL949748v2_alt 126611 405 + 1064304 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCGGCGTAGTATTCCATGCTGCAGAGTCCCACTCACGAGACGTTCCTCTGCTGATGAATGCGTC-GTGGTCTCCGATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATTGTGGGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAAACAGGGCAGGTGAGAGCATCTGGGGCCTGTGTC s panTro4.chr19 59060665 405 + 63644993 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCGGCGTAGTATTCCATGCTGCAGAGTCCCACTCACGAGACGTTCCTCTGCTGATGAATGCGTC-GTGGTCTCCGATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATTGTGAGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAAACAGGGCAGGTGAGAGCATCTGGGGCCTGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937370 406 + 60714840 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAACGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCACACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCTGCGTAGTATTCCATGCTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTGGTTTCCAATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCGTGAGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAGACAAGGCAGGTGAGAGCATCTGGGGCCTGTGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59990674 406 + 64156825 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGAGAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACATAATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGTGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015260 406 + 59248254 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGAGAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACATAATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGTGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121513 405 + 51301725 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGACAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATAAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCAAGCGCATCTGGGACCTGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828733 405 + 50890351 ATCCCAGTCACCCCATGCCAGTCAGAAGCAGACAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCATGCAGTATTCCATGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTCATTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405988 365 + 49145316 ---CCCGTCACTCCATGCCAGTCAGAGGCAGACGGCCGAGCATGTAGTCCTCCTGCCTCCTTCAAGACAGGCGGGGGCTCTCCC-------------------------AGAGTGTACTGTTGGCTCATCCTCTGACAAACA--GTAGCGCACTGTAGGT-GTTCTGCAGGTTGGCATTTTCCTCTGTAGTAGGCCACAAACTTGTGTTTTGAAAATCTCTGCGCCGTATTCCATGGTGTAGAGTCCCACTTATTAGACGTTCATCTGCTGATGAGTGCGTCAGTGGTTTC---------CCCCTCAGGTTGATGCTTTTACCTTTCATGGGTAGATCACGAGTAGTGGGTCACTGGCCCTCCATAGTCTCCCAACA--GCAGGCGACAGCATGTGGGGCCTGCGTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e nomLeu3.chr10 102702828 981 - 106955855 M a score=112262.000000 s hg38.chr19_GL949748v2_alt 127016 45 + 1064304 AGGCTGCACTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT s panTro4.chr19 59061070 45 + 63644993 AGGCTGCACTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937776 52 + 60714840 AGGCTGCACTTGCTCCTGCAGCCCCAG---TGCTCAGGCC---AGGCCTCGCTTCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59991080 45 + 64156825 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015666 45 + 59248254 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121918 45 + 51301725 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829138 45 + 50890351 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406353 45 + 49145316 AGGATAAGCTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------TT i calJac3.chr22 C 0 C 0 s mm10.chr7 3657932 54 + 145441459 AGGCTGAACATTTTTATGCAGCTCAGTCTCTGCTCAGGTCCTGAGACTTAAC----CC i mm10.chr7 I 917 C 0 e canFam3.chr1 19617913 429 - 122678785 I e nomLeu3.chr10 102702828 981 - 106955855 M a score=869051.000000 s hg38.chr19_GL949748v2_alt 127061 265 + 1064304 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACCGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGCGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCA--CCCTCCCCACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGCC s panTro4.chr19 59061115 265 + 63644993 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACCGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGCGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCT--CCCTCCCCACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937828 266 + 60714840 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATCGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCAC-CCCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCCCAGCCGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59991125 266 + 64156825 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015711 266 + 59248254 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121963 265 + 51301725 CATTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCTATCCTCACCACTGA-GGGGCCGGA-----------CCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGcacctccagcctcagctcagcCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829183 267 + 50890351 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCCCGCTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406398 265 + 49145316 GGTTTCCTCCC--CAGGCCCCAGAGCAAACTTTGAGCTCCTTGAAGTCCATGGCAGAACGGGCAGCCATCAGCTCTGGCATTGAGGATCCCGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGGTCCCGGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGACTGGCCC--GACCCATCCTCACCACTGAGGGGGCCA-------------CCCCCC-CTTTCCCCACAGACATCATCCTCAGTAGCACATCAGCACCTCCGGCCTCAGCCCAGCCACC i calJac3.chr22 C 0 C 0 s mm10.chr7 3657986 255 + 145441459 CTTTCTCTTCC--CAGGCCCCTGAAC---CACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCAACGTTACACCTAACTGATCGAGGTGACAGTTATGGGATTGTGGGGAGGGCAAAGGCCAAAAAGGAG---CTGACCC------CATCCTCATCATTGA-AGTGCTTAA----------TGGCC---TCTCCCCTGCAGACATCATCCTGAGCAGCACATCAGCACCACCCACCTCATCCCAGCCACC i mm10.chr7 C 0 C 0 s canFam3.chr1 19618342 273 - 122678785 TGTCTTCTCCCCACAGGCCCCGGAAC---CTCTGAGCTCTCTCAAGTCCATGGCAGAGCGGGCAGCCATCAGCTCCGGCATCGAGGATCCTGTGCCAACGCTGCACCTAACCGAGCGAGGTGAGGGTCTGGGTGAGGCGGGGGCGGGGGCGGCCAGGCAGGTGTAACG-GCAC--ACTCCAGCCTCACCG--GA-GGGCCTGGCCCTGCCACACCCCCCAC-ACCGCCCTGCAGACATCATCCTGAGCAGCACGTCCGCCCCACCAGCCTCAGCTCAGCCGCC i canFam3.chr1 I 429 C 0 e nomLeu3.chr10 102702828 981 - 106955855 M a score=6174823.000000 s hg38.chr19_GL949748v2_alt 127326 1637 + 1064304 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATTCGGTGAGGGGCCACAGGGAAGGGGGATGGTC-TGGGACT--TGAGTCTTACGGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCACGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCTCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAATTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTGCCCCAAATCCACCTGTCCCCGTCCCCGCCTTCCAGCCCAGAGATGTTAGAACTGCTTGGGTTGACAGCGAGGC--TGGTCCACTGAGGCACACCTCAGCCCCGCTTCCAGTTGCCCACTGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCC--CAGTCTAGGCCGACCCCACTCTGCTCATCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAGCTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGATCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATTCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTATCTGGCAGCCAAGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCTCCCTTGCCTCCACCTTTCAGCTGGCGCAGTCCCTCAGCCTGACCAAGTACT-CCTCCCTCTGgctgtctgctcagcctggaacaccgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc s panTro4.chr19 59061380 1639 + 63644993 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGTTGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCCGGGTCTTTCTCTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCAGGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTGCCCCAAATCCACCTGTCCCCGTCCCCCGCTTCCAGCCCAGAGATGTTAGAACTGCTTGGGTTGACAGCGAGGC--TGGTCCACTGAGGCACACCTCAGCCCCGCTTCCAGTTGCCCACTGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAGCTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGGCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATTCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGcctctgctccctcgcctccacctttcagctggcgcagtccctcagcctgaccaagtact-cctccctctggctggctgctcagcctggaacaccgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55938094 1635 + 60714840 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGATGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCACCCCGGGTCTTTCTGTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCAGGACAGGAC----------------------CAGTAGGCAG------CTGGCGC-----TGA--CCTACCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTCCCCCAAATCCACCTGTCCCTGTCCCC-CCTTCCAGCCCAGAGGTGTTAGATCTGCTTGGGTTGGCAGCGAGGC--TGGTCCACTGTGGCACACCTCAGCCCCGCTTCCAGTTGTTCACCGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCTGACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTT---CTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGGTGGcctctgctccctcgcctccacctttcagctggcgcagtccctcaacttgaccaagttct-cgtccctctggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaagccttcctggagccacccagcccagtgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102703809 1635 - 106955855 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGATGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCCGAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACCTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCCGGGTCTTTCTGTACTACCTTCCCCCG-CAGGG-ATGCATTTCTGAGGACCCTTTTGATCAGGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTCCCCCAAATCAACCTGTCCCTTTCCCCCCTGTCCAGCCCAGAGGTGTTAGAACTGCTTGGGTTGACAGTGAGGC--TGGTCCACTGTGGCACACCTCAGCCCCGCTTCCAGTTGCTCACTGGCTCACCT--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCAACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGCCCCCTCTCAACCCCAGTGAGTCATGAGTGATCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTT---CTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAA-AGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTTAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCCCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCTGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCTCCCTCGCCTTCACCTTTCAGCCGGCGCAGTCCCTCAGCCGGACCAAGTTCT-CCTCCCTCTGgctgtctgctcagcctggaccaccaccctctcatcctccacttggccagctcctaggcctcctgtaggtcttagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc i nomLeu3.chr10 M 981 C 0 s rheMac3.chr19 59991391 1630 + 64156825 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGTCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGGTCAGGGCAAGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTG--------CCCCCTACC-CCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTAGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTACTCCCAGTCCTGGG----CCCCCCCCCCCGCCAATTCAACCTGTCCCTGTCCCC-GCTTCCAGCCCAAAGGTGTTAGCACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTTCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCGCTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTCATGTCCTGCCCCGTCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCcggcgcagtccctcagcctgaccacgttct-cctccctcgggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttcctc--agacaccttcctggcgccacccagcccggtccctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015977 1642 + 59248254 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGTCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGGTCAGGGCAAGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTAGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCTGGG-CCCCCCCCCCCCCCACCAATTCAACCTGTCCCTGTCCCC-GCTTCCAGCCCAAAGGTGTTAGAACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTTCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCGCTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCGTCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGCGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCcggcgcagtccctcagcctgaccacgttct-cctccctcgggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttcctc--agacaccttcctggcgccacccagcccggtccctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47122228 1643 + 51301725 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAGGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGCCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTAGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGATCAGGGCAGGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAgggcccccggggcagcctcgggccccccggcttcgccgccaccgccgccgtcccccctcgggcTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCTGGG--ccccccccGCCCCGCCAATTCAACCTGTCCCTGTCCCC-ACTTCCAGTCCAAAGGTGTTAGAACTGCTCAGATTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCTAGCCCTGCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTGCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACAttagtttttcttccttctcaaagCTTCTCTGAAAGCAATTTTCACCTCctgtctcattttccttctcctgaCCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGccctgatgtcctgccccgtccccctggctccccacccagtttgggggccccctgatccccctctccactgttcctcccccaGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCCGGTGCAGTCCCTCAGCCTGACCACGTTCT-CCTCCCTCGGGCTGTCTGCTCAGCCTGGAACACTGCCCTCTCATCCTCTACTTGGCCAGCTCCTAGGCCTTCTGTGGGTCTTAGCCCAAATGTC------CCTTCCTCAAAGACACCTTCCTGGCGCCACCCAGCCCAGTGCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829450 1629 + 50890351 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGCCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCCTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGATCAGGGCAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCAGGGCAGCCTCGGGCCCCCCAGCTTCACCGCCACCGCCACCGTCCCTCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCTCAGT--------------CCCCACCGCCAATTCAACTTGTCCCTGTTCCC-GCTTCCAGCCCAAAGGTGTTAGAACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTGCTTCCAATAGCTTACTGTCTAGCCCATGGGGCACCCCCAGATCCCTGCTCCAGCAGCTCCTCAGTCTAGGCCAACCCCACTCCACTCGTCAGC-----ACATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCTAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCAGCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCACCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCACCCTCGCCTCCACCTTTCAACCGGCGCACTGCCTCAGCCTGACCACGTT----CTCCCTCGGgctgtctgctcagcctggagcactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttccacaaagacaccttcctggcgccacccagcccggtgcctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406663 1584 + 49145316 CTTGCAGCTGTCAGAGGTCAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCATCCCTCTGATTCTGAGCGTATCCGGTGAGGGGCCGCAGGAAAGGGGGTTGGGC-TGGGACT--CGAGTCTTAGTGAGGAGGCAGGG---GACAGA-CCTGTGAGGCTGTGGGTCAAGGGGGCCAGGCCCCTGACCTGGGCTCCCCA----CTGAAGGTCAGCACTGCCCCAGGTCTTTCTGTACCAACCGCCCCCGCCGGGG-ATGCGTTTCTGAGCACTC--TTGATGAGGGCAGGAC----------------------TGGCAAGCAG------CTCACAC-----TGA--CCTTCCTGATGCTCCCACAGGCAGTACCTTCCCCGGAACCCCTGTCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACTGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCCGGGCCCCCCAGCCCCCTATCTAAATCAGCCTGTGCCTGTTCCC-GCTTCCAGCCCGGAGGTGTTAGAACTGCCTGGGTT------GAGGC--CAGTCGGCCGCAGCATGCCCCAGCCCCGCTTCCAGTGGCTCACTGGCTCACCT--GCAGCCCCTCCCCAGCCCTGATCCAGCAGCCC--CAGTCTAGGCTGACCCCACTCTGCTCATCAGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGC---------------------------------CCACCCTC--CCCCCCTTGGGAAATCTTCTGAATCGCCTCCTCTCCCAGCTCTCATCACACAGCAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAATTAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATTGGGTATGTTCTGTGCCCC-----------------AGATTGTCCAGCTGAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAG-CCTGATGT-CTGCCCTGTCCCCCTGGCTCCCCACCAAGTTTGGAGGGCCCCTGATCCCCTTCTCCACCTTTACTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGATGAGTTTGAGCAGGTGAGGGCCCCGCCTCCT-CTCTTCCTACTGCTAGGGTTGGGGTGGAGTCCCCAGGCTC--CAGGCAGTCCTTGCCAGcctctgctcccttgcttccacctttcaggtggtgcagtccctcggcctgaccaagctctgcttcactcaggctgtttgctcagccaggagaactg-cctttcctcctccagttggctggctcctaggcctcctgtaggccttagcccaaatggc------ccttcctc--agagaccttcccagagccacctggcccagtgtctc i calJac3.chr22 C 0 C 0 s mm10.chr7 3658241 1507 + 145441459 CCTGCAGCTGTCAGAGGTGAACATACCATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGTGAGGGGCT-GGAGAAAGGGCTGGGGAC-CGGGACTCCCCAGTCTGAGGGAGGAGCTGGTT---CCTGGGTCCTGAGAGAC--TAGGT--AGAGTACTCG---------------TCTCAAAGTGCTGAGGAC-----TTGACTTGGGGCTCCCTAAAGCAG--------G-TTGAA-GTGTGCTTCTGAACACTCTCCTG---AAGGCAGGGC----------------------TGGAGCTCAGAGCCTCCTGGCAC-----TAAATCCTCACTGGT----CCACAGGCAGTACCTCCCCCGGAACCCTTGCCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCAGCTCCGCCGCCACCGCTGCCATCCCCCCTCGGGCTGGAGGGGCGAGGTGGGTGTCCCACTGCGGCCACTGGGACCGCA-CCCCTCCCTA-TCCCAGTCTTGGG----------CCCCCTCAAATTAAACCTGACCCAGTCCCA--------------AAACATTCTAATTGCTAAGATTCAGGGAGAGGCTGCAGGCC-CTAGGCCATGTACAGTTTCCACTGCCAAGAGCT------CTCAGCT------------------CCTG----GGAAACCCTTTAGTTTAGGATAG-------TTGCTGAAGTGCAGTAGACACTCCCAAG---ACCTAGAGACCTCTGCAGAACTGTCTGAC---CTCTTAACTGCAGTGGGTCAG--------CCCCTCCCCATCTCCTCCTGAG---TTTTCTACTTCGTCTCCTTT--CAGCTTTCATTATGCATTAGTTTCTCTTCTTTCTCAAAGCTTTTCTGAAAGCAATTCTCACCTCCTGTCTCATTTTCTT----CTGACCA----T-GGTATGTTTTGTGCTCCCAGCACTGTCTCCAAGTGGACTCTCCA---CAGC--TGGTCTGTGGTGGGGGTCTGGGTCCAGCCCTGATGCCCTGCCCTTGTCCCCCTGCTAGCTACTCAATTTGGATACCTTCTGATCTTTC-CTCTGCATTTTCTTTCCCAGGGAACCAAGGCACAGTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCAGGTGAGGGGCCCGTCCAAC-CTGGGCCCACTG---GGGTATGGCTAGTGTACCCAATCCCAACCCTCAATCCTTGCTGGCCTTT-CTCCTTTG----------------GGCACAGTCCTGTAGACTGACCAAGCT---GGTTCCCTAAGTGGTTCACCTAGCCTGGGATACTGTC----CATCTCCCATTTGTCCATTTCTTAG---TGCTTTAGTTTTGAGT-----TGTCGTTACTGCTTCCAAAGAGAAGCCTTCTTGGAACT-----GCTAACTGCCTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19618615 1384 - 122678785 CCTGCAGCTGTCAGAAGTGAACATCCCGCTCTCGCTGGGCGTGTGTCCCCTGGGGCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCATATGCCCCACCCCTCAGACTCCGAGCGGATCCGGTGAGGGACC------AAGACCCCTGAGCGTGGGGAG--GCAGCCCTGATGGGGGGGTATGGTTCCCCAGT-CCTGAGACACTGTGTGA--AG-----------CTTGCTGCTGGTCCTCCA--TGCTG-GGGTGA---------TGGGTACCTGGAAGCTCCCTTGATCCG-TGGGGTGGGCGGCTGTGGTCAC-------ATCAGGTCTAGATTTCTACCCCCACCTCGAGACCGTGGGAATCAT------CAGGCACTAGAATAA--GCCTCCTCTCGT--CCACAGGCAGTACCTCCCCCGGAACCCCTGCCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACCGTGGAGTTCTACCAGCGCCTGTCGACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACAGGGACCGCACCCCCTCCCTGTCCCCAGTCCTGCC---CTCCCCTCACCCCCCAGGCAAACCTGTCCCCATCCCC-ACTTCA--------------------GCTCAGGCT-------AGGT--TTGTCCACTGTGG------------------------------GGGCTTG-----GGAGCCCCCGCCC-------CTCCGGCCTCC------TGTGGGTGTGCCCCGGTATCCGTCACAGT-----GCAGTCACGG---CCTCTGGAGGCCACTAGAGAACTGTCC--CCTCTGCATGACCCCAGGGAGTTA-GAACCAGCCCCACTCTCATCCTGCCCTGGGAAGCTTCCTGAACTGCCT---------GCTCTCAACACGCAGTAGTTTCTTTTCCTTCTCAAAGCTTCTCTGAAAGCTATT----------------------TCTTCCTGACCAGCAGT-GGTATGTTCTGTGTCCCCA--CCCATCTCCACCTGGACTGTCCAGCCCACCCTCGGTCTACGGCGGGGCCCGGG--TCAGCCCTGATGCCCTG-----TGCCCCTTGCCCCC--ACCAGTTTGGGGGCCCCCTGATCCTTGGCTCCTCCCTTCCTCCCCCAGGGCACAAAGGCGCAGTATCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGGTTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACAGATGAGTTTGAGCAGGTGAGGGCCCCTCGCTGTGCCCTGCCCAC--------------------CCCCAGGCCC--GTGGTCGTC--------------------------------------------------------------GTCCT-CTTCCTCCGGCCCCATTGCT---------------------GGTCCTCCCCTGGGGCATCACCATGG-----------------------TGTC------CCGTCCTC-----------CGGGGAGGCACCTGGCCTATCGTCTC i canFam3.chr1 C 0 C 0 a score=345932.000000 s hg38.chr19_GL949748v2_alt 128963 123 + 1064304 ccctttgcagtgctgggcacactcgcttggggtgtgggattttcccagtatgtgtccctgcaccaggctgtgggctctgctgccgagggaccttgat-ggcccccacttcacctccaggtccca s panTro4.chr19 59063019 123 + 63644993 ccctttgcagtactgggcacactcgcttggggtgtgggattttcccagtatgtgtccctgcaccaggctgtgggctttgctgcccagggaccttgat-ggcccccacttcacctccaggtccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55939729 118 + 60714840 cccctcgcagtgctgggcacactcgcttggggtgtggga-tttcccagtatgtgtccctgcgccaggctgtgggctctgctgcccagggaccttgat-g---cccacttca-ctccaggtccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705444 123 - 106955855 ccccttgcagtgctgggcacactcgcttggggtgtaggattttcccagtatgtgtccctgcaccaggctgtgggctctgctgcccagggaccttgat-ggcccccacttcacctccaggtccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59993021 123 + 64156825 ccccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgatgggcccccctttcacctccaggtccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55017619 123 + 59248254 ccccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgatgggcccccctttcacctccaggtccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47123871 122 + 51301725 CCCCTTGCAGTGCTGGGTACACTCGCTT-GGGTGTGGGATTTTCCCGGTATGTCTCCCTGTACCAGGCTGtgggctctgctgcccagggacCTTGAT-GGCCCCCCTTTCACCTCCAGGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46831079 122 + 50890351 ctccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgat-ggtccccctttcacctccaggtccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45408247 117 + 49145316 ccctgtgccgtgctgggt--actcactt-gggtgtgggattttcccagtgagtctccctgca-caggctgtgggttctgctgcccagggaccttgat-ggccctc--tccaccgccaggtccca i calJac3.chr22 C 0 C 0 s mm10.chr7 3659748 98 + 145441459 CACCATGCAGTCCTGGGTACTTTAGTTGGAAGCATGGGATTTTCTAGTTGGCATTTCCCAAACTTGAC----------------------CTCCAAT-GGCCCC---TTCTCCTTGATTTCCTG i mm10.chr7 C 0 C 0 e canFam3.chr1 19619999 0 - 122678785 C a score=1015057.000000 s hg38.chr19_GL949748v2_alt 129086 293 + 1064304 gcactcagcagggcaggggctc-------------agtgccgaaacta-ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggaaccaacctac-ctgggtttcagcccag-tccagctgggcgactctaggcaagtcactcgaacctctgtgtctcaattaacttatctgtaaaaatggggggaagaccacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- s panTro4.chr19 59063142 293 + 63644993 gcactcagcagggcaggggctc-------------agtgcggaaacta-ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggaaccaacctac-ctgggtttcagcccag-tccagctgggcgactctaggcaagtcactcgaacctctgtgtctcaattaacttatctgtaaaaatggggggaagaccacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55939847 293 + 60714840 gcactcagcagggcaggggctc-------------agtggggaaacta-gtttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggagccaacctac-ctgggtttgagcccag-tctagctgggtgactctaggcaagtcactcgaaactctgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705567 292 - 106955855 gcactcagcagggcaggggctc-------------agtggggaaact--ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCCTCTTGCA-AACactctggagccagccttc-ctgggtttgagcccag-tctagctgggtgactcgaggcaagtcactcgaacctctgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59993144 292 + 64156825 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA--TTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctgtgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55017742 292 + 59248254 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA--TTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctgtgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47123993 293 + 51301725 GCACCCAGCAGGGCAGGGGCTC-------------AGTGgggaagcta-tttttttttaatgggcttCTCAAGTGTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACACTCTGGAGCCAGCCTAC-CTGGGTTTGAGCCCAG-TCTAGCtgggtgactctgggcaagtcactCGAACCTCTGtgtttcaatttccttatctgtaaaaatggggGGAAGAAGACCTACCTAATGcagttgttatgaagattaaatgagttaataacgTGTAAGTACTTAATGGTGAC----TGCTACATAGTCAGtgtcatgga- i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46831201 293 + 50890351 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA-TTTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctctgtgtctcaaattccttatctgtaaaaatggggggaagaagacctacctaatgcggttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgtcatgga- i chlSab2.chr6 C 0 I 132 s calJac3.chr22 45408364 286 + 49145316 acaccca-----gcacaCACTC-------------AGTGGGGAAGCTTTTTTTTTTTTAATGGTCTTTCCAAGTTCTAA--------CAATTGGCAATTTATGCTTCTTGCA-AATactctggagccagcctac-cagggtttgagcccagctctagctgggtgacttcgggcaagtcacttggacc--tgtgtcttaatttccttatctgtaaaaatggggggaagaggccct-cctaatgcagctgttaggaagatttaatgagttagtaacaggtaagtacttgatggtgac----tgctgcatagtaagtgtcagga-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3659846 273 + 145441459 GCAAACAGCAGAGCAGGGG----------------------GAA-----GTCTGTTTAGTCAGCCTTCTTGAGTCTCAACCATTAGTTGATTGGAAACTCC-ACTCTCCCTA-AATATCCTGAAGCCAGCTGAt-c----------------acccgttgggtgatcttgggcaagtcaatcaagcctcttccttt--gtccccctatctgtaaaaatgggagtaacagaacccacctcatgcagttgttacaaggattaaatgagttaataacatgtaagta-ttgatggtgcctgcttgctatacagtgagcgtcatgaa- i mm10.chr7 C 0 C 0 s canFam3.chr1 19619999 299 - 122678785 ACACCCAGCAGATCAGGGGCTCCTCGGCAAACACAAACAGGGAAGCTG--TATTCTTTAATGACCTTCCCACATGGTGA--------AAATCAGAACTTCCTACTTGTTgcacaacactctgtggccaggctgtgttgggtttgaattcagctccagctgggtgaccttgggcaagtcgcttggacc----tgcctccatgcccttatgtataaacacgagctgacaa--accccatgtgtgcagttgttacaaggattagatgagttaatgacatgtgagtactctgtggtgcc----cgctctgtagt----aCCATGGGG i canFam3.chr1 C 0 C 0 a score=309739.000000 s hg38.chr19_GL949748v2_alt 129379 128 + 1064304 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTAGTACAAGGTCCTTGTCCTCAGAGAACTCA s panTro4.chr19 59063437 128 + 63644993 TTTTTTTTTTCAAATTACTTTCAGCTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTAGTACAAGGTCCTTGTCCTCAGAGAACTCA i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55940140 128 + 60714840 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705860 128 - 106955855 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTCCCACGAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTCAACCAGGAGAACTCA i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59993439 126 + 64156825 TTTTTTTTTCCAAATTACTTTCA----GTGTGTTCT-ACAGTGACGT----------TTTTTTTCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55018037 126 + 59248254 TTTTTTTTTCCAAATTACTTTCA----GTGTGTTCT-ACAGTGACGT----------TTTTTTTCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47124290 125 + 51301725 tttttttttccaaattacttTCA----GTGTGTTCT-ACAGTGACG-----------tttttttCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i papAnu2.chr19 I 4 C 0 s calJac3.chr22 45408650 127 + 49145316 atttttTTTTCAAATTACTTACAGTTGGTGTGTTCT-ACAGTGATT-----------TTTTTTCCCCACCAAAGAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAA-TATTGCAAGGTCC-TGTCCTCAGAGAACTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3660119 120 + 145441459 ----ttttt----attGCTTTCAGTTGGTGTGTTTTAACAGTGGCTTTCCCCATGCACATTTTCCTTACCATACACATTTTCCAGGTACCAAGCTGGGCCTCATCA--------------------ATCCCCATTCTCACAGAAATCT i mm10.chr7 C 0 C 0 s canFam3.chr1 19620298 108 - 122678785 GTGTTGGCTTCTGATAACTTCTAATTGTTGTGTTCC-ACAATG---------------GTTTTTTCTACCCAATAT--TTGCCTG-----ATGCCAAGTTC-----------TGAA------CAAGGCCTCTATCCTCAGAGAACTCG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46831494 132 + 50890351 I a score=5135684.000000 s hg38.chr19_GL949748v2_alt 129507 1312 + 1064304 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCACTTAAGACATTCATTT----AGAACCTAGGTCCTCTCCCATTG--TGTCCTCAGATGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagactgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACT--CACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGTTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgaggatgga---tgagagtgtgtgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAGTGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCCGTCTCGTCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGACCTCTCAGCTGCTTCCCTCCGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGTGGGGAGAGGAGTGAGGTCAGAAAG s panTro4.chr19 59063565 1316 + 63644993 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCACTTAAGACATTCGTTT----AGAACCTAGGTCCTCTCCCATTG--TGTCCTCAGACGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGGCCCGAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagactgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGTTCTGGCAGCTGGCTTCGGTGGaacctctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgagggtgga---tgagagtgtgtgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCGTCGTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55940268 1316 + 60714840 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCATTTAAGACATTCATTT----AGAACCTAGCTCCTCTCCCATTG--TGTCCTCAGACGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGACCCGAAACCATCCTCCAACTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActgtgagactgttccattctctagaacaagggtgacagtacccgctgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGCTCTGGCAGCTGGCTCCGGTGGaacctctctgcggccccctccgtttcctcctcgctgaagt-ggcgtgataa-catttcctacccaagaagaacctcgtgagggtgga---tgagagtgtgcgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCGTCTTCTTCCGGCTGACCCTCCTGTAGTGTCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCGGCTGCTTCCCTCTGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705988 1311 - 106955855 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCATTTAAGACATTCATTT----AGAACCTAGCTCCTCTCCCATTG--TGTCCTCAGACGTTAACTACAGACTTCCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAGTTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGAtt-----tttgagactgttccattctctagaacaagggtgacagtacccgctgcctcaaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGCTCTGGCAGCTGACTTCGGTGGaatctctctgcggccccctccgtttcctccttgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgagggtgga---tgagagtgtgtgcgtgcagggcagttggcccagtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCACCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGCAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCTTCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCCGCCCGAGCCCTCTCACCTGCTTCCCTCCGCAGCCGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59993565 1307 + 64156825 GTTCCCTCTCCT--A-GTTTTCCCAGGTTGCCATCTTTG-ATGCATTTAAAACATTCATTC----AGGACCTAGCTCCTCTCCCACTG--TGTCCTCAGACATTAACTACAGACTTCCTGTCCTTTCCTGGTTTGCCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctatgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCATGCCTGGTGCTGGTGCTGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggc---ataa-catttcctacccaagaagaaccctgtgagggtgca----gtgagtgtgcgcatgcagggcagttggcccggcgcctgacacacCTACAGCCCTAAGAACTGTCCCC-TTTGGCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGCGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCA-GGGGCA-CCCCCTCTCCCAGGAAGCAGGGA-GGGGCCGGGAGGCT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAG----CTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCAGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55018163 1309 + 59248254 GTTCCCTCTCCT--A-GTTTTCCCAGGTTGCCATCTTTG-ATGCATTTAAAACATTCATTC----AGGACCTAGCTCCTCTCCCACTG--TGTTCTCAGACATTAACTACAGACTTCCTGTCCTTTCCTGGTTTGCCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCGCACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgaccgtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctatgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCATGCCTGGTGCTGGTGCTGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccctgtgagggtgca----gtgagtgtgcgcgtgcagggcagctggcccggcgcctgacacaCCTACAGCCCTAAGAACTGTCCCC-TTTGGCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGCGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCA-GGGGCA-CCCCCTCTCCCAGGAAGCAGGGA-GGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTG-CCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAG----CTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCTGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47124415 1316 + 51301725 GTCCCCTCTCCT--A-GTTCTCCCAGGTTGCCATCTTTG-ATGCATTTAAGACATTCATTC----AGAATCTAGCTCCTCTCCCACTG--TGTCCTCAGACATTAACTACAGACTTcctgtcctttcctggtttggcCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGACTCTGAGCCTGTTCCATTCTCTAGAACAAGGGTGACAGTACCCACTGCCTCGAGGtctttgtgaagattaaatg---ctA-----------------GGCTGTGCATCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCACGCctggtgctggggctggggccccGCTCTGGCAGCTGGCTTCGGTGGAAC--CTCTGCGGCCCCCTCCGTTTCCTCCTCGCTGAAGT-GGCATGATAA-CATTTCCTACCCAAGAAGAACCTTGTGAGGGTGCA----GTGAGTGTGGGCGTGCAGGGCAGTTGGCCCGGTGCCTGACACACCTACAGCCCTAAGAACTGTCCCC-TTTGTCTGTCGGTCCGGCCCAGATCCCAGACCACCACCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGcccctccctctacc------caccccctt----ccccccgcatgctgatccccctgcccaggtgagggccctgccctgGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCccaggaagcaggga-ggggcCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGgctg-cccctcctcccctccccagtgAGGGACATTTTTTGGTAAAcctattttcattttggaaaatatttatgaataaatagtTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46831626 1316 + 50890351 GTCCCCCCCCCT--G-GTCCTCCCGGGTGGCCACCTTGG-AAGCA-TTAAGGAAATCATTC----CGGACCCAGGTTCCTTCCCCATG--GGGCCTCAGGCCATAAATTAAGGCTTTCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGCCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgacagtacccactgcctcaaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCACGCCTGGTGCTGGGGCGGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcataataa-catttcctacccaagaagaaccttgtgagggtgga----gtgagtgtgcgcgtgcagggcagttggcccggtgcctgacacaCCTACAGCCCTAAGAACTGTCCCC-TTTGTCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGCGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCTCTCTCCCAGGAAGCAGGGAGGGGGCTGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCACCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTACATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTCCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i chlSab2.chr6 I 132 C 0 s calJac3.chr22 45408777 1296 + 49145316 GTCCTCTCTCCT--A-GTTCTCCCAGGCTGCCATTCTTGAAAGCATTTCAGACGTTCATTCATTGAGAAGCTAGCTCCTCTCCCATCG--TGCCCTCAGACATTAACTACTAACCTTCTATCC-TTCTTGGTTTGGCCCAGAACCATCCTCCAAGTTAGCACATTTCAGGGCATCCAGTCACTC--AAATTCCCACACCTCTACCACCGCC-ATAAA--A----TGTCCCTGCAGAATGCTTAGATTTAGGc--tgagcctctcccattctttagaacaagggtgacagtactcactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggccgtgcatCCTGTACTTGCACGAGAGAGGTGCTCAAAAGCCACAGCCCTCGAGAATA--CGAAGGCCTTGTACTCACAC------CTGGAGCTGGGCCC-------------------CGGTGGaacctctctgcagttccctccgtttcctccttgatgaagcgggcatgataa-tgtttccaacccaagaagaaccttgtgagggtgga----atgagtgcgcgtgtgcagggcagctggcccagtgcctggcacatccgcagccctaagaactgtCCCCTTTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCTTCGTCCACTCACTGACCGCCTTCTCCCCTGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCTTCTACC------TACCCCCT------CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGCAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCTGGGAGG-T-----TTCCTTTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAGTGAGCAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCGGCGGTCATCTGTCTCTTCCTCTTCTGTCTTACCCTCCTTTGGTGCCCGGCCTTGGACCTGGGCCAGCAAGGCCTCCGCTCGAGCCCTCTCAGCCGCCTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCAGGGAGAGGACTGAGGTCAGAAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3660239 1149 + 145441459 GTTCTGTCCTCT--ATATTCTTCCAGACCAC----TTTG-AAGCATTTCAGACAT----------TTGACCTAGCTGCTTTCTTGGTGTATGCGCTCCAACCTTGACATCAGTCTTCCTATCCTGCCCTGCTTTGGTCCTTGACA------------CGAATATCTTAAGGCATTGAGTCCCTCAGAA--TCTCA----------GTTA-CAGTGAAGTG----TGTATCTCCAGAGTGCT-------AGATGGTACATATGTTGCAT--TGTAGGCCACCTGT--TGGTCCCTACT-CCTCAGTGTC---------ACTTAATAACCTTA-----------------GGCCTTACGT-TTGTAC------------------------CTGCAGCCCATG-----------------------------------TGGGGCAAAGGCCAGGCT------------------------------TGGCCCCC------TTCTTCACTCTTAAGA------------------TCACCAAGGGA----------AGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTT-------CCATGCCCCTGACAACTA--CCT-CTTGTCCATCTGCCTGGCCCAGATCTCAGTCTCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCC--CCCTCTACC------CTCTCCCT------CCCTCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGG-GGGAGGCCCAAGGCCATGGGACA-CCCTCCCCCCCAGGAAGCAGGGAAGGGATAGGGAGGTTTTCTCTTCCTCTCTGCCCTACCCTGGGGGCCTGGGGGCAAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCTGAGGCCTCTCCTA---TCCCCACAAGAGAGTTCAGTGGGCAGGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCCACCTGGCCTTGCTGGGATACCTGGCCTTGTACCCGGGCCAGCAGGGCCTCTGCTCGAGCTCTCTCGGCTGCTTCCCGCTGAAGACGCTCAGCACGGAGCTTTTCTAGGGAAGGTGGCCTGCAGGGAGGAAAGCAAGAACAGAAAG i mm10.chr7 C 0 I 12 s canFam3.chr1 19620406 1260 - 122678785 GTCCCCTCCCCTCAG-TTCTTTTCAGGT-----TCTTTG-CAGCATCTCAGATACTGATGC----AGACCC--GGCCCTTTCCCCGTG--TCCTCTCTGACATTAA--GCAGACTCCCCTCTCTATCCTGGCTTGGGCCAAAGTAATCCTCCAAGTC----CACGGCAAGGCCTCCC-TCCTTCAGAAACACCCACGCCACCACTGTCACCAATAAA--ACATCTATCCCAACAGCGTGCCTGGACTTAGACTC--AGCCTATTCCATTCTCTAGGATG-GGGTAACAG---------CCTCGGGGT-TGTGTGAAGGTC-AATG---CTAGCAGCACACAGCTCGAGGGCTGAGCACCAGCTCCT------------GTGCTCAAGCGCCGCAGCCCTCGGGAGAAGTCAGATGCTGTGTAAATGTGC------GGGGGACTGAGGCCCCAT-------GCTGGCCTTGGTG------CGCCTCTGCCTCCCCGGTTCCTT------TAAAGGGGGCAGGAGAATCTTTTCCTGACCAAAAAGAGCCTGGTGAGGGTGGAAGGAGCTGGCACGTGCATGCAGGCCGCTGGGCCTGGTACCTGGCACGTCCCTGGCCCAGAGATCCGTTTCC-TCTGTCTGTCGGTCCGGCCCAGATTCCTGGCCACCTGCTCGTCCACTCACTGACCACCTTCTCCCCTGGGCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGGCCCTCCCTCTAcccccgcgcgcccccccgcccccccccgcATGCTGACCCCCCTGCCCAGGCTAGGGCCCGGCCCTGGAAGACTGG-GGGAGGCCCCAGGCCTTGGGGCAGCCCTCACCCCCAGGAAGCA---------------------------------GCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCTGCGGCCTCTCCTC---TCCCCCCAGGAG---TCAGTGAGC---GCTGGGGTCTTGCTGGTGGGG-CGCCGGGCCCACTGGGGATTGAACTGGGAGTTGTACCGCCTCCGCCGTTCATCTGTC---TCCTCCTCAGGCTGCTCCTCCTGGGGGGTTGTGCTCCGGACTCGTGCCAGCAGGGCCTCTGCCCGAGCCCGTTCTGTTGCTTCCCGCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGGGGTCTGGGGGGAGAACACTCAGGTCAGAAAG i canFam3.chr1 C 0 C 0 a score=243658.000000 s hg38.chr19_GL949748v2_alt 130819 83 + 1064304 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCATCCAGCACACC s panTro4.chr19 59064881 83 + 63644993 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCATCCAGCACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941584 83 + 60714840 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCGTCCAGCACGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707299 81 - 106955855 CTGGTAGCCCCTAGGAGGCCATT-GCCCAGCCTCTCCCACAGAGGGAGCTG--CCACCT-GAAGCCCCCCTGCATCCAGCATGCC i nomLeu3.chr10 C 0 M 197 s rheMac3.chr19 59994872 83 + 64156825 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCGTCCAGTACGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019472 83 + 59248254 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCGTCCAGTACGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125731 83 + 51301725 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCATCCAGTACGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46832942 83 + 50890351 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCATCCAGTACGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410073 60 + 49145316 CTGGTAGCCCCTAGGAGGCCGTTCCCCCAACCTCTCCC--AGAGGGAGCTG--CCACCAGGAAC--------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19621666 76 - 122678785 CTTATAGCCCCTAGAGG-------TCCCACTTTCCCCCA-AGAAGGAGCTGCCCCACCTGGAACCCCGTCCACCTCTA-CCTGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3661388 12 + 145441459 I a score=178724.000000 s hg38.chr19_GL949748v2_alt 130902 92 + 1064304 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGCAGCC-ACTTGGTGCTGGGACGCCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGGCTTTGGT s panTro4.chr19 59064964 91 + 63644993 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGAAGCC-ACTTGGTGCTGGGACGCCATGGGCATGTCTCTGGCCTTCCCTTCTGT-GGCTTTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941667 92 + 60714840 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGAAGCC-ACTTGGTGCTGGGACGCCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGGCTTTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59994955 91 + 64156825 CCAGCCTCAGCT-CTCAGGTCTTCTAC-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCTTTCCCTTCTGTGGACTTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019555 91 + 59248254 CCAGCCTCAGCT-CTCAGGTCTTCTAC-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125814 91 + 51301725 CCAGCCTCAGCT-CTCAGGCCTTCTGG-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833025 91 + 50890351 CCAGCCTCAGCT-CTCAGGCCTTCTGG-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410133 80 + 49145316 CCAGTCTTGGCTCTTAGGGCCTGCTGG-AAGAAGCC-GCCGGGGGCTGGGACGCCATGGGCG------------TCCCTCCTGTGGGCTTCAGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19621742 71 - 122678785 CTGGTCTGAG------AGGTTTGTGGGTAGGAAGCTGGCCTCATGCTGTG----CAAGGACCCAGGACT-GCCATCACTGCC------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3661388 12 + 145441459 I e nomLeu3.chr10 102707380 197 - 106955855 M a score=146355.000000 s hg38.chr19_GL949748v2_alt 130994 56 + 1064304 CCTCCCCAGTCTTTA----------AAATCTGATGCTTCTCCAGGTCAAGAA--AGCACACTTAGCAG s panTro4.chr19 59065055 56 + 63644993 CCTCCCCAGTCTTTA----------AAATCTGATGTTTCTCCAGGTCAAGAA--AGCACACTTAGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941759 56 + 60714840 CCTCCCCAGTCTTTA----------AAATCTGATGCTTCTCCAGGTCAAGAA--AGCACACTGAGCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59995046 56 + 64156825 CCTCCCCAGTCTTTA----------AGATCTGATGCTCCTCCAGGTCAAGAA--AGCACAAtaagcag i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55019646 56 + 59248254 CCTCCCCAGTCTTTA----------AGATCTGATGCTCCTCCAGGTCAAGAA--AGCACAAtaagcag i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47125905 56 + 51301725 CCTCCCCAGTCTTTA----------AAATCTGATGCTCCTCCAGGTCAAGAA--AGCACAATGAGCAG i papAnu2.chr19 C 0 I 10 s chlSab2.chr6 46833116 56 + 50890351 CCTCCCCAGTCTTTA----------AAATCTGATGCTCCTCCAGATCAAGAA--AGCACAAtgagcag i chlSab2.chr6 C 0 I 10 s calJac3.chr22 45410213 56 + 49145316 CCTCCCCAGTCTTTA----------AAATCTGATGGTCCTCCAGACCAAGAA--AGCACATGGGGCAG i calJac3.chr22 C 0 I 9 s mm10.chr7 3661400 66 + 145441459 CCTACCTGGTCCTTGGACTCACTGCAAGGCCTATGTCCCTTCAGGTCAAGAA--TGCCCACTGAGCAG i mm10.chr7 I 12 I 1 s canFam3.chr1 19621813 39 - 122678785 ----------------------------CCTGATGCCCCTCCAAATCATGAGCTATGATGATGAGCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102707380 197 - 106955855 M a score=96993.000000 s hg38.chr19_GL949748v2_alt 131050 27 + 1064304 CCCCCTGGCCCTCAGTTTCCCTTTCTA s panTro4.chr19 59065111 27 + 63644993 CCCCCTGGCCCTCAGTTTCCCTTTCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941815 27 + 60714840 CCCCCTGGCCCTCAGTTTTCCTTTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707578 27 - 106955855 CTCTCTGGGCCTCACTTTCCCTTTCTA i nomLeu3.chr10 M 197 C 0 s rheMac3.chr19 59995112 27 + 64156825 ctctctgggcctcagtttccctttcta i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55019712 27 + 59248254 ctctctgggcctcagtttccctttcta i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47125971 27 + 51301725 ctctctgggcctcagtttccctttcta i papAnu2.chr19 I 10 C 0 s chlSab2.chr6 46833182 27 + 50890351 ctctctgggcctcagtttccctttcta i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45410278 27 + 49145316 CTCCCTGGGCCTCAGCTTCCCGTTCTG i calJac3.chr22 I 9 C 0 s mm10.chr7 3661467 27 + 145441459 ATCCTGGGCCCCCTGTATCATTTTCTA i mm10.chr7 I 1 I 1266 s canFam3.chr1 19621852 27 - 122678785 CAGCCAGGACCTCAGTTTCTCCTTCTG i canFam3.chr1 C 0 C 0 a score=396349.000000 s hg38.chr19_GL949748v2_alt 131077 169 + 1064304 GAGGA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGACAGAAGCCTGC-TTTTACTCTC-TAACCcagcagctctcaaactctttggtctcaggacccc----tttatactcttaaaaaccaaggaccccaagagcttttgtttaaatgggt s panTro4.chr19 59065138 169 + 63644993 GAGAA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGACAGAAGGCTGC-TTTTACTCTC-TAACCcagcagctctcaaactctttggtctcaggacccc----tttatactcttcaaaaccaaggaccccaagagcttttgtttaaatgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941842 169 + 60714840 GAAAA-AAGAAGACTACAGGC-AGTATACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGATATAAGCCTGC-TTTTACTCTC-TAACCcagcacctctcaaactctttggtctcaggacccc----tttatactcttaaaaaccaaggacctcaagagcttttgtttaaatgggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707605 169 - 106955855 GAGAA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGATACAGCATCCTGGAGATAGAAGCCTGC-TTTTACTGTC-TAACCcagcggctctcaaactctttggtctcaggacccc----tttatactcttaaaatccaaggaccccaagagcttttgtttcaatgggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995139 157 + 64156825 gagaa----aagagTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTA--------TGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019739 157 + 59248254 gagaa----aagagtacaggc-agtgtaccccctctAGACCAGGGGTA--------TGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125998 160 + 51301725 gAG------AAGAGTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTACAGCATCCTGGAGAC--AAGCCTGCTTTTTACTGTCTTAACCCAGCAGCTCTCAAAC----TGGTCTCAGGATGCC----TTTATACTCTTTAAAACTGAGGACCCTAAGAGCTTTTGTTTAAATAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833209 165 + 50890351 gagaa----aagagtacaggc-agtgtaccccctctAGACCAGGGGTACAGCATCCTGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410305 153 + 49145316 GAGAAAAAAAAGATTACAGGC-GGC-------------------GGGACAGTATCCTGGGGATAGAAGCCTGC-TCTTACTCTC-TAACCcagtggttctcaaactctttggtcccaggacacacgcgtttatactcttaaaaa--gggggtcccaagagcgtttgtttcaatgggt i calJac3.chr22 C 0 M 842 s canFam3.chr1 19621879 107 - 122678785 --------------TAGGAGCTAGGAGACCTGCTC--------AGGTTTGTCCTCCTTGGGACACAAACCTGC-TCTGAC-----TGACCCCGTGGTTCTCAAAC-----------------------T-------------------AGACCCCAGAAAGCTTTGTGTCAGTGGGT i canFam3.chr1 C 0 I 4 e mm10.chr7 3661494 1266 + 145441459 I a score=814687.000000 s hg38.chr19_GL949748v2_alt 131246 357 + 1064304 t----ctcttaatatgctgcaaatcattagtgaaaactaagaaagtttGGacacaagcatc--tgccattggccatcagagtgagggtgtctccccatcacacagcctc--tggaaacctgcactacatgcctgagaacacgagtggaaaagtccaccag----tg-tcaggaaaataggcttgacaccacagcaccccgggaaaggg-tgtcaggacccctagggctccctggaccacatgctgagaaccactTCTCCACCTAGCCAGCCCTTCACGGAGTCCCTGGCTGTCCTGACCAGAGACGCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG s panTro4.chr19 59065307 361 + 63644993 t----ctcttaatatgctgcaaatcattagtgaaaactaagaaagtttGGacacaagcatc--tgccattagccatcagagcgagggtgtcttctcatcacacagcctc--tggaaacctgcactacatgcctgagaacacgagtggaaaaggccaaaagtgtttg-ttaggaaaataggcttgacaccacggcaccccgggaaaggg-tgtcaggacccctagggctccctggaccacatgctgagaaccactTCTCCACCTAGCCAGCCCTTCACGGCGTCCCTGGCTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAGGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942011 357 + 60714840 t----ctgttaatatgctgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatc--taccattagccatcagagtgagggtgtcttctcatcacacagcctc--tggaaacctgcactacgtgcctgagaacgcgagtggaaaaggccaacag----tg-ttaggaaaataggcttgacaccacggcaccccgggaaaggg-tgtcaggacccctaggcctccctggaccacatgctgagaaccactTCTCCACCCAGCCAGCCCTTCACGGAGTCCCTGGCTGGCCTGACCAGAGACCCTGCAGTGTCCATGCTGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707774 348 - 106955855 t----ctgttaatatgttgcaaatcag-agtgaaaactgagaaagtttGGacacaagcgtctgtgccattagccatcagagcgagggtgtcttctcatcacacagcctc--tggacacctgcactgcgtgcctgagaacacgcgtggaaaaggccaacag----tg-ttaggaaaataggcttgacacctcggcaccccgggaaaaggctgtcaggacccctagggctccctggaccacatgctgaga-----------accCAGCCAGCCCTTCAGGGAGTCCCTGGCCGTCCTGACCAGAGACCCTGCAGTGCCCATGCCGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCTGAGGCGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995296 359 + 64156825 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccgtcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaatgcgagtgaaaaaggccaacag----tg-tcaggaaaataggcttgataccacggcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019896 359 + 59248254 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccatcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaatgcgagtgaaaaaggccaacag----tg-tcaggaaaataggcttgataccacggcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126158 359 + 51301725 TCTACCTGTTAATATACTGCAAATCAGAAGTGAAAACTAAGAAAGTTTGGACACAAGCATCTGTGCCATCAGCCATCAGAACGAGGGTGTCTTCTCATCACACAGCCTC--TGGAAACCTGCACTATGTGCCTGAGAATGCGAGTGAAAAAGGCCAACAG----TG-TTAGGAAAATAGGCTTGATGCCACAGCACCCCGGGAAAGGG-TGGCAGGACCCCTGGGGCTTCCTGGACCACATGTTGAGAACCACTTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAACCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833374 359 + 50890351 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccatcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaacgcgagtgaaaaaggccaacag----tg-ttaggaaaataggcttgataccacagcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGGCCATGCTAGGCTACTGCCAAGCCCTGAAAGTCTGGACCCTGGTCTGCCGAGG-AGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19621990 257 - 122678785 ----TCTATTGCTATTTTGCA---TAGAAGCG-------AGAAAACCTTGAAACAAGGTTA--CGTCCCCAGTCACCACA------GTGTCTCTTCA-CGCCCTGTCTCTTTAGAAGC---CACTGGACAATCAAGGCT--GAGTG--AAGGGTCACAGG----GGCTCAGGAAAACCAGCTTGCCTCTGCAG-ACCCCCTGCTAGGG-CGTTGGAGCCCCAAAG----------CCACACGTGGCGAGCCGCCTCCCCAGGCCCCCAGCCCCTCAC---------------CCTGA------------CAGCACCAATGCA-----GCTGCCCA------------------------------------ i canFam3.chr1 I 4 C 0 e mm10.chr7 3661494 1266 + 145441459 I e calJac3.chr22 45410458 842 + 49145316 M a score=999202.000000 s hg38.chr19_GL949748v2_alt 131603 286 + 1064304 GT----CTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGACTGCCTTCATCACCGCCGTGCTGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG s panTro4.chr19 59065668 286 + 63644993 GT----CTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGATTGCCTTCATCACCGCTGTGCTGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCTGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCACTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942368 290 + 60714840 GTCTTCCTTCTTACTTCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCAATTGCCTTCATCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGAGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCCTTCTCTTGTCTCTCCTGAGGGGGCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708122 290 - 106955855 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGATTGCCTTCATCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAAGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995655 290 + 64156825 GTCTTCCTTCTTACTCCTTGGGTCGCAGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAACTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGAGGGGGCC---CCCCTCGCTCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020255 290 + 59248254 GTCTTCCTTCTTACTCCTTGGGTCGCAGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGAGGGGGCC---CCCCTCGCTCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126517 287 + 51301725 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGacccctc---cttttcctttctgctgcaATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGCGGGGGGC---CCCCTCGCTCCGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833733 290 + 50890351 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGCGGGGGGC---CCCCTCGCTCCGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCTGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3662760 277 + 145441459 GT----ATTCTTACTCTCGGGGTCGTTGTTTCTGAGG---------CCGTTCCTCTCTGGAAGGACGGCTT---TCACTGCTGTGC---CTTTTCTTTGCCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTTGATCTTCTCATCTGGGCTTGGGCCTGGAGGGCAGCAGTCCTTTTGCCCTGGGGGGAGCTGGTACCAAGGAGGCTGAGTTTGGGCCTCTGCTGCACTCTGGCCCAAGTAAGTCAGGATACCTAGTGCTTTCTCTTGTCTCTCCTGCAGAGGCAAG i mm10.chr7 I 1266 C 0 s canFam3.chr1 19622247 285 - 122678785 -----CTTCCTTACACTTCAGGCCGCTGCTTCTCAGGCTTCTC---CTTCCCCTTCCTGCCATGGCCACCATTGTCCCCACTGTGCCGTCTCTTCCTCCTCAAGTGCTTCTGTATCTCCTGTAGAGGGTCCAGGCGGTTCTTGATCTTTTCATCTGGACCTGGGCTGAGCTGGGGGG---CCCCTTGCCGTGGGGGTAGCTGATACCAAGGCAGCTGAGTCTGGGCTTCTGCTGCACTCTGGCCCAGGTAGGTCAGGATGCCCAGAGCTTTCTCCTGCCTCTCCTGAGGGGGACAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45410458 842 + 49145316 M a score=142995.000000 s hg38.chr19_GL949748v2_alt 131889 46 + 1064304 GAAATACAAGAGATGTGATATAATCTTTCAAGGTGTC--AGGTGTGTC s panTro4.chr19 59065954 46 + 63644993 GAAATACAAGAGATGTGATGTAATCTTTCAAGGTGTC--AGGTGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942658 46 + 60714840 GAAATACAAGAGATGTGATATAATCTTTCAAGGTGTC--AGGTGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708412 46 - 106955855 GAAATACAAGAGATGGGATATAATCTTTCAAGCTGTC--AGGTGTGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995945 46 + 64156825 GAAATACAAGAGATGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020545 46 + 59248254 GAAATACAAGAGATGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126804 46 + 51301725 GAAATACAAGAGATGGGATATAATCTTCCAAGGTGTT--AGGTGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834023 46 + 50890351 GAAATACAAGAGCTGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411301 46 + 49145316 GAAATAAAAGAGATGGGATATAATCTTTCAGGGTGTC--AGGTTTATC i calJac3.chr22 M 842 C 0 s mm10.chr7 3663037 46 + 145441459 --AAAACAAAATAGTCTTTTCAGTCCCTCTGGGAGCCCTAGATGTGGC i mm10.chr7 C 0 I 98 s canFam3.chr1 19622532 30 - 122678785 --------AAAGAGGGAA--------CTGAGGATGTC--AGCGATGTC i canFam3.chr1 C 0 C 0 a score=305095.000000 s hg38.chr19_GL949748v2_alt 131935 124 + 1064304 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATCTAAGGCTTGT----------------TATGAACCAGTTGGACCAGGTGCTGGGGATGGAAGACA--AACAGAGGCAAAGCTCC--CCCT-GGGGGGACAGTAGCAGGTACAG s panTro4.chr19 59066000 124 + 63644993 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATCTAAGGCTTGT----------------TATGAACCAGTTGGACCAGGTGCTGGGGATGGAAGACA--AACAGAGGCCAAGCTCC--CCCT-GGGGACACAGTAGCAGGTACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942704 127 + 60714840 TCCCTGACACAGG------TATCTAAGCGaacag-gtatctaaggcttgt----------------tatgaaccagttgtaccaggtgctggggatggaagacaccaacagaggccaagctcc--ctCTGGGGGGGACAGTAGCAGGTACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708458 126 - 106955855 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATGTAAGGCTTAT----------------TATGAACCAGTTGTACCAGGTGCTGGGGTTGGAAGACACCAACAGAGGCCAAGCTCC--CCCT-CCGGGGACAGTAGCAGGTACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995991 121 + 64156825 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAG-----G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020591 121 + 59248254 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGAGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAG-----G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126850 126 + 51301725 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGACCGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAGGTACAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834069 126 + 50890351 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGTTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAGGTACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411347 112 + 49145316 TCCCTGAC----------------------ACAG-GTATCTAAGGCCTAT----------------GGTGAAGCAGCTGTGCCAGGTGCTGGGGAGGGAAGAGACCAGCAGAGGCCAAGCTCCTGCCCT-GGGGTGACGATAGCAGGGACAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19622562 131 - 122678785 TCC---ACTCAGGGAGCCCTACCTGTGACAACAGAATCCCCCAGGCTCCTGGACAGGTAGAAGCAGCATGAGTCAACTCAGCCATTTTT------CCAAGGACA--------GGTGGGCCTCC--TGCA-CTGGGCAGAGTGTCAATTCAA- i canFam3.chr1 C 0 C 0 e mm10.chr7 3663083 98 + 145441459 I a score=351898.000000 s hg38.chr19_GL949748v2_alt 132059 114 + 1064304 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCGAT s panTro4.chr19 59066124 114 + 63644993 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942831 114 + 60714840 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGGAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGAAGCGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708584 111 - 106955855 TAAC----AGCA-GGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGC--AGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGGGAAGCGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996112 114 + 64156825 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020712 114 + 59248254 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126976 114 + 51301725 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834195 111 + 50890351 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTAAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGC--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411459 96 + 49145316 TCACAGAAAGCAGAGGAAGGAGGGGATGGGGTGGAGCTGCCTGAAT----GTTCAGAGGCAGGCATCTTTGC-------------------------AGGGAG-CAAGCAAAGCAAGAGGACCCGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3663181 114 + 145441459 TATC----TGCAGGAGGAGGAAGAAAG-AGAGGCTGCGGCCTGTGCAGTAGTGAAGATGGGAGAAGCTTTGGGAACAG-T-TTAAGGAAAAACCTGCAGAA----AAGCAAAGT-GGAGGAGTGAT i mm10.chr7 I 98 I 254 s canFam3.chr1 19622693 119 - 122678785 TAACAAAAAACACAAGGGGGAAGGACA-GGGTGCAGCTGCTTTAGG----GTTCAGAGGCA-GCATCTTTGGGGAGATACTTTAAAGATGAACCTGAAAGCCCGCCAGCAAGGC-AAAGGAGTGAG i canFam3.chr1 C 0 C 0 a score=105273.000000 s hg38.chr19_GL949748v2_alt 132173 32 + 1064304 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT s panTro4.chr19 59066238 32 + 63644993 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942945 32 + 60714840 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708695 32 - 106955855 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996226 32 + 64156825 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020826 32 + 59248254 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127090 32 + 51301725 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834306 28 + 50890351 ----GGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411555 32 + 49145316 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i calJac3.chr22 C 0 I 12 s canFam3.chr1 19622812 49 - 122678785 --GCGAGACAAAGGCAAGTTCAGAGTTTGGTGGGAACCCCTGAAAGTGGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I a score=32452.000000 s hg38.chr19_GL949748v2_alt 132205 11 + 1064304 AAATGACAAGA s panTro4.chr19 59066270 11 + 63644993 AAATGACAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942977 11 + 60714840 GAGTGACAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708727 11 - 106955855 GAGTGACAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996258 11 + 64156825 GAGTGACAAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020858 11 + 59248254 GAGTGACAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127122 11 + 51301725 GAGTGACAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834334 11 + 50890351 GAGTGACAAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19622861 11 - 122678785 AAGTGACAGGA i canFam3.chr1 C 0 I 90 e mm10.chr7 3663295 254 + 145441459 I e calJac3.chr22 45411587 12 + 49145316 I a score=297474.000000 s hg38.chr19_GL949748v2_alt 132216 126 + 1064304 GCTGATGTACCtc---ttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcccaggttcaagcaatcctcctacctcagcccc s panTro4.chr19 59066281 129 + 63644993 GCTGATGTACCtctttttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcctaggttcaagcaatcctcctgcctcagcccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942988 127 + 60714840 GCTGACGTACCGC--tttttttctgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcccaggttcaagcagacctcctgcctcagcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708738 126 - 106955855 GCTGAGGTACCtc---ttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcagctcactgcaacctctgcttcccaggttcaagcaatcctcctgcctcagcccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996269 127 + 64156825 GCTCATGTACCTG--tttttttttgagatgcagtctcgctctgttgcccaggctcgagtgtagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020869 127 + 59248254 GCTCATGTACCTG--tttttttttgagatgcagtctcgctctgttgcccaggctcgagtgtagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127133 126 + 51301725 GCTCATGTacctg---ttttttttgagatgcagtctcgctctgttgcccaggctctagtgcagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834345 126 + 50890351 GCTCATGTACCTG---ttttttttgagatgcagtctctctctgttgcccaggcttgagtgcagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i chlSab2.chr6 C 0 I 4359 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e calJac3.chr22 45411587 12 + 49145316 I a score=295792.000000 s hg38.chr19_GL949748v2_alt 132342 188 + 1064304 ccgagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccacgttggcctcccaaagtgctgggattacaggcgtgagccaccatgcacagccACTGATGTAC s panTro4.chr19 59066410 188 + 63644993 cctagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccacgttggcctccccaagtgctgggattacaggcgtgagccaccatgcacggccACTGATGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943115 186 + 60714840 cctagtagctgggtttacaggcacacaccactatgcccagctaatttttgta--tttagtagagacggggttttgccgtgtttggccaggctggtcttgaacttctgacctcaggtgatccacccatcttggcctcccaaagtgctgggattacaggcgtgagccaccatgcatggccACTGATGTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708864 188 - 106955855 cctagtagctgggattacaggcacacaccaccatgcacagctaatttttgtatttttagtagagagcgggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccaccttgacctcccaaagtgctgggattacaggcatgagccaccatgcacggccACTGATGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996396 147 + 64156825 cctagtagctgggattacaggcacgcaccaccatgcccggctaatttttatatttttagtacagacggggttttgccatgtttggccaggctggtcttg---------------------------------------aaTGTGCTGGAATTACAGGTGTGAGCCACCATGCATGACCA--GACATAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020996 186 + 59248254 cctagtagctgggattacaggcacgcaccaccatgcccggctaatttttgtatttttagtacagacggggttttgccatgtttggccaggctggtcttgaactcctgacctcaggtgatccatccaccttggcctcccaatgtgctgggattacaggtgtgagccaccatgtacgaccA--GACATAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127259 185 + 51301725 cc-agtagctgggattacaggcacgcaccaccatgcccggttaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaactcctgacctcaggtgatccatccaccttggcctcccaatgtgctgggattacaggtgtgagccaccgtgcacgacCA--GACATAc i papAnu2.chr19 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e calJac3.chr22 45411587 12 + 49145316 I e chlSab2.chr6 46834471 4359 + 50890351 I a score=561883.000000 s hg38.chr19_GL949748v2_alt 132530 265 + 1064304 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCGATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtgcagtggcgcaatctcggcttactgcagcttccacctcctggg-tcaagcgattctcctgcttcagcttcc-------ctgggattacaggcgcgcaccaccatgcccggctaattttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca s panTro4.chr19 59066598 271 + 63644993 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCAATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtgcagtggcacaatctcggcttactgcagcttccacctcctggg-tcaagtgattctcctgcttcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctaa-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943301 272 + 60714840 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCGATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtacagtggcgcagtctcggcttactgcaacttccacctcctggg-tcaagcgattctcctgcttcagcctcctgagtagctgggattacaggcgcacaccaccacgcccggctaa-tttttttgtatttt---tagagataccatgttgaccaaggctggtcttgaactcctgacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709052 275 - 106955855 CTTTTACACTTGATCTTAGCCAAAAAGCAGGAG------GCGATTGATTCACt------------ttttgtttgtttgtttgttttgagatggggtctcgctc-tgtcatccaggctggagtgcagtggcgcaatctcggctcactgcaacttccacctcccagg-tcaagtgattctcctgcttcagcctcccaagtagctgggattacaggcacgcaccaccatgcccagctaa-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996543 279 + 64156825 TTTTTACACTTGATCTTAGCCAAAAGGCAAGAG------GCGAATGATTCGCC--ttttttttttt----ttctctttttttttttgagatggggtctcgctc-tgtcacctgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccagg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggctta-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021182 282 + 59248254 TTTTTACACTTGATCTTAGCCAAAAGGCAAGAG------GCGAATGATTCGCCttttttttttttt----ttttctttttttttttgagatggggtctcgctc-tgtcacccgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccagg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggcttattttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127444 278 + 51301725 tttttacacttgatcttagccaaaaggcaaGAGCAAAAAGCGAatgatttgcc---------tttt----ttttttttttttttttgagatggggtctcgctc-tgtcacccgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccggg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggctta-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45411599 268 + 49145316 CTTTTACACTCGATCTTAGCCAAAAGGCAAGAA------GTGAT--GTTCACt----------ttt----tttttttttttttcctgagattgagtctcactcttgccacccaggctagagtgctgtggcacgatctcagctcactgcagcttccacctcctgggttcaagcgattctcctgcctcagcctct---------gggactaaaggtgcatgccaccatgctcagctaactttttttgtatttttagtagagataccatgttgacc-aggctggtcttgaactcctgaccgcg i calJac3.chr22 I 12 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e chlSab2.chr6 46834471 4359 + 50890351 I a score=222547.000000 s hg38.chr19_GL949748v2_alt 132795 74 + 1064304 ggtgatccacccgcctcagcctcccaaggtggtgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT s panTro4.chr19 59066869 74 + 63644993 ggtgatccacccgcctcagcctcccaaggtggtgggattccaggcgtgagccacagcC-GGCTGATTTAAATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943573 74 + 60714840 ggtgatccaccggcctcagcctcccaaggtgctgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709327 74 - 106955855 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT i nomLeu3.chr10 C 0 I 270 s rheMac3.chr19 59996822 74 + 64156825 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021464 74 + 59248254 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127722 74 + 51301725 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccatagct-ggctgatttacatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838830 74 + 50890351 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i chlSab2.chr6 I 4359 C 0 s calJac3.chr22 45411867 75 + 49145316 ggtgatctgcccacctcagtttcccaaaatgctgggattacaggcatgagccaccacCAAGCTGATTTAGATTTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I a score=218485.000000 s hg38.chr19_GL949748v2_alt 132869 73 + 1064304 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA s panTro4.chr19 59066943 73 + 63644993 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943647 73 + 60714840 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709671 73 - 106955855 taaaaGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCTGTTTGCCCAGCAGCTGGGGACCTCTA i nomLeu3.chr10 I 270 C 0 s rheMac3.chr19 59996896 74 + 64156825 TAAAAGCCTATCAAGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021538 74 + 59248254 TAAAAGCCTATCAAGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127796 73 + 51301725 taaaagcccatC-AGGTTTCAGACCCCTCCAGTTTCGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838904 73 + 50890351 TAAAAGCCCATC-AGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411942 73 + 49145316 TAAAAGCTCATC-AGGTTTGAGACCCCTCCAGTTTGGAGACCTGAGCAGTTCACCTAGCAGCTGGGGATCTCGA i calJac3.chr22 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I a score=99369.000000 s hg38.chr19_GL949748v2_alt 132942 31 + 1064304 GCATCTACCTCCAAC-CCCTGTGGGCGCCCAG s panTro4.chr19 59067016 31 + 63644993 GCATCTACCTCCAAC-CCCTGTGGGCGCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943720 31 + 60714840 GCATCTACCTCCAAG-CCCTGTGGGCGCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709744 31 - 106955855 GCATCTACCTCCAAG-CCCTGTGGGCGCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996970 31 + 64156825 GCATCTACCTCCAAG-CCCTGTGGGTGCCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021612 31 + 59248254 GCATCTACCTTCAAG-CCCTGTGGGTGCCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127869 31 + 51301725 GCATCTACCTCCAAG-CCCCGTGGGTGCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838977 31 + 50890351 GCATCTACCTCCAAG-CCCTGTGGGTGCCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45412015 31 + 49145316 GCATCTACCTCCAAG-CCCTGAGGGCACCCAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19622962 29 - 122678785 GCACCCACTTCCAAGCCCCTGCAGGGAGG--- i canFam3.chr1 I 90 C 0 e mm10.chr7 3663295 254 + 145441459 I a score=8422861.000000 s hg38.chr19_GL949748v2_alt 132973 2501 + 1064304 ACGGCAATAGCCAACGCTTTTTGAGTGTCATGCCTTGGTATGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCAATGGCTAAAGTGCCCCCTCCCTCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACCTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATG-AGAAAGGGAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAACCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTGACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCTGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCTAGACTACCTCC---------------------------CACCCACGGCGG---AGGATCAGACTAGCTAAGGAAATGAAAGTTGGGTGTACACCAAACAGATTTAAAGAGCCATACGGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-CGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCGCCTCTCCTTAAAATGTGCcttcccctcactgaagccatctcacttcgtgcaacagagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtcaggtgcacggcatgtagttagcatac----agtagatgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggaaaAACTAAGACGAGGGCGAGATCAAGGAAGGTTTCGTGGAAGTGGGCACAAGGTTTGCGGGGCAACGTCCTCGAAAGTGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACATTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGCGCTGGGCCC-CGGAGCGCCGCCCTGCCGGCTTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTTTTCTTGTCCCTACTTCGACCGCGGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAGCGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGACAAGTCTCCTTGCGGAAGAGCGCTCTGCACCGACAAACATGCCCGTACATTTGATTGGCTCCTGCCCCGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGGAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGCGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTGTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGAAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAACGTCTGGctccttcgaagccagg s panTro4.chr19 59067047 2493 + 63644993 ACGGCAATAGCCAACGCTTTTTGAGTGTCATGCCTTGGTATGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCAATGGCTAAAGTGCCCCCTCCCTCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-TGAAAGGGAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAACCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATCA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCTGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCTAGACTACCTCC---------------------------CACCCACGGTGG---AGGATCAGACTAGCTAAGGAAATGAAAGTTGGGTGTACACCAAACAGATTTAAAGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGCGCA-CGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCGCCTCTCCTTAAAATGTGTcttcccctcactgaagccatctcacttcgtgcaacagagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtcaggtgcacggcatgtagttagcatac----agtagatgctcaataaatagGATGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggaaaAACTAAGACGAGGGCGAGATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCGGGGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACATTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAAccgcggcgcctgcgcgctgggccc-cggagcgccgcccggccggcTTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGCTG-CCCCCCTTCTTCTTGTCCCTACTTCGACCGCGGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAGCGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTG--------CTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGACAAGTCTCCTTGCGGAAGAGCGCTCTGCATCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATATATGGAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagatagcaaagctggaagggcttggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGACCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGAAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAACGTCTGGctccttcgaagccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943751 2491 + 60714840 ATGGCAATAGCCAACGCTTTTTGAGTGTCATGCTTTGGTATGGCCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCGCAACCAATGGCTAAAGTGCCCCCTCCCCCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCTTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCGACAGGGCCAGAACCTGGGGCTCCTGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATCGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGTAGTC------------------------------CAGGat--gctggggttata-agaaagggagcactaggcgcctaaaagaggcacctgtcct---agctgggggtgagggtagg---------------cagatgaggcaacgc------ctgggttTCGTAAGCTCC--CTTTCAAATAGTAAACCACGGGACATCAAGGATGTATGGGAGGAGGTCCCAGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGCCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGCTTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACAGTGG---AGGATCAGACTAGCTAAGGAAGTGAAAGTTGGGTGTACACCAAAC--ATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCCCGATGGCGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCcttcccctcactgaagccatctcacttcgtgcaacggagatgacagtgtccctctaa----gaacagtgcttattggggattccgcaagtcaggtgctctgcatgtagttagcatac----agtaggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAATGATCCGAATTTCCGTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttctagccacgtgaaatacatcagtgggggaacaactaagacgaGGGCGAAATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGCGCTGGGCCC-CGGAGCTCCGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCGCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACACGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATGCCCCCCCTTCGTCTTGTTCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAGTGCTAGGCGTTTGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGTCAAGCCTCCTTGCGGAAGAGCGCTCTGCACCGACAAACATGCCCGTACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGGAAGATCACC-CGAGAGTCAAGGACGT-GGCG-----GCGAGGGGCCCTGGAAATCTCCAGATACCAAAGCTGGAAGGGCGTGGAGTCTTCTCTAGTTCTCCTAG-TTTACAGATGTTGTG----------ACAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATTAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAATATCTGGctccttcgaagccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709775 2499 - 106955855 ATGGCAATAGCCAACGCTTTTTGAGTGTCATGCTTTGATAAGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCGATGGCTAAAGTGCGCCCTCCCCCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCTTGTCGCTTTTCTTCCTCGTACTCTTTATTGCTTCTGATCACTCCTTTCCCTTCCTCCAGGAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGCTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGTAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGAAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGATGATGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAGCCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGAGGTTCCTAACCTCAAATGAGGCAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACGGTGG---AGGATCAGACTAGCGAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTATGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCTTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCActtaagctatctcacttcgtgcaacggagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtccagtgctctgcatttagttagcatac----agtaggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGTTCACGGATTCATTAAATG---TTAAGCTTCTCTTTTGTGCTAGACACTCTTCCAGCCATGTGAAATACATCAGTGGGGGAAAAACTAAGACGAGGGCGAGATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCAGAGCAACGTTCTCGAAAACGGG-------------ATCGGCGCCTGGTCCGGAATTTCACACGGGACACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGTGCTGGGCCC-CGGAGCTCCGCCCGGCTGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGTACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGGCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCTTCTTGTTCCTACTTCGACCGCAGATTGGTTCCGAATTAATTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACACCCTTCATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCCGAACCAATCATAAGTTGGCCCGCCCCT-GATGGTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGTCAAGTCTCCTTGCGGAAGAGCGCTCCGCACTGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTTAGGGACGC-CGCGTCCCTGCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCGGTGGGCCTGGGGTCTG---ATAGTGGGACGT-----------GGGCTGCGGGGGTCACAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGTGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAGCCCTCTTCCC-CAAC------CCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAAGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCACACGTCTGGctccttcgaagccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59997001 2477 + 64156825 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------G-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGAAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCAGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTAAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCACTGAAGCCATCTCACTCCGTGCAACGGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTCCTGgggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatAAACTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagctgctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCCTCTTGTCCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCACAGCGAATGTTAGGCGTTCGACTCGTGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCGCCCC--GATGCTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGGCGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTCGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGGCAGCCCTCTTCCC-CAGCCCCTCTCCGTGTTCCCCG--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCCCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAACCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021643 2477 + 59248254 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------G-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGAAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCAGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTTCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGGCTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCACTGAAGCCATCTCACTCCGTGCAACGGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTCCTGgggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatAAACTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagctgctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCCTCTTGTCCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCACAGCGAATGTTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCGCCCC--GATGCTACCATATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGGCGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTCGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTCTCCGTGTTCCCCG--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCCCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127900 2452 + 51301725 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCC--------------------GCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGAtcactcctttcccttcctccagcAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------A-ATTCA--AAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGggttcctaacctcaagtgagaCAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC-----------------------------TCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA-----------------------GAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCccgtgtttgtgtgtatgt--------------------------------------------------------gtctagggGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGCC-TGTCCCCCTCTCCTT-AAATGTGCCTTTCCCTCACTGAAGCCAT----CTCCGTGCAACAGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTATTGGGGATTCCGCAAGTCAGGCGCTCTGCATGCAGTTAGCatac----aataggtgctcaataaataggcTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCTCATgtattcattaaatgtttttaa---gcttttttgtGCTAGACAGTGTTCCAGCCATGTGAAATACATCAGTGGGGGGA-GACTAAGACGAAGGCGAGATCAAGGGAGGTTTGGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGTCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCTCTCCGCTCacgctccttctcctcctcccggGCCTGGGCCTCGTCACGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTTTTCTTGTCCCTACTTCGACCACAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCATAGCGAATGTTAGGCGTTCGGCTCATGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCACCCCT-GATGGTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGGGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCggtagccctgcccccaccttcaGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCC-----GCGAGGGGCCTTGGAAATCTCCAGATACCAAAGCTGGAAGGGCGTGGAGTCTTCTCCAGTTCTCCTAG-TTTACAGATGTTGTGACCTAGGCTTACAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GAGCCGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTTTCCGTGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCTGACGTTTGAGCTCAGAGATGAGGCGTCCGTAGGAATTAGCCCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGAAAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46839008 2477 + 50890351 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCATTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCGGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTCATAGGCAGGGCATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CCGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAGACAGATTTAAGGAGCCATACAGAAAGCCCGCGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCcttcccctcactgaagccatctcacttcgtgcaacggcgatgacagtgcccctctaagaaggaacagtgcctattggggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAAACGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCCGCCCGGCTGGCCTCTGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCGCTTTGCACTTCCGATTGGCGAGGGGATG-CCCCCC-TCCTGTTGTCCCTACTTCGAccacagattggttccgaattagttggtacggccc--cctggcctgtaacgacaggtgattggctgagacgtccttt-tcacagcGAATGTTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTATTACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACACAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTATG---AAAGTGGGACGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTTTCCGTGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45412046 2430 + 49145316 ATGGCAACAGCCACCACTTC-TGAGTG---TGCTTTGGTATGGTTCTAAA---TTCTGAGTGTTCACTCTTGTTTAGCCTTAGTCACAACCAATGGCTAAAGTGTCC-CTCCCCCCA------GCTCCATTCATG---TCT--CTGATGAA-------GTAGATAAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTGCTCTTTATTGCCTCTGATCAGGCCTTTCCCCTCCTCCAGCAGCTCTCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCACCTCTGCTGCCTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTACAGGCAAGACATTAAAAACCTAAAGGT------A-ATTCAAGAACTTTT-----------AAGTCTGGTG------CGCACCACAGGAAACAGCAGTC------------------------------CAGGGT--GCTGGGTTTGTA-AGAAAGGG--------------------GGCACCTGTCCT---AGC-AGGGGTGAGGGTAGG---------------CAGATAAGGCAACAC------CTGGGTTTTGTAAACTGC--CTTTCAAATAGTAAACCACA---CATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCTATA---------------------------------------------------------------------AAGGTAGAACAA--ACTGCATTA-GGTCAGATGATCTGGATTCCAGGCATGGCTCCAAGTCATTACCCCAAGT--------------------------------------------CCATTGATGAAGCCCT-----------------------GTCTCCCACC----------------------------TTCAGGAC---------------------------------------------------AAAGCTCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CTCCCAGTGTGG---AGGATCAGACTGGCTAAGGAACTGAAAGTTAGGTGTACACCAAACAGATTTAAGGAGCTATACATAAAGCCCATGTTTGTGTGTGTGT--------------------------------------------------------CT---GGGGGT-------------------------------------------------------------------------------GGTGCAGGGAAAGGGCTCGCC------CAAGGGGGTGGAGact---------tcccctccct--------------------tgacgccatctcacttcgtgccacggagatgacaatgcctctttaagaaagaacggtgcttaagggggattctggaagtcaggcgttctgcatgcagttagcatac----agtaactgctcaataaatagACTGTGCAAGCCAACTAGAAAGTGATCCGAATTTCCTCAAACTGTCCAAGGAATCCTGAATTCGGTAAACA--TTTATGCTTCTCTTTTGTGCTAGACACTGCTCTAGCCATGTGAAATACATCAGTGGGGGGA-AAC-AAGACGAGGGGGCGATCAAGGGAGATTTCATGCAAGTGGGCACAACGTTTGCCGAGCAACGTT-TCGGAAAAGAG-------------GTCCGCGCCGGGTCACGAATTACATACGGGGCACACGGCGCCTGCGCAACGCGTCCACTTCCGGCCCCCTACCATGGCGCCTGCGCGCTGGGCCC-CGGAGTTCCGCCCGGCCGGTTCCCAGGCTTACCTCCTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCTTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCAGTCCACGGACTGGCACGCCCGCCTCTCTGCACTTCCGATTGGCGAGAGAATG--CCCCCTCCCTCTTGTCCCTACTTCGACCACAGATTGGTTCTTAACTCATTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTAAGACGCCCTTTATCTCAGCGAATGCCAGGCTTTTGGCGCGTGGTATCCCCTAGCAACCG---CTTTTCACATATCCGAGCCAATCGCAAGTTGGCCCTCCCCT-AATG---CCAGATTCGGCCGCCTATTG-------------GCCAACACAACCATCAAGTCTCCTTGCGGAAGAGCACTTCGAACGGCCACACATTCCCATGCATTTGATTGGCTCCCGCCCTGATGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGTCACCTCGGCTG-TGTTTATTCATAGAAGAAAGATCACC-CGAGAGTCTGGGACGT-GGCG-----GCGAGGGTCTCTGGAAATCTCCAGATCCTAGAGCTGGAAGAGCGTGGGGTCTTCTCTAGTTCTCCTAGTTTTACAGA---TGTGACCTAGGCTTACAATTGGCCTGGAGTCTG---AAGGTGGGACAT-----------GGGCTGCAGGGGTCAAAAAGCCGGGTGGGTGGAGCTCAGCGCCACAGCGCGCCGTGCGAGGAAGACTTTGTTCTGCGCCTCCTG------------AGGCAAAGAGAGGTGGAGGTCAGACAGCCCTCTCCCC-CAATGCCTTTCAATGTCCCCCACGGGGTCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctgagagatgagacgaccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACACGAACAGAAGCCACTCCTGACACGCTCCTCCATTCTATACAAACGCCTGGCTCCTTCAAAGCCAG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3663549 2703 + 145441459 ACAGCAGTAACCAAC---TTACAGGTAATATCTCTCAGTCATATTCTAAAAATTTTAGAGTGCTTATCACCATATCCTAACAGTCACAGCCAGT-----------CCCCACCCCC-----------------ATGATTCCA--CCAAAAAA------------TGAGGC---CAACTTACCTTTTCCCGTCGCTTCTCTTCCTCATGCTCTTTATTGCCTCTGGGAACTCCTTTCCTTTCTTCCAGCAGCTCCCTAAACAGGTCCACAGGGCCAGAACTTGGAGCTCCTGGGTCTGCTGCTTCCAGCTCAGGCACTGAGTTTCGTTGCCTGGCTTTCTTCCGTAGGAATTCCGTACGGGCCTATGA---AG--GGTTATAGGGAAGACATTCAGAACCCAGAAGTGCTGAGG-ATACAAGAAT-GGTCCATGGGCAGGGAgggcagtggtagcacacacctttgaacctagcattcaggagacagaggcacatggatctctgaattcaaggccagcatggtctacagagtgagttagttccaggactacacagaaaaatcctgtcttgaaaagaGGGGGTGGGGGTGGGGCAAATATTGAGAGCAAGAAGAGATACCATTTCTAACTTGGAGTGGAGAATCGATGTTTTTAGACAGTAAAC--TGGGCTATCAGAGATAGTTCAGAGAAGATCCCTGACCTAAAACAGAAGGCTTCCCAGTCTCAAGTGATGCAAGGAAAACCCACTCAGGTATAGGTATAGGTGGCTTGTTCAGCCATAGAGCCCCTGCCTTGTGTGTAGTTCCAAATTCAGTCCCCAACACAAGTATGTATATACTCCCAAACTTGTAAGGTAATCAAA-TATTGCTTTCTGGACAAAGGATCTAAATCCAAGGTATGGCTCCAGGTCACCACTCCAAGTACAACCTGACCCCAGATAGGGATGGTCTCTGATTCACAATTCTCCCCTTTCTGCAGCCTTAGTATCTGGGATTAATTACAAGCGTCACCTttttgtttgtttgttttgttttgttttgttttttaagacagggtttttctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcagaaatccacctgcctctgcctcccaggtgctgggat--caaaggcgtgcgccaccgccactacccggctTTTTTTTTTTTTTTTAAGCCCACACTAATTCATGATCAGATTGGCCAAGGGACTTAA------GTGTAAACCAAACTAATCGAGTA------ACTTAGAGTCTgtg---atgtgtgtgtggtcttcaatactagcgttcaagtggaacaggcaagctgagttcaagaccagcctggtctacgtagccagttccataacagccacggctacacagaccctgttccaaataaaacCTCCAGATGCTCTTTTCTTGGCAAGCAATGAGGGAGGG-AGAAAAGACATGCC------CAACGAAGTGGACCCCGGCTTGTCCGCCCTTTGCC------------CTCCTTGCTGAAGCCGTTGTACTCAGAGCAA----GGTGACCGCACCCCTCCAAG------TTGTTCTAAGAGGGAATTTCTCAAAGCAAGCGCTCAGAAGGAAGGGAGCATACACAGAGTGGGTGATCAGTAATTAACTTGTGCGGGCAACCTATAAAGTAATCAGAAT-------ATTTGTCCAA------------------------------CTCTTCCAGTATGCTAGTCTCTGGTCCCTCA---------ACACCAGTGGGGAAA--------------------TCTAGGAAGGTTTCTTGGAAGTTAGCACAGGATTTTCAGAGAAACATCGTCGAA--------------------------------------------------CACACAGA--------------CCCGCTCCCGGCAC----------CGAGTGATAGCTAGGCCCGCCGCGCT---TCTGGGCGGTCCCCAGGCTTACCTCTTGCTGGGCGAGCAGCACCCTCCGCTCCCGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCGCGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTCGGCAAGATATTCATGGCTCCAGTGCCGACCTCGGACTGTCAGGCCCACTCTTCAGCACTTCCGATTGGCTCGAGGATG--CTCCCGCCCCATGGTTCCACCCTTGCTCGTGCATTGGTTCTGGGCCAATTGTCACGTCCCATCCTAGCCT-TGTTTAGAGATTATTGGCTGAGA-GCCTTCCATCTCAGCCAATCCTAAGCATTT------------------GTAACC----------------------------TGAGTTGCTCCACCCCCGGACGCTGCTTGATGAGGCTGTTGCCTGTCTATTCCTTTAAGCAGACATAACC--TAGCTCTTC-------AGGCCGATTTGGACC------------------------TGGCCCCTCCCCA-----AACCCCGTCCGAGGCTTCAGAACG-GGGTTTCAA--AACGCA--AAGCGGCCTTGACTGTTGTTTATTAATAC-----GGTTCAAT-TGAGAGTGTAGCATTCGGGTG-----GCAGAGGGC--GGGGAATTT---GGTTCCAGAGATGAAAGAG------------------TCCCATCA-CTTG-ATATGAAGTCACTGAAGCTGA-----------GGGGCTG---AAGGT------T-----------CAGCCAGACTTATCAGGAAGTTCCATTCCTTGAGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTGCACTTCCTG-----------CGGGCAAAAAGGAGCGAAAGTGAAGCACACCTTTT----CATTCTTCTTTCATAGTCTCAT--AGAGCCCTTT--CCGGGGAAATCAGCCTGG-CTCACCGTCTCTATCTGGCGTTTGAGCTCAGAGATGAGGCGTCCGTAACAGTTAGCCAGGGCTACGGTATACATCATCAGGATGCTATGGAAGACAGGAATGAAAATCACTCTAGAAAAACA-----ATCATCTTCAT-CATATGGCTCCTTAGAAACCAgg i mm10.chr7 I 254 I 288 s canFam3.chr1 19622991 2203 - 122678785 GTGCCAATAACCCACACTG--GGAGTGCTGTGTTCCAGTA-----CTGAG---TTCTCTGTGTCAG--CTCATTTCATCCCCACCCTAC---------------CTCTCTGTTCCCATCAGTCACCCCAGACTTTACCCCTGACTGACAGGGACGGGTGTGGGGGGGGCGCGCAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCATACTCTCTATTGCCTCTGGTCGCCCCTTTCCCTTCCTCCAGCAGCTCCCGAAATAGGTCCACAGGGCCAGAACTGGGGGCTCCCGCCTCTGCTGCTTGGAGCTCAGGTAGCGAGTGCTGGTGCCTGGCTTTCTTCCGTAGGAATTCTGTGCGGGCCTGGGGGAAAGAAAGTTACAGGCAGAGCATTCATTGCCTAGCCAT------GCCTCCAAGAAC-TGT-----------GAGACCGGTG------CCAAGCACAGAGAAT-------------------------------------CCCCGT--GCTGGTGCTGAG----------------GGCTCATCAGAGCATCACCCAGCCT-------GGGGGAGAGGATGGG---------------AGAATGAGGTGACAC------CTGGGTTT-GTACGCTGC--CTTT-----GGTGAACCA-------------------------------------------GAAGGGTTTCCCAACCTCAGCTGGCACAATAAAAA-------------------------------CAGCTAGG---------------------------------------------------------------------AAGGCAGCCCAAAATTTGC-----GAGCAGGCGACCAGAAATACAG-TAAGGCTCCAGATCACTGTCCC---T--------------------------------------------CGACCAC----GTGCA-----------------------ATCTGCTGAC------------------------------------------------------------------------------------CAAA--------------------------------------GTGAGCTT-TAAAAGCCCAGACCACCTCC---------------------------CGGCCAGCGGTG---AGGGCCAGATTCGTTAACAAACTTCAAACTCCGTGCACACTAGA-AGCT---AGAAGTTACTCCGAGAACCCCCG---------------------------------------------------------------------GGGTTGGGGGC-------------------------------------------------------------------------------CGCG-G-GGAGAGGGCTGGCC------CCACAGGGGGA----TGGG-TACGTCCCACTTCTC------------------------------------TGCACAGCGGAG--GGCAGTG-CCCTCTGGGCACGAACAGAGC----------------AGGTCCAGCGCTCTGCTCGGGGCGAGCATAC----AGCAGACGCTC--CAGAGGGGTCGGGCAGGAACACTAAACGTGGGTCTGCGTTTCTTTGAACTGCAC-AGGATTCATTTTTTCAGCA-----------GCCCCTACTCTAAGCCAGGCAC-ACCCCGGCCTCACGCAAAACG--AGTGGCGGAA--ACCAGGGCAAAGGGGAGGCCCAGGTGGG----------GAAGCCTCA----------GGTAGGGCCCGCGCAGGCGAGCCCCTGCGTTTCCAACCGCGCCCAGCTCCTCCAGCCTCACGGGAGGCACTGCGCGTGTGCGCCATC-CCGCTTCCGGCCCCTCCCCCACGCGCCTGCGCGCTCGGCCC-GGGAGTCGCGTCCGACCGCACTCGGGGCTTACCTCCTGCTGAGCGAGCAGCACCCTCCGCTCACGTTCTTTCTCCTCCTCTCGGGCCTGAGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAACTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCCGTCCACCGACTG-CAGGCCCACCTCTGAGCACTTTCTATTGGCGAGAGGATG---CCGTTCCCTGTTGTTCCTGCCTCAGCTACGGATTGGCCCTGGGCTGGCTGCCACGCCCC-TCCAAGTCCGTAGCGAGCGCTGATTGGCTGAGATGCC---------------------GAATTCGGGT--TGGTGTAGCCTGGAGACCGCCTCTTCACCAGGTCCTGAGCCAATCAC---TTGTCCCCGCCCT-GAAGCTACGGGACGCGGCCGCTGATTG-------------GCTGGC-------------CTTCTCGAGG--------------CCGATA-------------ATCTGATTGGCC-------------GGC-------------TCAGGATGCAAGTTACAAACAAAGCGCTCTGCAGTCTCAGCGG-CGTTTATTGGTACGAGAAAGGTTAACGCGAGAGTGAGGG-----GGTG-----TC--AGGGCCCCGGAAATCT-------CCGCAGCCGG--GGACTTAGGGTCTTCTCAAGTTCTCT----TTTACAGATGAGGTG---CGGGCTTCCATAGGGTCCGGGGGCAGGATGAAGTGGGCCATGGTCCCGAGCAGGGCTAGGGAGGTCGAAGAGCCCCGGTGGCCGAGCTCAGTGCCACAGCGCGCTGTGCCAGGAAGACCTTATTCTGCGCCTCCTGGGTAGAGGTAAAGGGTAAAGAGAAGTGCAGGTGAGGCCGACCGCTCCCCACCATTTCTTTCAACATCC------AGGACCCCCTACCATGA---ACCCGCTTTGCCTCACCGTCTCTATCTGGCGTTTGAGCTCAGAGACCAGACGTCCATAGGAGTTAGCCAAGGCCAGGGTATATGCCATCAGGATGCTATAGG-GACGGAAATGGAAGCCATACCCAGGGGGCTCTTAGCATATCTTCAGTGTAAAGGCTCCTTAGAAACCGGG i canFam3.chr1 C 0 C 0 a score=84819.000000 s hg38.chr19_GL949748v2_alt 135474 36 + 1064304 gatgtggacgcctaagcccctcctcgtctgggctca s panTro4.chr19 59069540 36 + 63644993 gatgtggacgcctaagcccctcctcgtctgggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946242 36 + 60714840 gatgtggacccctaagcccctcctcgtctgggctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712274 36 - 106955855 gatgtggacccctaagcccctcctcgtctaggctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59999478 36 + 64156825 GATGTGgacccctaagtccctcctcgtccaggctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55024120 36 + 59248254 GATGTGgacccctaagtccctcctcgtccaggctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47130352 36 + 51301725 GATATGGACCCCCAAGCCCCTCCTCGTCCAGGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46841485 36 + 50890351 GATGTGgacccctaagcccctcctcgtccaggctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45414476 13 + 49145316 GATG-------------------TCATCTA----CA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19625194 28 - 122678785 GATCTGGACTCCC-AGCCCCACCCCACCC------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3666252 288 + 145441459 I a score=2513756.000000 s hg38.chr19_GL949748v2_alt 135510 672 + 1064304 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctacgtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCGTCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAATTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACAAAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGTGCCAGGAGTCTGAACACTGAATGgggagagagggaggga-------------gag-aggcgggagCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGCGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAAGGGCTCTGAAACA-CAAGAGTCTGTGCCT---CCAttttttttttttttt s panTro4.chr19 59069576 672 + 63644993 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctacgccccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGTGCCAGGAGTCTGAACACTGAATGGGGAGAGAGGGAGGGA-------------GAG-AGGCGGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGCGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAAGGGATCTGAAACA-CAAGAGTCTGTGCCT---CCtttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946278 673 + 60714840 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGCCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGGCTGTCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGAGCCAGGAGTCTGAACACTGAATGCGGGGAGAGGGACGGA-------------GAG-AGGCGGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAGGGGATCTGAAACACCAAGAGTCTGTGCCT---CCtttttttttttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712310 668 - 106955855 aggagttcagtctcc-cagcccctccgcct---tcagatccagcagtcataagtcccgcgcacctcctccttcggacccagcagtcc--aggagcctag--gcctcctctctcagactcagTATGTT-------------GCCTGCTC--------------------CCACGCCCAAGCCTCT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAAAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTAGGCTCACGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGGGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACACTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAGGGGATCTGAAAAA-CAAGAGTCTGTGCC-------ttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59999514 667 + 64156825 aggagttcagtctcc-cagcacctccgcgt---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacatt-------------gcctgctc--------------------ccacccccaagccttt-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCACATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGTTCAAGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAGTCTGTGCC-------TTTTTTTTTTTTT-- i rheMac3.chr19 C 0 M 1177 s macFas5.chr19 55024156 663 + 59248254 aggagttcagtctcc-cagcacctccgcgt---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGTTCAAGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAATCTGTGCC-------tcttttttt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47130388 666 + 51301725 AGGAGTTCAGTCTCC-CAGCACCTCCGCCT---TCAGATCCAGGAGTCC-AAGTCCCGCCCACCTCCTCCTTCGGACCCAGCAGTCC--AGGAGCCTag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTccccaggaagaagaggaagttCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCAAGTAGAGCCAGGAGTCTGAACACTGAatggggggagagggaggga-------------gag-aggcaggaacCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACG-CAAGAGTCtgtgcc-------ttttttgtttgtt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46841521 665 + 50890351 aggagttcagtctcc-cagcacctccgcct---tcagatccaggagtcctaaatcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTTGAGATCAGCAGAAGGGGCGCAGCAAACGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCGGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACGTAGAGCCAGGAGTC--AACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAGTCTGTGCC-------tttcttttttttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45414489 611 + 49145316 AGGACTTCAGTCTCC-CAGC-------------------CCAGGAGTCCTAAGTCCCACCCTCCTCCTCCTCC-----------TCCTTTGGACCCTAG--GCCTCCTCCCAC------------------------------------------------------------CCCGAGCCTCT-----------------------CCTCTCTCCGACGCAGGTG----GT---GGCCC----------------CCAGATCACGTGCATTCAAACCCAGACCCAGAAGTCTGGGCAAACTCACCTGGAAATCAGCAGAAGGGGTACAGCAAAAGCCTGAGTCCCCAGGAAGAAGAGGAAGTTCTGGGCGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACATAGCTTAGAAGGTGGGATCCTG-AAGTCAAGATAGGCTGGGCTCACGTAGAGCCAGGAGTCTGAACGCTGAACGCAGGGAGAGGGAGGGA-------------AAG-AGGCAGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGAGGAACGCTGGAGATGGCCAGACCCAGGAGGAGGACCAGGGGGAAAAAGAAATTCGCTGTGGAGGCCCGGAACGTGCGGGCGGCCGGAGAGCAGGTGAAGAAGAGGGTGAGCTGGCAGGGG-AAGGCACAGAGGAAGGGGATCTGAAA---CAACGGTCTGTGCC-------TCCTGCtttttt--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3666540 708 + 145441459 AGAGGTTCAGGCTCCATACCTCCTCCCCCTTCATCAAATCGATAAATCCACACCCTAGCCCTCCT--TTCCTCAGA-CCAGGAATCC--A--AACCCAG--ATGTCTTTTCTTAGACCCTAAGCATTCACACTCCGACTCTCCTGCTCTTGATTTATAGGCATCCCGGCCAGCCCCACGTCTCTGTTGTATATAGGCACCCAGCCCACCTCTCTAGCACTCAGGTGCCCAGA---AACTCCTTTCTCTTTCAAACACTAAATTACACACATTCAAAGTCTGACT---------------GCTCACCTAGAGAGGATCAGAAGAGGTACAGTAAAAGCTTGGGTTCCCAGAAAGTAGAGAAAATTCTGGGCAGTCTGAGGGAGGCTCTCAATGGCCTCAGGGATCTGGGCCCAAATGGACAGCTTCCCGCGGAACGGGCCACACAGTTTCGAAGGTGGGATCCTGTAGGGGGAGACACACTGGATTCA------GTCA--AGTC-----------------GAGCTAGAGTGA-------------GAACAAACAGAAGTCTCTCGTACTTACAGGAAGATACTGTAAAGCACGGGAACTGCAGAGATCGCCAGACCCACAAGGAGAACCAGGGGGAAAAAGAAGTTTGCCGTGGATGCTCGGAAGGTGCGGGAAGCCGGTGAGTAGATGGAGAAGAGGGTTATCTGGTAGGGA-GAGGCGAGGA-AATGGAGGTGTAAGACT-CAAGAGTCAATCCTTT-GCTTTTCCCTGTTTCTT-- i mm10.chr7 I 288 I 1 s canFam3.chr1 19625222 638 - 122678785 ----------CCGCC-AGACCCCTCCTCCC---TCAGACCCGGGAGTCC-AGGCTCCTCCAACCT-------CAGACCCAAGAGTCC--AGGCCCCCAGCCCCCTCCCTCCTCAGACCCAGGA-----------------G-----TC--------------------CTGGCCCCCAACCCCT-----------------------CCTTTCTTAGAAACAGGCA----GTAGGGGCCC----------------CCAGGGAACA------CAAACTCAGACCCAGGATTCTGGGCTCCCTCACCTGGAGATTAAGAGAAGAGGCACAGCAAAAGCCTGGGTCCCCAGGAAAAAGAGAAAGTTCTGGACGGTCTGAGGGAGGTTGGAAATAGACTCAGGGATCTGGGCCCAGATAGACGACTGCCCTTGGAATGGACCACACAGCTTAGAAGGTGGGATCCTG-AAGAAGTCAGAGACAGTGTTCAAGGATGGCCAAGATTCAGAATCCTGGATGAGGGTGGAAGGAAGGAGGGAAGGAGAAGGGAG-AGGCAGGCCCCTGCCACACTTACAGGAAGATGCTGTAAAGCACGGGAACAGCGGAGATGGCCAGAGCCAGGAGAAGGACCAAGGGGAAAAAGAAGTTCGCTGTGGAAGCCCGAAAGGTGCGGGAGGCCGGGGAGCAGGTGGAGAAAAGGGTGAACTGGGGGGAG-AAGG-------------------AGACA-CAAGACCCTGAGCCCTGGCCTGTCCTTTTTCAT--- i canFam3.chr1 C 0 C 0 a score=-567.000000 s hg38.chr19_GL949748v2_alt 136182 9 + 1064304 tttttgaga s panTro4.chr19 59070248 5 + 63644993 ttttt---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946951 5 + 60714840 ttttt---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712978 5 - 106955855 ttttt---- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45415100 9 + 49145316 tttttgaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3667249 9 + 145441459 TCTTGGAGC i mm10.chr7 I 1 I 29 s canFam3.chr1 19625860 9 - 122678785 CGTCCAAGA i canFam3.chr1 C 0 I 29 e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M a score=1093.000000 s hg38.chr19_GL949748v2_alt 136191 14 + 1064304 cagagtctcgctct s calJac3.chr22 45415109 14 + 49145316 cggagtttcgctct i calJac3.chr22 C 0 I 627 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e ponAbe2.chr19 55946956 0 + 60714840 C e nomLeu3.chr10 102712983 0 - 106955855 C e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M e panTro4.chr19 59070253 0 + 63644993 C a score=-415.000000 s hg38.chr19_GL949748v2_alt 136205 11 + 1064304 gtcgcccaggc s panTro4.chr19 59070253 2 + 63644993 ---------tt i panTro4.chr19 C 0 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e ponAbe2.chr19 55946956 0 + 60714840 C e calJac3.chr22 45415123 627 + 49145316 I e nomLeu3.chr10 102712983 0 - 106955855 C e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M a score=178978.000000 s hg38.chr19_GL949748v2_alt 136216 94 + 1064304 ttttttttttgagac-agagtctcgctc-tgtcgcccaggctggagtgcagtggc---------tctcactgcagcctcc-cctcccgggttcaagctattctcgt s panTro4.chr19 59070255 95 + 63644993 ttttttttttgagacaagagtctagctc-tgtcgcccaggctggagtgcagtggc---------tctcactgcagcctcc-cctcccgggttcaagctattttcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946956 86 + 60714840 --------ttgagac-agagtctcgctc-tgtcgcccaggctggggtgcaatggc---------gctcactgcagcctcc-cctcccgggttcaagctattctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712983 86 - 106955855 --------ctgagac-agagtctcgctc-tgtcgcccagactggagtgcggtggc---------gctcactgcagcctcc-cctctcgggttcaagctattctcgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55024819 87 + 59248254 -----tttttgagac---agtctcgctc-tgtggcccaggcgagagtgcagtggc---------gctcactgcagcctcc-cctcctgggttcaagctattctcgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131054 87 + 51301725 -----tgtttgagac---agtctggctc-tgtcgcccaggcgggagtgcagtggc---------gctcactgcagcctcc-cctcccgggttcaagctattcttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842186 92 + 50890351 ttttttttttgagac---agtctcgctt-tgtcgcccaggcgggagtgcagtggc---------gctcactgcagcctcc-cctcccgggttcaagctattctcgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45415750 103 + 49145316 ttttttttttaaggc---agttttgctcttgttgcccaggctggaatgtaatgccgtgatctcagctcactgcaacctccgcctcccgggttcaagctattctcct i calJac3.chr22 I 627 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e rheMac3.chr19 60000181 1177 + 64156825 M a score=1132733.000000 s hg38.chr19_GL949748v2_alt 136310 402 + 1064304 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatcttggctcacttcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcctgccactaagcccggctaa---ttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatccacccgccttagtctcccgaagtgctgggattacaggcgtgagcc-actgcacccggccTACCTGCCTCTCCTTTTTTCC s panTro4.chr19 59070350 403 + 63644993 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatcttggctcacttcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcctgccactaagcccggctaa--tttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatccacccgccttagtctcccgaagtgctgggattacaggcgtgagcc-actgcacccggccTACCTGCCTCTCCTTTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947042 402 + 60714840 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcctggctaatttGTTTTGCTGttgttgttatttgtttgttttctctttttgagacggagtcttgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcccgccaccaagcccggctaa---ttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggcgatccacccgccttagtctcccaaagtgctgggattacaggcgtgagcc-accgcacccggccTACCTGCCTCTCCTTTTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713069 401 - 106955855 gtctcagcctccc-agtagctggggttacaggtgggcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctctcgagtagctgggattacaggcgcccgccaccaagcccggctaa---tttgttttgtatttttagtagagacggggttttgccatgttggccgggctggtctcaaactcctgacctcaggtaatccacccgcgtcagtctcccgaagtgctgagattacaggcgtgagcc-accgcgcccggccTACCTGCCTCTCCTTTTTAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001375 393 + 64156825 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTCGC---TG-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccggagtgtagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatcaacccgcctgagtctcccaaagtactgggattacaggcgtgagcc-gccgcgcccggccTACCCGCCTCTCCTTTTTCCC i rheMac3.chr19 M 1177 C 0 s macFas5.chr19 55024906 379 + 59248254 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttgtttcg------------------------ctgtttttgagacggagcctcgctctgtcgcccaggccggagtgtagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagtcaggctggtctcaaactcctgacctcaggtgatcaacccgcctgagtctcccaaagtactgggattacaggcgtgagcc-gccgcgcccggccTACCCGCCTCTCCTTTTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131141 396 + 51301725 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttgtttcgctgttg-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccagagtgcagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcttcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctgatctcaaactcctgacctcaggtggtcaacccgcctcagtctcccaaagtactgggattacaggcgtgagcc-accgcgcccggcctacccgCCTCTCCTTTTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842278 393 + 50890351 gtctcagcctcccgagtagctgggattgcaggtgtgcaccaccactcccggctaatttGTTTCAC---TG-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccggagtgcagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatcaacccgcctcagtctcccaaagtactgggattacaggcgtgagcc-accgcacccggccTACCCGCCTCTCCTTTTTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45415853 382 + 49145316 gcctcagcctcccaagtggctgggactgcaaacatgcaccacctcacctggctaattt----------tg------------tgtttt-tgtttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggtatgatctcgggtcaccgcaacctccaccttccagtttcaagcagtt-ccctgcctcagcctccagagtagctgggattacaggcacaggccactacacctggtttttgtttgtttttttagttttagcagggacagggtttcaccattttggccagactggtcttgaactcctgacctcaggtgatgcacccgcctcagcctcccaaagtgcagggattgcaggcatgagttaacctcgcccggccTACCTGCCTCTCCTTTTTCCC i calJac3.chr22 C 0 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I a score=289308.000000 s hg38.chr19_GL949748v2_alt 136712 94 + 1064304 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGCCCTAGACCCCTC---C s panTro4.chr19 59070753 90 + 63644993 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGCCCTAGACTc------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947444 94 + 60714840 GAACCAGGAGTCTGAGCCCCTTGCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGccctagacccctc---c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713470 97 - 106955855 AAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATcctc-agacatgtaagtcagaatgccctagacccctccttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001768 97 + 64156825 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCccagagtctaagtccccggatcctc-agacatagaagtcagaatgccctagactccttcttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025285 97 + 59248254 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCAGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGCCCTAGACTccttcttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131537 97 + 51301725 GAACCAGGAGTCTGAGCCCCTTCCTTATCTAGGACCCCAGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGCCCTAGACTCCTCCTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842671 97 + 50890351 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGccctagactcctccttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416235 97 + 49145316 AAACCAGGAGTCTGAGCCCTTTCCTCATCTAGGACCCCAAATTCGGAATTCCCGGATCCTC-AGACATATAAGTCAGAATGCCTCAGACCCTTCTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19625898 90 - 122678785 GAAACAGAATCCCTGGTTCTTTGCTGCCGTCAGATCTGGGAGGCCGGATCCCCTCTTCCCCTGGACGGAAAAG-----ACGCCCTAATCCCCTCC--- i canFam3.chr1 I 29 C 0 e mm10.chr7 3667258 29 + 145441459 I a score=1600437.000000 s hg38.chr19_GL949748v2_alt 136806 405 + 1064304 TCTCAGATGCAGTAG---TCTGTcctccaaccccctcctc----tctcaggaccgagtaatccaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccaatacctcctgcctcagacccaagggt-cccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCGGGGCCGGGCCGGAGTCAGGGGAGTGGCGGCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC s panTro4.chr19 59070843 404 + 63644993 -ctcagatccagtag---tctgtcctccaaccccctcctc----tctcaggaccgagtaatccaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccaatacctcctgcctcagacccaagggt-cccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAATTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCGGGGCCGGGCCGGAGTCAGGGCAGCGGCGGCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947538 405 + 60714840 tctcagatccagtag---tctgtcctccaaccccctcctc----tctcaggaccgagtaatcgaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccagtacctcctgcctcagacccaagggt-cccccctgctccttaccttcttcagGTAGAAAAGCAGCACGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCAGGGCCGGGCCCGAGTCAGGGGAGCAGCGCCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713567 395 - 106955855 tctcagatccaggag---tctgtcctccaaccccctcctc----tctcaggacctagtaatccagcccccctgga---tattccttacccaggacccaggagtgcgggccccaatacctcccgcctcagacccaagGGT--CCCCCTACCCCTTACCTTCTTCAGGTAAAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTTCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggac------ggggcggggccgggcccgagtcaggggagcggcggcctggAGTTT---------CACCGCCCCGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001865 412 + 64156825 tctcagatccaggag---tctgtcctccaaccccctcctc----tcttaagacctagtaatccaggaccccgtga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtccccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAcggggcgggggcggggccgggcccgAGTCAGGGGCGCGGCTATTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025382 412 + 59248254 tctcagatccaggag---tctgtcctccaaccccctcctc----tcttaagacctagtaatccaggaccccgtga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtccccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggacggggcgggggcggggccgggcccgagtcaggggcgcggCTACTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131634 410 + 51301725 TCTCAGATCCAGGAG---TCTGTCCTCCAACCCCCTCCTC----TCTTAGGACCTAGCAATCCAGGACCCCGTGA---TCTTCCTTGCCCAGGACCCAGGAGTGCGGGCCCCAAtacctcctgcctcagacccaaGAGTcccccccTACCCCTTACCTTCTTCAGGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGgcacctggaactcctgggtccCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGgacggggcgggggcggggccgggcccgAGTCAGGGGCGCGGCTACTTG--GTTTCCCCGCCTCCACCGCCCTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842768 411 + 50890351 tctcagatccaggag---tctgtcctccaa-cccctcctc----tcttaggacctagtaatccaggcctccagga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtcccctcctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCACACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggacggggcgggggcggggccgggcccgagtcaggggcgcggCTACTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416332 407 + 49145316 TCTCACATCGAGGAG---TCTGTCCTAcagccccct--tc----tcttacgacctagcagtccaggcccccaaaa---tcttccttgcccgggacccaggagtccaggccccaatacctcctgcctcagacccaagggt-cccccccatcccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGAGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACAGTCTGCGCGTAGATAAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCAAGCGCCCCAGGACAGAGACCGCAGAGGAGCCTGAAGGATGGGGC-GGGGCGGGG-CGAGCCTAAGTCAGAGACGCCGTGGCCTGGAGCTCCCCCGCCTTTACCGCCCCACCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3667287 401 + 145441459 TCTCTGAGCCAATAGGACTCTGACTTCCAGCTCCCTCCTCCCATCCTCAGGGCATAGTAATCAGGGCCCTGATAACCGTCCTCCTTTCTCTAG-CCCAGGACTACAGCCTCCAACACCTGTCAGCTCAGACCCTAGGCT--ACTCCTCAGACTCACCTTCTTCAGGCAGAACAGTATGAGGAACTTAGCAGTGTTGATCAAAGGCAGTAAAGGGCAGAAGAAGCTTCCCACCCAGACCACGGTCTGCGCATAGATGAGCCCCAGCACCTCATCTGGCACCTGGAACTCCAGGGTTCCCGACAGACGACCCAGTGCCCCAGGACAGAGGCCACAGAGTATCCTGAAGGGC------AGAGTGGGAC--------AGTCATAG--GCTGCCTTTTG--GCTTTCCTAACTCTACCACCCAGCCC i mm10.chr7 I 29 I 1787 s canFam3.chr1 19625988 361 - 122678785 TCCCACATCCAGGAG---TCTGTCCTCCAG-ACCCTTCTC----TCTCAGGAGCTAGTAGCTGGGGACCCTCGCA---TCCTCCTTCCTCAGGACCCAGGAAT-------------------------------------CCACCACACTCCTCACCTTCTTGAAATAGAAAAGTAACAGGAACTTGGCCGTGTTGAGCAGAGGTAGTAGAGGGCAGAAAAAACTCCCTACCCAGACCACCGTCTGTGCGTAGATGAGCCCGAGCACCTCGTCGGGTACCTGGAACTCCTGGGTTCCTACCACGCGACCCAGGACCCCGGGACAGAGGCCACAGAGCAGCCTGAGGGGC------GGGGCGGGGCCAAGTCAGAGGCAAGCCCGCC-CGCCTTG------CCCCGCCCCTGCCGTCCTGCCC i canFam3.chr1 C 0 C 0 a score=525804.000000 s hg38.chr19_GL949748v2_alt 137211 214 + 1064304 GCCAATAGGAAGCATGCGTATTGGTTGGGGGGGGGGGGGCGGGACTTTCAGGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGATGTCGCCGCCGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG s panTro4.chr19 59071247 213 + 63644993 GCCAATAGGAAGCACGCGTACTGG-GGGGGGGGGGGGGGCGGGACTTTCAGGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGATGTCGCCGCGGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCCAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947943 207 + 60714840 GCCAATAGGAAGCATGCGTATCTG-------AGGGGAGGCGGGACTTCCAAGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGGTGTCGCCGCCGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCTAGCGCAAGCAAAGGGAGCAGGCAGAGGCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713962 212 - 106955855 GCCAATAGGAAGCATGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGCCTAGACCGGAC----CCAGGTGTCGCCGCGGTAGGGGCGGGGCCCGAGGGAAGTAACCCACTAAAACAAAGGCGGGGAGTGGG-GAGATCAGCGGACCTAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002277 200 + 64156825 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGGACTAGACGGAGC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCCCAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGGGGGGGAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025794 200 + 59248254 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGAACTAGACGGAGC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGGGAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132044 199 + 51301725 GCCAATAGGAAGCAAGCGTATCTg--------gggggggCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGGACTAGACAGGAC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGGAAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843179 199 + 50890351 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAT-CTCCAC------GTGGAGAGGGTGTGTCCA-------------GAGGACTAGACGGGAC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGTGAGAACTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416739 217 + 49145316 ACCAACAGGAAGCACGCGTAACTG-------ACGTGGGCCGGGACTTTCAAGACTCCACGTGGAGGTGGAGGAGGTGGGTCCAGAGGGCGGGTCCTGAGGACTAGACTAGACAGGACCCGGCGT-GCGGCGGTAGGGGCGGGGCCAGAGGGAAGG----CACTAAAACCAGGATGGGAAGCGAG-GCGACCTGCGGACCCAGGGCAAGCAAAGGGAGCCAGCAGAGGCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19626349 104 - 122678785 GCCAATCAGAAGTGAATATATTTG-------AATAGGGGTGGAGTTTTCAGT------C------CTGGAGGGGGTGTGTCTA---------------------------------------------------------------GAGGGAAGTAACT-----------AGGTGAGAGGGGGC-GGGGCCTGCAGAC-------------------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3667688 1787 + 145441459 I a score=1106245.000000 s hg38.chr19_GL949748v2_alt 137425 308 + 1064304 GAATGGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCACGGCCT-C-GTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATATCAGAAAGAACTCGGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T s panTro4.chr19 59071460 309 + 63644993 GAATGGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-TGGTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATGTCAGAACGACCTCAGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGA------T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948150 308 + 60714840 GAATAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCACAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714174 306 - 106955855 GAATAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGA-GGGGCGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGG-CCCAGGCGTCCGAGTCTCCACATCTCAAGC---CTATGAGACC--GTCAGTACTTTCTCT-GGGGG------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002477 309 + 64156825 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGGGGGGGTGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAAACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025994 309 + 59248254 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGGGGGGGTGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132243 291 + 51301725 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGat-g-gggcagggcctgg-gtccTAGG--------------------GGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCactgaagaaggaagaaataggTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843378 309 + 50890351 GAACAGTAAAAAGGT------GCACGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGT-GGGGCGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCAAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCTGGGGGG------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416956 293 + 49145316 GAATAGCAAAAAGGTGAAATAGCACGGTGAGAAGGACAGCACGAT-GTGGGCAGGGCCT-G-GTCCTGAA--------------------GGGGCGGGGCTCTCACTTTCGAGGAAACTGGATGAGCAGCGAGACTGCCAAGCCAGTCAGCAGATCAAAGAGTAGGAGCTTGTACATTTCCTGGCCCACGAGAGTCTCCCAGCACTGAAGAC-----AAATAGGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGGCCCCACGCGTCGGAGTCTCCACATCCCAAAC---CTGTGAGACCCTATCAATACTTTCTCT-GGGGG------T i calJac3.chr22 C 0 C 0 s mm10.chr7 3669475 313 + 145441459 GAATAGAAGATAGGTGGA---GCACAAT-ATAGGAACAATCCCATCG-GGATGGGGCCT-G-CTCTAATA-GGGGCAGGGCTACCAGGAAGGGCAAGGACACTTACTTCCTAGGAAACTGGACCAACAGCGTGACCAACAGGCCCATCAGCAGATCAAAGAGTACAAGTTTGTACATCTCCTGGCCCAGCCGAGTCTCCCAGCACTGAAGAAGTAAGAAATTGGT-----AGATC---AGACTCTCCTGCCTGGAGA-CCCAAGCATCTGAGGCTCCGAATTGTCAGCAAACATCAGAACCCCACTCGTGAATTGTGT-GGGTGGGCGCTT i mm10.chr7 I 1787 C 0 s canFam3.chr1 19626453 245 - 122678785 -----------------------------AAAAGGTCAAAGAAAT-G-GGGTAGGGGTG-G----------GGG---------------------------CTCACTTCCGAGGAAACTGGATGAGCAGCATGACAGCCACGCCAGTCAGCAGATCAAAGAGCAGGAGTTTGTACATCTCCTGCCCCAGCCGGGTCTCCCAGCACTGAGGAAGGAAGGCATGGGTCAGAAAGACCTCCAGATCCAGGCACCTGGAGG-TCCAAGCATCCAAGTCTCCAAATCACAAGT---------GATCCTAACAAACCTTTTTTT-GGGGG------G i canFam3.chr1 C 0 I 12 a score=79960.000000 s hg38.chr19_GL949748v2_alt 137733 27 + 1064304 CCTCGTTTTTCAAACTTTCATACCCTT s panTro4.chr19 59071769 27 + 63644993 CCTCGTTTTTCAAACATTCATACCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948458 27 + 60714840 CCTCGTTTTTCAAACATTCATACTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714480 27 - 106955855 CCTCGTTTTTCAAACATTCATACCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002786 27 + 64156825 CCTCGTTTTTCAAACATTCATACCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026303 27 + 59248254 CCTCGTTTTTCAAACATTCATACCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132534 27 + 51301725 CCTCGTTTTTCAAACATTCATACCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843687 27 + 50890351 CCTCGTTTTTCAAACATTCATACCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417249 27 + 49145316 CCTCGTTTTTCAAACATCATTATCCTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3669788 23 + 145441459 CACTGTTTATC-AGTATTCATGCC--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19626698 12 - 122678785 I a score=1351824.000000 s hg38.chr19_GL949748v2_alt 137760 426 + 1064304 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCCACGCACA--CCCATGCCGTTCTCACCGGAAGTTGTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCGAGGCGAAGAAACACGGTCCTGAAGGGGGGAAGGCA---GAGAATGGGCCCTGACCCGGTACCCACCATGTGGCAGTTCCCTTCTCA---------GTGGAACGCGCCCGC-ATTCAAC-------CCATCTCACA---GATGAAGCTGAGGCCC----AGTGACAGAATCAGGA----------------TTTCTTTCTttctttctttctt---tttttttt---tttttttttgagacagggtct s panTro4.chr19 59071796 433 + 63644993 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTCTCCTTCAGGGACCCAAGAGTCCCAGGCACA--CTCATGCCGTTCTCACCGGAAGTTGTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCGAGGCGAAGAAACACGGTCCTGAAGTGGAGGAGGCAGAGGAGAATGGGCCCTGACCAGGTACCCACCATGTGGCAGTTCCCTTCTCA---------GTAGAACGCGCCCGC-Attcaac-------ccttctcaga--tgaagaagctgaggccc----agtgaCAGAATCAGGA----------------TTTCtttcttttcttttttcttttcttttcttt---tttttttttaagacagggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948485 409 + 60714840 GGGAGAGTGTTCCAGCA-CCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCCAGGCAGAT-CCCGTGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTTCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGGAGAAACACGGTCCTGAAGGGAAG---------GAGAATGGGCCCTGACCCGGTACCCACCATGTGGcagttcccttctcc---------gtggaacgcgcccgc-attcaac-------ccatctcacagatgaagaagctgaggccc----agtgacag--tcaggA----------------tttctttctttctttctttctt------------------tttttgagacagggtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714507 417 - 106955855 GGGAGAGTGTTCCAGCA----------CCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCTAGGCAGAT-CGCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGCACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGAAGGGGGGAAGGCAGAGGAGAATGGGCCCTGACCCGGTACCCACCATGTGGCAGTTCCCGTCTCA---------GTGGAACGCGCCCGC-ATTCAGc-------ccatctcacagatgaagaagctgaggccc----agtgaCAGAGTCAGGA----------------TTTCtttcttttttttcttttt---------tc---tttttttttgagacagggtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002813 420 + 64156825 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTCAC-Attcaac-------ccatctcacagatgaagaagcagaggccc----agcgaCAGAGTCAG-----------------------ttcttttcttttctttt----cttttct---tttctttttgagacagggtct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026330 433 + 59248254 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTCTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTCAC-ATTCAAC-------CCATCTCACAGATGAAGAAGCAGAGGCCC----AGCGACAGAGTCAGGA----------TCtttctttctttcttttcttttctttt----cttttct---tttctttttgagacagggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132561 446 + 51301725 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTtccagagagagaagagcaggacCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTATCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTTGC-ATTCAAC-------CCATCTCACAGATGAAGAAGCAGAGGCCC----AGCGACAGAgtcaggatttctttctttctctctttttctctctctctttctttt----tctttctttctttctttttgagacagggtct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843714 436 + 50890351 GGGAGAGTGTTCCAGCATCCTGAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAC-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAAGTTTTACAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCC---------GTGGAACGCGCTCGC-ATTCAACATTCAAGCCCtctcacagatgaagaagctgaggccc----agcgaCAGAGTCAGGA----------------tttctttctttctttctttctt----tcttttt---tttttttttgagacagggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417276 413 + 49145316 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCCCTCCGCCCAAACCAAAAGTCTGGTCCCACGCAGCT---------CCTTCTTTCCTCTGGGGACCCTAGCGTCCCAGGCAGAC-CCCACGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGCGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACAGGGTCCTGGTGAGGGGAAGGCAGAGGAGAATGGGCCCTGACCC-GTCCCCACCACGTGGTGGTTCCCTTCTGA---------GTGGAACGCGCTCGG-ATTCAAC-------CCAGCTCACAGATGAAGAAGCTGAGGCT------GTGACACAATCAGGA--------------------------tttttctttttt----------c---tttttttttgagacagggtct i calJac3.chr22 C 0 C 0 s mm10.chr7 3669811 345 + 145441459 ------ATGTTT----------AGCTTCTTTCC-------AACCAAGGAACAG--TCCACCCAGTTCAAGGATTCCTATCCTACCTCTAGG--CCCAAGAATGCCACCTGTGTGCCCACAGCATTCTCACCGGAATTTCTTTGTAATTATAGCCGCAGGCCTTGCATCCTTCTGCCTCCATGTTTCCCCCACACGTGATCTGACTCCACAGAGAGACCAGAAGGAACACCAGCGAGGCCAGACGCAAAAACACAGTCCTG-----------------CAAGATGAA---------GGGACTCACACTGAGGTAGTG-CCTCCTGG---------ATG---CACACTCGT-GATCTCC-------TCCTC-CAC--------------------------------------------------------TTTATATTTTTCCTACCCGCcc-------ccca---cttttcacagaggaaggaact i mm10.chr7 C 0 C 0 s canFam3.chr1 19626710 380 - 122678785 GGGAGGGTGTCCTAGCACTTTAAGCTCCTTCTTCCTCTTAAACCTGGTGTCTGAACCCATCTAGTT---------CCTGCTTTCCTTCAAGGACCCAGGA-TTTGGGGC-----CCC------TTCTCACCGGTAGTTCCTTGTAATTGTAGCCACAGGTCTTACACTCTTCAGCCTCAGCCTTGCCCCCACAAGTGATCTGATTCCAGAGGGAGAAGAGCAGGACTAGCAGGGATGCCAGGCGGAGAAACACGGTCCTGGCAAGGGGAA-------CGGAATCAGCCCTGACC-AGTGTTCACCACATGCCAGCCCCCCTCCGCCCCCCACATGTGGAACACGCTCACAattcttc-------ccacttcacaaatgaagaaactgaggctctgaTGGAACAagagtcagga----------------ttt------------------------------------------------------ i canFam3.chr1 I 12 C 0 a score=7317.000000 s hg38.chr19_GL949748v2_alt 138186 6 + 1064304 cactct s panTro4.chr19 59072229 6 + 63644993 cactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948894 6 + 60714840 cactct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714924 6 - 106955855 cactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003233 5 + 64156825 cact-t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026763 5 + 59248254 cact-t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133007 5 + 51301725 cact-t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844150 5 + 50890351 cact-t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417689 6 + 49145316 caccct i calJac3.chr22 C 0 C 0 s mm10.chr7 3670156 6 + 145441459 gagtct i mm10.chr7 C 0 I 588 e canFam3.chr1 19627090 0 - 122678785 C a score=299754.000000 s hg38.chr19_GL949748v2_alt 138192 107 + 1064304 gtcacccggactggagtgcagtggcgcgatctcagctcactgcaacctccacctcccaggctcgagccattctcctgcct------------------------cagcctcccgagtagctgggactacag s panTro4.chr19 59072235 107 + 63644993 gtcgcccggactggagtgcagtggtgcgatctcagctcactgcaacctccacctcccaggctcaagccattctcctgcct------------------------cagcctcccgagtagctgggactacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948900 107 + 60714840 gtcgcccagactggagtgcagtggcgcgatctcagcttactgcaacctctacctcccaggctcaagccattctcctgcct------------------------cagcctcccgagtagctgggactacgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714930 107 - 106955855 gtcgcccggactggagtgcagtggcgcgatctcagctcactgcaacctctaccgcccaggctcaagccattctcctgcct------------------------cagcctgccgagtagctgggactacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003238 107 + 64156825 gtcgtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026768 107 + 59248254 gtcgtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133012 107 + 51301725 gtcgtacagactggagtgcagtggtgtgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844155 104 + 50890351 ---gtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggcttaagcgattctcctgcct------------------------cagcctccccagtagctgggattacag i chlSab2.chr6 C 0 I 58 s calJac3.chr22 45417695 121 + 49145316 atcgcccagactgtagtgcagtggcgtgatctcggctc-------tctccacctcccaggctcaagca---cttctgccttgagaagtaggaggctcctccaagtagcctcccaagtagctgggactactg i calJac3.chr22 C 0 I 4 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C a score=22232.000000 s hg38.chr19_GL949748v2_alt 138299 9 + 1064304 aagccacta s panTro4.chr19 59072342 9 + 63644993 aagccacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949007 9 + 60714840 aagccacta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715037 9 - 106955855 aagccacta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003345 9 + 64156825 aagccacta i rheMac3.chr19 C 0 M 128 s macFas5.chr19 55026875 9 + 59248254 aagccacta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133119 9 + 51301725 aagccaCTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417820 9 + 49145316 gggccacta i calJac3.chr22 I 4 C 0 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I a score=53959.000000 s hg38.chr19_GL949748v2_alt 138308 35 + 1064304 ccgccgggctaatattcgtatttttactacagacg s panTro4.chr19 59072351 35 + 63644993 ccgccgggctaatattcgtatttttactacagacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949016 35 + 60714840 ccgccgggctaatattcgtatttttactacagacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715046 35 - 106955855 ccgccgggctaatattggtatttttactacagaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026884 35 + 59248254 tcgccgggctaacttttgtattttcactagagaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133128 35 + 51301725 TCGCcgggctaacttttgtatttttactagagaca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417829 35 + 49145316 tcgccgggctaatttttgtatttttagtagagatg i calJac3.chr22 C 0 C 0 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=57765.000000 s hg38.chr19_GL949748v2_alt 138343 31 + 1064304 gggtttcatcatgtttgtcaggctggtctcg s panTro4.chr19 59072386 31 + 63644993 gggtttcatcatgtttgtcaggctggtctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949051 31 + 60714840 gggtttcgccatgtttgtcaggctggtctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715081 31 - 106955855 gggtttcaccatgttcgtcaggctggtctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026919 31 + 59248254 gggtttcaccgtgtttgtcaggctggtgttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133163 31 + 51301725 gggtttcaccgtgtttgtcaggctggtgttg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417864 31 + 49145316 ggctctcatctcgttggccaggctggtctcg i calJac3.chr22 C 0 C 0 s mm10.chr7 3670750 31 + 145441459 ggaactcactttgtagaccaggctggcctcg i mm10.chr7 I 588 C 0 e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=26225.000000 s hg38.chr19_GL949748v2_alt 138374 12 + 1064304 aactcctga--cct s panTro4.chr19 59072417 12 + 63644993 aactcctga--cct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949082 12 + 60714840 aactcctga--cct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715112 12 - 106955855 aactgctga--cct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026950 12 + 59248254 aactcctga--cct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133194 12 + 51301725 aactcctga--cct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417895 12 + 49145316 aactcctga--cct i calJac3.chr22 C 0 I 12 s mm10.chr7 3670781 14 + 145441459 aactcagaaatcct i mm10.chr7 C 0 I 1 s canFam3.chr1 19627090 12 - 122678785 gaatccaga--tct i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=527561.000000 s hg38.chr19_GL949748v2_alt 138386 198 + 1064304 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccAACAGAGTCAGGATTTGAATCCCTGGATTCGGTATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CGTGAGGCTGGAACCTGAGCAGGATAAAA s panTro4.chr19 59072429 198 + 63644993 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccAACAGAGTCAGGATTTGAATCCCTGGATTCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CGTGAGGCTGGAACCTGAGCAGGATAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949094 198 + 60714840 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccAACAAAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGTGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATGCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715124 198 - 106955855 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccAACAGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003484 198 + 64156825 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccAGCGGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i rheMac3.chr19 M 128 C 0 s macFas5.chr19 55026962 198 + 59248254 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccAGCGGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133206 198 + 51301725 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccagcggagtcaggatttgaatcccTGCATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417919 198 + 49145316 ccatctcggcctcccagagtgctgggattacaggcgtgagccaccgagcccagccA--AGAGTCAGGATTTGAATCCCTGGATCCGATATCCGCAGGATTTTCGTGTCTTACCTGTCAAGGCCAACGTCCCTCTGACCGCCCCCACCCCTCAT---CATTCCCAGCCCTCCCAACATGAGGCTGGAACCTCAGCAAGATTAAA i calJac3.chr22 I 12 M 244 s mm10.chr7 3670796 156 + 145441459 ctgcctctgcctccc-gagtgctgggattaaaggcgtgcgccaccacgcccggct-------------------------------------------CTTCTCTGTCTTATTTGT-AGAACCTTTTTCCACCTGTCCCTTTCCCCCTTCTGTCTGCACTCCCTTCCCATCC--CATGAGTCCAGAACCTAAGCAGGATCAAG i mm10.chr7 I 1 C 0 s canFam3.chr1 19627102 118 - 122678785 ---------------------------------------------------------------------------cactgggtccCATATCCAGGGGATTTCTGTGCCTTGTGTACTAGAGCCAGTGTCTTTCACACCAGCCCTGCC----GT---CATCCCCAG-CACACC--CACAGAGGTAGAACCTGAGCAGGATAAAA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I a score=446991.000000 s hg38.chr19_GL949748v2_alt 138584 161 + 1064304 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAATTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGCGGGA---- s panTro4.chr19 59072627 161 + 63644993 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAATTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGCGGGA---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949292 161 + 60714840 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAACACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGACATCTCCTGGGAGGGGGA---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715322 161 - 106955855 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGAACAAAGTTGACCACAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGGGAGA---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003682 161 + 64156825 ACGATCTGGAGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGCTTCTCCTGGGAGAGGGA---- i rheMac3.chr19 C 0 I 384 s macFas5.chr19 55027160 161 + 59248254 ACGATCTGGAGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGCTTCTCCTGGGAGAGGGA---- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47133404 161 + 51301725 ACGATCTGGCGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCACAGCGATGAAGATAGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGTGTCTCCTGGGAGAGGGA---- i papAnu2.chr19 C 0 I 1 s mm10.chr7 3670952 161 + 145441459 ACGATCTGTCGGCTTTGAGTGTAGCCCTCTAGTGAGGCAATGAACTTGAACACAGGAGGCAGCACAAAGTTGAACAGAGAAATGAAGATGGATGGTAGATAATCCACCAGAAGCTTGAATAGTGGGGTCTGTCGGACAAGGGGCGTCTCCTGAAAGGGAGA---- i mm10.chr7 C 0 I 46 s canFam3.chr1 19627220 165 - 122678785 GCAATCTGGTGGCTCCTGGTGTAGCCCTCCAGCAGGGCGATGAGCTTGAACACAGGTGGCAGCAAGAAGTTAACCCCAGAGATGAAGATGGATGGAAGGTAATCCACCAGGAGCTTTAGCAGTGGCATCTGCTGGACAGAGGGCGTCTCCTGGGAGAGAGGGTGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45418117 244 + 49145316 M e chlSab2.chr6 46844259 58 + 50890351 I a score=119309.000000 s hg38.chr19_GL949748v2_alt 138745 59 + 1064304 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCCGG s panTro4.chr19 59072788 59 + 63644993 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949453 59 + 60714840 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----ACGAGCCAAGCTTAAGATCCTCCCCCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715483 59 - 106955855 TGGATCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGTCAAGCTTAAGGTCCTCCCCCCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004227 59 + 64156825 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCAGA i rheMac3.chr19 I 384 C 0 s macFas5.chr19 55027322 59 + 59248254 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCAGA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47133566 59 + 51301725 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCTAAGCTTAAGGTCCTCCTCCAGA i papAnu2.chr19 I 1 C 0 s canFam3.chr1 19627385 64 - 122678785 TGGATCAAGCAAAGAAGCTCTGGGCTTCTGGTCCTCCAGAACCTTGCTAAATGTCCTCCCCCAG- i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e calJac3.chr22 45418117 244 + 49145316 M e chlSab2.chr6 46844259 58 + 50890351 I a score=13926.000000 s hg38.chr19_GL949748v2_alt 138804 13 + 1064304 CCTCTTCttc--------ttc s panTro4.chr19 59072847 13 + 63644993 CCTCTTCTTC--------ttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949512 7 + 60714840 CCtcttt-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715542 13 - 106955855 CCtcttcttc--------ttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004286 21 + 64156825 CCTCTTCTTTGTTGTttattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027381 17 + 59248254 CCTCTTCTTTGttg----ttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133625 17 + 51301725 Cctcttctttgttg----ttt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418362 12 + 49145316 -Ctttttttt--------ttt i calJac3.chr22 M 244 C 0 s canFam3.chr1 19627449 13 - 122678785 CCTTTTCTTC--------CTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=236005.000000 s hg38.chr19_GL949748v2_alt 138817 121 + 1064304 ttcttc-----tttttttttttttttttgagacagagtctcgctctgttgcccagcctagaatgcagcggtgcgatctcggctcgc-tgcaacctctgcctcccgggttcaagtgattctcctgcct s panTro4.chr19 59072860 125 + 63644993 ttcttcc-ttttttttttttttttttttgagacagagtctcgctctgttgcccaggctagagtgcagtggtgcgatctcggctcgc-tgcaacctctgcctcccgggttcaagtgattctcctgcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949519 115 + 60714840 -----------tttttttttttttttttgagacagagtctcgctctgttgcccaggctggagtgcagtggtgcgatctcggctcgc-tgcaacctctgccactctggttcaagtgattctcccacct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715555 117 - 106955855 tt---------tttttttttttttttttgagacagagtcttgctctgttgcccaggctggagtgcagtggtgcgatctcggctcgc-tgcaacctccgcctcccgggttcaagtgattctcctgcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004307 122 + 64156825 ttgt----tttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaacctccgcctcccgggttcaagtgattcttctgcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027398 122 + 59248254 ttgt----tttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaacctccgcctcccgggttcaagtgattcttctgcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133642 126 + 51301725 ttgttttgtttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaaccttcgcctcccgggttcaagtgattcttctgcct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418374 121 + 49145316 tt------ttttttttttttttttttttttgaaaaagtctgactctgtcactcagggtggagtgcaatggcgtgatctcgggtcacttgcaacctccgcttcccaggttcaagcaattctcctggat i calJac3.chr22 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e canFam3.chr1 19627462 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I a score=474212.000000 s hg38.chr19_GL949748v2_alt 138938 243 + 1064304 cagcctcctgagtagctgggattacaggcgcccaccaccacgcccgtctaa-tttttgtatttttagtagagactgtttttcaccatgttggtcaggctggtctggaactcctgacatcgtgat-ccgcccgcctcagcctcccaaagtgctgggattacaggtgtaagccaccgcgcccagccTCTCTTTTTCCTTTAAAATCCCTAAGTCCAGGGTCCGAACATACCCTCTCCCATACTTCCT s panTro4.chr19 59072985 243 + 63644993 cagcctcctgagtagctgggattacaggcgcccaccaccacgcccgtctaa-tttttgtatttttagtcgagacgggttttcatcatgttggtcaggctggtctggaactcctgacctcgtgat-ccgcccgccttagcctccctaagtgctgggattacaggcgtaagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCTCTAAGTCCAGGATCGGAACATACCCTCTCCCATACTTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949634 241 + 60714840 cagcctcctgagtagctgggattacaggcgctcaccaccacgcctgtctaa-tttttgtatttttagtaaagatgggttttcaccatgttggtcaggctggtctggaactcctgaccttgtgat-ccgcccgtctcagcctcccaaattgccgggattacaggcgtgagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCCCTAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTC-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715672 237 - 106955855 cagcctcctgagtagctgggattacaggcgc------ccacgcccgtctaa-tttttgtatttttagtagagacgggttttcaccatgttggtcaggctggtctggaactcctgacctcgtgat-ccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCCCTAAGTTCAGGGTCCAAACATACCCTCTCCCATACTTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004429 244 + 64156825 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgacctcgtgatcccccccgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcccagtcTCTCTTCTTCCTTTAAAACCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027520 243 + 59248254 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgacctcgtgat-ccccccgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcccagtcTCTCTTCTTCCTTTAAAACCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133768 243 + 51301725 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgaccttgtgat-caccccacctcagcctcgcaaagtcctgggattacaggcgtgagccaccgcgcccagtctctcttcttcctttaaaaCCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418495 193 + 49145316 cagcctcctgagtaactgaaattacaggcacgcgccaccacgcccagctaattttttgtatgtttaataaaaatggggtttcactatgttggccaggctggtctcgaactcctgacttcgtgat-ccgcccgcctcggcctcccacagtgctggaattgcaggcgtgagccaccgcgcacggcc-------------------------------------------------CCCTTACTTC-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19627462 94 - 122678785 CAGCACCCCAA---------AGTCCAAACATACACCCCCAT-CCCTCCTAA----------------------------------------------------------------------GAT-GCCCTC----CAACCT----------TGGAAATGTAAGT----------------------------------------------TCCAGGATGGAAGGACTCTCCTCCC---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=3626012.000000 s hg38.chr19_GL949748v2_alt 139181 1486 + 1064304 CTCTAAGATCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCGTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGACGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCCCGGTTCCCCAGGTCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACC----------------CGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTCCGCGGTCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-TCCCAAGACCCGCCCCTGGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGTGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCTGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTAAAAAAAAAC---A-----AACTTttttttttttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tgaagcgatccac-------ctgtctcggtct-------------cccaa----------agtgctggggttacaagcattagccaccgatcccagccCTGGCGCATCCTTTTCCTACACGCTTGGA---GCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCTTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCTTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGACCCCGCTCCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGACGGGAAGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGAGACCCCTCATATTGGGACAAATGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGCGGAGAC----ACAGTCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGTTCTGGGGTG------CAGGCACCCCAA--AGAGAGGCAGAAACCTAGGAGACAG s panTro4.chr19 59073228 1498 + 63644993 CTCTAAGGTCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGACGCCGTAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCTTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAG-GGCGCGGGCCTCCCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACCCGC------TCCGGGGCGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------GGACACAGCAACCCAAGCCCCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-TCCCAAGACCCGCCCCTGGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGTGGCCCTGCGCTTTATTCCTGGCCT-----CAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCTGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCACCGCTCGCTTCTTGTGCTTACTTAGAAAAAAAA---Attttttttttttttttttttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tcaagtgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGA---CCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCTTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGACCCCGCTCCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGAG-AGACCCGAGAGATGGGATGTGAAAGGACAGCCAGGAA-AGGGGTTATGGGGGGACCCCTCATATTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGTGGAG------ACAGTCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCCAA--AGAGAGGCAGAAACCTAGGAGACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949875 1490 + 60714840 --CTAAGATCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAACCCAGTAGACGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCAACACTGTCTCCTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCACTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGAAG----TCC-----TGGTTC----------CACCCGC------TCCGGGGCGC----------TCCGGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------AGATCCAGCAACCCAAGCCCCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-CCCCAAGGCCCGCCCCTGGTCTGCCCTGCCCA----TCAGAGGCTCTGCCCCCAGGCGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCCGCTGGCTGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTTAAAAAAAACCAAA-----AACTTtcttttttttttttt------agggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcg-------------tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcttgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGA---CCTCGGGCAGCCTTATCTCGGCCTCCTCTCAACACTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCTTACCCAGTTGCAGACCCCGCTTCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTTCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGATGGGATGTGAAAGGACAGCCAGGAACAGGGGTTATGGGGGGACCTCTCATATTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATAGGGAAAGAGTCAAAGAGGCGGAGAC----ACAGTCATT-GAAGGCAAAGTCCTGGAGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCcaaagagagaggcagaaaccgaggagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715909 1501 - 106955855 CTCTAAAATCTCTGGTATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGATGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCAGAAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCAGGCGGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACTCGC------TCCGGGGCGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCTGCCC-----------CTTCGCGGCT-------------------------------------------------------GGATCCAGCAACCCAAGCACCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCGGAGGCTCCGCCCAGCA-TCCCAAGACCCGTCTTTCGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TTTCAAG--ACGGCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGGCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTAAAAAAAAAA---A-----AAAGTttttttttttttt----------ggtatagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGACCTCCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGATCCCGCTCCCTAATCACACCTTTAATTCGTACAAGATGATGCGCTGTCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGACGGGATGTGAAAGGACAGTCAGGAACGGGGGTTATAGGGGAACCCCTCATACTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGCAGAGAC----ACAGTCATT-GAAGGCGAAGTCCAAGGGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCCAAAGAGAGAGGCAGAAACCTAGGAGACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004673 1457 + 64156825 CTGTAAGATCTCTGGCATCCCAAACTTCCATTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGA-CC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTGTTCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCTTCTCCCCACCAGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTGCGCGACCAAT--CTCAGCACCCCGGGCCCCGCCCCCGAAGCTCCGCCCAACACCCCCAAGACCCGCCCCTGGTCAGCCCCGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGTTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCTT-----------------A-----------------CTTttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggcgtctaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccTTGGTGCATCTTTTTCCTACACCCTTGGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGAG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGCGGAGCTGCC-----ACCAGATGGGGAAAGGGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGACCTGGGGCA------CAGGCACCCcacagagagaggcagaaacctaggagacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027763 1457 + 59248254 CTGTAAGATCTCTGGCATCCCAAACTTCCATTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGA-CC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTGTTCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCTTCTCCCCACCAGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTGCGCGACCAAT--CTCAGCACCCCGGGCCCCGCCCCCGAAGCTCCGCCCAACACCCCCAAGACCCGCCCCTGGTCAGCCCCGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCTT-----------------A-----------------CTTttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtgtcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccTTGGTGCATCTTTTTCCTACACCCTTGGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGAG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGCGGAGCTGCC-----ACCAGATGGGGAAAGGGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGACCTGGGGCA------CAGGCACCCCACAGAGAGAGGCAGAAACCTAGGAGACAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47134011 1442 + 51301725 CTGTAAGATCTCTGGTATCCCAAACTTCTGTTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGACCC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTCATCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGACGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAAccccagcccccatccctgcgcggccaat--ctcagcaccccgggccccgcccccgaagctccgcccaacacccccaaga----------------cccgccca----tcagaggctccgcccccaAGCGGCCCCGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCtt-----------------a-----------------cttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtgtcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgccggggttacaagcatgagccaccgatCCCAGCCTTGGTGCATCTTTTTCCTACACCCTTTGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGGG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATAGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGGGGAGCTGCC-----ACCAGATGGGGAAAGAGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACTGACCTGGGGCA------CAGGCACCccacagagagaggcagaaaccTAGGAGACAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418688 1452 + 49145316 --CTAAGATCTCTGGCGTCCCAGACTTCCGTCCCCTCC----------CTCCACCGTTGGAATTGTAGCTTCCAAGACCC----CCCGACTTCCTTTTCAAAGACCCTCCGCACCTGTAGCTCCACCGTGGACTCTGTGGCCCAGTAGACGCCATAGAACGCTGCCCCCAGGAGCGCGGCCACCAGCAGGTTGAGCAGCACCCGCACCGACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGACGCAGCATCGTCTCCTCCAGCTCCACCTGAAGGCAGGAGACGTGCCCGCTTGGACTCCATTTCCCAAGGGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTCCACGTGAACTGCTGCA-GACGTCTCGCCACCCGCTAACAACCTCCGCAG----------------TC----------CACCTGC------GGCCGAGCCC----------CCCGGGAAACCTGC---------GGCCCTTTATC--------GCCCCGCCC-----------CTCCGCGGCC-------------------------------------------------------GGGTCCCGCAATCCAAGCCCCTAACCCTCTGTGGCCAAT--CTCAGCACCC--------------AAAGCTCCGCCCAGCA--TCCAAGACCCGCCCCTTGTCAGCCCCGCCCA----CCCGAGGCTCCGCCCTCAGGCGGCCCAGCGCTTC-TGCCTGACCT-----GAAGATCCAGTTCAGCGGTTAACAAG--AC-GTGCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAGTTGCCTT-AGGCCCCGCCCGCTTCTTGGGCTTACTTTAAAAAA------A-----------------TTGTTTTTGGCGAGGGGGtagagtgggagtc------------------------------------------tccctatat----------------------------tgccc--------aggctagtctcgaactcctggac--tcaaatgattcac-------ctgcctcggtct-------------cccga----------agtactggagttacaagcataagccaccgagcccATCCCTTGCGCATCTTTTTCCTACATCCTTGGA---CCTCGGGGAGCCCTATCGCGGCCTGCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAAGAGCTTCCTAGCGTCTC-CCTGAGGCACCATCGCTGGGTTAGGCCTTGTGCCTTATCTGAGCCCAGCCCTTTCTGATCCCTACCCAGTTGCACACCGCGCCCCCTAAGCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCTGAGGCCGAAATCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCCCGGACTCTGCCAGCAGTGTCTGCTTCAGCCCGGACACGGAACTGAGAGGGG-AGACCCAGGAGACGGGATGTGAAAGGACAGTCAGGAAC-GGGGTTGTGGGGGGA--------GATGGGAGAAACGGGGAAGATGAACCCTAAAGCCTTGGGCACTAGGCGAGCTGCC-----ACCTGATGG----AGAGTC--AGAGGCAGATACACATACAGTCACTAAAAGGCAAAGTCCAAGGGA--GACTGAGAGACAGACCTGGGGTG------CAGGCATCCCAAGGAGAGAGGCAGTAACCTAGGAGATAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3671159 1150 + 145441459 CCCTAAAATCCCAGGAATTCTACACCCCAGTTCACTGCCACAGGGCTTCTTCACCTGTGGAAATGTGAGTTCTAGGACCCAAGGACCCTCCTCCTCCTCCAAGACCCTCTGTACCTGTAGTGTCAAGGTGTACTCGGTGGCCCAGTAGATGCCATAGAAGGCCGCCCCGAGCAGCGCGAGGACCAGCACGTTGAGCAGCGCCCTCATCGACCACACCTTGGCTCGTTGGCTCAGAGTCTGCTCCGCAGCACGGCGCCGGACTACTGCTTCCTCTAGGTCCACCTAAGGCCAATAGGGACTGCTTCTGGAAATCCGTCCCTTCA-GGC-----------------------CTGACTTT----------TCTTCGGATTAAACCGATATA-GCCCTCTCCTT-----------------------------------GTTC----------CATACTC------TCCAGGGCTG----------TCCGTGGGACCATT---------TAATTCTTGGG--------GCACTGGGC-----------CTCTGAAGTC-------------------------------------------------------TGGACTTGCATCCCAGG--TCTGCCACTCCTTAGTTCAT--CCCAGAACTCCAAATCTCGCCCTA----------CCTTCT-GTCCAAGGCCTACCCTTCTTTGGCCCAACACAGAACCCCAGGATCCCCCTCCTATGAGAC-----------TTCCAG---------------CTAGTTCACCTT-TTTGAAGCCAC-GTCC---------------TCATTTCACTTGGGACCA----GTCTT-AGTTC------------------------------------A--------------GTCCCTTTTCT----------------------------------------------------------------------------------------------------------------------------------------------AAATGAATTCC-------AGGTCCCAGCCC-------------CCCAA-------------------------------------CCCTCCCACCC------CGTCAGTCTCCTCCA-----------TGGCAGGCATTCCTAGCCTGGCTTCTGCTTAGCTGTCT-------------------------------------CTTAGCA---------------------------ATGCCTTGCTCCTTATCTTAGTTGGATCTTGTCTGGTTCTCATTTAGTGGTAGCTCCACCTCCCCGAGCACACCTGTAGTTCATACAAAATGATGCGCTGGCGCAGCCGCACGTGCACGTCCCCGCAGAGGCCAAAATTCCAAGCTGAGAACACTCGGTGACTGTAGCTGGTCAGAATGTCTGACTCCGCCAACAGTGTCTCCTTCAACCCGGACACCGAACTGAAAGAAC-AGACCA-------------------------CAGGAGAAGTGTTGGTGGGGGCACCTTACTTAC------------GGAACATACACTCAAAATCCTGTG--ACCAGG-----TGCC-----ACCTGTT------CAAGTCAGATAGTTACAC------AAAGTCTTT-GGAACCAAAGACTGA-AGA--GAT----AGGAGAATTTAGGGGACACTGCCAGATCTCCAGAGGAAAGAGGGAGATATCTAGGAAAGAG i mm10.chr7 I 46 I 2258 s canFam3.chr1 19627556 1435 - 122678785 --------------------------------------------------------------------------------------------------CCAGGACCCTCCACACCTGAAGCTCCACGGTGGCCCCTGTAGCCCAGTAGATTCCGTAGAAGGCCGCTCCCAGGAGTGCAATCACCAGCAGATTGAGCAGGATCCGCACCGACCACACCCTGGCTTGCTGGCCCAGGGTCCGCGCTGCAGCCTGGCGCCGCACCACAGCTTCCTCCAGCTCCACCTGAGGCCAGGAAAGACGTCCTTGTGGGCTCAAGTCCCACA-GACA----------GGCCCGGCA-----GGTGGTTCAGAACCCCAGCTCAACATGAACTGACACA-GCAG------CACCCTCTAAAGACTTCTGCAGgggatccctggatggctcggtggtttagcacctgcctttgacccagggcgtgatcctggagtcccgggatcgagttccgcatcaggctctctgcatggagcctgcttcaccctctgcctgtgtctctgcgtctctctgtgtctctcatgaataaataaataaaatcttaaaaaaaaaAAAAAAAAAAAGACTTCTGCAGTTCTTGTCCCAATCCCCCCATGGTCCTCTACTGGACAATTTAGATCTCCCACCT---------CTCCACA-GCCCAGGGCTCCAC--------ACCGCGCCCC----TCCGAGGCCCCGCCC------AGCCCT----------CCTGGGCTGGGGCGGAGTTCCAGTTCTACTT-TTTTtta--tt----------------------------------------ttttttt-aatttttatttatttatgatagtcac---------------a---------------------------------gagagagagagaggcagagacacaggcagagggagaagcaggctccatgcaccgggagcccgacgtgggactcgatcccgggtctccagaatcgcgccctgggccaaaggcaggcgccaaaccgctgcgccacccagggatcccTAGTTCTACTTTCTTGGCCTCCTTCTGGCCATGCCCAAGTCCTCACCCAGTGCAGAGG-----AGCTTCATGCCCCGCCCCCCTCCC-GCTGCCTGATTTTCCTGTCCCCTTTGA---CATCAGGTATCCCAACTGGGGCCTCGTCCCAGCCCTCTCATTTCGCAAGGCCCGCCTCCTTAGGAGAACGTTCCGCCCAGCGTCGCT--------------------TTGAGCCCCGTCTCGGGTCTGGGCCCCGCCCCCTCTGGTCCTT-------------------TCCCTGAGCTCACCTGCAGCTCATACAGGATGTTGCGCTGGCGCAGCCGCACGTGGACATCCCCACAGAGGCCGAAGTCCCAGGCGGTGAACACCCGATGGCTGTAGCTGGTCAGGGCCCCCGACTCAGCCAACAGCGTCTGTTTCAGTCCTGACACGGAGCTGAGAGAGGAAGGCCCCAGAGACGGGGTGTGGAAGGTCAGTGAGG----------GCGGGGTCACCCCTCTTAT-GGGACTAGCAGGGAA-ATGAACCCTGGGACCTTGGGAATTTGACAAGT----------------------AGAGTCAGAGACGTGCAGACACACACAGTCATG-GGAGCCAAAGACCAAGAGAGGGATTCAGGGGCCGACTGGGGAAG-----GTAGACACCCCGC--AGAGAGCCA---------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I a score=717222.000000 s hg38.chr19_GL949748v2_alt 140667 297 + 1064304 GGACAGAGCCTCGGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAAACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGGAGAAAGGGAGAAAAAGACAGTGAGAAAGGGGAAACTACATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACACAGAGAAGGGAGCTGCGGCGGGAAGAGCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGA-GGGGGCAggccaggcgcc---atggctcac s panTro4.chr19 59074726 297 + 63644993 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAGACAGAGGCCCTGAGGA-ACACAGAGATGTGGAGGAGGGACAGAGGCCCCAAAGGGA---GATTTGGAGAAAGGGAGAAAAAGACAGTGAGAAAGGAGAAACTACATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGAGCTGCGGCGGGAAGAGCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGA-GGGGGCAggccaggcgcc---atggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951365 298 + 60714840 ggacagagccccggagcgaaggggacagaaacccagagtgagagagacagaggccctgagga-agacagagatgtggaggagggacacaggccccagaggga---gatttggagaaagggagacaaagacagtgagaaagGAGAAACTAAATCTACAAAAGATGAGGGTCAAAGACCCATA-AGAAGTACAGGCACCTAGAGAAGGGAGCTGCGGTGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAGGGGGGCAggccaggcgcc---atggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717410 295 - 106955855 GGACAGAGCCCCAGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCGGAGGGA---GATTCGGAGAAAGGGAGACAAAGGCAGTGAGAAAGGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCATCCAGAGAAGGGAGCTGCGGCGGGAAGACCCG---AGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAGGGGGGCAggccaggcgcc---atggctcat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006130 297 + 64156825 ggacagagccccggagcgaagggggcagaaacccagagtgaaagggacagaggccctgagga-agacagagatgtggaggagggacagaggccccagaggga---gattcgaagaaagggagacaaagacagtgagaaagGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAAGGGGCTG-GGCGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAAGGGGGCACGCCAGGAGCC---ATGATCCAC i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55029220 297 + 59248254 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAAAGGGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGAAGAAAGGGAGACAAAGACAGTGAGAAAGGAGAAACTAAATCTCCAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGCGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--CAAGACTCAAGAGAAGGGGGCACgccaggagcc---atggctcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135453 297 + 51301725 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAAAGGGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGAAGAAAGGGAGACAAAGACAGTGAGAAAGGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGCAGGAAGACCCGAGAagaagacagagacccagagaagaTGGCAGGT--AAAGACCCAAGAAACGGGGGCacgccaggcgcc---atggctcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420140 276 + 49145316 GGACAGAGCCCCGGATCGAAGGGGCCGGAAAGCCAGTGTGAGAGGGGCAGAGGCCCTGAGGA-AGAT--GGATGCGGAGGAGGGATGGAGGTCCCAGAGGGA---GATTTGGAGAAAGGGAGACAAAGAC--TGAGAAAGGAGAAAGAAAATCTACAAAAGACCCGGGTCAGAGATCCAGA-GGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGTTGGGA------------------AGACCCAGAGAAAACAGCAGGTAGAGAGAATCAAGAGA-GGGGGCAggccaggtgcg---gtggctcac i calJac3.chr22 C 0 C 0 s canFam3.chr1 19628991 262 - 122678785 ----CGCGCTCCAGAGAGCAGAGGGCGGGGACCCAGAGTGACAAAGACAAAGATCCTGGGGACAGACACAAATGTAGAGGGGAGACTGCGACCCCACTGGGAAAGGATTCAGAGAAAGTG-------GACA--GGGAAATGAGGGAAGAGGTCT-----AGAGAGAGGTCAGAGACTCAGAGGGAAGGACAGACGTCCAGAGAAGGGGGTGA-GGGAGAAAGACCC---------------------AAAGGGTGGAGGAC--TGAGACTCAAAGAAATGGGGCAgg---gacgcctgggtggctca- i canFam3.chr1 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=33876.000000 s hg38.chr19_GL949748v2_alt 140964 19 + 1064304 gcctgtaatcccagcactt s panTro4.chr19 59075023 19 + 63644993 acctgtaatcctggcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951663 19 + 60714840 acctgtaatcccagcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717705 19 - 106955855 gcctgtaatcccagcactt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55029517 19 + 59248254 gcctgtaatcccagcactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135750 19 + 51301725 gcctgtaatcccagcactt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420416 19 + 49145316 acctgtaatcccagcactt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629253 19 - 122678785 gcggttgagcgtctccctt i canFam3.chr1 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60006427 19 + 64156825 I a score=144045.000000 s hg38.chr19_GL949748v2_alt 140983 81 + 1064304 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagac---cagcctggccaatgtggtgaaaccccgtctctact s panTro4.chr19 59075042 81 + 63644993 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagat---cagcctggccaatgtggtgaaaccccatctctact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951682 81 + 60714840 tgggaggccaaggggggaggatcacctgaggtcaggagtttgagac---cagcctggccaatgtggtgaaaccccgtctctact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717724 81 - 106955855 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagac---cagcctggtcaatgtggtgaaatcccgtctctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006446 79 + 64156825 tgggaggccgagacgggcggatcac--gaggtcaggagatcgagac---catcctggctaacacggtgaaaccccgtctctact i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55029536 49 + 59248254 tgggaggc--------------------------------cgagac---catcctggctaacacggtgaaactccctctctact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135769 78 + 51301725 tgggaggccgagacgggcggatcac--gaggtcaggagt-cgagac---catcctggctaacacggtgaaaccccctctctact i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420435 81 + 49145316 cgggaggccgagtagggaggatcacctgaggtcaggagttccagac---cagcctggccaacatggtgaaaccctgtctctact i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629272 75 - 122678785 ----aggctcagg-----gcatgatcctgggtctggggattgaatcccacatccggctccctgtggggagcctgcttctccctc i canFam3.chr1 C 0 I 85 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=193134.000000 s hg38.chr19_GL949748v2_alt 141064 98 + 1064304 aaaaa---tac-aaaaattagccaggcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag s panTro4.chr19 59075123 98 + 63644993 aaaaa---tac-aaaaattagccaggcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951763 98 + 60714840 aaaaa---tac-aaaaattagccaagcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717805 98 - 106955855 aaaaa---tac-aaaaattagccaggcatggtggtgcatgcctgtaatcccaactacttgggaggctgagctgggagggtcactcaaacccaggaggtggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006525 100 + 64156825 aaaaa--atacaaaaagctagccgggcgaggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggag i rheMac3.chr19 C 0 I 3618 s macFas5.chr19 55029585 102 + 59248254 aaaaatttttttaaaaattagccgggcgaggtggcgggcgcctgtaggcccagctactcgggaggctgaggcaggagaatggcgtaaacccgggaggcggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135847 99 + 51301725 aaaaa---tacaaaaaactagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420516 99 + 49145316 aaaaa---tttaaaaaatgagccaggtgtggtggcgggcacctgtaatcccagctacttgggaggctgagtcaggaggatcacttgaacccaggaggtggag i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I a score=4863.000000 s hg38.chr19_GL949748v2_alt 141162 5 + 1064304 gtcgc s panTro4.chr19 59075221 5 + 63644993 gtcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951861 5 + 60714840 gtCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717903 5 - 106955855 gtCAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55029687 5 + 59248254 cttgc i macFas5.chr19 C 0 I 9250 s papAnu2.chr19 47135946 5 + 51301725 cttgc i papAnu2.chr19 C 0 I 3196 s calJac3.chr22 45420615 5 + 49145316 gttac i calJac3.chr22 C 0 I 25 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=10070.000000 s hg38.chr19_GL949748v2_alt 141167 25 + 1064304 ---------------------CTCC----------AAAAAAAAAAAAAAAAGACCC s panTro4.chr19 59075226 26 + 63644993 ---------------------CTCC---------GAAAAAAAAAAAAAAAAAACCC i panTro4.chr19 C 0 I 118 s ponAbe2.chr19 55951866 19 + 60714840 ---------------------CTCC----------------AAAATAAAAAGGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717908 25 - 106955855 ---------------------CTCC----------AAAAAAAAAAAAAAAAGACCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420645 56 + 49145316 ctccagcctggctgacaaagactcctgctcaaaaaaaaaaaaaaaaaaaaaaaCAC i calJac3.chr22 I 25 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=422.000000 s hg38.chr19_GL949748v2_alt 141192 1 + 1064304 A s panTro4.chr19 59075370 1 + 63644993 A i panTro4.chr19 I 118 C 0 s ponAbe2.chr19 55951885 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717933 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420701 1 + 49145316 A i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=226477.000000 s hg38.chr19_GL949748v2_alt 141193 244 + 1064304 GAGA-AGACGGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccatgtgcaccttcactgccctggccccggcccccatcatctctcatgtgaacaaccacagagggccctcacatggtctccttgcttccacttgtgcccgcatataatccattctcagttcttgagccagtgggacc-ttctttt s panTro4.chr19 59075371 244 + 63644993 GAGA-AGACGGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccgtgtgcaccttcactgccctggccccggcccccatcatctctcatgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcccgcttataatccattctcagttcttgagcgagtgggacc-ttctttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951886 244 + 60714840 GAGA-AGACAGGCAGGTAAAGAGACTCAAGAGAGGTGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccatgtgcaccttcaccgccctggccctggcccccatcatctcgcatgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcctgcttataatccattctcggttcttgagccagtgggacc-ttctttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717934 245 - 106955855 GAGA-GGACAGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAAGAAGGAGAT-AGAGAACTCTA-----GCAGGGGCAGGAACAGAACTGGACAAAGAGa--ccatgtgcaccttcactgccctggccctggcccccatcatctctcacgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcccgcttataatccattctcagtttttgagccagtgagacctttctttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420702 244 + 49145316 GAGACAGAC---CCCGAGAAGAGTCTCAAAAAAGGGGGGCAAAGACCCAGGAAGGAGATGGGAGAACCACAGCGGGGCAGGGGCAGACACAGAGCTGGACAGAGAGa--ccacgtgcaccttcaccgccctggccct-gcccccatcatct--catgtgaacaacctcagagggcccccacctggtctccttgcttccacctgtgcct-cttataatccattctctcttcttcagccagcaggacc-ttcttcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629432 226 - 122678785 gaaa-agagggaaagggaaagggaaaggaagaagtggggcaaagacccagggagaggac-aaggaa----------gcagag--------aaaaCTGGGCAAAGAGATTccatatccaccctcaatgacctggcacaagcccccagaatctcttgagtggatgactacaga--actgccacctggcctc--tgcttccaccctcgccctcttg-aatccattct--gttcccacactggtggaacc-ttctttt i canFam3.chr1 I 85 I 4004 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=44574.000000 s hg38.chr19_GL949748v2_alt 141437 76 + 1064304 gatgcaactcagaccgtattcccctgtttaagacctattccagggcttttcccttctcttaaaatcgaggc-TCTTT s panTro4.chr19 59075615 77 + 63644993 gatgcaactcagaccgtattcccctgtttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952130 75 + 60714840 gattcaactcagaccgtattccc--atttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTTTTg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102718179 77 - 106955855 gatgcaactccgactttaattcccggtttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTCTTg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420946 61 + 49145316 ta-gcaactcagaccatatt--------------ctattccagggcttttccctgctcttccaatctaggcttctt- i calJac3.chr22 C 0 I 2664 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=48909.000000 s hg38.chr19_GL949748v2_alt 141513 91 + 1064304 gccgggcgtggtggctcacgcctgtaatcccagcactttgggagaccgaggcgggtgcatcacctgaggtcaggagttcgagaccagcctg s panTro4.chr19 59075692 91 + 63644993 gccgggcatggtggctcacgcctgtaatcccagcactttgggagaccgaggcgggcgcatcacctgaggtcaggagttcgagaccagcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952205 91 + 60714840 gccaggcgcagtggctcacgcctgtaatcccagcactttgggagaccgaggtgggcggatcacctgaggtcaggagttcgagaccagcctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102718256 91 - 106955855 gccgggcacagtggctcacgcctgtaatcccagcactttgggagaccgaggcgggcagatcacctgaggtcaggagttcgagaccagcctg i nomLeu3.chr10 C 0 M 1121 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=242761.000000 s hg38.chr19_GL949748v2_alt 141604 936 + 1064304 acaaacatggtgaaaccccatttctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgggaggttgaggcaggaaaattgcttgaacccgggcggcggaggttgcagtgagctgagatcgcaccactgcactctagcctgggtgacagagcgagactccgtctc----aaaaaaaaaaaaaGTTGACTTTTggccaggcacattggctcatgcctgtaattccagcaccttgggaggctgaggtgagcagatctcttgagcctaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataacatt---aaaaaaaaaattttagcaagacatggtggtgcacccctgtggtcccagctgctcccgaggctgaggtaggcggatcagttgagttccggaggcccaggcttccggtgagctatgattgcaccaccgcacgctagccgggtgacagagtgagaccctgtctcaaaaaacaaaaCAgactgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggccggagcctgtaaacccagctacttgggagggtgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacagagtaagactctgtctcaaaaacaaacaaacaaaacaaatg------aaaaaCAAAAAC--AAATCCCAAAACCTTGA-tcttttttttttttttagatggagtttcgctctgtcgcccaggctggagtgcagtggcgcaaactcggctcactgcaagctccgcctcc s panTro4.chr19 59075783 946 + 63644993 accaacatggtgaaaccccatttctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgagaggctgaggcaggaaaattgcttgaacccgggaggcggaggttgcagtgagctgaggtcacaccactgcactctagcctgggtgacagagcaagactccgtctc-aaaaaaaaaaaaaaaaGTTGACTTTTggccaggcacattggctcatgcctgtaatcccagcaccttgggaggctgaggtgagcagatctcttgagcctaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataacatt---aaaaaaaaatttttagcaagacatggtggtgcacccctgtggtcccagctgctcctaaggctgaggtaggaggatcagttgagttccggaggcccaggcttccggtgagctatgattgcaccactgcacgctagtcgggtgacagagtgagaccctgtctcaaaaaacaaaaCAgactgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggctggagcctgtaaacccagctacttgggaggctgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacagagtaagactctgtctcaaaaacaaacaaacaaaacaaatgaaaaaCAAAAACAAAAAC--AAATCCCAAAACCTTGAtttttttttttttttttagatggagtttcactctgtcgtccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952296 928 + 60714840 accaacatggtgaaaccccatctctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggaaaattgcttgaacctgggaggcggaggttgcagtgagctgagatcgcaccactgcactctagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaGTTGACTTTTggccaggcaccttggctcatgcctgtaattccagcaccttgggaggctgaggtgagcagatctcttgagcccaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataatattaaaaaaaaaaaaaaattagcaggacatggtgatgcgcccctgtggtcccagctgctccagaggctgaggtaggaggaccagttgagttccggaggcccaggcttccagtgagctatgattgcaccactgcactctagccaggtgacagagtgagaccctgtctcaaaaaacaaaaTAGACTCAgcgcggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggcgggagcctgtaaacccagctacttgggaggctgaggcagtagaatcgcttgaatccgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgacagagtaagactctgtctca-------------aaaacaaatg------aaaaacaaaaacaaaaaTCCCAAAACCTTGA-----tcttttttttttagatggagtttcgctctgtcgcccaggctggagtgcaatggcatgatcttggctcactgcaacctccacctcc i ponAbe2.chr19 C 0 I 225 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45421007 2664 + 49145316 I e nomLeu3.chr10 102718347 1121 - 106955855 M e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=1213.000000 s hg38.chr19_GL949748v2_alt 142540 3 + 1064304 tgg s panTro4.chr19 59076729 3 + 63644993 tgg i panTro4.chr19 C 0 I 188 s nomLeu3.chr10 102719475 3 - 106955855 TGA i nomLeu3.chr10 M 1121 C 0 s papAnu2.chr19 47139147 3 + 51301725 tga i papAnu2.chr19 I 3196 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=558.000000 s hg38.chr19_GL949748v2_alt 142543 2 + 1064304 gC s panTro4.chr19 59076920 2 + 63644993 gc i panTro4.chr19 I 188 C 0 s nomLeu3.chr10 102719478 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139150 2 + 51301725 ga i papAnu2.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=8476.000000 s hg38.chr19_GL949748v2_alt 142545 12 + 1064304 CACCGCTCCTGG s panTro4.chr19 59076922 12 + 63644993 caccgctcctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719480 12 - 106955855 CACTGCGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010243 12 + 64156825 caccgcacccgg i rheMac3.chr19 I 3618 C 0 s papAnu2.chr19 47139152 12 + 51301725 caccgcgcccag i papAnu2.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=50500.000000 s hg38.chr19_GL949748v2_alt 142557 43 + 1064304 CCCAAAACCTTGATTTTAACTCACACAGAATAAAGGGTTACAC s panTro4.chr19 59076934 43 + 63644993 ccCAAAACCTTGATTTTAACTCACACAGAATAAAGGGTTACAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719492 43 - 106955855 CCCAAAACCTTGATTTTAACTCACATAGAATAAAGGGTTATAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010255 43 + 64156825 cACAAAACCTTGATTTGAACTCACACAGAAGAAAGGGTTACAC i rheMac3.chr19 C 0 I 3 s papAnu2.chr19 47139164 43 + 51301725 caCAAAACCTTGATTTGAACTCACACAGAAGAAAGGGTTACAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423671 43 + 49145316 CCCCAAATCTTGATTTTAACTGAAACAGAAGAAAGGGTTACAC i calJac3.chr22 I 2664 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=1566.000000 s hg38.chr19_GL949748v2_alt 142600 3 + 1064304 AGC s panTro4.chr19 59076977 3 + 63644993 AGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719535 3 - 106955855 AGT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139207 3 + 51301725 CGC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423714 3 + 49145316 AGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=9180.000000 s hg38.chr19_GL949748v2_alt 142603 97 + 1064304 AAGACCGAGGATTCTGGggccgggcgcggtggctcacgcctgtaatcccagcactgtgggaggccgaggcgggtggatcacgaggtcagcagttcaa s panTro4.chr19 59076980 97 + 63644993 AAGACCGAGGATTCTGGggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcagcagttcaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45423717 0 + 49145316 C e nomLeu3.chr10 102719538 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139210 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=54493.000000 s hg38.chr19_GL949748v2_alt 142700 212 + 1064304 gaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaaagttagctgggcgtggtggcgggcgcctgtaatcccagcaacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggttgcagtgagccgagattgcgccactacactctagcctgggcaataagagcaaaactccgtctcaaaaaaaaa s panTro4.chr19 59077077 212 + 63644993 gaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaaagttagctgggcgtggtggcgggcgcctgtaatcccagcaacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggtcgcagtgagccgagattgcgccactatactctagcctgggcaataagagcaaaactccgtctcaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953449 211 + 60714840 gaccagtctgatcaacatggtgaaaccccctttttactaaaaatacaaaaaaattagctgggcgttgtggcgggcgcctataatcccagcaacttgggaggttgaggcaggagaatcgcttgaaaccgtaaggcagaggttacagtgagccgagattgtgccattgcactctag-ctgggcaataagagcaaaactccgtttcaaaaaaaaa i ponAbe2.chr19 I 225 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45423717 0 + 49145316 C e nomLeu3.chr10 102719538 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139210 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=130995.000000 s hg38.chr19_GL949748v2_alt 142912 79 + 1064304 a-------agaCTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACCACTTGCT-CCCCCACCCCAACCCGTCCCGTCA-GGGGTCAG---- s panTro4.chr19 59077289 78 + 63644993 a--------gaCTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACCACTTGCT-CCCCCACCCCAACCCGTCCCGTCA-GGGGTCAG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953660 88 + 60714840 aaaagaaaagaCTGAGGATTCTTGGGGAGGCGGTTTCTGCCACCACCACTTGCTCCCCCCACCCCAACCCGTCCCGTCAGGGGGTCAG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102719538 80 - 106955855 -------AAGACTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACTACTTGCT-CCCCCACCCCAACCCGTCCCGTCAGGGGGTCAG---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010301 80 + 64156825 -------AAGACTGAGGATTCTTGGGGAGGGAGTTTCTGCCACCACCACTTGCT-TTCCTACCCCAACCCGTCCCGTCACGGGGTCAG---- i rheMac3.chr19 I 3 C 0 s papAnu2.chr19 47139210 80 + 51301725 -------AAGACTGAGGATTCTTGGGGAGGGAGTTTCTGCCACCACCACTTGCT-TCCCTACCCCAACCCGTCCCGTCACGGGGTCAG---- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423717 76 + 49145316 -------AAGGCTGAGGATTCCTGGGGAGGGAGTTT-TGCCAGCACCACTTGCT-CCC---CCCCCACCCGTTCTTTCAGGGAGTCAG---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19633662 71 - 122678785 -------AGGACTCTGGATTCTTGGGGACTGGTCCTCTACCACCACCACTC-CT-TCCCCACGACACC------------AGGGTGGGGATG i canFam3.chr1 I 4004 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=599252.000000 s hg38.chr19_GL949748v2_alt 142991 257 + 1064304 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGGGA-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGGTCA s panTro4.chr19 59077367 256 + 63644993 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGG-A-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCCTGTCATTGAAGGCACTGGGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953748 257 + 60714840 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAACCATAAAAGAGAGGGGACCATTCCAGGTAACCCTGTT-GGGGGA-AGGCGACGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAAGTTCGTGTCACTGACGGCACTGGGCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102719618 257 - 106955855 GGGTGCAGGTGCCACTGACCGACGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGGGA-AGGCGGTGCAGGGGCCACTGTGGGA------GGAGGAGGGGCTCCTGGAGCTGCACAGTCAGGGTCCGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010381 258 + 64156825 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAAGAGGCAGATGAGGCCGACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTGGGGGGGA-AGGCGGCGCGGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47139290 258 + 51301725 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAAGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTGTGGGGGA-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423793 254 + 49145316 GGGTGCAGGTGCCACTGACCGATGCAGGATGAACAGGAGGCAGATGAGGCCAACAGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGTGTGGGCGGGGCGGGTAGAAGCCATAGAACAGAGGAGACCATTCCAAGTAACCCTGTG-GGGGGA-AGGTGG-GTCGGGGCCACTGTGGGA------GGAGGCAGGGCTCCTGGCGATGCATAATCAGGGTCTGGGGTCAGGGTTTGAGGGGCGTGT--TTGAAAGCACAGGGTTCA i calJac3.chr22 C 0 I 342 s mm10.chr7 3674567 244 + 145441459 GGATGTGGGCATCACTAACCGTCGTAGGATGCACAGCAAGTAGATGATGCTGATGGCAAAGACGGAGCACAGGTAGGTGATGGCCAGGTTCGATCGGGGTGGGTAGAACCCATAGAATAGAGGGGACCACTCAAGGTAACCCTGGG-GAGGAAGAGGCAGAACAAAGGTCATAGTGGGGCCGGGTGGAGGTAACGATCAGGGAGCTGAGTGATCTGTGTGTG--------------------TGTCGTCCAGGAAACCAGGCTTC i mm10.chr7 I 2258 I 1 s canFam3.chr1 19633733 201 - 122678785 GGGTGCGGTTGTTACTTACCGATGGAGGATGAGCAGCAGATACAGGAGGCCAATGACAAAGACAGAGCACAGATAGGTGACTGCCAGGTGTGCGCGGGGTGGGTAGAACCCATAGAAGAGGGGAGACCATTCTAGAAAACCCTGCA-GAGGAA-AAGT----------TCACCGTGGGC------TTAGG-------------------CAATCAGAATCGGGGGGTA----CTGAGGCTCG----------------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=12211.000000 s hg38.chr19_GL949748v2_alt 143248 9 + 1064304 CAGGTGGGC s panTro4.chr19 59077623 9 + 63644993 CAGGTGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954005 9 + 60714840 CAGGCGGGC i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102719875 9 - 106955855 CAGGTGGGC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60010639 9 + 64156825 CAGGTGGGC i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47139548 9 + 51301725 CAGGTGGGC i papAnu2.chr19 C 0 I 1 s mm10.chr7 3674812 8 + 145441459 AAAGTAAG- i mm10.chr7 I 1 C 0 s canFam3.chr1 19633934 6 - 122678785 ---GTGGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45424047 342 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=827427.000000 s hg38.chr19_GL949748v2_alt 143257 298 + 1064304 GGGGAATCCCCCAGGGACCCAGGCACCTACCTCACCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGATGTCGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATGAGCACAGAGGCCAGCACGTTAAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT s panTro4.chr19 59077632 298 + 63644993 GGGGAATCCCCCAGGGACCCAGGCACCTACCTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGAAGCCGCAGGGCGAGGAGATGTTGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGAGTCATGCAGGCCATGAGCACAGAGGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGACAGAGGCTCAGGTTCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954015 298 + 60714840 GGGGAATCTCCCAGGGACCCAGGCACCTACCTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGATGTTGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAGAGGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102719885 298 - 106955855 GGGGAATCTCCCAGGGACCCAGGCACCTACTTCTCCCGACAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGGGCCGCAGGGCGAGGAGATCTCGAGGCCGCGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAAACGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCTTT i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60010649 302 + 64156825 GGGGAAACTCCCAGGGCCCCAGGCACCTACTTCTCCTGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGGGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGGTGTTGGAGCCCGGAGGGCCTGGGGGAGCGCCTCCCAGCCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAGAGGCCAGCACGTTGAGGAGGAGTAGGAAGCGCAGCAGGGAGAAGTAGGACTCGGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGCAGAGAGAGAGAGGCTCAGTTTCCTT i rheMac3.chr19 I 1 C 0 s papAnu2.chr19 47139558 298 + 51301725 GGGGAAACTCCCAGGGCCCCAGGCACCTACTTCTCCTGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCaggccctgggggtgggggttatAGGAGCCACAGGGCGAGGAGGTGTTGGAGCCGGGAGGGCCTGGGGGAGCGCCTCCCAGCCAGGTGGGCAGCAGCGTCATACAGGCCATAAGCACAGAGGCCAGCACGTTGAGGAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCGGTGCCGGCGCCAAACTGGCCTGcagggggcagc----agagagaggCTCAGGTTCCTT i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45424389 298 + 49145316 GAGAAATCTCCCAGGGACCCAGGCACCTACTTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGTCGAAGGAGACCAGGCCCTCGGAGTGGGGATTATAGAAGCCGCAGGGCGAGGAGGTGTTGAGGCCGGGAGGGCCTGGGGGAGCGCCTTCCAGCCAGGTGGGCAGCAGCGTCATGCAGGCCATGAGCACCGAGGCCAGCACGTTGAGGAGCAGCAGGAAGCGCAGCAGAGAGAAGTAGGACTCGGCGCCGGCGCCAAACTGACCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT i calJac3.chr22 I 342 C 0 s mm10.chr7 3674820 296 + 145441459 -GAGGTTCCTCTGGGGACCATGGCACCCACCTCTCCAGAGAGCAAGTTGAAAAGCTGGGTGGGGAAGGCGACCAGGCCATGAGTGTGTGGAATATAGGAACCACAGGGTGAAGAGATGTTAGGGCCAGGGGGACCTGGAGGAGCCCCTTCCAGCCAGGTGGGGATCAGCTTCATGCAGATTTCAATGACAGATGCCACCAGGTTGAGAAAGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCAGTGCCTGCTCCAAACTGACCTGCAGAGGGCAGC----AGAGAG-GCCTCAGGTCCCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19633940 293 - 122678785 ---GGGTCTCCCAGGGCTCCAGGGACGCACCTCTCCTGACAGCAAGTTGAGGAGATGGGTGGGGAAGGTGACTAGGCCTTGGGGGCTGGGGTTGTAGAAGCCACAGGGCGAGGAGGTGTCAGAGCCAGGGGGACCCGGGAGGGTCCCTTCCAGCCAGGTGGGCAGCAGTGTCATACAGGCCTTAATTACAGACGCCAGCACGTTGAGAAGCAGCAGGAAACGCAGCAAGGAGAAGTAGGACTCGGTGCCGGCACCAAACTGGCCTACAGGGGGT-GC----AGAGAG-GCCTGGGGCTCCTG i canFam3.chr1 C 0 I 8 e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=30693.000000 s hg38.chr19_GL949748v2_alt 143555 20 + 1064304 CCCGGGAGCAGGACCAGCCC s panTro4.chr19 59077930 20 + 63644993 CCCGGGAGCAGGACCAGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954313 19 + 60714840 CCCGGGAGCA-GACCAGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720183 19 - 106955855 CCCGGGAGCA-GACCACCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010951 20 + 64156825 CCCGGGAGCAGGACCAGCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47139856 20 + 51301725 CCCGGGAGCAGGGCCAGCTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45424687 20 + 49145316 TCTGGGAGCAGGACCAGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3675116 19 + 145441459 ACCAGT-GTAGTTCCAACCC i mm10.chr7 C 0 I 114 e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=58091.000000 s hg38.chr19_GL949748v2_alt 143575 45 + 1064304 CTCCTACCCCTGGACT-GGGGTCCAGCCGCGCCTTCctttctttct s panTro4.chr19 59077950 45 + 63644993 CTCCCACCCCTGGACT-GGGGTCCAGCCGCGCCTTTCTTTCTTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954332 45 + 60714840 CTCCCACCCCGGGACT-GGGGCCCAGCCGCGCctttctttctttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720202 42 - 106955855 CTCCCACCCCGGGACT-GGGGCCCAGCCGCGCCtttcttttct--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010971 46 + 64156825 CTCCCATCCCGGCACTGGGGGCCCAGCCGTGCCTTGCTTTCTTTCt i rheMac3.chr19 C 0 I 34 s papAnu2.chr19 47139876 46 + 51301725 CTCCCATCCCGGCACTGGGGGCCCAGCCGTGCCttgctttctttct i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45424707 45 + 49145316 CTCC-ACCCCGGGACTCGGGGCCCAGGGGCGCCGCCtttttctttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=-131.000000 s hg38.chr19_GL949748v2_alt 143620 4 + 1064304 -ttct s panTro4.chr19 59077995 4 + 63644993 -TTCt i panTro4.chr19 C 0 I 52 s ponAbe2.chr19 55954377 4 + 60714840 -ttct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47139923 3 + 51301725 -ttt- i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45424752 4 + 49145316 gttc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e nomLeu3.chr10 102720244 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I a score=910.000000 s hg38.chr19_GL949748v2_alt 143624 1 + 1064304 t s ponAbe2.chr19 55954381 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720244 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139926 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45424756 1 + 49145316 t i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=2629.000000 s hg38.chr19_GL949748v2_alt 143625 31 + 1064304 ttctt--tcttttctttctttctttcttttctt- s ponAbe2.chr19 55954382 22 + 60714840 t--------ctttctttctttctttc---tctt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720245 28 - 106955855 ttctt--tcttttctttttttctttt---ttct- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45424757 31 + 49145316 ttatttattttttatttatttattta---ttttt i calJac3.chr22 C 0 I 1379 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139927 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=16156.000000 s hg38.chr19_GL949748v2_alt 143656 201 + 1064304 tctttctttttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttcttttctttctttctttctttctttcttcctttctttcttttctttccttccttccttccttccttccttccttccttccttccttccttccttccttcctttctttctctctctctctctctctatata s ponAbe2.chr19 55954404 137 + 60714840 tctttcttttcttttctttctttctttctttctttctttctttctttctttctttttttctttctttc------------------------------------------tttctttccttccttccttccttccttccttccttacttccttccttccttccttccttcctttctttc---------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720273 139 - 106955855 tttcttttttcttttcttttcttttcttttcttttcttttcttttcttttcctctcctctcccctttcgt----------------------------------------ttcctttcctttccttttctttttctTTCT----------------------Ctctctctctctctttctatatatatatatatacatata i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139927 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=-3610.000000 s hg38.chr19_GL949748v2_alt 143857 33 + 1064304 tatatatatatatttttcttttcttttcttttc-- s ponAbe2.chr19 55954541 16 + 60714840 --------------tttctt---tttttttttt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720412 13 - 106955855 tatatatatatat---------------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139927 25 + 51301725 ----------tattattattattgttatttgttat i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=2768.000000 s hg38.chr19_GL949748v2_alt 143890 8 + 1064304 tttttttt- s panTro4.chr19 59078051 8 + 63644993 tttttttt- i panTro4.chr19 I 52 C 0 s ponAbe2.chr19 55954557 8 + 60714840 tttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720425 8 - 106955855 tttttttt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139952 5 + 51301725 ----tatta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I a score=203010.000000 s hg38.chr19_GL949748v2_alt 143898 166 + 1064304 tttttgagacggagtttcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcacgagtagctgggattacaggcgtgcgccaccatgctcagctagtttttgtatttt s panTro4.chr19 59078059 166 + 63644993 tttttgagacggagtttcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcacgagtagctgggattacaggcatgcgccaccatgctcagctggtttttgtatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954565 166 + 60714840 tttttgaaacggaatctcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgtctcagcctcgcgagtagctgggactacaggcgtgggccaccatgcccagctagtttttgtatttt i ponAbe2.chr19 C 0 M 804 s nomLeu3.chr10 102720433 166 - 106955855 tttttgagacggagtttcgctctgctgcccagcatggagtgcagcggcatgatcttggctcactgcaacctccgccttctgggttcaagcaattttcctgtctcagcctcccaagtagctgggattacaggcgtgcgccaccatgctcagctagtttttgtatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011051 165 + 64156825 tttttgagacggagtctctctctgccgcccaggccggagtgcagtggcgtgatctcggctcactgcaaccttcgcctcccaggttcaagcaattcaccgatctcag-ctcccgagtagctgggattacaggcatgcgccaccatgctcagttagttttcgcatttt i rheMac3.chr19 I 34 C 0 s papAnu2.chr19 47139957 162 + 51301725 tttttgagacggagtctcgctctgccgcccaggccggagtgcagtggcgcgatctcagctcactgcaaccttcgcctcctgggttcaagcaattctcctatctcagcctcccgagtagctgggattacaggcacgcgccaccatgctc----agtttttgtatttt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=92837.000000 s hg38.chr19_GL949748v2_alt 144064 130 + 1064304 tggtagagacgggggtttcaccatgttggtcaggctggtctcgaattcttgac-----------------ctcaggtgatccacccacctcggcctcccaaactgttgggattacaggcgtgagccaccgcgccaggcccagccgtg s panTro4.chr19 59078225 130 + 63644993 tagtagagacgggggtttcaccatgttggtcaggctggtctcgaattcttgac-----------------ctcaggtgatccacccacctcggcctcccaaactgttgggattacaggcgtgagccaccgcgcccggcccagccgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102720599 130 - 106955855 tagtagagacgaggatttcaccatgttggtcaggctggtctcgaactcctgac-----------------ctcgggtgatccactcacctcggcctcccaaattgttgggattacaggtgtgagccaccgcgcccggcTCAGCGGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011216 124 + 64156825 tagtagagacg-gggtttcaccatattggtcaggctggcctcgaactcctgatnnnnnnnnnnnnnnnnn----------------------gcctcccaaactgttgggattacaggcgtgagccgccgcgcccggcccagccgtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140119 129 + 51301725 tagtagagatg-gggtttcaccatattggtcaggctggcctcgaactcctgat-----------------ctccggtgatccacccacctaggcctcccaaactgttgggattacagacgtgagccgccgCGCGCGGCCCAGCCGTG i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=44845.000000 s hg38.chr19_GL949748v2_alt 144194 54 + 1064304 cctttctcagaccc--aagagtccagacccccagcccctc----------------------------ctccctcagacccaaa s panTro4.chr19 59078355 54 + 63644993 cctttctcagaccc--aagagtccagacccccagcccctc----------------------------ctccctcagacccaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102720729 54 - 106955855 CCTTTCTCAGACCC--AAGagtccagacccccagcccctc----------------------------ctccctcatacccaga i nomLeu3.chr10 C 0 I 273 s rheMac3.chr19 60011340 82 + 64156825 cctttctcagaccc--aagagtccaggccctgagcccctcctccttcagacccagatcccagtcccttctccctcagatccagA i rheMac3.chr19 C 0 I 56 s papAnu2.chr19 47140248 54 + 51301725 CCTTTCTCAGACCC--AAGAGTCCAGGCCCCGAGCCcgtc----------------------------ctccctcagacccaga i papAnu2.chr19 C 0 I 64 s mm10.chr7 3675249 53 + 145441459 CTTCTCTCTGATTCAGAAGGGTTCAGGCACTAG--TCTTC----------------------------ATCCTTCAGACCAGG- i mm10.chr7 I 114 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=2928.000000 s hg38.chr19_GL949748v2_alt 144248 8 + 1064304 aatccagg s rheMac3.chr19 60011478 8 + 64156825 aatccagg i rheMac3.chr19 I 56 C 0 s papAnu2.chr19 47140366 8 + 51301725 aatccagg i papAnu2.chr19 I 64 C 0 s mm10.chr7 3675302 8 + 145441459 GCTGCAGG i mm10.chr7 C 0 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e nomLeu3.chr10 102720783 273 - 106955855 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e panTro4.chr19 59078409 0 + 63644993 C a score=6146.000000 s hg38.chr19_GL949748v2_alt 144256 13 + 1064304 cccaagcc---cctcc s nomLeu3.chr10 102721056 13 - 106955855 tcccagcc---cctcc i nomLeu3.chr10 I 273 C 0 s rheMac3.chr19 60011486 13 + 64156825 cccaagcc---cctcc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140374 13 + 51301725 cccaagcc---cctcc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675310 12 + 145441459 ----AACCAGACCTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e panTro4.chr19 59078409 0 + 63644993 C a score=487538.000000 s hg38.chr19_GL949748v2_alt 144269 412 + 1064304 tccctcaaacccaggagtcc---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGGACAC--CACCCAAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATCGGTCCGTCTTAGTTCCAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagacacaatccaacagtagaatggagaagtaaattgtggcc---tatacataagatagaatactctgtagcaataaaaaagaaACC-------Agct----gg-gt-----acagtggctcaggc s panTro4.chr19 59078409 390 + 63644993 -------------------------tcccagcccctcctccctcagacccaggAG-------TCCAGGCCCTGCCCCCAGGACAC--CACCCAAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCTTAGTTCCAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagacacaatccaacagtagaatggagaagtaaattgtggcc---tatacataagatagaatactctgtagcaataaaaaagaaACC-------Agct----gg-gt-----acagtggctcaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721069 412 - 106955855 tccctcagacccaggagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGGACAC--CACCCGAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGAAAGCCTTCCTTTGTTTTCTCCTTGGATCTCCGAAGTAGCCGCACCCATTGGTCCGTCCTAGTTCTAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagaaacaacccaacagtagaatggagaagtaaattgtagcc---tatacataagatagaatactctgtagcaataaaaaataaacC-------ggct----gg-gt-----acagtggctcaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011499 413 + 64156825 cccctcagacccagaagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGCACAT--CACCCGAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCATGACCAGGGCTGCAGGCTTTGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCCTAGTTCCAGAGCCATAGATCACCTGGTCC---CTGGCATTTCTTTGCCTGGGAGGGAAAG------AGG--------CAGAAAATGAGGGGTTTTGCagccccagactgggaaccatccgaatgtagaaacaacccaaaagtagaacggagaagtaaattgtggcc---tatacataagatagaatactctgtggcaataaaaaagaaACC-------AGTTggccgg-gc-----gcggtggctcacgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140387 409 + 51301725 tccctcagacccagaagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgcCCCCAGGACAT--CACCCGAACCCCACCGTACCCCCGATCCTCTTCAGTGTCCATGACCAGGGCTGCAGGCTTTGCAAGCcttcctttgttttctccttGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCCTAGTTCCAGAGCCATAGATCACCTGGTCC---CTGGCATTTCTTTGCCTGGGAGGGAAAG------AGG--------CAGAAGATGAGGGGTTTTGCAGCCCCAGACTGGGAACCATCCGAatgtagaaacaacccaaaagcAGAACGGAGAAGTAAATTGTGGCC---TATACATAAGATGGAATACTCTgtggcaataaaaaagaaacc-------agtt----ga-gt-----gcggtggctcacgc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675322 438 + 145441459 TCCCAAAGGCCCAGGGGATA---ATTGCCACTCCCCTCTCTGTCAGACCCAGGAAACCACACTCCAGCCTCAGACCCCAGGCCTCTTCCTCTAAAGCCCAGCACACCCCCAATTTTCTTCAGCGTCCATGCCCAGGGCTGTATAGTTTGAAAGCCTTCTTTCATTTTTCCCTTGGTCCGGGAAAGCTGTCGGGTCCAGTAGGCAGCCCTGGATTCAGAGCCAGAAGCCAGCTGCCCT---GTAGCCTGGCTCTTCCTAGAAAGAGAGC------AGAGTCAGCGTCAGAAAATGAAGGGTTTGGAACctacaaactgggaaccacccaaagacagaaacaacacga---tgtaacgaggacaggcatcgtggtactgtatccataaactggaatactctttagcaattaaaaaggaaCCAAATCTGagct----gg-gtggtgggggggggggcacac i mm10.chr7 C 0 C 0 s canFam3.chr1 19634241 401 - 122678785 TCCCTCAGACCTGGGAGTCCTGATTCCCCAGCCCCTCCTCCCTCAGACCCAGGAA-------T----------------GGGGCC--AGCCTCAACCCCACCGCACCCCCAATTCTCTTCAGTGTCCACGCCCAGGGTTGCAAGGTGTGCAGGCCTTCCTTCGTCTTCTCCTTCATCCTCCGGAACTTCAGGGCGCAATTTGAGGCTCTGGAACCCGATCCCTGAGCCACTTGGTCC---CTGGTATGGCTCTTCCTGGTAGGGAAACATTCAGAGA--------CAGAATAGGAAGGACCTGGCAGCTCCC-AGTGGACACC-CCCAAGTGGAGAAACAACACAACAGCAGGAGCGGGAAGTAAATTGCAATA---TATCGATAACTCGGAATCCTCTACAGCAATAGGAAGAGACAC-------AGCT----AATGC-----ATAGAAGGCCAGGC i canFam3.chr1 I 8 I 1202 e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=159092.000000 s hg38.chr19_GL949748v2_alt 144681 186 + 1064304 ctgtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaacatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaa------------------------------------------------t----tagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgagaggctgaggcaggaaaatt s panTro4.chr19 59078799 187 + 63644993 ctgtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaacatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaa-----------------------------------------------at----tagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgagaggctgaggcaggaaaatt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721481 234 - 106955855 ctgtaatcccagcactttgggaggctgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaaaatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaaaaaacaaaaaaaaagctgggcctggtggcgggtgcctgtaatcccaaaa----aagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgggaggctgaggcaagagaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011912 177 + 64156825 ctgtaatccgagcactttcggaggccaaggtgggcggatcatctgaggccag---------------gggttcgagaccagcctgaccaacatggtgaaatcctccctc-------------tacaaaaaaaaaaaaaaat------------------------------------------------g----taactgggcctggtgg------------tggtcgcctgtaatcccagctactggggaggctgaggcaggaggatc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140796 190 + 51301725 ctgtaatcccagcactttgggaggccaaggtgggtggatcatctgaggtcag---------------gggttcgagaccagcctgaccaacatggtgaaatcctgcctct----actaaaaatacaaaaaaaaaaaaaaat------------------------------------------------atatttagctgggcctggtgg------------tgggcgcctgtaatcccagctactggggaggctgaggcaggagaatc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675760 233 + 145441459 ctttaatcccagcac-ttgggaggcagatgcaggtggatt-tctgaggccagcctggtctacagactgagttccaatacagccagagctacacagaaaaaccctgtctcgaaaaaccaaaaAAAAAAAAAAAAAAAAAAAGGAGCCAGACATAAAATAATGAT--------------------------G----GAGCCATGTCTAGTAGTATATgcatgcttgtatgcttgtaatcccaac----agtgaggttgaggcagtggaatt i mm10.chr7 C 0 C 0 e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=2100.000000 s hg38.chr19_GL949748v2_alt 144867 1 + 1064304 g s panTro4.chr19 59078986 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721715 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012089 1 + 64156825 g i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140986 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844317 1 + 50890351 g i chlSab2.chr6 I 58 C 0 s mm10.chr7 3675993 1 + 145441459 g i mm10.chr7 C 0 I 558 e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=309972.000000 s hg38.chr19_GL949748v2_alt 144868 279 + 1064304 cttgaacctgggaggtggaggttgcagtgagctgagatggcgccattgcattccagcctgggtgacggagtgagattccaagaaaggaaagaaagaaagaaaagaaagaaacctaatgctaggcagaagaagccagcacaaaagactgaagactgtatgattctatttgcacaacgttgcagagcac--agcttgcaaagctctacagaaaAGcaggaggctggagtgggaggatcgcttgagcccaggtgtcggaggctgcagtgagctgagactgcacc s panTro4.chr19 59078987 279 + 63644993 cttgaacctgggaggcggaggttgcagtgagctgagatggcgccattgcattccagcctgggtgacggagtgagattccaagaaaggaaagaaagaaagaaaagaaagaaacctaatgctaggcagaagaagccagcacaaaagactgaagactgtatgattctatttgcacaaagttgcagagcac--agcttgcaaagctctacagaaaAGcaggaggctggagtaggaggatcgcttgagcctaggtgtcggaggctgcagtgagctgagactgcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721716 266 - 106955855 cttgaacctgggaggcggaggttgcagtgagctgagatggcgccattgcactccagcctgggtgacagagtgagattcc-------------aaggaagaaaagaaagaaaCCtaatgctaggcagaagatgccagcacaaaagactgaagactgtatgattctatttgcataaagttgcagagcac--agctagcaaagctctacagaaaAGcaggaggctggggtgggagaatcgcttgagcccaggtgtcggaggctgcagtgagctgagatcgcacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012090 278 + 64156825 cttgaacctgggagacagaggttgcagtgagctgagatggcaccattgcgctccagcctgggtgacagaatgagattccttctcagaaa---aaagaaagaaagaaggaaaCCTAATGTCAGGCAGAAGAAAACAGCAGAGAAGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAGCACAGAGCTGGCAAAGCTACACAGAAAAGcgggaggctggagtgggagaatcgcttgagcccaggtgtcggaggctgcagtgagctgagatcacacc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140987 262 + 51301725 cttgaacctgggagacagaggttgcagtgagctgagattgcaccactgccctccagcctgggtgacagaatgagattccttctcag-aa---aaagaaagaaagaaggaaacctaatgccaggcagaag-aaacagcacaG-AGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAACACAGAGCTGGC-------------AAAGCAGGAGGCTGGagttggagaatcgcttgagcccaggtgtcagaggctgcagtgagctgagatcacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844318 278 + 50890351 cttgaacctgggagacagaggttgcagtgagctaagatggcaccattgcactccagcctgggtgacagaatgagattccttctcagaaa---aaagaaagaaagaaggaaGCCTAATGCTAGGCAGAAGAAAACAGCACAGAAGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAGCACAGAGCTGGCAAAGCTACACAGAAAAGcgggaggctggagtgggagaatcgcttgagcccaggtgttggaggctgcagtgagctgagatcacaca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=46599.000000 s hg38.chr19_GL949748v2_alt 145147 23 + 1064304 actgcactccagcctgggcatca s panTro4.chr19 59079266 23 + 63644993 actgcactccagcctgggcatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955535 23 + 60714840 actgcactccagcctgggcatca i ponAbe2.chr19 M 804 C 0 s nomLeu3.chr10 102721982 23 - 106955855 actgcactccagcctgggcatca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012368 23 + 64156825 actgcactccagcctgggcatca i rheMac3.chr19 C 0 I 319 s papAnu2.chr19 47141249 23 + 51301725 actgcactccagcctgggcatca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844596 23 + 50890351 actgcactccagcctgggcatca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=8024.000000 s hg38.chr19_GL949748v2_alt 145170 17 + 1064304 gagcaagactctgtcaa s panTro4.chr19 59079289 17 + 63644993 gagtaagactctgtcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955558 17 + 60714840 gagcaagactctgccaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722005 4 - 106955855 gagc------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47141272 17 + 51301725 cagcgagactctgtctc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46844619 17 + 50890351 cagcgagactctgtctc i chlSab2.chr6 C 0 I 1 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60012391 319 + 64156825 I a score=32557.000000 s hg38.chr19_GL949748v2_alt 145187 29 + 1064304 aaaaaaaaaaaaaaa--------GGTTAGGGAGAAGA s panTro4.chr19 59079306 32 + 63644993 aaaaaaaaaaaaaaa-----aaaGGTTAGGGAGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955575 37 + 60714840 aaaaaaaaaaaaaaaaaaaaaaaGGTTAGGGAGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722009 19 - 106955855 ----------aaaaA--------GGTTAGGGAGAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012710 28 + 64156825 AAAAAAAAAAAAAAA--------GGTT-GGGGGAGAA i rheMac3.chr19 I 319 C 0 s papAnu2.chr19 47141290 28 + 51301725 aaaaaaaaaaaaaaa--------ggtt-gggggagAA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46844637 28 + 50890351 aaaaaaaaaaaaaaa--------GGTT-GGGGGAGAA i chlSab2.chr6 I 1 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=611756.000000 s hg38.chr19_GL949748v2_alt 145216 318 + 1064304 GGTTACCTTGTATTTGTGAGGAAAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCCGTGTCACTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGAATAcagccatccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatctgtagatgcccaaattccttatataaaacggtatagtatttgcatacaggctacacacatcctcctgt-gtTTGTTTTATT-TTATTTTAAttt-----ttatctgattttt-acagacaaatgtctcgttttgttgtccaggctggagtgc s panTro4.chr19 59079338 322 + 63644993 GGTTACCTTGTATTTGTGAGGAAAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCCGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGGATAcagccgtccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatctgtagatgcccaaattccttatataaaatggta-agtatttgcgtacaggctatacacatcctcctgt-gtttgttttatt-ttattttattttattttTTATCTGAttttt-atagacaagtgtctcgttttgttgtccaggctggagtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955612 309 + 60714840 GGTTACCTTGTACTTGTGAGGAAAAAGCGGGTGTCAGGGGAGGGACACACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGAATAcagccgtccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatatgtagatgcccaaatttcttatataaaacggtatagtatttgcatacaggctacacacatcctcctgt-Gtttattttatt-ttat-------------ttatctgattttt-atagac-agtgtctcattttgttgtccaggctggagtgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722028 312 - 106955855 GGTTACCTTGTCCTTGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACACACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGCAGTTTATCTGGGCTCTCACTTTATGAATAcagccgtccctcagtatccat-gggggttggttcaaggactccctaagaatactgaaatctgtagatgcccaaattccttatataaaacggtacactatatgcatacaggctacacacatcctcctgt-gtttattttaTT-TTAATTT----------TTATCTGATTTTT-ATAGAC-AGTGTCTCGTTTTGTTGTCCAGACTGGTATGC i nomLeu3.chr10 C 0 M 1089 s rheMac3.chr19 60012738 318 + 64156825 GGTTACCATCTCCTCGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATAAATAcagtcgtccctcagtatccat-gggagttggttcaaggactccccaaggataccgaaatctgta-atatccaaattctgtatataaaatggcatagtatttgcatacaggctacacatactcttctgtggttttttaaatt-ttattttatttt-----ttatctgatttttcagagac-agcgtctcgttttgttgtccaggctggagtgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141318 318 + 51301725 GGTTACCATCTCCTCGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTGTCGcttgccctggctggagtttATCTGGGCTCTCACTTTATAAATACAGtcgtccctcagtatccat-gggggttGGTTCAAGGACTCCCCAAGGATACCGAAATCTGTA-ATGCCCaaattctgtatataaaatggcatagtatttgcatacaaGCTACACATATCCTTCTgtggtgttttaaatt-ttattttatttt-----ttatctgatttttcAGAGAC-AGCGTCttgttttgttgtccaggctggagtgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844665 318 + 50890351 GGTTACAATCTCCTCGTGAGGAGAAAGGGGGTATCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTATCGCTTGCCCTAGCTGGAGTTTATCTGGGCTTTCACTTTATAAATAcagttgtccctcagtatccat-gggggttggttcaaggactccccaaggatactgaaatctgta-atatccaaattctgtatataaaatggcatagtatttgcatacaggctacacatatccttctgtggttttttccatt-ttattttatttt-----ttatctgatttttcagagac-agcgtctcgttttggtgtccaggctggagtgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45426167 300 + 49145316 GGTTACCTTGTCCTTGTGAGGAT-GAGGGGACATCAGAGGATGGGCATGCAAGGTGCTGTCACGCCGTGT--CCTGCCCTAGCTGGAGTTTACCTGGGTTCTCATTTTATGAATGcacttgtacctcattatccatggggggttagttcacgatctccc-aagaatactgaaatctgta-atgcccaaattccttatgtaaaacagtacagtattggcatctgcaatacacacatcctcctgt-atTATTACCATTATTAT-------------TAGTAgtattttttaaagac-agggtttcatgatgttggtcaggct------- i calJac3.chr22 I 1379 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e macFas5.chr19 55029692 9250 + 59248254 I a score=154766.000000 s hg38.chr19_GL949748v2_alt 145534 110 + 1064304 ggtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccacgacacccagcc s panTro4.chr19 59079660 110 + 63644993 agtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccactacacccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955921 110 + 60714840 agtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccactacactcagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013056 110 + 64156825 agtggtgcagtcgtagctcaatgcagcctcaaatttctgggctccagcaattctcctgcctcagtctcccaaagtgctggggctacaggtgtgggccactacacccagag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141636 110 + 51301725 agtggtgcagtcatagctcaatgcagcctcaaatttccaggctccagcaattctcccgcctcagtctcccaaagtgctggggctacaggtgtgggccactacaCCCAGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844983 110 + 50890351 agtggtgcaatcatagctcaatgcagcctcaaatttccaggctccagcaattctcccgcctcagtctccccaagtgctggggctacaggtgtgggcccctacacccagcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45426467 85 + 49145316 ---------------gct---------cttgagctctagacctcaggtgatccacccgccttggcct-ctaaagggcttggattacaggcgtgagccaccacgcccggtc i calJac3.chr22 C 0 I 949 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=131476.000000 s hg38.chr19_GL949748v2_alt 145644 111 + 1064304 ctccaatgcactttaaatcacctctagattacttataacacccggtacaaggtaaatgttatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT s panTro4.chr19 59079770 111 + 63644993 ctccaatgcactttaaatcacctctagattacttataacaccttgtacaaggtaaatgttatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956031 111 + 60714840 ctccaatgcactttaaatcatctctagattacttataacaccttgtacaaggtaaacattatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013166 108 + 64156825 ctccaatgcactttcaatcacctctagattacttacaatacctcatacaagat-aatgttatatagatagctgttCTTTTAatttgtat--ttttttgtcatattgttact i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141746 108 + 51301725 CTCCAATGCACTTTcaatcacctctagattacttacaatacctcaTACAAGAT-AATGTTATATAGATAGCtgttcttttaatttgtat--ttttttgtcatattgttact i papAnu2.chr19 C 0 I 328 s chlSab2.chr6 46845093 109 + 50890351 ctccagtgcactttcaatcacctctagattacttacaatacctcatacaagataaatgttagatagatagctgttCTTTTAATTTGTAT--ttttttgtcatattgttact i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=90.000000 s hg38.chr19_GL949748v2_alt 145755 1 + 1064304 T s panTro4.chr19 59079881 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956142 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013274 1 + 64156825 t i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 46845202 1 + 50890351 t i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e papAnu2.chr19 47141854 328 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I a score=1365.000000 s hg38.chr19_GL949748v2_alt 145756 1 + 1064304 T s panTro4.chr19 59079882 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956143 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013275 1 + 64156825 t i rheMac3.chr19 C 0 I 486 s papAnu2.chr19 47142182 1 + 51301725 t i papAnu2.chr19 I 328 C 0 s chlSab2.chr6 46845203 1 + 50890351 t i chlSab2.chr6 C 0 I 489 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=57492.000000 s hg38.chr19_GL949748v2_alt 145757 119 + 1064304 GATTATTACTTTTAAAAAATagagatgggggtctcgctatgttactcaggccgcagtatagtggctatattcacaggcatgatcccactactgatcggcgtgggagtgttgaTACATTG s panTro4.chr19 59079883 119 + 63644993 GATTATTACTTTTAAAAAATagagatgggggtctcgctatgttactcaggctgcagtatagtggctatattcacaggcatgaacccgctactgatcagcatgggagtgttgaTACATTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956144 119 + 60714840 GATTATTACTTTTAAAAAATagagatgggggtcttgctatgttgctcaggctgcagtatagtggctatattcgcaggcatgatcccgctactgatcggcacgggagtgttgaTATATTG i ponAbe2.chr19 C 0 M 1290 s papAnu2.chr19 47142183 118 + 51301725 gattattacttttaaaagatacagat-ggggtctcgatatgttgctcaggctggagtatagtggctatATTCACAGGCACGATCCCGCCACTGATCAGCAGGGGAGTGGTGatatattg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e chlSab2.chr6 46845204 489 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60013276 486 + 64156825 I a score=7143.000000 s hg38.chr19_GL949748v2_alt 145876 120 + 1064304 TTATTTTTTATTGTTTTTT-Ccatatatatacacatatatataca--------------tatatatgtgtatatatatacacacatatgcatatatatacgcatatatgcgtatatatatacgcgtatatacgcg s panTro4.chr19 59080002 135 + 63644993 TTATTTTTTATTGTTTTTTTCcatatgtatacacatatatatacacacatatatatgtatatatatgtgtgtgtatatacacatatatgtgtatatatacgtatatatgcatatatatacacgtatatatgtgtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47142301 37 + 51301725 ttgttttttattgtttttt-ccatatatatac---------------------------tatata---------------------------------------------------------------------- i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e chlSab2.chr6 46845204 489 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60013276 486 + 64156825 I a score=7816.000000 s hg38.chr19_GL949748v2_alt 145996 10 + 1064304 tatatatata s panTro4.chr19 59080137 10 + 63644993 tatatatata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60013762 10 + 64156825 TATAtttata i rheMac3.chr19 I 486 C 0 s papAnu2.chr19 47142338 10 + 51301725 tatatttata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845693 10 + 50890351 tatatttata i chlSab2.chr6 I 489 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=337548.000000 s hg38.chr19_GL949748v2_alt 146006 290 + 1064304 tttgagatggagtcccgctctatcacccaggccggagtccaatggcacgatcttggctcactgcaacctctatctccctggttcaagcgattctcctgcttcagcctcccgagtagctgggattacaggcacccgccaccacacccagctaatg--tttgtatttttagtagagttggggttttgccatgttggccaggctggtcttgaactcctgaccacaggtgatccactcgcctgggcctcccaaagtgctgggattacaggtgtgagccactgcAATGGGCCCAtaa s panTro4.chr19 59080147 290 + 63644993 tttgagatggagtcccgctctatcacccaggccggagtgcaatggcacgatcttggttcactgcaacctctatctccctggttcaagcgattctcctgcttcagcctcccgagtagctgggattacaggcacccgccaccacacccagctaatg--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgacctcctgaccacaggtgatccactcgcctgggcctcccaaagtgctgggattacaggtgtgagccactgcaacgggccCAtaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60013772 290 + 64156825 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatattggctcactgcaacctgcatctctgtggttcaagcaattctcctgcctcagcctaccgagtagctgggattacaggcacatgccaccacacccagctaatt--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgcctcggcctcctaaagtgctgggattacaggtgtgagccaccgcgccgggccCACaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142348 290 + 51301725 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatattggctcactgcaacctgtatcTCTgtggttaaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacatgccaccacacccagctaatt--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgcctcggcctcctaaagtgctgggattacaggtgtgagccactgcgccgggcccaCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845703 290 + 50890351 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatctcggctcactgtgacctgtatgtccgtggttcaagccattctcctgcctcagcctcccgagtagctgggattacaggcacatgctaccacatgcagctaatt--tttgtatttttagtagagttggggtttcgccatgttcgccaggctggtctcgaactcctgacctcaggtgatccattcgcctcggcctcctaaagtgctgggattacaggtgtgagccaccgcgctgggccCACaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427501 292 + 49145316 ttagagacagagtctaattttgttgcctaggctggagtgcaatggagcaatctctgctcactgtgacctccgcctcccaggttcaagggattctccttcctcagcctcccgagtagctgggactacaggtgtgcgccaccacacccggctaatttatttgtatttttagcagagaaggagtttcaccatgttagccaggatgggctcgagctcctgagctcaggtgatccacttgccttgccctcccaaagtgctaacattgcaggcaggagccaccgcgccaggccCATAA i calJac3.chr22 I 949 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=216340.000000 s hg38.chr19_GL949748v2_alt 146296 199 + 1064304 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcaaattatgcagTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTGGAAGAGGAGGCAAAGATGAAGGAAGGTATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGgacacacacacagagagaaactgag--gcagagacagG s panTro4.chr19 59080437 199 + 63644993 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcaaattatgcagTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTGGAAGAGGAGGCAAAGATGAAGGAAGGTATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGGACACACACACACAGAGAAACTGAG--GCAGAGACAGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60014062 193 + 64156825 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcgaattatACCGTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACGTAAAGCAGAG------AAATATTA-ACAGATTTTGG--ACACACACAGAGAAAAACTGAGAGGCAGAGACAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142638 197 + 51301725 TCATTTTTGAAGGAGGGCACCTGCATTTTCATTGTTCACCAGGCCCTGCGAATTATACCGTGagaatgggaaaagaaagaagttaaagtGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACATAAagcagagagaaataaatatta-acagattttgg----acacacagagaaaaactgagaggcagagacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845993 199 + 50890351 tcatttttgaaggagggcacctgcattttcattgttcaccgggccctgcgaattatACCGTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGG--ACACATGCAGAGAAAAACTGAGAAGCAGAGACAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427793 173 + 49145316 TCATTTTTGAATGAGGACACCTGCATTCTCATTGTTCACCAGGTGCTGCAAAGCAGGCAGTGGG--------------------AAAGAGAGAGCGGCTTTGAAGAAGTGGGGAAGGTGAAGG----CATAAAGCAGAGACAAATAAATA--A-GCAGATTTCAG--ACATGCACAGGGAGAAACTGAGAAGCAGAGGCAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19635844 158 - 122678785 TCAGTCTTGCCGGAGCTGTCCAGAATGTTCGTTGTTCAGCA-GCCGTGCACATCTTGT----AGCCCGGGAAGGGAAAGAAG--GAAGAGGGACAAACTTCGGAAAACA---------GAAGG-----CCACAACAG--------AAACACTACACAGATTCCAG------GCACAGGGAGAAG--GAG--CCAGAG----- i canFam3.chr1 I 1202 C 0 e mm10.chr7 3675994 558 + 145441459 I e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=399714.000000 s hg38.chr19_GL949748v2_alt 146495 242 + 1064304 ATTGGTGGAGACCAGGGAGACGG----CAAATCCCAGAGA----GAAGAGA-CCCCAGAGCCA-----TCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGAGTCCAGGGTATGGGAGAAGGGCCCGGTCCGGGCTGTGCGGGTCCCAGCTG s panTro4.chr19 59080636 242 + 63644993 ATTGGTGGAGACCAGGGAGATGG----CAAATCCCAGAGA----GAAGAGA-CCCCAGAGCCA-----CCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGAGTCCAAGGTATGGGAGAAGGGCCCGGTCCGGGCTGTGCGGGTCCCAGCGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723443 242 - 106955855 ATTGGTGGAGACCAGGGAGACGG----CAAATCCCAGAGA----GAAGGGA-CCCCAGAGCCA-----CCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGAGAAAAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCAGCAGAGGACAGAGGGAGGAGACTGTGTCCAAGGTATGGGAGAAGGGCCCAGTCCGGGCTGTGCGGGTCCCAGCTG i nomLeu3.chr10 M 1089 C 0 s rheMac3.chr19 60014255 244 + 64156825 ATTGGAGGAGACCAGGGAGATGG----CGAATCCCAGAGACAGGGAAGAGA-TCCCGGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGAC--GGGAAAAAAAGAAACCAAGAGAGGCAGCTCTGAGTGAGGCAGAGAGAGGCCCCAGCAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGCGTCCAAGGTATGGGAGAAGCGCCTGGTCCAGGCTGTGCGGGTCCCAGCCG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142835 246 + 51301725 attgGAGGAGACCAGGGGGACGG----CGAATcccagagacagagaagaga-tcCCGGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGacgaggggaaaaaagaaaccaagagagGCAGCTCTGAGCGAGGCAGAGAGAGGCCCCAGCAGCCAGGAGCGGCAGAGGACAGACGGAGGAGACCGCGTCCAAGGTATGGGAGAAGGGCCCGGTCCAGGCTGTGCGGGTCCCAGCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846192 245 + 50890351 ATTGGAGGAGACCAGGGAGACGG----CGAATCCCAGAGACAGCGAAGAGA-TCCCAGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGAC-AGGGGAAAAAAGAAACCAAGAGAGGCAGCTCTGAGCGAAGCAGAGAGAGGCCCCAGAAGCCAGAAGCGGCAGAGGACAGAGGGAGGAGACCTCGTCCAAGGTATGGGAGAAGGGCCCGGTCCAGGCTGTGCAGGTCCCAGCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427966 241 + 49145316 ACTGGA-GAGACATGGGTGACAG----TGAATCCCAGAGA----GAGAGGA-CCCCAGAGTCA-----CCGAAAGGAAGTACTCATTCGGAATC--TGAAGCAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGGGGCAGCTCTGTCCGGGGCAGACAGAGGCCCCAGAAACCAGGAGCCGCAGAGAACAGAGGGAAGAGACAGGGTCCGAGGTGTGGGAGAAGCGCACAACCTGGGCTGGATGGGTCCCAGCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19636002 166 - 122678785 ------------CAGAGAGCCAGCACACGAACCCGGGCGA----CAGGAGAGTTCTGGAGCCAGGAGCCAGGGAGGCAGGAGGC-CTgggagtcagagaagcagagacacaggcacagggaaagaagg---caagagaagca-----gggagaggctgagggagg-----------------aggagaggACACACGCTGG--------------------------------------------------CAAGCCG i canFam3.chr1 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e ponAbe2.chr19 55956263 1290 + 60714840 M e macFas5.chr19 55029692 9250 + 59248254 I a score=329303.000000 s hg38.chr19_GL949748v2_alt 146737 126 + 1064304 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGACTTCTGTGAAGGCCTTTctgctccttcctccat---cc s panTro4.chr19 59080878 126 + 63644993 GAGGTGGAGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCCTTTCTGCTCCTTCCTCCAT---CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723685 126 - 106955855 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGACTTCTGTGAAGGCCTTTctgctccttcctccat---cc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014499 126 + 64156825 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGCCTGGGTGACTTCGGTGAAGGCCTTTCTGCTCCTTCCTCCAG---CC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47143081 129 + 51301725 TAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCCTTTCTGctccttcctccagcctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846437 129 + 50890351 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCTTTTctgctccttcctccagcctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45428207 126 + 49145316 GAGGTGGCGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGGCTTCTGCAAAGGCCTGCCTGCTCCTTCCTCCAT---CC i calJac3.chr22 C 0 M 1419 s mm10.chr7 3676552 113 + 145441459 GAGGTG----CTCACCTGTGTGCCCGCCTTGCCTGCATAGGCCAGGGAAGTTCCCGGGAAGGGTGAG---------ATTCCATTTGTGCAGTTTCTGCAAAGGCCTGAAGGCTCCTTCCTCCTT---CA i mm10.chr7 I 558 C 0 s canFam3.chr1 19636168 125 - 122678785 -GAGCGGAGCCTCACCTGTGTGTCCGGCGGGCCTGCATGGGCCATGGCAGCTCCCGGGAGGGGACGGGCTCCTCCAGCTCCTGCTGGGCGGCTTCTGCCATGGTCTGGAGTCTCCTCTCTCCAT---CT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e macFas5.chr19 55029692 9250 + 59248254 I a score=272175.000000 s hg38.chr19_GL949748v2_alt 146863 127 + 1064304 tcctcctcctcct---ccAGCGCCCCCCAAGGCAGCACCCCAGGGTCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAAGACAGCGATGGGCCTGGGGAGGA-GCAG--GGGGCTGGGA s panTro4.chr19 59081004 127 + 63644993 TCCTCCTCCTCCT---CCAGCGCCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGACAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723811 130 - 106955855 tcctcctcctcctccgccAGCGCCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTCGGCAGCTCGTTCAGCACAGAGGACAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014625 127 + 64156825 TCCTCCTCCTCCT---CCGGCACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGATAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47143210 127 + 51301725 tcctcctcctcct---ccggcACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGACAGCGAtgggcctggggaggg-gcag--ggggctGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846566 127 + 50890351 tcctcctcctcct---ccGGCACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGTCAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3676665 127 + 145441459 TCATCATCTTCAT---CCAGTGTTCCCCAAGGGAGCACACCAGGGCCGCGGTATCGCAGCGTAGCAGCGCTGGGGAGATCGTTCAGCACAGACGCCAGCGATGGGCCTGGGATGAACACAA--AGGATTGAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636293 129 - 122678785 TCTTCCTCCTCCT---CCGATGCCCCCCACGGAAGAACCCCAGGGCCCCGGTACCGAAGGGTTGCAGCACTGGGGAGCTCATTCAGCACAGAGGAGAGCGATGGGCCTGGGGTGGA-AAAGAAGGGGCTGGGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45428333 1419 + 49145316 M e macFas5.chr19 55029692 9250 + 59248254 I a score=112897.000000 s hg38.chr19_GL949748v2_alt 146990 63 + 1064304 ----------------------------agacccgggagtctggg-ccctaattcctcctccctcaga-ccaggaaaccagg-tccccggcccc s panTro4.chr19 59081131 63 + 63644993 ----------------------------agacccgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cccccggcccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723941 56 - 106955855 ----------------------------agacctgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cccc------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014752 62 + 64156825 ----------------------------agacccgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cctcag-tccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55038942 65 + 59248254 ----------------------------agacccaggagtccaggcccccagcccctcctccctcagacccaggagtccagacccccag-cccc i macFas5.chr19 I 9250 C 0 s papAnu2.chr19 47143337 63 + 51301725 ----------------------------AGACCTGGGAGTCTGGG-CCCAaattcctcctccctcaga-ctaGGAAACCAGG-CCTcagtcccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846693 63 + 50890351 ----------------------------AGACCCGGGAGTCTGGG-cccaaattcctcctccctcaga-ccaggaaaccagg-cctcagtcccc i chlSab2.chr6 C 0 C 0 s mm10.chr7 3676792 58 + 145441459 ----------------------------AGACAGAGGAGTCCAGG-CCACAAGCCTTTC-CCCTCAGA-TCCACAGTCCAGG-CCACAGC---- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636422 89 - 122678785 GGGCGCGGGAGTCCCAGCCTCCTCCCTCAGACC-AGGAGCCCAGG-CCCCTGCTCCTCCTCCCTCAGA-CCAGGAGCCCAGG-CCCCTGCTCC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45428333 1419 + 49145316 M a score=117337.000000 s hg38.chr19_GL949748v2_alt 147053 52 + 1064304 tcctccctcagacccaggagtccaggcccccggc----tcctcctccctcagaccc s panTro4.chr19 59081194 52 + 63644993 tcctccctcagacccaggagtctaggcccccgac----ccctcctccctcagaccc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60014814 51 + 64156825 tcctccctcagacccaggagtccaggcctccag-----ccctcctccctcagaccc i rheMac3.chr19 C 0 I 637 s macFas5.chr19 55039007 52 + 59248254 tcctccctcagacccaggagtccagacccccagc----ccctcctccctcagaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143400 55 + 51301725 tcctccctcagacccaggagtccaggcc-ccagcccttccctcttccctcagaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846756 52 + 50890351 tcctccctcagacccaggagtccaggcccccggc----ccctcctccctcggaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429752 51 + 49145316 tcctccctcaga-ccagaaaaccaggccccaggc----ccctcctccctcggaccc i calJac3.chr22 M 1419 C 0 s mm10.chr7 3676850 50 + 145441459 CCATCTCTCAGACACAAGGGTGCAGGGTTCAGGC------CACCTCCCTCAGACCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19636511 49 - 122678785 TCCTCCCTCAGA-CCAGGAGTCCAGGCC-CCTGC----TCCTCCTCCCTCAGACC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102723997 0 - 106955855 C a score=89712.000000 s hg38.chr19_GL949748v2_alt 147105 42 + 1064304 aggagtccaggcccccggctcctcctccctcagacccaggag s panTro4.chr19 59081246 42 + 63644993 agaagtccaggctctcggcccctcctccctcagacccagcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723997 27 - 106955855 ---------------cggcccctcctccctcagacccaggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039059 41 + 59248254 aggagtccagg-ccccggcccctcctccctcagacccaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143455 41 + 51301725 aggagtccaga-ccccagcccctcctccctcagacccaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846808 42 + 50890351 aggagtccaggcccccggcccctcctccctcggacccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429803 41 + 49145316 aggagtccagg-ccccagcccctcctctctcggacccaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3676900 38 + 145441459 -TGGAGCCAGG-CCCCAG--ACTCTTTTTTCAGACCCAGGAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19636560 41 - 122678785 AGGACTCCAGG-CCCCTGCTCCTCCTCCCTCAGACCCAGGAG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e rheMac3.chr19 60014865 637 + 64156825 I a score=14022.000000 s hg38.chr19_GL949748v2_alt 147147 15 + 1064304 tccaggcccccggct s panTro4.chr19 59081288 15 + 63644993 aacaggcccccggcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102724024 15 - 106955855 tccaggcccccggcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039100 15 + 59248254 tccagatccccagac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846850 15 + 50890351 tccaggcccccggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429844 14 + 49145316 tccaggccccagcc- i calJac3.chr22 C 0 C 0 s mm10.chr7 3676938 12 + 145441459 CCCATGCCCCAA--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636601 14 - 122678785 TCCAGGCCCCTGCT- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e papAnu2.chr19 47143496 0 + 51301725 C e rheMac3.chr19 60014865 637 + 64156825 I a score=73582.000000 s hg38.chr19_GL949748v2_alt 147162 28 + 1064304 cctcctccctcagacccaggagaacagg s panTro4.chr19 59081303 28 + 63644993 cctcctccctcagacccagaagtccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957553 27 + 60714840 cctcctccctcaga-ccaggaaaccagg i ponAbe2.chr19 M 1290 C 0 s nomLeu3.chr10 102724039 28 - 106955855 cctcctccctcagacccaggagtccagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039115 28 + 59248254 cctcctccctcagacccaggagtccagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846865 28 + 50890351 cctcctccctcggacccaggagtccagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429858 28 + 49145316 cctcctccctcggacccaggagtccaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3676950 25 + 145441459 ---CCTTCTTCAGATACAGGGGTCTAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19636615 28 - 122678785 CCTCCTCCCTCAGACCCAGGAGCCCAGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C e rheMac3.chr19 60014865 637 + 64156825 I a score=40086.000000 s hg38.chr19_GL949748v2_alt 147190 14 + 1064304 cccccggcccctcc s panTro4.chr19 59081331 14 + 63644993 ctctcggcccctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957580 14 + 60714840 ccccagagccctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724067 14 - 106955855 cccccggcccctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015502 14 + 64156825 cccccggcccctcc i rheMac3.chr19 I 637 C 0 s macFas5.chr19 55039143 14 + 59248254 cccccagcccctcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846893 14 + 50890351 cccccggcccctcc i chlSab2.chr6 C 0 I 1683 s calJac3.chr22 45429886 14 + 49145316 cccccggcccctcc i calJac3.chr22 C 0 C 0 s mm10.chr7 3676975 12 + 145441459 -CCCCAGCCCATT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636643 13 - 122678785 -CCCCTGCTCCTCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=414808.000000 s hg38.chr19_GL949748v2_alt 147204 151 + 1064304 tccctcagacccaggagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-ctcctcctccctcagacccaggagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccggctcctcctcc s panTro4.chr19 59081345 151 + 63644993 tccctgagacccagcagaacaggcccccggcccctcctccctcagacccagaagtccaggctctcgg-cccctcctccctcagacccagcagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccggcccctcctcc i panTro4.chr19 C 0 I 478 s ponAbe2.chr19 55957594 150 + 60714840 tccctcagacccaggagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-cccctcctccctcagacccaggagtccaggccctcagctcctcctccctcagacccaggagtccagg-ccccagcccctccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724081 151 - 106955855 tccctcagacccatgagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccggccccctcctccctcagacccaggagtccaggctcccggcccctcctccctcaga-ccaggaaaccaggttcccggcccctcctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015516 150 + 64156825 tccctcagacccaggagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-cccctcctccctcagacccaggagtccagt-ccccggcccctcctccctcagacccgggagtccaggtacccagcccctcctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039157 150 + 59248254 tccctcagacccaggagtccaggcccccagcccctcctccctcagacccaggagtccagatccccag-accctcctccctcagacccaggagtccagg-ccccggcccctcctccctcagacccgggagtccaggtacccagctcctcctcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46848590 151 + 50890351 tccctcggccccaggagtccaggcccccggcccctcctccctcggacccaggagtccaggcccccgg-cccctcctccctcggacccaggagtccaggcccccggcccctcctccctcggacccaggagtccaggcccccggctcctcctcc i chlSab2.chr6 I 1683 C 0 s calJac3.chr22 45429900 146 + 49145316 tccctcagacccaggagttcagg--gacagcccctcctcccccagccccaggagtccagacccccgg-cccctcctccctcagacccaggagttcagg--cacagcccctcctccctgggacccaggagtccagg-ccccaggccctcctcc i calJac3.chr22 C 0 C 0 s mm10.chr7 3676987 106 + 145441459 TCTCTCAGACCCAGGGGTACAGGCCTAAAGCCA--CCCCCCTCAGACCCAGGAGTTCAGA--CTCGG-GTTCTC--CCCTCAGATCCAGGGCTATAGA--------------------------------------TCCCATTATTTCTCC- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636656 144 - 122678785 TCCCTCAGA-CCAGGAGTCCAGGCCCCCAGCCCCTC--CCCTCAGACGCAGGAGTCCAGGCCCCTG--CTCCTCCTCCCTCAGACCCAGGAGTCCAGG-CCCCTGCTCCTCCTCCCTCAGA-CCAGGAGTCCAGG-CCCCTGCTCCTCCTCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=31645.000000 s hg38.chr19_GL949748v2_alt 147355 14 + 1064304 ctcagacataggaa s panTro4.chr19 59081974 14 + 63644993 ctcagacataggaa i panTro4.chr19 I 478 C 0 s ponAbe2.chr19 55957744 14 + 60714840 ctcagacataggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724232 14 - 106955855 ctcagacccagtag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015666 14 + 64156825 ctcagagccaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039307 14 + 59248254 ctcagacccgggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46848741 14 + 50890351 cttggacccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430046 14 + 49145316 ctcagacccaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3677093 12 + 145441459 TTCACACTGGGG-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636800 14 - 122678785 CTCAGACCCAGGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=35449.000000 s hg38.chr19_GL949748v2_alt 147369 15 + 1064304 tccaggcacccagcc s panTro4.chr19 59081988 15 + 63644993 tccaggcacccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957758 15 + 60714840 tccaggcacgcagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724246 14 - 106955855 tccagac-cccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015680 15 + 64156825 tccaggtacccagct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039321 15 + 59248254 tccaggtacccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143496 14 + 51301725 tccaggc-ctcagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46848755 14 + 50890351 tccaggc-cccggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430060 13 + 49145316 ttcagg--cacagcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19636814 15 - 122678785 CTCAGGCCCCCAGCC i canFam3.chr1 C 0 I 878 e mm10.chr7 3677105 0 + 145441459 C a score=6465713.000000 s hg38.chr19_GL949748v2_alt 147384 1864 + 1064304 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtccgggtgccagcctctacttcccctggacccaggggtccacagccctcaactccatccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCATTC---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCC-AGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCCCAGGTA----AGGGAGGGGCCAGGGGCAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCCCG---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCGGGGGGG---CTGTACCTCACCCT------------------------GGGACTTGGTGGA-CTAAGTCCTTCCCACCGTTTATCA-CC--CAGATACCTGCACGGACAGGATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACACGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGCGCCAGGAGCGCTGGG-GTCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCACccgcacctcagtttcccctttgtgaaatgggaaGCTTATGCTTCCTTCCAAGTCTGCAATATTGGTGCGATGAGCTAAAAGTGGAGCGAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCTCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCTGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGGGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- s panTro4.chr19 59082003 1866 + 63644993 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtccgggtgccagcctctacttcccctggacccaggggtccacagccctcaactccgtccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTGGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTGCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCTGGGGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCCCAGGTA----AGGGAGGGGCCAGGG-CAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCCCG---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCGGGGGGGGGGCTGTACCTCACCCT------------------------GGGACTTGGTGGA-CTAAGTCCTTCCCACCGTTTATCA-CC--CAGATACCTGCACGGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACACGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGCGCCAGGAGCGCTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaagcttatgcttccttccaagtctgcaatatcggtgcaatgagctaaaagtggagcgAAAGACACAAGGAAGAGG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCTCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGCG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCTGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957773 1905 + 60714840 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtcccggtgccagcctctacttcccctggacccaggggtccacagccctcgactccgtccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACTCAGCCTCTCCTATTCCCCAGACACCCAAACTCCCAGCCCTTAGCCCTCCCCTCCTCCCAGACTAAACTCCCAGCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCCCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTG-AGACTCAGGAGGCCGGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCTTGAAGATCGGATGGATCTGAGCTTCTCCTGACAT-C---CTTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTAGGGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCCCAGGCAGGGCT------GTCTCTAGTGGCTA-CCAGGCGGACACTGCCCCAGGTA----AGGGAGGGGCCGGGG-CAGGTGTGTACCTGGCCGACAGGTGGCCCGG---AGGGAGTAAGGTACG---CTTCCTGTGGTTTCTCAGGGCCTCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGCTGCCCTG---GGCCTAACAGTTTGGCTCCTGG--GCTGAGCGGGGCAGGGGCTGTACCTCACCCT------------------------GGGACTTCGTGGGCCTAAGTCCTTCCCGCCGTTTATCCTCC--CAGATACCTGCACGGACACGCCGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCACAGGCCGAGCAATGAAAAGAGGGTGCCAGGAGCGCTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACAGCCGTCCCCAGGCCTGCGCATTCGCACCTCAGTTTCCCCTTTGTGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATTGGTGCGATGAGCTAAAAGTGGAGTGAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCAACCCCACATTGTGGATGCAAAGAAAGGGGATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCGCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCCCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAACCTGGTTCACAGAATTCCCAGG------------------A-----CCAGCTGGCAGAGGGGGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGAGCTAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCAGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGTCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCTCTCAGCAGCCAGGCACAGCGGGATCGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCATGCCAGTAGGCGCTCAGCAGCATGGTCCAGGTGCTCCT-GAGGAGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724260 1860 - 106955855 cctcctccctcagacccaggagtccaggcccctggcccctcctccctcaggcccaggagtctgggtgccagcctctacttcccctggacccaggG--TCACAGCCCTCGACTCTGTCCCCAAG-----------------CGTGGAACC--TCTACTCCAGGGCAGTGGAGT-CAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCGAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTGAGACCCTGGAGTTCCAGCCTGCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTCAGGCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCTGGCGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCTCAGGTA----AGGGAGGGGCCGGGGACAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCC-G---GGCCTGACCGTTTGGTTCCTGG--GCTGGGCTGGGGAG---CTGTACCTCACCCT------------------------GGGACTTCGTGGC-CTAAGTCCTTCCCGCCGTTTATCA-CC--CAGATACCTGCACAGACACGATGCCTTTGTGCAACACTTTATTGGGAAGGATTTACACATGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGGTGGAAGCCAT----AGGACGGCCGTCCCCAGGCCCGCGCATCCGCACCT--GTTTCCCCTTTGTGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATCGTTGTGATGAGCTAAAAGTGGAGCGAAAACCACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAGAGAAAGGGAA-TTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTGTGGATAGCCAGAAGCTGGAGCAGTCGCCAGTGA-GGCTCTTGTCTGGA---CAATACTTTGATTTTGCAGGAGTGGA---------G---GT-------GGCCCCTGGGC---------------AGAAGG------CAGGGAGGACACCCCCGGGTCTGCTGC-AGTTGAAGGCAGGGTATTTAGAGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CTAGCTGGCAGAGGGAGCATCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCAGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCAGCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGTCCCCGCAGGGCTGACTCCAGGCGGCCCTCAGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCTGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GGGGAGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015695 1842 + 64156825 cctcctcccttgga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtcggggtgccagtctctactttccctggacccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTTCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCATCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACC------------CCTTCAGTTCCTTTGTCCCCCATAATATCAGGAAGTGGAACCT--TCTCTTCAGCCCTC-AGACTCAGCAGGCCAGGCCTCCCCTT---TCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC-------------------------GGACTTTGTGGC-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACGTGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaaacttatgcttccttccaagtctgcaatatcggtgccatgagctaaaagtggagcgAAAGACACAAGGAAGAAG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGCGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCACGA-GACTCTTGTCCGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039336 1842 + 59248254 cctcctccctcgga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtcggggtgccagtctctactttccctggatccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTTCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCATCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACC------------CCTTCAGTTCCTTTTCCCCCCATAATATCAGGAAGTGGAACCT--TCTCTTCAGCCCTC-AGACTCAGCAGGCCAGGCGTCCCCTT---TCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC-------------------------GGACTTTGTGGC-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACGTGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaaacttatgcttccttccaagtctgcaatatcggtgccatgagctaaaagtggagcgAAAGACACAAGGAAGAAG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGCGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCACGA-GACTCTTGTCCGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCGTAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143510 1835 + 51301725 cctcctccctcaga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggAGTCCGAGTGCCAGTCTCTACTTTCCCTGAACCCAGGGGCCCACAGTCCTCAACTCCATCCCCAGG-----------------CGTGGACCCCTCATACTCCAGGACA---GAGTCCAGTCCTCAACTTCCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACCCCAGAGTTTCAGCCTTCAGTTCCTTTCTCCCCC---ATATCAGGAAGTGGAACCT--TCTCTTTAGCCCTT-AGACTTAGGAGG----------CCTT---TCCTCCCGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTATA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACGGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC------------------------GGGACTTCGTGGT-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGATGGCCGTCCCCAGGCCCACGCATCtacacctcagtttcccctttgtGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATCGGTGCAATGAGCTAAAAGTGGAGCGAAAGACAC----AAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGGCACCCAGAAGCTGGAGCAGGGGCCCACCA-GACTCTTGTCTGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGATAAAGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCATGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAaagccagccccagccccagggctgCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGTACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGTCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTcct-gaggagg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46848769 1855 + 50890351 cctcctccctcaga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtccgggtgccagtctgtactctccctggacccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTCCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCTTTAGCCCTCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACCCCAGAGTTTCAGCCTTGAGTTCCTTTCTCCCCCATAATATCAGGAAGTGGAACCT--TCTATTTAGCCCTC-AGACTCTGCAGGCCAGGCCTCCCCTT---TCCTCCAGCAGGACTCCCCCCTAGCCTGAAGGCCAGATGGATCCGAGCTTCTCCTGGCAT-C---CCTACCGCCTCTGGCCTCCCGGGGGGCCAGCCACCCGCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGCGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGTGAAAGGTCTCCTGGGAGCTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCT------------------------GGGACTTCGTGGC-CAAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCATAGGCCAAAGGATGAGAAGAGGGTTCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcatctcagtttcccctttgtgaaatgggaagcttatgcttccttccaagtctgcaatatcggtgcaatgagctaaaagtggagcgAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----TGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCATGA-GACTCTTGTCTGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------AGAGGG------CAGGGAAGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGTGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAAGGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430073 1803 + 49145316 cctcctccctcggacccaggagtccagg-ccccaggccctcctccctcagacccaggagtccaagtgccagcctctacttcacctgaacccaggggtccacagccctcgatcccatccccAGGGACTCAAA---------TGTGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGCCTTCAACTTCCTTTTCCCTCTAGTTCGGGAGTGTGGGGACCCAGCCTCTCCTATACCC--GACACCCAAACTCCTA-------------------------------------GCCTCTCACCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCACTTCCCTTCTCTCCTGTAATACCAGGAAGTGAAACCTTCTCTCTTCAGCCCTC-AGGCTCAGGAG--------------------------------TCCCACCTAGCCTGAAGGTTGGGTGGATCTGAACCTCTCCTGGCTT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCGCTAGAGGAGCCCCAGGCTGCTGAATCCAGGGTCGGGTTTT-CTTCCATGGCCTCAGGCTGGGC--------TCTCTAGTGGCCA-GCAGGCAGACACGGCCCCAGGTA----AGGGCGGGGCCAGGG-CAGGTGTGTACCTGGCCGGCAGGTGGCCCGG---AGGGAGTTAGGTACACTTCTTCCTGTAGTTTCTCAGGGCTGGGGATTCGAAAGGTCTCCTGGGACCTGAAGTCCCCGTGGTGCCC-G---GGCCTGACCGTTTGGTTCCTGG--GCCAGGCTGGCCG----CTGCACCTCAC-----------------------------------------CTGAGAC--TCCCGGTGTTTGTCA-CCCGCAGGTACTTGCACAGACACGATGCATTTGTGCA--ACTTTATTGGGAAAGATTTACACACTGTGA-CCTGTCACAGGCCAAAGGATGAGAAGAGGGAGCCAAGAGTGTTGGG-GCCCCAAGGTGGCTCAGACATAAGCCGT----GGGGTGGCAGGCCCCAGGCCTGTGTAtccgtgcctcagtttcctttttgtgaaatgggaagcttatgcttccttccaagtctgcaatatgggcgtgatgagctaaGGGCGGAGTGAGAGACACAGGGAAGAGG------------------------CTGCCCC--AGCT--CCAACCCCACACTGTGGATGC--AGAAAGGGAATTTGCCC-AAA--CCCACCACCCAGAGGCCCCTTC-----CGTTCTTGGGTAGCGCAGTGCTCTCTGAAGATCCCAAAGCCGGAGCAGGGGCAAGGGA-GACTTT--TCAGGA---CAGGACTTGGATTTTGTAGGAGGGGAGTGGCCACTG---GA-------GGCCCCTGGGC---------------AGAGGG------CAGGGAGGACACTGGCAAGTCTGCTTC-AGTGGCAGGCAGGGTATT---AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTTGCCAAGGTAAGGACTCCTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATCCCCGGG------------------A-----ACCGCTAGCAGAGGGAGCGTCTCGA----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGAGGCTGCCTTCCGCCGGCCGGGGCTGCCCCCAGCCAATGCCAGCCCCAGCCCCAGGGCAGCCAGGGCCAGGAAGTGGATGCAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCTGCCATTGAGAGGAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGCCCCCTTGGGCTCAGCCGCCCCCGCAGGGCAGACTCCAGCCGGCCCTCCGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCATGCCAGTAGGCACTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i calJac3.chr22 C 0 I 1119 s mm10.chr7 3677105 1754 + 145441459 ----------------------TTCGTGGCCCTAGACTCTCCCCCAC--------GGAGTCTAGGT-----------------TTGAACTC------CCATATCCCT-----TCTACTCTAAG-----------------TGTG----------ACTCTA--------AACTTCAA----CAACTTCCCGTTCCCTC--ATTGGTGAGCTTAGAATCCTGGCTCCTCACAAGCCTGATA---TTAGGGACCCG-------------------------------------TTTCCTGACTCTGTCCTCCAAGACCGTAAACTTGTACTGTTTTTCGGG------------AAATC---------------TGAGTTTCCTTCT---TAGGAAACCCAGGAAATGAAAGT---CCTCTTCGAGTCTC-AGGTTCAGGAGCTCAG--CTTCCCT----TCCTTTA--------------------------TGAATGGACCTGA--CTTTGCTGGACT-CTCTCCTACCTGTTCTGGCTTTCCGGGAGCTGGAGCAGGCTGGGGACTGGCCCCAGGCTTCCATGTTTGTGGATGTACCGTACTTCCA--GCACCCGTTCTTTCT------GTCTCTGGAGGCCC-CAGGGCGGGGACTGCCCTCGGTAAGGGAGGGAGGGGCCTGCTACAGGTCTGCACCTGGCCACTAGGTGACCCGG----GTGACTGCGGTACA---TTTCCTAT-----------------------AAAGGTCTCCTGGGAATTGAAGTCCTTACAGCCTCCTGAGCGGCCAAAC-------TTCATGGCAGCCAGACCC--------CCCCACCCCACCCCCCCAATACACACACAAATGCACACTGGCATTCTGGGT-CAGTGTCTTT-----GGTTTGTTG-CCCACAGTTATACTCACAAACA-AATGCA--TGTGTAACACTTTATTGGGAAAGCTTTATACATTCTGG-CCTGTCACAGGCCAAG-GATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTGGGGCTTCTCA----CATTTTAGCTTCTCCTTCAGCATGTGTAAGAC-CATGGTC---------TCTGAAACACTGGTGTGATGA--TAAAAACAAAGAGGAAAAC------AAGAAGGCTATCCCTCCCCTCTCCCAGAACCTGGCCCTGAAGTTCCTGCCCCCATACTGGGGACCC----ACTGGGAGTCTGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTG--GCTTTTTGAACATCTGAAGATTGTTGCAGAGATAATAGG---TTCAAGAGTGGATAGTAATACCCTGATGTTAGCAGAG-GAA---------G---GTCTGAAAAGGTCAAGATGC---------------TGAGAGAGCCCAAGAGAAGGATACC------TTAGCTTTAAATAGAAGGCAGAGGAATT--A-TTTGGGAAGAGGGGATCCTCTCCAGGCTCTTAGCCAAACAAGGGATTCTTGCTGGGTAAAGGaaacaaacaaacaaacaaacaaaAACCCCAAACAAACAGCCTGGTTCATGGAATTCCCAAA------------------AAAGCTTGAACTGGAAGGCAGGCCAATGCAGCAG-AGCTCACTCTTCCCGGAGCTTTTCCTTCGCTTGGCTGCTGGTGGCCTGGGATGGTGTCTTCCTCTTGCTGGGGCTGCCCCCACCCAAAACCAGCCCCAGCCCCAAGCAAGCCAGGGCTAGAAAGTGGACCCAGAAGTAGATGGAGGCCCAGTACCGGAGTGTGTCAGCCATGGAAAGGAGCACAAAGCCCATGCACATGTAGTCGTAGGCACGCATCTTCAGGAACCAGTGGACCCAGTCCCAGGCTTTCTGGCCCCCGGGGCTCAGGTGTCTCCGCAAGGCTGACTCCAAATAGCCCTCAGCAGCCAGGCACAGCGGGATGGTCATGAAGCTTAGGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCACTCAACAGCATGGTCCAGGCACTCCTGGAGGAAG- i mm10.chr7 C 0 C 0 s canFam3.chr1 19637707 1796 - 122678785 CCTCCTCCCTCAGACCCAGGAGCCCAGG-CCCCTGCTCCTCCTCCCTCAGACCCAGGAATCCAGGTCCCCAGTCCCTCCTCCTTCAGACCCAGGAGTCCA-GGCCCCATGTCCCCTCTGTAAGCACTGAAATGTGGGCTCCCTAGACCCCTCCTTCCTCAGGGCTGAGGAACCCAGTCTTCAATTTCCTTTTTCCTCTTGCTCAGGAGTTT-GCAACCCTGCCCCCCCTCTTC--------------------------------------------------------------------TCCCCTCT----------ACT------GCTCCCCAGG--------------ACACAGGAGTCCTAGCTCCTGGTTCCCTTCTCCCTCAGACAACCAGGAATTTAACCCT-CCCCCTTCTGCCCTCTGGACCCTGGAGTTTCAGCCTCCGGTCCCTGCCTCCCTCAGGACTTCCACC-AGCCCAA---------GGGGCTGGACCCCCTCCCACGC-C---CCCACCTGCTCTGGCCTCCCGGGGTGCCAGCCACCCTCCAGGGGAGCCCCAGGCCTCCGGTTCCCATGTCGGGCGCT-CTTCCATGGCCGCAGGTGAAACTGTTTCCGTCTCCAGCGGCCAGCTGGGCGCGGTCAGCCGCAGGTA----AGGAAGGGACATGGG-CAGGTCCATACCTGGCCACCAGGTGGCTCAGGGAGGGGAATCCGAAGCA---CTTGTCATCAACCAACAGGGCGGCTGCT-CGAAAGGTCTTCTGGGAACCGAAACCCCCA-GATGCC------AGTGTGACACCAGGGAGCCTGG--CTCGAGCCCATC-----CTGCAGCGCCCATC------------------------CTGCAGCGGCTGT-GTGAGCCCCACAC-CTGGTGGTCA-CTCATAGACACACATACAGAC--------CTCTTGGAACATTTTATTGGGGGAGGTTCACATAGTCTGACCCTACCTTAGGCCAGAAAATGACAAGAGGGTGACATAAGCACTGGG-ACCCTGAGGTGGCTCAGATGGAAGCTGC----AG---------CTCCTAGC-----------TGCCTCAGTTTACCCGTTGTGAA-----------ATGTTCCCTTCCCGGCCTGAAACACTGCT-TGATGA---------AAGGGGGAAAGCCCACGAGAGAGG--------TTCCCACTCCCAGGGCCTGCCCTGAGGCT-CCCGGCCCCACACCATGGAGCCAGAAACAGGGAATTTGCCCGAGA--AT-----CCCCGTGGCCCTGTT--GGGGGGCTGGGGAGTGGGTAGCTCGCTCTGAAGACCTGGCAGCTGGGGCAGGGACCAAGGGAGATTCT--TCTAGA---CAACACCTGAACTTTCCAGAAGGGAA---------GTCTGA-------GCTTCCTGAGCCCTCGGGTCAGGGCAGGGGAG------CAGGGAGAGCAGCCCTGC-CTTGCT---GGGGGAGGGTGGGGTGCAG--AGCTG------AGGGAATCCTCTCCAGGCCCCAGCCCAA-TCAGGGGCTCTTTCTGGG-AAAGGAGAC------------------------------AGCAGCCTGGTTCATGGAATTCCCAGGCAGAAGCTTAGTGGCTGCA-----GTGGCGGGCAAA-GGAGTGTCACGGCGGTGGCCTACTCCTCCCGGAGTTTTTCTGGGGCGAG---GCTGGCGGCCTGGGGTGACGTCTTCCTGCGGCCGGGGCTGCCCCCACCCAGGGCCAGCCCCAGCAGCAGGGCGGCCACAGCCACGATGTGGACACAGAAGTAGACAGAGGCCCAGTACCGGAGGGTGTCTCCCAGGGACAGCAGCACAAAGCCCATGCACATGTAATCGTAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCGGGGCTGAGCCGCCCCCGCAGGGCTGACTCCAGGCAGCCCTCAGCCGACAGGCACAGCGGGATGGTCAGGAAGCTTAGGTAGTAGCCAGGGTGCAGGCCGTGCCAGTAGGCGCTCAGCAACATGGTCCAGGCGCTCCT-TGGGGGAG i canFam3.chr1 I 878 C 0 a score=42844.000000 s hg38.chr19_GL949748v2_alt 149248 14 + 1064304 AGGCTGGGAGTCAG s panTro4.chr19 59083869 14 + 63644993 AGGCTGGGAGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959678 14 + 60714840 AGGCTGGGAGTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726120 14 - 106955855 CAGCTGGGAGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017537 14 + 64156825 AGGCTGGGAGTCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041178 14 + 59248254 AGGCTGGGAGTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145345 14 + 51301725 aggctgggggtcAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850624 14 + 50890351 AGGCTGGGAGTCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3678859 12 + 145441459 --ATATTGAGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19639503 14 - 122678785 AGGCCGAGATTCAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45431876 1119 + 49145316 I a score=253274.000000 s hg38.chr19_GL949748v2_alt 149262 78 + 1064304 GACCTACGagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--cccctcctccctcagac s panTro4.chr19 59083883 78 + 63644993 GACCTACGagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--cccctcctccctcagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959692 78 + 60714840 GACCTGCGagtccaggtccccagtgcccacggtccccagatccaggagtccaggaccccag--cccctcctccctcagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726134 78 - 106955855 GACCTGCAagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--ccccgcctccctcagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017551 78 + 64156825 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagttccgggctccag--cccctcctccctcagac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041192 78 + 59248254 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagtcccgggctccag--cccctcctccctcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145359 78 + 51301725 GACCTGCGAGTCCAGGTCCCCAGTGCCCACTGACACCAGATCCAGGAGTCCGGggctccag--cccctcctcccttaGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850638 78 + 50890351 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagtccggggctccag--cccctcctccctcagac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45432995 77 + 49145316 gacccagaaatccagagccccagc-ctctcctcccccagccccaggagtccagacccccag--cccctcctccccaagcc i calJac3.chr22 I 1119 C 0 s mm10.chr7 3678871 54 + 145441459 GACACACAAGTTCAAG-CTTCAGTCCTCACTGTCTCATG-------------------------CCTCCCTTCCTCAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19639517 79 - 122678785 GACCCGGGAG-CCAGGCCCCCTAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCCAGCCCCCTCTTCTCTCAGAC i canFam3.chr1 C 0 C 0 a score=76359.000000 s hg38.chr19_GL949748v2_alt 149340 35 + 1064304 cgagaagtgcagg--cccagcccc-tcctccctcagac s panTro4.chr19 59083961 35 + 63644993 ccagaagtgcagg--cccagcccc-tcctccctcacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959770 13 + 60714840 ccagaagtgcaga------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726212 35 - 106955855 ctagaagtgcagg--cccagcccc-tcctccctcagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017629 34 + 64156825 ccaggagtgcagg--cccagcccc-tcctccctcaga- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041270 35 + 59248254 ccaggagtgcagg--cccagcccc-tcctccctcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145437 36 + 51301725 CCAGGAGTGCAGG--ccccaccccgtcctccctcagac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433072 37 + 49145316 ccaggagtccagacccccggcccc-tcctcccccaggc i calJac3.chr22 C 0 C 0 s mm10.chr7 3678925 35 + 145441459 CCAGGAGTACAGG--GCTCAGCCC-TCCTCCCTCAGAT i mm10.chr7 C 0 C 0 s canFam3.chr1 19639596 36 - 122678785 CCAGGAGTCCAGG-CCCCAGCCCC-TTCCTCCTCAGAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46850716 0 + 50890351 C a score=57425.000000 s hg38.chr19_GL949748v2_alt 149375 31 + 1064304 ccaggagtccaga-ccccacc-ccttcctccct s panTro4.chr19 59083996 31 + 63644993 ccaggagtccagg-ccccagc-tcctcctccct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60017663 32 + 64156825 ccaggagtccaggcccccagc-ccctcctccct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041305 31 + 59248254 ccaggagtccaga-ccccagc-ccctcctccct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145473 32 + 51301725 ccaggagtccaga-ccccacctccctcctccct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433109 31 + 49145316 ccaggagtccagg-ccccagc-ccctcctccct i calJac3.chr22 C 0 C 0 s mm10.chr7 3678960 29 + 145441459 TTAGGAGTTCAGG-CCC--AC-TCTTCCTTCCT i mm10.chr7 C 0 I 4687 s canFam3.chr1 19639632 30 - 122678785 CCATGAGTCCAGG-CCCCA-C-CCCTCCTCCCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55959783 0 + 60714840 C e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C a score=120964.000000 s hg38.chr19_GL949748v2_alt 149406 90 + 1064304 cagacccaggagatcagg-ccccag--tccctcctccctcagacccaggagaccag-accccacc-----------------------------------tccctcctccctcagatccaggagtccag s panTro4.chr19 59084027 124 + 63644993 cagacccagaagtgcagg--cccag--cccctcctccctcacacccaggagtccag-accccaccccttcctccctcagacccaggagatcaggccccagtccctcctccctcagacccaggagtccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959783 71 + 60714840 --------------------cctgg--cccctcctccctcagacccaggagtccag-accccacc-----------------------------------ttcctcctgcctcacatccaggagtccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60017695 89 + 64156825 caga-ccaggagtccaggcccccag--cccctcctccctcaga-ccaggagtccag-gcccccag-----------------------------------cccctcctccctcagacccaggagtccag i rheMac3.chr19 C 0 M 200 s macFas5.chr19 55041336 90 + 59248254 cagacccaggagtccaggcccccag--cccctcctccctcaga-ccaggagtccag-gcccccag-----------------------------------cccctcctccctcagacccaggagtccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145505 61 + 51301725 cagatccaggagaccagg-ccccag--gccctccccactcagacccaggagaccag-gccccagg---------------------------------------------------------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433140 90 + 49145316 cagacccagaaatccagacccccag--cccctcctccctcagacccaggagtccag-gccccagc------------------------------------ccttcctcccccagacccaggagtccag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639662 94 - 122678785 CAGACCCAGGAGTTCAGGCCCCTCGGCCCCCTCCTCCCTCAGACCCAGGAGTCCAGAGTCCCAGC-----------------------------------CCGCTCCTCCCTCAGACCCAGGAGTTCAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C a score=3412.000000 s hg38.chr19_GL949748v2_alt 149496 18 + 1064304 --accccacttccctcctcc s panTro4.chr19 59084151 18 + 63644993 --accccacctccctcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959854 7 + 60714840 --agcccac----------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55041426 18 + 59248254 --gcccccagcccctcctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145566 9 + 51301725 -----------ccctccccG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433230 17 + 49145316 ---gccccagcccctcctcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639756 20 - 122678785 GCCCCTCAGCCCCCTCCTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C e rheMac3.chr19 60017784 200 + 64156825 M a score=9440.000000 s hg38.chr19_GL949748v2_alt 149514 7 + 1064304 ctcagat s panTro4.chr19 59084169 7 + 63644993 ctcagac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60017984 7 + 64156825 ctcagac i rheMac3.chr19 M 200 C 0 s macFas5.chr19 55041444 7 + 59248254 ctcagac i macFas5.chr19 C 0 C 0 s calJac3.chr22 45433247 7 + 49145316 ctcagac i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639776 7 - 122678785 CTCAGAC i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e ponAbe2.chr19 55959861 0 + 60714840 C e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C e papAnu2.chr19 47145575 0 + 51301725 C a score=102117.000000 s hg38.chr19_GL949748v2_alt 149521 44 + 1064304 ccaggagaccagaccc--cacctccctcctccctcagatccaggag s panTro4.chr19 59084176 44 + 63644993 ccaggagaccagaccc--catttccctcctccctcagatccaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959861 25 + 60714840 ---------------------ttccctcctccctcagatccaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726247 44 - 106955855 ccagaagaccagaccc--cacctccctcctccctcagatccaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017991 44 + 64156825 ccaggagtccagaccc--cagctccctcctccctcagatccaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041451 44 + 59248254 ccaggagtccagaccc--cacctccctcctccctcagatccaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46850716 43 + 50890351 tcaggagcccaggccc--cacc-ccctcctccctcagatccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433254 44 + 49145316 ccagaaatccaggccc--ccagcccctcctccctcagacccaggag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639783 46 - 122678785 CCAGGAGTTCAGGCCCCTCAGCCCCCTCCTCCCTCAGACCCAGGAG i canFam3.chr1 C 0 I 2038 e mm10.chr7 3678989 4687 + 145441459 I e papAnu2.chr19 47145575 0 + 51301725 C a score=674534.000000 s hg38.chr19_GL949748v2_alt 149565 264 + 1064304 accaggccccaggccctccccactcagacccatga-------ccctagctccGGAAGGCGGAGGAGGCTACAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTTCTTCTTTAAAGATTTAACATTTTATAT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTCTTAATTCTTCAGCCCAGT--GG-----ttttttttt-tttttttttgagacagagtctcgctctgtcgcccagg s panTro4.chr19 59084220 266 + 63644993 accaggccccagaccctccccgctcagacccaTGC-------CCCTAGCTCCGGAAGGCGGAGGAGGCTACAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTTCCACACACACT---CAGTCCTAT-CAAGACCCTCTTCTTCTTTAAAGATTTAACATTTTATAT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTCTTAATTCTTCAGCCCAGT--GG---ttttttttttt-tttttttttgagacagagtcttgctctgtcgcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959886 260 + 60714840 accaggccccaggccctccccgctcagacccatgc-------ctctagctccagAAGGCGGAGGAGGCTATAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCCCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTCCTCCTTTAAAGATTTAACGTTTTATAT-----TCCACTGCCCTTCCTCTCCCAAGAACAACAAGGCATAATTCTTCAGCCCAGT--GG---------ttttt-tttttttttgagacagagtctcgctctgtcgcccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726291 273 - 106955855 accaggccccagaccctccgcgctcagacccaTGC-------CCCTAGCTCCAGAAGGTGGAGGAGGCTATAGGCCTCAGTCTCCTTCAAGGATCCGGGAGCTCGCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTCCTCCTCTAAAGATTTAACACTTTATATTCCACTCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAGT--GGtttttttttttttt-tttttttttgagacggagtctcgctctgtcgcccagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60018035 265 + 64156825 accaggccccaggccctccctgctcagaaccaTGC-------CCCTAGCTCCAGAAAGCGGAGGAGGCGATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAAT--GGTTTTTTTTTTGTTTGTTTTTTTTTTAGACAGAGTCTTTCTCTGTTGCCCAGG i rheMac3.chr19 C 0 M 581 s macFas5.chr19 55041495 265 + 59248254 accaggccccaggccctccctgctcagaaccaTAC-------CCCTAGCTCCAGAAAGCGGAGGAGGCGATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAAT--GGGtttttttttgtttgttttttttggagacagagtctcgctctgtcacccgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145575 242 + 51301725 ----------------------CTCAGAACCATGC-------CCCTAGCTCCAGAAGGTAGAGGAGGCTATAG------GTCTCCTTCAGAGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAagatttaacattttatgt-----tccACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTATTCAgcccagt--ggttttttttttggtt-ttgttttttgagacggagtctcgctctgtcacccagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850759 266 + 50890351 accaggccccaggccctccctgctcagaaccatga-------ccctagctccGGAAGGCGGAGGAGGCTATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCGGGACCAACAAGTC-TAATTCTTCAGCCCAGTGGGGttttttttttgttt-tttctttttgagacggagtctcgctctgtcacccagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433298 264 + 49145316 tccaggccctgggccctccctgctcaaacccaTGCCCCTTTTCCCTAGCTCCAGAAGGTGGAGGAGGCTATAGGCTGCTGTCTCCTTCAGGGATCCAGGAGCCCCGAGCCTTCCACACACACTTCACAGCTGTATCCCAGGCCATCTCCTCCTTTAAAGATTGATCATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAAGAAGTC-TAATTGTTGGGCCCACT--GGttctttttctttct----------------gagtcttgccctgtggctcagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I a score=107570.000000 s hg38.chr19_GL949748v2_alt 149829 46 + 1064304 ctagagtgcagtggcgcgatcttggctcactgcaagctccgcctcc s panTro4.chr19 59084486 46 + 63644993 ctagagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960146 46 + 60714840 ctagagtgcagtggcgcgatctcggctcactgcaagctccgccttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726564 46 - 106955855 ctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041760 46 + 59248254 ctggagtgcagtggccggatctcagctcactgcaagctccgcctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145817 46 + 51301725 ctggagtgcagtggctggatctcgactcactgcaagctccgcctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851025 46 + 50890351 ctggagtgcagtggcccgatctcagctcactgcaagctccgcctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433562 46 + 49145316 ctggagtgcagtgacgcaatctcggctccctgcaacctccgcctcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e rheMac3.chr19 60018300 581 + 64156825 M a score=5192.000000 s hg38.chr19_GL949748v2_alt 149875 4 + 1064304 cagg s panTro4.chr19 59084532 4 + 63644993 cggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960192 4 + 60714840 cagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726610 4 - 106955855 cggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041806 4 + 59248254 cagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46851071 4 + 50890351 cagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433608 4 + 49145316 ttgg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e papAnu2.chr19 47145863 0 + 51301725 C e rheMac3.chr19 60018300 581 + 64156825 M a score=53422.000000 s hg38.chr19_GL949748v2_alt 149879 48 + 1064304 ttcacgccattctc-ctgcctcagcctcccgagtagctgggactacagg s panTro4.chr19 59084536 48 + 63644993 ttcacgccattctc-ctgcctcagcctcccgagtagctgggactacagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960196 48 + 60714840 ttcacgccattctt-ctgcctcggcctcccgagtagctgggactacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726614 48 - 106955855 ttcacgccattctc-ctgcctcagccaccagagtagctgggactacagg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46851075 48 + 50890351 ttcaagtgattctc-atgcctcagcctcccaagtggctgggattacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433612 48 + 49145316 ttca-gccattgtcactgcttcagcctcccgagtagctgggattacagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=205251.000000 s hg38.chr19_GL949748v2_alt 149927 292 + 1064304 cgcccgccaccacgcccggctaattttcttttctatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatctgcccgccttggcctcccaaagtgctgggatcacaggtgtcagacaccacacccggGC-AGCCcggtggttcttaacctggggtcccaggtctggcatcagcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-gg---gggtggggcccaggagaagtcttcca s panTro4.chr19 59084584 293 + 63644993 tgcccgccaccatgcccggctaattttcttttctatttttagtagagat-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgccttggcctcccaaagtgctgggatcacaggtgtcagccaccacacccggGC-AGCCTGgtggttcttaacctggggtcccaggtctggcatcagcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccctggg---ggggggggcccaggagaagtcttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960244 292 + 60714840 cgtctgtcaccacacccggctaattttcttttgtatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgctctcctgacccc--gtgatccgcctgcctcggcctctcaaagtgctgggattacaggtgtgagccaccgcacccggtc-AGCCcggtggttcctaacctggggtcccaggtctggcatcatcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-gg---ggttggggcccaggagaagtcctcca i ponAbe2.chr19 C 0 I 478 s nomLeu3.chr10 102726662 296 - 106955855 cgcccaccaccacgcccggctaattttcttttgtatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatctgccctccttggcctcccaaagtgctgggattacagacatgagccactgtgtccggccTAGCCcggtggttcttaacgtggggtcccaggtctggcatcaacatcgcctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-ggttagggtggggcccaggagaagtcttcca i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45433660 273 + 49145316 catgtaccaccactcctggctaat----ttttctattcttagtagaggcgggggtttcaacatgttggccaggctggtctcaaactcttgacctcaggtgatccgcccacctcagtctcccaaagtgctgggattctaggcgtgagccactgAAGTGGGCC----Ccagtggttctt------------cagctctggcatcagcatcgactgagaacttgtgacacacacagatccctgtcgccacgcctcctgcaccagaagccct-gg---ggctggggccc---agaactcttccg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=66628.000000 s hg38.chr19_GL949748v2_alt 150219 151 + 1064304 agttaacaagtcctcca-gtgactctgatgcctgttaacatttgacaactcctgCCTGGCTCATGAAGATCCAGAAGTCCCTGGCCTGTGGTCCTTCCTTATTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCACCATCTT s panTro4.chr19 59084877 151 + 63644993 ag-taacaagtcctccaggtgactctgatgcctgttaacatttgagaactcctgCCTGGCTCATGAAGATCCAGAAGTCCCTGGCCTGTGGTCCTTCCTTATTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCACCATCTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102726958 151 - 106955855 gg-taacaagtcctccaggtgacttagatgcctgttaacatttgagaactcctgCCTGGCCCATGAAGGTCCAGAAGTCCCTGGCCTGTGGTGCTTCCTTACTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCGCCATCTT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45433933 141 + 49145316 gg-taacaagtattccaggtgacttcgatgcctgctaacatttgag-aCTGCTGCCTGGCCCATGAAGA---------CCCTGGTCTGTGGGCCTTCCTTATTCTGTGGCCAGGAGTTATGTTCCTCTTCCTCCAAGGCCCAGATCCATCTt i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=17634.000000 s hg38.chr19_GL949748v2_alt 150370 79 + 1064304 TCCTCACtctttt----------tatttttttggagacagagtctcgctctgttgccacacgacaaggctcactgcagcctctgcctct s panTro4.chr19 59085028 89 + 63644993 TCCTCACtcttttttattttttatttttttttggagacagagtctcactctgtcgccacaggacaaggctcactgcagcctccgcctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727109 85 - 106955855 TCCTCACtctttt----tttttttttttttttggagacacagtctcgctctgtcgccatgcgacaaggctcaatgcaacctccacctct i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=1813.000000 s hg38.chr19_GL949748v2_alt 150449 4 + 1064304 tgga s panTro4.chr19 59085117 4 + 63644993 tgga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727194 4 - 106955855 tggg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47145863 4 + 51301725 tggg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=42472.000000 s hg38.chr19_GL949748v2_alt 150453 48 + 1064304 ttcaagcgattcttatgcctcagcctcccaagtagctgggattacagg s panTro4.chr19 59085121 48 + 63644993 ttcaagcgattcttatgcctcagcctcccaagtagctgggattatagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727198 48 - 106955855 ttcaagctattctcatgcctcagcctcccaagtagctgggattacagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041810 48 + 59248254 ttcaagtgattctcatgcctcagcctcccaagtggctgggattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145867 48 + 51301725 ttcaagtgattctcatgcctcagcctcccaagtagctgggattacagg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e rheMac3.chr19 60018300 581 + 64156825 M a score=409960.000000 s hg38.chr19_GL949748v2_alt 150501 330 + 1064304 caagcgccaccaaactcagctaatttctgtatttt---ttgttgttgttgttcagacggagtctcgctctgccgcccatgctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctggtaaagacggggtttcaccatgttggccaggatgctctcaatctcttgaccttgtgatccacccgccgtggcctaccaaagtgctgggattacaggcgtgagccactgcacccagcca s panTro4.chr19 59085169 330 + 63644993 caaatgccaccaaactcagctaatttttgtatttt---ttgttgttgttgttcagacggagtctcactctgccgcccatgctggagtgcagtggcgcaatctcagctcactgcaacctctgcctcccgggttcaagtcattctcctgcctcagcctcccaagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctagtaaagatggggtttcaccatgttggccaggatgctctcaatctcttgaccttgtgatccacccgccgtggcctaccaaagtgctgggattacaggtgtgagccaccgcacccagcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727246 333 - 106955855 caagtgccaccaaacccagctaatttttgtattttttgttgttgttgttgttcagacggagtctcgctctgccacccatgctggagtgcagtggtgcaatcttggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctgttaaagacggggtttcaccatgttggccgggatggtctcgatctcttgacctcgtgatccacccgtcttggcctaccaaagtgctgggattacaggcgtgagccaccgcgcccggcca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041858 328 + 59248254 caagtgccaccaaacccagctaatttttgtatttt---t--ttgttgttgttcagacggagtctcgctgtgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagcagcggggactacgggtgtgtgccaccacgcctggctaatttttatatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccgcctgcctcggcctcccaaagtgctggaattacaggcgtgagccaccgtgcccggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145915 327 + 51301725 caagcgccaccaaacccagctaatttttgta-ttt---t--ttgttgttgttcagacggagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgagttcaagtgattctcctgcctcagcctcccgagcagctgggactatgggtgtgtgccaccatgccaggctaatttttgtatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851123 326 + 50890351 caagtgccaccaaacccagctaatttttgtatttt---t--ttgttgttgttcagac--agtctcgctctgtcacccaggctggagtgcagtggcgcagtctcggctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagcagctgggactacgggtatgtgccaccacgccaggctaatttttgtatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccacctgcctcggcctcccaaagtgctggaattacaggcgtgagccaccgtgcccagcca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M a score=65810.000000 s hg38.chr19_GL949748v2_alt 150831 39 + 1064304 tttttgtatttttagtagagatggggtttcaccacgttg s panTro4.chr19 59085499 39 + 63644993 tttttgtatttttagtagagacggggtttcaccaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55961014 39 + 60714840 tttttgtatttctggtaaagatggggtttcaccacactg i ponAbe2.chr19 I 478 C 0 s nomLeu3.chr10 102727579 39 - 106955855 tttttgtattttcagtagagacagggtttagccacgttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042186 39 + 59248254 tttttgtatttttagtagagatggggtttcaccacattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146242 39 + 51301725 tttttgtatttttagtagagatggggtttcaccacattg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851449 39 + 50890351 gttttgtatttttagtagagatggggtttcaccacattg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M a score=108500.000000 s hg38.chr19_GL949748v2_alt 150870 94 + 1064304 gccaggatggtctcgatctcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggtctgagccaccgcgcccagccTC s ponAbe2.chr19 55961053 94 + 60714840 gccaggatggtcttgatctcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggtctgagccaccgcgcccagcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727618 92 - 106955855 gccaggatggtcttgatcttctgactttgtgatccacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccATCC-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042225 93 + 59248254 gccgagatggtcttgatctcctgaccttgtgatccatctgcctcggcctcccaaagtg-tgagattacaggcgtgagccattgcacccggcctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146281 93 + 51301725 gccaggatggtcttgatctcctgaccttgtgatccatccgcctcggcctcccaaaatg-tgggattacaggcgtgggccattgcacccggcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851488 93 + 50890351 gccaggatggtcttgatctcctgaccttgtgatccatccgcctcggcctcccaaagtg-tgggattacaggcatgggccgttgcacccggcctc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M e panTro4.chr19 59085538 0 + 63644993 C a score=34061.000000 s hg38.chr19_GL949748v2_alt 150964 26 + 1064304 -tttttttttctttgtaaagatggagt s ponAbe2.chr19 55961147 26 + 60714840 -tttttcttcctttgtagagatggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727710 23 - 106955855 ----ttttttctttgtatatatggagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042318 25 + 59248254 -tt-ttttttctttgtagagatggcgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146374 25 + 51301725 -tt-ttttttctttgtagagatggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851581 25 + 50890351 -tt-ttttttctttgtagagatggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45434074 26 + 49145316 ttt-ttttttctttgtagagatgtaat i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e rheMac3.chr19 60018300 581 + 64156825 M e panTro4.chr19 59085538 0 + 63644993 C a score=443611.000000 s hg38.chr19_GL949748v2_alt 150990 211 + 1064304 cttgctatgttgacctggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccattgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCATTGGCTTTCTGGTTCTTCAAGAGTGCGGAggctgg-g-tgcaatggc--tggcacctgtaatcccagcactttgggagg s ponAbe2.chr19 55961173 210 + 60714840 cttgctgtgttgccctggctggtctc-aactgctgatcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccattgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCATTGGCTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g-tgcaatggc--tggcacctgtaatcccagcactttgggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727733 213 - 106955855 cttgctgtgttgccctggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccactgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCGTTGGCTTTCTGGTTCTTCAAGAGTGTGGAggttgg-g-tgcaatggctgtggcacctgtaatcccagcactttgggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60018881 199 + 64156825 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTCTTGAGAAGGGAAGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g--gcaacggc--tggcgcctgtaatcgtggcactttgggagg i rheMac3.chr19 M 581 I 1301 s macFas5.chr19 55042343 199 + 59248254 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTCTTGAGAAGGGAAGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g--gcaacggc--tggcgcctgtaatcgcggcactttgggagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146399 199 + 51301725 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------cattgcacctggccaagtcCTGTTTTCTTGAGAAGGGAGGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAGGCTGG-G--GCaatggc--tggcacctgtaatcgcagcactttgggagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851606 200 + 50890351 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTTTTGAGAAGGGAGGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctggag--gcaacagc--tggcgcctgtaatcgcagcactttgggagg i chlSab2.chr6 C 0 I 1319 s calJac3.chr22 45434100 201 + 49145316 gttgctgtttt--ccaggctggtcttgaactcctgagcttaagtgatcctctcaccttggcctcccaaagtactggaattacagacgtcagccactgcacctggccAACTCCTGGTATCTTGAGAAGGGAGGACCACTGGCTTTCTGGTTCTTCAGGA---------CCAG-GTTATAgtgcc--ttgcacctgtaatcccagcactttgggagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=2800.000000 s hg38.chr19_GL949748v2_alt 151201 1 + 1064304 c s ponAbe2.chr19 55961383 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727946 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020381 1 + 64156825 c i rheMac3.chr19 I 1301 C 0 s macFas5.chr19 55042542 1 + 59248254 c i macFas5.chr19 C 0 I 1305 s papAnu2.chr19 47146598 1 + 51301725 c i papAnu2.chr19 C 0 I 1306 s chlSab2.chr6 46853125 1 + 50890351 c i chlSab2.chr6 I 1319 C 0 s calJac3.chr22 45434301 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=6790.000000 s hg38.chr19_GL949748v2_alt 151202 3 + 1064304 taa s ponAbe2.chr19 55961384 3 + 60714840 taa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727947 3 - 106955855 taa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020382 3 + 64156825 taa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55043848 3 + 59248254 taa i macFas5.chr19 I 1305 C 0 s papAnu2.chr19 47147905 3 + 51301725 taa i papAnu2.chr19 I 1306 C 0 s chlSab2.chr6 46853126 3 + 50890351 taa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45434302 3 + 49145316 tga i calJac3.chr22 C 0 I 535 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=249798.000000 s hg38.chr19_GL949748v2_alt 151205 140 + 1064304 aaatacaaagattagtctgtcatggtagcacgtgcctataatcccagctactaggggggctgagacaggaggattgcttgaacctgggagggagaggttgcagtgagccgagatcacgccactgcacttgagcTGTAAAA s ponAbe2.chr19 55961387 140 + 60714840 aaatacaaagattagtctggcacggtggcacgtgcctgtaatcccagctactaggggggctgagacaggaggactgcttgaacctgggagggggaggttgcagtgagccgagatcatgccactgcacttcagcTGTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727950 137 - 106955855 aaatacaaagattagtctggcatggtgccacgtgcctgtaatcccagctactaggggggctgagac---aggactgcttgaacctgggagggggaggctgcagtgagctgagatcacgccactgcacttcagcTGTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020385 140 + 64156825 aaatacaaagattagcctggcatggtagcacgtgcctgtaatcccaggtactaggggggctgaggcaggaggatagcttgaacccgggagggggaggttgcagtgagccgagatcgtgccacttcacttcagcTGTAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55043851 140 + 59248254 aaatacaaagattagcctggcatggtagcacgtgcctgtaatcccaggtactaggggggctgaggcaggaggatcgcttgaacccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagcTGTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47147908 140 + 51301725 aaatacaaagattagcctggcatggtagcatgtgcctgtaatcccaggtactaggggggctgaggcaggaggatcgcttgaacccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagctgtaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46853129 140 + 50890351 aaatacaaagattagcctggcatggtagcacgtgcctggaatcccaggtactaggggggctgaggcaggaggatcgcttgaatccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagcTGTAAAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434305 535 + 49145316 I e panTro4.chr19 59085538 0 + 63644993 C a score=1354750.000000 s hg38.chr19_GL949748v2_alt 151345 624 + 1064304 TAAACAAAAACGATGGAtcctgtgcattttaaggtgtttaggagcatccctggcccccacccacgacatccgactagcaccttccagttacaacaacatgtctccagggattgccatgtgtctcctgggggt---gcagcagcagcacagttgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGCGTCATC--TATACCTggccagatgcagtggctcatgcttgtaatctcagcactttgggaggctgagatgggaggactgcttggggccaggag-tttgagaccagcctggtcaacacag---tgagacctcatctctatacattttttaaaaagt-aAAAAAAAAATAATAATAATACTTAAAAAATTTTggccgggcatggtgactcacgcctgtaatcccagcacgttgggaggccgaggcacgcggatcacttgaggccaagagttcgag------accagcctggccaacatggtgaaaccctgcgtctactC----------------------------------------------------TTggcacgagaatca----cttgaacccaggagatggaggttgcagtgagctgagatcacaacactgcactccatcctgggtgacagagcATCAAaatactaata s ponAbe2.chr19 55961527 619 + 60714840 TAAACAAAAACGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccccccactacatccgactagcaccttccagttacaacaacatgtctccagggattgccatgtgtctcctgggggt---gcagcagcagcacaattgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTGTCATC--TATACCTggccagatgcagtggctcacgcctgtaatcccagcactttgggaggctgagacgggaggactgcttggggccaggagttttgagaccagcctggtcaacacag---tgagacctcatctctatatattttttaagaagt-aaaaa------aataataataattaaaaaattttggccgggcatggtgactcacgcctgtaatcccagcacgttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------accagcctggccaacatggtgaaaccttgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaagagatggaggttgcagtgagctgagatcacaacactgcactccaccctgggtgacagagcATCAAaataataata i ponAbe2.chr19 C 0 I 194 s nomLeu3.chr10 102728087 617 - 106955855 GAAACAAAAACAATGAAtcctgtgcattctaaggtgtttaggagcatgcctggcctccacccactacatccgactagccccttccagttacaacagcatgtctccagggactgccatgtgtctcctcggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGACCTCAGCCCCAGAGC-TTTAAGCATCATC--TATACCTggccagatgcagtggctcacgcttgtaatcccagcactttgggaggctgagatgggaggactgcttgaggctaggag-tttgagaccagcctggtcaacacag---cgagacctcatctctatatattttttaaaaggt-taaaa------aa-aaaaTTAATTAAAAAATTTTggccgggcatggtgactcacgcctgtaatcccagcactttcggaggccgaggcaggtggatcacttgaggccaagagttcaag------accagcctggccaacatggtgaaaccctgagtctactc----------------------------------------------------ttggcacgagaatca----cttgaacccaggagatggaggttgcagtgagctgagatcacaacactgcactccaccctgggtgacagagcatcaaaataataata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020525 630 + 64156825 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccacccactacatcccactagcaccttccagttaaaacaaaatgtctccagggatttccacgtgtctcctgggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCACCAGTATA------cgggcatggtgattcatacctgtaatcccggcactttggcaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcaacacag---cgagacctcatctctctgtattttttaaaaagt--aaaaaaaa--aaaaaaattaattaaaaaattttggccagacatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgatactagcactagcctggccaacatggcgaaaccctgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcaaaataataata i rheMac3.chr19 C 0 I 1075 s macFas5.chr19 55043991 631 + 59248254 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccacccactacatcccactagcaccttccagttaaaacaaaatgtctccagggatttccacgtgtctcctgggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCACCTGTATACCTggccagatgcagtggctcatgcttgtaatcctggcactttggcaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcaacacag---cgagacctcatctctctgtattttttaaaaagt-aaaaaaaaa--aaAAAAATTAATTAAAAAATTTTggccaggcatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcaaaataataata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47148048 632 + 51301725 taaacaaaaaggatgAATCCTGCGCATTTTAAGGTGTTTAggagcatccctggcctccacccactacaTCCCACTAGCACCTTCCAGTTAAAACAAAGTGTCTCCAGGGATTGCCACGTGTCTCCTGGGGGT---GCAGCAGCAGCACAACTGCCCCCAGTTGAGAAGCACTTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCATCTATATacctggccagatgcagtggctcacgcttgtaatcccggcactttgggaggctgagatgggaggactgcttggggccaggag-tttgcgaACAGCCTGGTtaacacag---cgagacctcatctctctatattttttaaaaagtaaaaaaaaaa--aaaaaaattaattaaaaaattttggccaggcatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcgtCTACTC----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcgaaataatacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46853269 635 + 50890351 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccactcactacatcccactagcaccttccagttaaaacaaaatgtctccagggattgccacgtgtctcctgggggt---gcagcagcagcacaattgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCATCTATATACCTggccagatgcagtggctcacgcttgtaatcccggcactttgggaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcagcacag---cgagacctcatctctctatattttttaaaaagt-gaaaaaaaa--aaaAAAATTAATTAAAAAATTTTggccaggcatggtgactcacgcctgtaaccccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcgtctactc----------------------------------------------------ttggcatgagaatcatttgtttgaacccaggagatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacagagcATCGAaataataata i chlSab2.chr6 C 0 I 636 s calJac3.chr22 45434840 676 + 49145316 TAAAC---AAGGATGAgtcctgtgcgtg-taaggtgcttaggagca-ctgtgggctccacccactccatgcccctagtcccttccagttacaacaaaacgtctccaggtattgccccgcgtctcctggaggtgcagcagcagcagcagaatttcccccagttgagaagcgctTGTC-AAACACTGAGGTGCTCTGGGCTTTGATGTGGCCTCAGCCCCAGAGCTTTTAAGTATCATC--TATACCTggctgggcacagtggctcatgcttgcagtcccagcgctttgggaggctgagatgggaggactgcttggggccaggac-tttgagaccagcctagtcaacacaggcctaagtcaacatctctatatattttttaaaaact-aAAAA------AAAAAAATTAATTTAAAAACTTTggtcaggcttggtggctcaagcctgtaattccagcacttcgagaggctgaggtaggtggatcacttgaggccaagagtttgag------actagcctggccaacatggtgaaaccccacatctactaaagataaaaaaattagctgggcgtggtgtcgcacacctgtaatcccagctagttggcaggagaatca----cttgaacccaggatatggaagctgcagtgagctgacgtcgtgccactgcactccaccctggg-gacaaagcgtcaaaa-aataata i calJac3.chr22 I 535 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=-570.000000 s hg38.chr19_GL949748v2_alt 151969 7 + 1064304 ctaatac- s nomLeu3.chr10 102728704 6 - 106955855 ataata-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55044622 6 + 59248254 acaata-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47148680 5 + 51301725 -caata-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45435516 5 + 49145316 --aata-c i calJac3.chr22 C 0 I 748 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=4755.000000 s hg38.chr19_GL949748v2_alt 151976 11 + 1064304 taatactaata s nomLeu3.chr10 102728710 10 - 106955855 -aaTAATAATA i nomLeu3.chr10 C 0 I 2356 s macFas5.chr19 55044628 10 + 59248254 -aataataata i macFas5.chr19 C 0 I 557 s papAnu2.chr19 47148685 10 + 51301725 -aataataata i papAnu2.chr19 C 0 I 171 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 151987 29 + 1064304 ctaatactaatactaatactaataataat e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e calJac3.chr22 45435521 748 + 49145316 I e nomLeu3.chr10 102728720 2356 - 106955855 I e chlSab2.chr6 46853904 636 + 50890351 I e papAnu2.chr19 47148695 171 + 51301725 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=16934.000000 s hg38.chr19_GL949748v2_alt 152016 106 + 1064304 aTCCTTCTTACTCCCAAAACTTACCCTTCCTGGGTCTTCCCCTTCCACATTTATCTAATTAAATTAAATTAAATTAATAATTATTTTTGTTTGttttttgtgtttt s ponAbe2.chr19 55962340 99 + 60714840 atccttcttactcccaaaacttactcctcctgggtcttccccttctACCTTTATCTaattaaattaaattaaattaa--attaTTTTTGtttgttgttt-----tt i ponAbe2.chr19 I 194 C 0 s papAnu2.chr19 47148866 94 + 51301725 ATCCTTCTTACTCCCAAAACTTACCCCTGCTGGGTCTTCCCCTTCCgcctt----taatttaatttaatt-gattaa--ttaattttggcttttttact-----tt i papAnu2.chr19 I 171 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e nomLeu3.chr10 102728720 2356 - 106955855 I e chlSab2.chr6 46853904 636 + 50890351 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=1113.000000 s hg38.chr19_GL949748v2_alt 152122 4 + 1064304 tttg s ponAbe2.chr19 55962439 4 + 60714840 tttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731076 4 - 106955855 TCCG i nomLeu3.chr10 I 2356 C 0 s papAnu2.chr19 47148960 4 + 51301725 ttta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=135518.000000 s hg38.chr19_GL949748v2_alt 152126 202 + 1064304 tttgtttgtttttgagacagagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgtctcccgggttcacaccattctcctgcctcagcctccccagtagctgggactacatgcacccgccgccacacccggctaattttttgtatttttagtagagacagggtttcaccgtgtta s ponAbe2.chr19 55962443 195 + 60714840 tttgtttgtttttgagaaagagtctcgctctatcacccaggctggagtgcagtggcgcgatcttggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagca-------ctacaggcgcccgccgccacactcggctaattttttgtatttttagtagagatggggtttcaccgtgtta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731080 202 - 106955855 TTAGtttgtttttgagacggagtctcgccctgtcacccacgctggagtgcagtgtcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgcgactacaggcgcccgctgccacacccggctaattttttgtatttttagtagagatggggtttcaccgtgtta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045195 186 + 59248254 tttattttattttgagacgaagtttcgctctgttgcccag----------------gtgatctcagctcactgcaacctctgcctcttgggttcaagtgattctcttgcctcagcctcctgagtagctgggattactggcgcctgccaccatgcccagctaattttctgtatttttagtagagaaggggtttctccatattg i macFas5.chr19 I 557 C 0 s papAnu2.chr19 47148964 195 + 51301725 ------tttttttgagatagagtctt-ttctgttacccaggctggagtgtagtggcgcgatctcagctcaccgcaagctctgcctcctgggttcatgctgttctcctgcctcagcctcccgagcagctgggactacaggcgcccgccacctcgcctggctaattttttgtatttttagtagagacggggtttcaccatgtta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=103734.000000 s hg38.chr19_GL949748v2_alt 152328 95 + 1064304 gccaggatggtcttgatc------tcctgacctt---gtgacccacccaccttggcctcccaaattgctgggattataggcatgagccaccgtgcccggc------------cTAt s panTro4.chr19 59085538 95 + 63644993 gccaggatggtcttgatc------tcctgacctt---gtgatccacccaccttggcctcccaaattgctgggattataggcatgagccaccgcgcccggc------------cTAt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55962638 92 + 60714840 gccaggatggtcttgatc------tcctgacctt---gtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccgcgcccggc------------c--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731282 95 - 106955855 gccaggatggtctcgatc------tcctgacctt---gtgatccacccacctcggcctcccaaaatgctgggattataggcatgagccaccgtgcccggc------------cTAt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045381 116 + 59248254 cccaggctggtcttcaccatattgccctgacctcaaagtgatccacctgcctgggcctcccaaattgctgggattacaggtgtgagccaccgcgcctggcTATGAGtttctacttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149159 95 + 51301725 gccaggatggtcttgatc------tcctgacctt---gtgatccgcccgtctcggcctcccaaagtgctgggattacagacgtgagccaccgcgcccagc------------ctgt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I a score=415521.000000 s hg38.chr19_GL949748v2_alt 152423 328 + 1064304 tttatttta--ttttgagacaaagtctctctctgttgcccaggt----------------gaccttggctcaccgcaacctccgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccatattgccctgacctcaagatgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccaccatgcctggcTATGAGTT-CTACTTCTGttttttttttttttttttttttttt s panTro4.chr19 59085633 317 + 63644993 tttatttta--ttttgagacaaagtctctctctgttgcccaggt----------------gacctcg-ctcactgcaacctccgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccatattgccctgacctcaagatgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccaccacgcctggcTATGAGTTTCTACttct-----------ttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55962730 308 + 60714840 --TAtttta--ttttgagacgaagtcttgctctgttgcccaggt----------------gacctcggctcactgcaacctctgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttcaccatattgcccaggctagtcttcaccatattgccctgacctcaaggtgatccacctgcctgggcc-cccaaactgctgggattacaagtgtgagccactgcacctggctATGAGtttctacttct------------------ttttttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731377 304 - 106955855 tttatttta--ttttgagacgaagtctcgctctattgcccaggt----------------gacctcggctcactgcaacttccgcctcccgggttcaag-tgattctcttgcctcagcttccctagtagctgggattataggcgcccgccaccacgcccggctaatttattgtatttttagtagagacggggtttctccatattgcccaggctggtcttcatcatattgccttgacctcaaggtgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccacc-------gcTATGAGtttctactttt------------------tttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045497 294 + 59248254 ttttttttt--ttttgagacggagtctcgctctgttgcctaggctggagtgcagtggcgagatgccggctccctgcaacctccacctcccgggttcaag-ccattctcctgcctcagcctcccgagtagctgggactacaggtgcgcaccaccacgcccaggtaattttttgtatttttagtagagatgtggttgcaccatgttaacaaggatggtctcaatc------tcctgacctc---gtgatccgcctgcctcggcttcccaaagtgttgggattacaggcgtgagccaccacgcccggcc------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149254 311 + 51301725 tttatttta--ttttgagacgaagtttcgctctgttgcccaggt----------------gacctcggctcactgcaacctccgcctcttgggttcaag-tgattctcttgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccagctaattttctgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccATATTGccctgacctcaaagtgatccacctgcctgggcctcccaaactgctgggattacaggtgtgagccaccgcgcctggctatgagtttctacttct------------------tttttttt i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45436269 268 + 49145316 tttattttagtttttgggatgaagtgtcgctcagtcgcccaggc----------------gacctcagctcactgcaacctccacctcctgggttcaagttgattctcttccttcagcctcctgtgtagctgggataacaggcaaccgtcactacgcccagctaactttttgtatttttagtagagaaggggttgcaccatattg------------------------ccctgacctc-aggcgattgacttgcctgggctacccaaaaggctgggattacaggcatgaaccacc-------------------TACtctt------------------ttgttc-- i calJac3.chr22 I 748 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I a score=52018.000000 s hg38.chr19_GL949748v2_alt 152751 24 + 1064304 ttttttttttgagacggagtctcg s panTro4.chr19 59085950 24 + 63644993 tttcttttttgagacggagtctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963038 24 + 60714840 ttttttttttgagacggagtgtcg i ponAbe2.chr19 C 0 I 2 s nomLeu3.chr10 102731681 24 - 106955855 ttttttttttgagacagagtctcg i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60022230 24 + 64156825 tttttcttttgagacaaagtctcg i rheMac3.chr19 I 1075 I 2 s macFas5.chr19 55045791 24 + 59248254 tttttcttttgagacaaagtctcg i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47149567 24 + 51301725 ttttttttttgagacggagtctcg i papAnu2.chr19 I 2 I 293 s calJac3.chr22 45436537 24 + 49145316 gtttgtttttgagacagagtcttg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I a score=78679.000000 s hg38.chr19_GL949748v2_alt 152775 42 + 1064304 ctgtcgcccaggctggagtgcagtggcgagatcccagctccc s panTro4.chr19 59085974 42 + 63644993 ctgtcgcccaggttgcagtgcagtggcgacatcccggctccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963064 42 + 60714840 ctgtcgcccaggctggagtgcagtggcgagatcctggttccc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 102731707 42 - 106955855 ctgttgcccagactggagtgcagtggcgagatcctggctccc i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60022256 42 + 64156825 ctgtcgctcagggtggagtgcagtggcatgatctcaggtcac i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55045817 42 + 59248254 ctgtcgctcagggtggagtgcagtggcatgatctcaggtcac i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47149884 42 + 51301725 ctgtcactcaaggtggagtgcagtggcatgatctcaggtcac i papAnu2.chr19 I 293 C 0 s calJac3.chr22 45436561 41 + 49145316 ctgtcgc-caggctggagtgcagtggcacaatctcggctcac i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I a score=403425.000000 s hg38.chr19_GL949748v2_alt 152817 149 + 1064304 tgcaacctctgcctcccgggttcaagccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacaccagggtaa-ttttttgtatttttagtagagacagcatgtcaccatgttggtcaggctggtctcgaac s panTro4.chr19 59086016 149 + 63644993 tgcaacctctgcctcccaggttcaggccattctcctgccccagcctcccgagtagctgggactacaggcacgcgccaccacaccagggtaa-ttttttgtatttttagtagagacagcgtgtcaccatgttggtcaggctggtctcgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963106 149 + 60714840 tgcaacctctgcctcccgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcatgcagcaccacacctggctaa-ttttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtctcgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731749 150 - 106955855 tgcaacctccgcctcccgggttcaagccattctcctgcctcagcctcctgagtagctgggactacaggcatgcaccaccacaccagggtaatttttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtcttgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60022298 147 + 64156825 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttggatttttagtagagacagggtttcaccatgctggttaggctggtcttgaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55045859 147 + 59248254 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149926 147 + 51301725 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46854540 147 + 50890351 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcaccagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i chlSab2.chr6 I 636 C 0 s calJac3.chr22 45436602 148 + 49145316 tgtaacctctgcctcccaggttcaagcgattttcctgcctcagcctcctgagtagcttagactacaggcgcgcgccaccatgcccagctaa--tttttgtatttttggtagagacagagtttcaccatgttggccaagatggtctcgatc i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I a score=1580714.000000 s hg38.chr19_GL949748v2_alt 152966 499 + 1064304 tcctgacctcatgatccacctgcttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgcacccgg-c-tgagtttctgcttctaaaggctgcacagataacagtgtcaagcacagagtctccactcgagaaatattggAAGAATGAAAAACaataaaaatgaatacacagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcacatttagtccttctatctacctatgaaaccagtaataaatagcattcactccattcaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggacggccaagattccaggaaggctggctattgagtccACAGGACTCAGTACATTGCTTCTGCTGAGTGAGGctgactttacagaagtagcaa-------------ctgaggccccgagagggggaacgattttacacc----ggcatgctgccactataattagaggcagggcaaaacca s panTro4.chr19 59086165 512 + 63644993 ccctgacctcatgatccacctgcttgggcctcccaaagtgctggg--attccaggc--atgagctgccgcgcccgg-c-tgagtttctgcttctaaaggctgcacagataacagtgtcaagcacagagtctccactcgagaaatattggAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcacatttagtccttctatctacctatgaaaccagtaataaatagcattcactccattcaacacttgaggcaactaagaggtcaactaactcctcaaggtgtctccgtaacctggacggccaagattccaggaaggctggctattgagtccACAGGACTCAGTACATTGCTTCTGCTGAGTGAGGCTGACTTTACAGAAGTAGAAAacagaagtagaaactgaggccccgagagggggaacgattttacacc----ggcatgctgccactataattagaggcagggcAAAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963255 500 + 60714840 tcctgacctcataatccacctgcttgggcctcccaaagtgctggg--attccagga--gtgagctgccacgcccggcc-tgagtttctgcttctaaaggctgcacagataacaatgtcaagcacagagtctccactcaagaaatattggAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcaggcctcacattaaatacacttcacattttatcacatttagtccttctatctacccgtgaaaccagtaataaatagcattaactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggacggccaagattccaggaaggctggctattgagtccACAAGACTCAGTACATTGCTTCTGTTGAGTCAGGctgactttacagaagtagaaa-------------cggaggccccgagagggggaacgattttacacc----agcatgctgccactataattagaggcagggcAAAACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731899 498 - 106955855 tcctgacctcatgatccacctgcttgggcctcccaaaatgctggg--attccaggc--ctgagctgtcgcgcccggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAATAATGTCAAGCACAGAGTCTCCATTCAATAAATATT-GAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcatgcctcacattaaatacatttcacattttatcacattcagtccttctatctacctatgaaaccagtaataaatagcattaactccatttaacacttgaggaaactaagaggtcaactaactcctcaaggtttctccataacctggacagccaagattccaggaa-gctgcctattgagtccACAGGACTCAGTACATTGCTTCTGTTGAGGGAGGctgactttacagaagtagaaa-------------ctgaggcccggagagggggaacgattttacacc----agcatgcggccactataattagaggcacggtaaaacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60022445 498 + 64156825 tcctgacctcatgatccacccacttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgtgcctggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATTAAGCGCAGAATCTCCACTCAAGAAATACTGGAAGAATGAAAAACaataaaaacgaatacgtagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagttcttctatctacctatgacaccagtaataaatagcattcactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagagggggaatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55046006 498 + 59248254 tcctgacctcatgatccacccacttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgtgcctggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATTAAGCGCAGAGTCTCCACTCAAGAAATACTGGAAGAATGAAAAACaataaaaacgaatacgtagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagtccttctatctacctatgacaccagtaataaatagcattcactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagagggggaatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47150073 498 + 51301725 tcctgacctcatgatccacccgcttgggcctcccaaagtgctggg--attccaggc--gcgaGCTGCCGTGCCCGGCC-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATCAAGCGCAGAGTCTCCACTCAAGAAATActagaagaatgaaaaacaataaaaacgaATACGTAGCACGCACTTACCTGTCAGGCCTCACATTAAATACATTTCACATTTTATCGCATTTAGTCCTTCTATCTACCTATGACACCAGTAATAAATAGTATTAACTCCATTTAACACTTGAGGCAACTAAGAGGTCAACTAACTCCTCAAGGTTTCTTCATAACCTGGATGGCCAAGATTCCAGGAAGGCTGGCTGTTGAGTCCACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGCTGACTTTACAGAagtagaaa-------------ctgaggcccagagagggggaATGGTTTTACACC----AGCATGCTGCCAC--TAATCAGAGGCAGGGCAAAACCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46854687 498 + 50890351 tcctgacctcgtgatccacccgcctgggcctcccaaagtgctggg--attccaggc--gcgagctgccgtgcccggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATCAAGTGCAGAGTCTCCACTCAAGAAATACTGGAAGACTGAAAAACaataaaaacgaatatgtagcatgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagtcattctatctacctatgacaccagtaataaatagcattaactccatttaacacttgaggcaactaagaagttaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagaggcgggatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45436750 487 + 49145316 tcttgacctcgtgatccacccgcctcggcctcccaaagtgctggg--attacgggc--ttgggc--caAAGCACGGCCATGAGTTTCTACTTAC-AAGGCTGCGCCAAAAACAACGTCTAGC----AGTCTTCACTCAAGAAACATTGGAAGAATGAAAAAAaataaaaactaatagatggcaggcacttacctgtcaggcctcacattaaatacatttcacattctatcgcatttaatcattttatctacctatgaaaccagtaataaaaagcattaactccgttgaatattcgaggcaaccaagaggtcaactaacttctcagggtttctccatcacctagacggctgaaattccaggaaggctggctactgagtccACAGGTCTCAG----TTGCTTCTGTAGACTAAGGctgactttacagaagtagaaa-------------ccgaggctccatgatggggaacta-tttacacc----agcgtgctgccac--taattagaggcagggcaaaacca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19641867 472 - 122678785 TCCTGACCTCAT-------CTGCT---GGTTCTGGGAAagctgagtaacactaggcaggttacctaaccctctgagcc-tcag-ttctacatcataaggttgtaaacatagcagtatctggcacaaagttttcactcaagaaatataagatgaatgatggaa---aAAATCTAATGTATGGT-CACACCCACCTGGCGGGCCCCACAGTGACTACATTTCACACTttatctcccttcatcctcacatcaaactatgaagcaggtaac----atcatgacccccattcaggagttgaggacac----aggtcagctcattcattaaggtttctctgtagttggtagggccaagattccagaaagtctgacca--gagtccatAGGATTCAGTACATTGCTTCTGTCGAATGAGGTTGACAGGacggaagtagaaa-------------ctgaggcccagagagggggaatgatttacctcccagaggaatgc--------gaatcaatggcagggcaaca--- i canFam3.chr1 I 2038 C 0 e mm10.chr7 3678989 4687 + 145441459 I a score=5011941.000000 s hg38.chr19_GL949748v2_alt 153465 1304 + 1064304 ggctaaacaaactacaattcccatgAGCCTCCGGGGGCAGGGGCCCAGCCAGGGACGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCTGCAGTGTCACCTGAGACTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGACTTGCTAGGGCAGCAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGTAGGAAGGTGGGTGG-GCTGGGTGGTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCCGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAACTCAG-TATATTCAGAGAAGCCGCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAATGCCTAGGATGTTTAGAAAGG-CTTT---TAGGAAGGGGCTTTT----TTCCTGGTCGCAGT-GATTATTGGAGAAGTGTCACCTCTAGCAATA-CAGTGGCTCCCTCATCACTCATGTCGACAGCCCCAGCAGTGGGAAACACT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACAGGAGGGGAGCCATCCTTTAGGAGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCCCGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGTCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG s panTro4.chr19 59086677 1303 + 63644993 GGCTAAACAAACTACAATTCCCATGAGCCTCCGGGG-CAGGGGCCCAGCCAGGGACACTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCCGCAGTGTCACCTGAGACTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGTAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGAAGGTGGGTGG-GCTGGGTGGTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCCACCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCGCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGGCTTTT----TTCCTGGTCGCAGT-GATTATTGGAGAAGTGTCACCTCTAGCAATA-CAGTGGCTCCCTCATCACTCATGTCGACAGCCCCAGCAGTGGGAAACATT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACAGGAGGGGAGCCATCCTTTAGGAGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGTCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963755 1304 + 60714840 GGCTAAACAAACTACAATTCCCATGAGCCTCCGGGG-CAGGGGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCCTGCTGGTAGATGTAGTTCTGCAGTGTCACCTGAGGCTGGGAGGGCTGACTCACCGCAGGACGTAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACTGG-----------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCGCTCCCAACGCCTGCTAGTGTCCCAGCCCCAGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGAGTTGCTAGGGCAACAAGGGAGGGTGGCC--GAGGGTGCCTGC--AGGGGGGGAAGATGGGTGG-GCCGGGTGCTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATAGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------GT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCTTCAAGGATGGTCCCTTCTAAATTGTG-GAACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGTATTCCTTAGCAACAAGGCCTAGGATATTTAGAAAGG-CTTT---TAGAAAGGGGCTTTT----TTCCTGGTCGCAGT-GACTGTCGGAGAAGTGTCGCCTCTAGCAATA-CAGTGGCTCCCTCATCACTGGTGTCGACAGCCCCAGCAGTGGCAAACACT----GGCCCATATGAAGCCTTGGTGGCGTCTGATGACGGGAAGGGAGCCATCCTTTAGGGGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAAGTCACGTGGGGGT-------GTCACTACCCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGA-GGGAAAGCTGACTGCAGCTGCCAGGAACACAAGGGCAGTCTACTCCCGGTTGCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102732397 1296 - 106955855 ggctaaacaaactacaattcccatgagcttccGGAG-CAGGGGCCCAGCCAGGGGAGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCTGCAGTGTCACCTGAGGCTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGTAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGATGCCTGCTAGTGTCCCAGCCCCGGATGCTAACGAAGGGATCCTGGCCAGGCAATCGCCCTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AAGGGAGGAAGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATGGGGTTCTTCCTCTTTTGCTACCTAATAGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCGAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATTGTC-AGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCTATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGGCTTTC----TTCCTGGGCGCAGT-GATTGTTGGAGAAGTGTCGCCTCTAGCAATA-CAGTGGCTCCCTCATCACTTGTGTCGACAGCCCCAGCACTGGGAAACATT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACGGGAGGGGAGCCATCCTTTACGGGTGAGGACCGAACAGATTTAGAAAAACCTTCAACTCCTGCTTGGCTTTACTAGGGGG--CATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCACGTGGGGCT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGT---GACTAGGGG----C-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCAACGGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGAAAGGCTGACTGCAGCTGCCAGGAACAGAAGGGCAGTCTACTCCTGGCTGCCGG i nomLeu3.chr10 C 0 M 811 s rheMac3.chr19 60022943 1300 + 64156825 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCTCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGGGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGTTGG-GCCAGGTGGTACAGTTCACTGACAATGGGCTGCTGCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATGTTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCATGCCGACAGCCCCAGCAGTGGGAAACGTT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACGCAAGAGCAGTCTACTCCTGGTTGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55046504 1300 + 59248254 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGTTGG-GCCGGGTGGTACAGTTCACTGACAATGGGCTGCTTCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATGTTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTAGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATG-CAGTGGTTCCCTCGTCACTCATGCCGACAGCCCCAGCAGTGGGAAACGTT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACACAAGAGCAGTCTACTCCTGGTTGCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47150571 1296 + 51301725 GGCTAAACAAACTACAACTCCCATGAGCCTCTGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT--------------GGGGGTGGAGGATGAGGGTA-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATgggcttcttcttcttttggtaCCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TGTATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACGTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCGTGCCGACAGCCCCAGCACTGGGAAAC-------GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTAGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTGTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGATGGGCTGTTCCCCCAGCAGCAGTCCAAGCCCCTGG-GGGAAGTCTGACTGCAGCTGCGAGGAACACAAGGGCCGTCTACTCCTGGTTGCCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46855185 1302 + 50890351 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCCGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCACCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCTGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGTAGAGGGGAGGGCGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATGGGCTTCTTCTTCTTTTGGTACCTAATGGAGCCTGCCGCAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCACCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTGGAAAGG-CTTTTTCTTGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCGTGCCGACAGCCCCAGCAGTGGGAAAC-------GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGGTCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45437237 1282 + 49145316 ggctaaacaaactacaactcccgtgAGCCTCCGGGG-CAGGGGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGCGGTTCTGTAGCGTC-CCTGAGGCTGGGCGGGCTCACTCACCGCAGCACATAGGAGCGGGTCGGTGCGCTCTTGTAGATGTACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCCTCGCGCACCCGCGTGCAGAAATCCGTGCCATAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT--------------GGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAGTGGCCCTCTGGCTGTCAGATTTGCTAGGGCGACAAGGGAGGGTGGCCGAGAGGGTGCCTGT---CGGGAGGAGGAGGGGTGG-GCCGGGTGGTACTGCTCACCGACAGCGGGGTTCTTCTTGCTTTGGTAACTAACGGGGCCTGCCAGAGCCATGAAAAGCCTTGAAGGGC--TGCTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAACTATT-GGACACTGCTGTTGCTAGGGAAG-------TATCTTCCCTAATAACACGATGATTCACGGTTGCTAGGGAGATGTTCCAGTCGCCAGTGGGGTCTTAATGATCTCTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAGGGCCCAGGATGTTTAGAAAGG-CTTT---TAAAAAAGGGCTTTT----TTCCTGGTCCCAGC-AA----TGTCGAAGTGTCACCCCTAGCAATA-CAGTGGCTCTGTCGTCACTCGTGCCAATAGCCCCAGCAGTGGGAAACGCT----GGCCCACATGAAGACCTGGTGGCCTCTGATGATGGGAGGGGAGCCAT-CTTGAGGAGTGGGGGCCAAGTGGATTTAGCAAAGCCTTCAATTCCTGCTTGGCTTTTCTGGGGGGGACATCCTATCTCTAGCAGCTAGAG-TCAGGGCATGGTTATCAGGGCAGTGGTCATAAACTCACGTGGGGGT-------ATCACTA-CCCCCACAACC-AATGGCAGTTTT---CGACTAGGGATGGCA-----CAACCCTAGCAGGG---GATAGTTCATCATTTACATCAACAGGCTGCTGCCCCAGCCACAGTCCAAG-CCCTGG-GGGAAGGCTAACTGCAGCTGCCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3683676 1222 + 145441459 GGCCCAAGAAACTACAATTTCCATAAGCCTTGGGCC-TTAGGGCCCAGCTAGAGAAGCCCCAGACTACCACAGGTCAGTCATACTGGCAGATAAAGTTCTGCACTGTC-TCTGATACCAGGTGGGCTCCCTCACCTCAAAACGTAGGAGCGGAAAGGTGCGCTCTTGTAGATGTACTGTGCCAGCCACCACTGCACGGTCATGTTCCAGTATCGCATGCCATCCCGCACACGCACGCAGAAGTCTGTGCCATAGCAGTCGATGTTACGGATGGTCTCATAGTCATACTCCAGGGAAGCTGCAATCTCCGGACt--------------gggggtgg-gggtgggggtggagatgaggatggggACAGACATGCAGCTCAGCCAGGCCC-CTCCTGACACCTGCTTCTGTCCCAGCCC--GATGCTAAAGAGGGGGTTCTGGACAGGCTGT----------------GACTTTTGAGGGCCACTGGGTAGGATAGGCCAGAGGGAGTCGGG--------------TAGGTGG--------GGCACAATTCACTAATAGTG------CTGTGCTCTTGGTAACTAGTAGGGCCTGATACAGCCACAGAAATCCTTGGAGAGCTATGGTTGCTAAGCTATCAAGTCCA-------------------------------------------------CT-GGCAACCAAGCTCAGAAATATTGAGAATAGCTTCCAAGTATGGTCCCTTCTGAACTGTG-GGGCAGAGCAGCTGCCAGTAAAGT----------ATCCACTCTAAAAAGGTGGTTCACGGTTGCTAGGGAGATATTCTAGGCCTCG--TGACTCTCAATGATCTCTGTTGCTAGGGAAAAGGCATTCCTTAGCAACAAGGCCCAGGCTGTTCAGAAAAATCTTT---TCAGAAAGGACTTCT----TCCCTGGTCCCTTTCGATTGTTCGAGAAGTGTCCCCTCCAGAAATATCAGAGGTTTTCAGATCTCCGACACCCATACTGTCAGCTATCGATAAAGATGCTAGGCCTATGTGAATGTTCAGCGTCTTCTGGACATGGGAGGGGGACT---------------------TGTAGATTTAAAACAGCATTTAATCTCTGCCTGACTTCACT-GCAGG-ACACCCTCCCTCTAGCAGTGAGTGGTTGATCCATGGTTACTAGGGCAGTGGTAATCAGTTTATATGGGGTGGGGGGCAGCCATTA-CCAC--CAACAGGATAA-------TGACAACCGGGGA-GATA-----CAACCCTACCAAGG---AGTGATCTACAATTTA---GGAGAGGCTG------------CAGTCCCATTCCCCAGCAGGAAGGCTGACAATGGATTCTAGAGACG--------GTTCACTACTGGTTGCTAG i mm10.chr7 I 4687 C 0 s canFam3.chr1 19642339 1336 - 122678785 gcctccagaaactacaactcccgtgactcTATTGGG-AGGAGGCCCGACCGCGGAGCCGGCAGGCAGCCCCAA----GTGCTGCCGGAAGATGTAGTTCCG-AGTTTT-CCCAAGGCGGGCGGG-----CTCACCTGAGAACATAGGAGCGGGCAGGTGCGCTCTTGTAGATATACTGTGCCAGCCACCACTGCACTGTCATGTTCCAGTACCGCATGCCATCCCGCACCCGCACGCAGAAGTCAGTGCCATAGCAGTCGATGTTGCGGATGGTCTCATAGTCGTACTCCAGGGAAGCCGCCTTCTCCGGACTGGGGGTGGGGGGTGGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCTGGCTACTGTCCTAGCCCCAGACACTCAGGAGGGGATCACGGCCAGGCAATAGC--TCTGGCTGTCACATTTGCTAGGGCAACAGGGTTGGGGC-----GGGGGGGCTTTT--CCGGGACTAAGACTAGTGGAGGTGAGGGGCACAGTTCACTGACAATGGGG---TCCTCCTCTTGGTAAC-----AGGGCTGCAACAGCAAGGAAGAGCCTGGAAGAGCTACAGTTGCTAAGCTAT-GAGTCCTTAGCAACCTGATCCTTCACTGGTCTCTGATGCTAGGGAAAGGCCATTCCTT-AGCAACCAAGCTCAC-TATATTCCGAGAAGCTTCCAAGTATGGTCCCTTCTAAGTGGGGAAGATACTGTGGTTGCTAGGGAAG-------TAGCATTCCTAACAATGAGGTGGTCTGTGGTTGCTAGGGAGATGTTCT-GACCCATGTGACACCAGGACAGTCTCTGTTGCTAGAAAAAGGGCATTCCTTAGCAAAAAGGCCTGGGATGTTTAGAAATG-CTTC---CAGAAAGGGCCTTTCCTGGTTATTGGTCCTA-T-GATGACTTAAGAAGTGTCATCTCCAGCAACA-CGGTGGTTCCTGGATCCCTGGTGTCAACATCCCCAACAGTGGTGAACATTCTG-CACCCATCTGAGCCGTTGGTAGTTTCTGATAATGGGATGGGAGCCATCTATTAAAAGTGGGG-CTCAGTAGATTTAGAAAAGCCTTCAGTTTCTGCTTGACATTTTCTGGGAG-ACA--CTCTCTCTAGTAACTGGAGGTCCACTCGTGGTTACCAGGGCAGTGGCTG-AAATTCGTTTGGGGGT-------GCTACTT-CCCCCTTAATGGAATGGCTGTCTGTGACTACTAGGGG----ATGCCCCAATCCGGGCAAGG---AGGAATTCATAATTTACATAGACAGGCTGCTTTGCC-----CAGCCTCAGCCCCAGG-TAGAAGGCCACCCATGTTTGCTAGGAACAGTGGGGCAGTCCATTCCCAGTTGCTAG i canFam3.chr1 C 0 C 0 a score=464674.000000 s hg38.chr19_GL949748v2_alt 154769 183 + 1064304 GGGTGCCATCTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCCG---------GGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CTGTAGTT s panTro4.chr19 59087980 183 + 63644993 GGGTGCCATCTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCTG---------GGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCACAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGGGTAA-------CTGTAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965059 183 + 60714840 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAGGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCTA---------GGGGGTGGAGCCTCTCTGGCAACCAGGGTCAACCCGTAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGACA-------CTGTAGTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60024243 190 + 64156825 GGGTGCCATTTCCCTAGCAACACGGGGGCAATGCTTCCTTAGCCACAAGAGAGTCCACAGCTA-CGGC-------CGTGCTACTTGCCTAGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTGGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55047804 190 + 59248254 GGGTGCCATTTCCCTAGCAACACGGGGGCAATGCTTCCTTAGCCACAAGAGAGTCCACAGCTA-CGGC-------CGTGCTACTTGCCTAGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTAGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47151867 196 + 51301725 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGTCACAAGAGAGTCCACAGCTA-TGGCCGTGCTACGTGCTACTTGCCTAGCAATACCggtgctgg--ggggt-gggggtggagccTCTCTGGCAACAAGGGTCAACCCATAGTTACCACGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCATAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46856487 190 + 50890351 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCTGCTTGCCTTGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTAGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45438519 181 + 49145316 GGGTGCCATTTCCCTAGCAACACAGGGGCAATACTTCCTCAGCCACAGGAGAGCCCACAGGTG-TGGC-------CATGCGACTTGCCTAGCGATGCCGGT--TG---------GGGCATGCAGCCTCTCTGAAAACTAGGGTCAACCCATAGTCACCAGGGGGAGGCCTGGCTTCCTTAGCAACAGTATAA-------CTGGAGTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3684898 157 + 145441459 GGATACCATTTCCCTATCAACA-AGGACTGATGCTTGCTAAGTAGTAAGAA---CCGTAGTTACTAGT-------TTTGTGACGTTCTCAGCTATGATGGCGCTG---------GCGCTTGGGGTAGCTTTACTGGTAAAGGGAAAGCCTCAGCAATCGGGG-----------------------AAGACAA-------CCGTGGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19643675 187 - 122678785 GAGCATCATTTCCCTAGCAACACAGGGGCAACACTTCCTTAGCAACAAGAT-GCCCCTAGTTACTGGC-------AGTGTGACCTACCCAACAACTAAAGAAAGGGGTGAGGTGAGGGCTGCAGCAT---TGCCAACAA-GGTCACTCCATAGTTACCAGGGTATG--------TCCTTGGCAACGGTAGGAAAGTGACCTGCGGTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102733693 811 - 106955855 M a score=1804407.000000 s hg38.chr19_GL949748v2_alt 154952 529 + 1064304 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCTGCTATGTGAGGACATCCCAC--GGGGTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGAGTGCCGTATCTGCAGCAAC--AGAGCAAAACTTCTGGTAAAAAGGAGGTGAGCTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGTGGCGTTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTCTGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCACACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----ATCTTTTCCCTACCGACAGGGGCTGGCAGGCCATGGTTGCCGAGGGGGCGACAC s panTro4.chr19 59088163 529 + 63644993 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCCGCTATGTGAGGACATCCCAC--GGGGTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGAGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGTAAAAAGGAGGTGAGCTACTGTTGCCAGGGATCCTGCTTCCCTAGCAAATAGTGGCATTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTCTGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCACACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGCCAGTACCAGGG----ATCTTTTCCCCACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965242 529 + 60714840 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCTGCTATGTGACGACATCCCAC--GGGCTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGGGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGTGGCGTTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTACGTGGCAACAGAGGGTTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTAAGGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102734504 514 - 106955855 GGTAGGAATGGC-TGCCCTCT---GC-T-GGGAACAGCACTGGGCAGGGATT-GAAATCGCTATTTCCTTG----CAGAGGGCT----------GCTATGTGAGGACATCTGAC--GGGGTGGAGCA---GTGCTACCTCCTAGCAACAAAAG-GGGCAGTGCAGGGGGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAACAGTGGCGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCTGGGGGGGTGACACTTGCGTGGCAACAGAGGTGTGGCACAGGGT---TAAGTCACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGTGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCTGTGGTTGCCAAGGGGGCGACA- i nomLeu3.chr10 M 811 C 0 s rheMac3.chr19 60024433 535 + 64156825 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCACATGGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GTGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTCCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTGTTCC-GTTGCTAGGGAACCGTTTACCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55047994 535 + 59248254 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCACATGGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTCCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i macFas5.chr19 C 0 I 6096 s papAnu2.chr19 47152063 533 + 51301725 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCTTTGCAAACAGAGGGCAGCTGAGggctgccatgtgaggatatcCCAC--GGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTgcagcaac--agagcaaaacttctGGCAAAAAGGAGGTGAAGTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTATTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAGGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGTCGTGGTTGCCAAGGGGGCGACAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46856677 532 + 50890351 GGTAGGAATGG-ATGCCCTCT---GC-TAGGGAACAGCGCTGGTCGGAGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCAC--GGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAACAGCAGTGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAGAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGATGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGTCGTGGTTGCCAAGGGGGCGACAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45438700 490 + 49145316 GCTAGGAATGGCATCAGCTCT---GC-TGGGTAACAGCA---GGTGGGGATTTGAAATTGCTATTTCCTTT----CAAAGAGC--------GCAGCTACTTGACCACATCCCAT--GAGATGGAGGA---GGGCTAGCTCCTAGAAAC-AGAG-GGGTGGTGCAGGGGGTGCCGTATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAGAAGGAGGTGAACTACTGTTGCTAGGGACCCTGCTTCCCTGGCAG--AGTGGTGTTCG-GTTGCTAGGTAACTGTTTCCCTAGCAACAGAGGGT-GA---CCCGCCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT--GGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGTGTTGCTAAGTTACCA----CATTTTCCTAGCAATGCGGGGGGGGGGTTCAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCATTACCAGGG--TTTTTTTTTCCCTATCGACAG----------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3685055 503 + 145441459 GCTGAGAAAGG--TGCTCTCCACAGC-TGGAGGAGAGCA---GCCAAAGAT--------GTTACTTCCTTACA--AATAGGGCAACTGGGAGGTGCTGTGTGAGAACATCCCAT--GG---TGAGC-----TGCTCGCTCTAAGCAAG-GCAG---GCAGTTCA--------CAAACAGGCACAAAC----AGCAGGGCTCTCAGCAGTAAG-----GAACCAAGGTTGCTAGGGATATAGCATTCTCAGCACA-GGGGCTGTTCA-ATTGCTAAGGAATGGTTTCCCTAAACACAGATGATGGA---CCCACTACTACCAAAGGATAGTATCTCTAGCAACTGGGAACAGCCTGGATCT--TGGGGTGACTCTTCCATAGCAACACAGGGTAAGCATGTGGTTGCTAAGATACTATTTTCCTTTCCCTAGCAATAGAGGA--------CAATTAGCCATACTGAGGGGTGACAAAT----GCAACAAGGGGCAATCTGTAGGTACCAGAAACACATAGTTTCCCTAGTGGCCAGGGAAGGCAGGTGATAGTCACCAGGGGGGCAATAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19643862 502 - 122678785 GCTAGGAGTGCCATCCCCTCT---GTGCAGAGGGCAGCA-TGGTCAGGGAT--------GCCATTTGCTTA----GAAGGTGCA------GGCTGCT-----AGTACAGCCCAT--GGTTGGGTGTGTGTGTGCTGGCTTCTAGCCAC-AGAGAGAGGTTTAAAGGGGATGCTATTTACACAGCAATGAAAAGCAAGTCTTGTGGCTGGAAGG-GGCAGGCCACGGTTACTAGGGA-AGTGCTTCTCTGGCATAGAGGGGCAGTCTAGTTGCCAGGGTACCATTTCCCTAGCAACAAAGGGT-GGGGCCCCATCACAGCCCAAAGATGGTATCTGGAGTAACCAGGAACAACCGAGTTAC--CAGGGTAACACTTCCATGGCAACAGAAGGGCAGTGCATGGTTGCTAAAAGACCATCTTCCCTCTCCTAACAACAGAGAG--------CAGTTCGCCATCCCAAGAGGTGACAAGCAGTAGC-ACAAGGGGC-AGTGGAAGGTATGGGGA----GTATTGCTCCCTAGGACAGGGGTAGGT------------------GGGCGACAC i canFam3.chr1 C 0 C 0 a score=171233.000000 s hg38.chr19_GL949748v2_alt 155481 59 + 1064304 TCTGCTCA---AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCGGCTAGGGG s panTro4.chr19 59088692 59 + 63644993 TCTGCTAA---AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965771 60 + 60714840 TCTGCTAA-C-AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735018 56 - 106955855 -CTGCT-----AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60024968 61 + 64156825 TCTGCTAA-CAAAAAGATGGTGGCCCTAGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47152596 61 + 51301725 TCTGCTAA-CAAAAAGATGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857209 61 + 50890351 TCAGCTAA-CAAAAAGATGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45439190 58 + 49145316 ----CTAAACAAAAGGGTGGTATCCCTGCCCCCTTACTCCCCGCTCTCCTCCCTGCTAGGGG i calJac3.chr22 C 0 I 584 s mm10.chr7 3685558 52 + 145441459 GCTGCCAA-C-CACTGCTGGTAGCCC--------TACACCCTGCTCCCTTCCCTACTAGGGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19644364 60 - 122678785 TCTTCTGA-C-AACAGGTGATGAACCTGCTCCCTTGCTCCCCACTCTCCTCCCTGCTAGGGG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=1522570.000000 s hg38.chr19_GL949748v2_alt 155540 371 + 1064304 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAggcgggcgggcagcgggcgggcgTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACTGCCCC s panTro4.chr19 59088751 371 + 63644993 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACCGCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965831 371 + 60714840 CAGAGCCTGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCGTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAAGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735074 371 - 106955855 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTAGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCAGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGACGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60025029 371 + 64156825 CAGAGCCAGCCCTGGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggcTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGACGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i rheMac3.chr19 C 0 I 1155 s papAnu2.chr19 47152657 371 + 51301725 CAGAGCCAGCCCttggaggtgggggctgctggGTCTTGGGAAGCCTCCCTCGCACCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCgggaagaggtgggaggagagcaGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857270 371 + 50890351 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGGGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45439832 371 + 49145316 CAGAGCCAGCCCTTGGAGGTGGGGGCCGCTGGGTCTTGGGAAGCCTCCCTCCCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCACCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAACAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGAGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i calJac3.chr22 I 584 C 0 s mm10.chr7 3685610 371 + 145441459 CAGAGCCAACCCTTGGTGGTGGGGCCTGCTGGGTCTTGGGAAGCCTCCCTCCCGCCGCCTGACCTGCTAGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggcTTTGGCAGCCACAGGGTAGGCCCCGAAGCCCGCGGCAATGCAACCGCACTCGGCCGCAATCCAGGCAACGTAGAAGCGCATGCGGAAGGCGAAGAAGACCGGGATCATGTAGAAGAGGCGGGTGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCACGCACAGCTTCCAGTGGGAAGAGATGGGAGGACAGCAGGAAGAGCAGGCCAAAGAGCGGGGCTGGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTGGGCACGGCTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19644424 371 - 122678785 CATGACCAGCCTGTGGTGATGGGGCCTGCCGGGTCTTGGGAAGCCTCCCTCCCACTGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggccTTGGCGGCCACAGGGTAGGCCCCGAAGCCGGCAGCAATGCAGCCGCACTCAGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGAATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGTGAGGACAGCAGGAATAGCAGCCCGAAGAGGGGGGCCGGCCAGGCTCGGCGCAGGAGGGGCCGCAGGCTGGGCACGGCTCC i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=572975.000000 s hg38.chr19_GL949748v2_alt 155911 276 + 1064304 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGACAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGAGGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACTGAGACCCTGAGAGATGGGGATAAGGAACGAGAGACAGGGGGGACAAGAA-ACTCAGagagacagagacagtaa s panTro4.chr19 59089122 274 + 63644993 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGACAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGACGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACAGAGACCCTGAGAGATGGGGATAAGGAACGAGAGACA--GGGGACAAGAA-ACTCAGAGAGACAGAGACAGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966202 275 + 60714840 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGCGCAGAGCTCAAGTCTG-----CAggag----gaggagagggagct-tggaaggaaggtgggagga--------gggagtgag-ggggcagagactgggcgcc-ggggagaccccaagggtagg--gacagagagcctgagagatggggataaggaacgagaggcagggaggACAAGAA-ACTCAGagagacagagacagtga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735445 275 - 106955855 GGGGAAGGGCTGCTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGAGAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGAGGGACAGAGA-TGGGCGCC-GGGGAGGCCCCAAGGGTAGG--GACAGAGACCCTGAGAGATGGGGATAAGGAAAGAGAGACAGGGGGGACAAGAA-ACTCAGAGAGACAGAGACAGTGA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153028 275 + 51301725 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-CGTCAGA--------------------CA----------GGCAGCTGGGCAGAGCTCCAGtctg-----caggag----gaggagagggagct-tggagggaaggtgggaaga--------gggagagagaggggcagagactgggcgcc-ggggagaccccaggggtagg--gacagagacccagagagatggGGATAAGGAACgagagaca-gggggacaagaa-actcagagagacagagacagtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857641 271 + 50890351 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-CGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCTAGTCTG-----C---AG----GAGGAGAGGGAGCT-TGGAGGGAAGGTGGGAAGA--------GGGAGAGAGAGGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACAGAGACCCAGAGAGATGGGGATAAGGAACGAGAGACA--GGGGACAAGAA-ACTCAGAGAGACAGAGACAGtga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440203 269 + 49145316 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGTCAGGGAGGGAGGGCAGC-AGTCAGA--------------------TG----------GGCAGGTGGGCAGAGCTCGAGTCTG-----C---AG----GAGGAGAAAGAGCT-TGGAGGGCAGGTGGGAAGA--------GGAATAGAGA--GGCAGACACTGGGTGCCGGGGGAAACCCcaggggtagg--gacagagacccagagagatggggacaaggaaggagatg----ggggacaacaagactcggagagacagagacagtga i calJac3.chr22 C 0 C 0 s mm10.chr7 3685981 286 + 145441459 CGGGAAGGGCTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGT----GGAGGGTGGCAAGGAGCAGGT-GGTTGGATGCTGTGTATCTGAGCCTACTg----------gggaggtgg---gaggtgaaa---g-----gaggag----gaggatggagagat-gggaaaaggggggaggaga--------gtaagcagaagagttggggacagaa-----ggggagATATGGAGAGCTGGTAAACGAGGGCCaagggaagggaagggaaggggggggaggggaggggGgagagag-a--gagagagacagagagacaga i mm10.chr7 C 0 C 0 s canFam3.chr1 19644795 303 - 122678785 CGGGAAGGGCTGCTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGTGGCAGGAGGGAGGAGGGAGGGTGGCTGGTCAGA--------------------CATCCCTGGCTGGGAGGGTGGCCACAGCTAGTGTCTGACGTCCGGGGGGCCTGAGACTGGGGAGCTGCGGGGAGAGGGTTATGAAACCTCCAACAGGAGGAAGGAGGCCAGAGGCCTGAGATT-ggggagatg-gggggggagg--ggcgagga---ggagggagaggggTCTGAAACCCAGAACA--AGGGGAGTGAC-ACTCAGAGAAAAAAGGACAAGAA i canFam3.chr1 C 0 I 1485 e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=43831.000000 s hg38.chr19_GL949748v2_alt 156187 29 + 1064304 cagaaaaacagacagagGgg--ccggtgcgg s panTro4.chr19 59089396 25 + 63644993 CAGAAAA----ACAGAGGgg--ccggcgcgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966477 29 + 60714840 cagaaaaacagacagagGgg--ccggcgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735720 29 - 106955855 CAGAAAAACAGACAGAGGgg--ccggcgtgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153303 29 + 51301725 cagaaaattagaaagagggg--ctggcgcgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857912 29 + 50890351 cagaaaattagaaagagggg--ccggcgcgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440472 31 + 49145316 cagGAAATTAGATAGTGGGggccaggcgcgg i calJac3.chr22 C 0 C 0 s mm10.chr7 3686267 29 + 145441459 gagagacagagacagagagg--ggggtaggg i mm10.chr7 C 0 I 1637 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=403767.000000 s hg38.chr19_GL949748v2_alt 156216 230 + 1064304 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttggacagcagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaatcagccaggt---gtggagggcacctgaattcccagctactggggaggctgaggcgggaggatcgtttgagcccaggctgcagtgagcagtgactgagctactgcattccagcc s panTro4.chr19 59089421 230 + 63644993 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttggagagcagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggt---gtggagggcacctgaattcccagctactggggaggctgaggcgggaggatcgtttgagcccaggctgcagtgagcagtgactgagctactgcattccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966506 232 + 60714840 tggctcacacctgcaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttcgaggccagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgaattccgagctac-ggggaggctgaggcgggagaatcgtttgagcccaggctgcagtgagcagtgactgtgctactgcgttccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735749 233 - 106955855 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttcgagaccagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgaattcccagctactggggaggctgaggcaggaggatcgtttgagcccaggctgcagtgagcagtgactgtgctactgcgttccagct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153332 233 + 51301725 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaagagttcgagaccagtctgggcaaaatggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgtaatcccagctactgggggggctgaggcgggaggatcgtttgagcctaggctgcagtgagcagtgactgTGCTACTGCGTTCcagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857941 233 + 50890351 gggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaagagttcgagaccagtctgggcaaaacggcaagaccccatcactacaaaaaatgaaaattagctaggtgtggtggagggcacctgtaatcccagctactgggggggctgaggcgggaggatcgtttgagcctaggctgcagtgagcagtgactgtgctactgcgttccagcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440503 228 + 49145316 tggctcatacctagaattccagcactttgggagacctaggtgggag----gcttgagcccaagagtttgagaccagcctgggcaaaatggcaaaaccctgtcactacaaaacataaaaattaggcaggtgtggtgga-ggcacctgtaatcccagctactggggaggctgaggtgggaggatcgcttgagcccaggctgcagtgagcagtgactgtgctatggagttccagcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=12928.000000 s hg38.chr19_GL949748v2_alt 156446 10 + 1064304 agggagggag s panTro4.chr19 59089651 10 + 63644993 agggagggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966738 10 + 60714840 agggagggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735982 10 - 106955855 agggagggag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153565 10 + 51301725 ggggaaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858174 10 + 50890351 agggaaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440731 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=4159.000000 s hg38.chr19_GL949748v2_alt 156456 8 + 1064304 ggagggag s panTro4.chr19 59089661 8 + 63644993 ggagggag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47153575 8 + 51301725 ggaaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858184 8 + 50890351 ggaaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102735992 0 - 106955855 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=1751.000000 s hg38.chr19_GL949748v2_alt 156464 6 + 1064304 ggaggg s panTro4.chr19 59089669 6 + 63644993 ggaggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102735992 2 - 106955855 ----gg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46858192 6 + 50890351 ggaagg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=13597.000000 s hg38.chr19_GL949748v2_alt 156470 54 + 1064304 aaggagtgaagaagggaagaaagaagggagggaaggagggaaggaaggagggag s panTro4.chr19 59089675 54 + 63644993 aaggagtgaagaagggaagaaagaagggagggaaggagggaaggaaggagggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102735994 54 - 106955855 aaggagggaaggagggaagaagggaaggaaggaagaagggaaggaaggagggag i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=4041.000000 s hg38.chr19_GL949748v2_alt 156524 64 + 1064304 ggaaggagggaaggaagaagggagggaaggagggaaggaaggagggagggagggaaggagggaa s nomLeu3.chr10 102736048 64 - 106955855 ggaaggagggaaggaggaagggaaAAAGGGAAAGACGGAGGGAGAGGGGAAGGAAAGAAAGAAA i nomLeu3.chr10 C 0 I 360 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 156588 400 + 1064304 ggaaggagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaagaagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaaggagggaaggaaggagggaaggaaggagggagggaaggaaggagggagggaaggaaggagggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaa e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=2257.000000 s hg38.chr19_GL949748v2_alt 156988 26 + 1064304 ggagggagggaaggagggaaggaagg s ponAbe2.chr19 55966748 26 + 60714840 ggaaggagggaagaagggaaggaagg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=4371.000000 s hg38.chr19_GL949748v2_alt 157014 22 + 1064304 agggagggaaggaaggagggaa s ponAbe2.chr19 55966774 22 + 60714840 agggagggaaggagagaaggaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45440731 22 + 49145316 agggacaaagggaaggagggaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=3925.000000 s hg38.chr19_GL949748v2_alt 157036 17 + 1064304 ggaaggaagaagggaaa- s panTro4.chr19 59089729 17 + 63644993 ggaaggaagaagggaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966796 16 + 60714840 gaagggaagaagagaa-- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45440753 18 + 49145316 ggaggaaaagaggcaaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=6073.000000 s hg38.chr19_GL949748v2_alt 157053 10 + 1064304 agggaaggac s panTro4.chr19 59089746 10 + 63644993 agggaaggac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966812 8 + 60714840 --ggatggag i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46858198 10 + 50890351 agggaaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440771 10 + 49145316 agggagggag i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=188067.000000 s hg38.chr19_GL949748v2_alt 157063 117 + 1064304 ggagggaaggaggAAGGAAAGAAACTAGGAGATAGCTGTGGCACTTTAGCTACAATATGATGGTGGTCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGTTAAAA s panTro4.chr19 59089756 117 + 63644993 ggagggagggaggaaggAAAGAAACTAGGAGATAGCTGTGGCACTTTAGCTACAATTTGATGGTGGTCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGTTAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966820 90 + 60714840 ggagggaggaaggAAAGAAAGAAACTAGGAGATAGCTGTGGTACTTTAGCTACAACATGATGGTGGGCTGGCCTAGAGAG---------------------------GGGGTTAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60026555 117 + 64156825 ggaggaagggaggaaggaaagaaactaggagatagttgtggaactttagctacaacatgatggtgatctggcctagggaggaagcagtgTGATTCACAGAAGGGACCAGGGTTAAAA i rheMac3.chr19 I 1155 C 0 s papAnu2.chr19 47153583 117 + 51301725 ggaggaagggaggaaggaaagaaactagGAGATAGCTGCAGAACTTTAGCTACAACATGATGGTGATCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGttaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858208 117 + 50890351 ggaggaagggaggaaggaaagaaactaggagatagctgcggaactttagctacaacatgatggtgatctggcctagggaggaagcagtgTGATTCACAGAAGGGACCNGGGTTAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440781 117 + 49145316 ggaggaaggagggaaagaaagaaACTAGGACATAGCTGTGGCACTTTAGCTACAACATGATGGTAGTCTGGCCTAGGGAGGAAGGAGTGTGATTCACAGAAGGGACCAGAGTTAAAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e macFas5.chr19 55048529 6096 + 59248254 I a score=133911.000000 s hg38.chr19_GL949748v2_alt 157180 69 + 1064304 TTTTTATATGTTCAC-AAAGGCCGTATGTTTAGGTCAATGTAGCATGGGAAGATAAAAG--------GAAAAAAAAAA s panTro4.chr19 59089873 69 + 63644993 TTTTTATATGTTCAC-AAAGACCGCATGTTTAGGTCAATGTAGCATGGGAAGTTAAAAA--------GAAAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966910 69 + 60714840 TTTTTATATGTTCAC-AAAGACCGTATGTTTAGGTCAATGTAGGGTGGGAAGTTAAAAA--------GAAAAAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736472 69 - 106955855 TTTTTATATGTTCAC-AAAGACCGTATGTTTAGGTCAATGCAACATGAGAAGTTAAAAA--------GAAAAAAAAAT i nomLeu3.chr10 I 360 C 0 s rheMac3.chr19 60026672 70 + 64156825 TTTTTATATGTTCACAAAAGACCATATGTTTAGGTCAATGTAGCATGGAAAGTTaaaaa--------aaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153700 78 + 51301725 tttttgtatgttcACAAAAGACCATATGTTTAGGTCAATGTAGCatggaaagttaaaaataaaaaataaaaaagaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858325 76 + 50890351 TTTTTGTATGTTCACAAAAGACCATATGTTTAGGTCAATGTAGCATGGAAAGTTaaaaataaaaa--aaaaagaaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440898 70 + 49145316 TTTTTGTATATTCACAAAATAACACATGTTTAGGTCAATGTAGTATGGGACGTTAAAAA--------TTAAAAAAGGA i calJac3.chr22 C 0 I 310 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=6360.000000 s hg38.chr19_GL949748v2_alt 157249 7 + 1064304 ----CAAATTA s panTro4.chr19 59089942 10 + 63644993 -AAACAAATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966979 9 + 60714840 --AACAAATTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736541 2 - 106955855 ---------TA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60026742 11 + 64156825 aaaaaaaaTTA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153778 11 + 51301725 aaaaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858401 11 + 50890351 aagaaaaatta i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440968 310 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=606277.000000 s hg38.chr19_GL949748v2_alt 157256 284 + 1064304 AAATaaataaataagaccacatgttgtatgattccatttgtaagcgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgtgggatgatggacatggggtttctttgcagggtatgaaactgttctgaatata-actacacaatggtcatgtctgcacaactcggtgaatatactaaaaatcagggagttgtat----gttttGTGTTTTTTT-----------TTTTTTCCAGGAAATTAAAGAAGCCAAGAGTTGTATGT s panTro4.chr19 59089952 283 + 63644993 AAATaaataaataagaccacatgttgtatgattccatttataagcgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgcgggatgatggacatggggtttctttgcagggtatgaaactgttctgaatata-actacacagcggtcatgtctgcacaactctgtggatataccaaaagtcagggagttgtat----gttttGTGTTTTTTT-----------TTTCC-CCAGGAAATTAAAGAAGCCAAGAGTTGTATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966988 284 + 60714840 AAATaaataaataagaccacatgttgtatgattccatttataagcgcaatgtccagaacaggcaaatctttacagatagaaggtcaattactggttaccagggatggatggaggtttgcgggatgatggacatggggtttctttacagggtatgaaactgttctgaatata-agtacacagtggtcatgtttgcacaactctgtggatatactaaaaatcagggagttgtaT----GGTTGTTGTTTTTTT-----------TTTTTTTCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736543 288 - 106955855 AAATaaataaataagaccacgtgttgcatgattccatttataagtgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgcgagatgatggatatggggtttctttgcagggtatgaaactgttctgaatata-actacacagtggtcatgtttgcacaactctgtggatatactaaaaatcagggagttgtaTGTTGGtttttttttttttt-----------tttttttCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60026753 286 + 64156825 AAATaaataaataagaccacatattgtgtgattccatgtgtaagtacaatgtccggaacaggcaaatctttacagatagaaagtcaattactggtttccagggatggatggaggtttgggggatgacggatatggggtttctttgcagggtatgaaattgttctgaaaatacactacacagtggtcatgtttgcacaactccgtggatatactaaaaatcagggagttgtaT----GTTGGTTTTTCTTTTC----------TTTTTTTCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153789 293 + 51301725 aaat-aataaataagaccaCATGTTGTGTGATTCCATGTGTAAGTACAATGTCCGGAACAGGCAAATCTTTACAGATAGAAAGTCAATTACTGGTTTCCAGGGATGGATGGAGGTTTGGGGGATGACGGATATGGGGTTTCTTTGCAGGGTATGAAATTGTTCTGAAAATA-ACTACACAGTGGTCATGTTTGCACAACTTCGTGGATATACTAAAAATCAGGGAGTTGtat----gttggtttttcttttcttttctttt-tttttttcaggaaatcaAAGAAGCCAAGAGTTGTATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858412 296 + 50890351 aaaTaaataaataagaccacctgttgtgtgattccatgtgtaagtacaatgtccggaacaggcaaatctttacagatagaaagtcaattactggtttccagggatggatggaggtttgggggatgatggatatggggtttctttgcagggtatgaaattgttctgaaaatgcactacacagtggtcatgtttgcacaactccgtggatgtactaaaaatcagggagttgtaT----GTTGGtttttcttttcttttcttttctttttttCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441278 268 + 49145316 aaataaataaataaGA-cacaggttgtatgactccatttgtgagcacaatgtccagaacaggcagatctttacagacaggaagtcaagcagtgctttccagagacggacggcggtttgggggatgacagatctggggtttctttgcagggtgtgaaactgttgtgaaaata-actacacagtggtcatgtttgtacaactcggcggatatactaaaagtcagggaattTTTT------------------------------TTTTTTTTACAGAATCAAAGCAGCCAAGAGTTGTGTGT i calJac3.chr22 I 310 I 322 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=210795.000000 s hg38.chr19_GL949748v2_alt 157540 155 + 1064304 TTTAAGTGGATGAGTATGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAACCTTTGATGAGGTAAACATTAATGAAAAATATTTTCTTTTTAAAATTT--Cacatatatatacacatacacacatacata----tatatacacacatgcacacac s panTro4.chr19 59090235 155 + 63644993 TTTAAGTGGATGAGTATGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAACCTTTGATGAGGTAAACATTAATGAAAAATATTTTCTTTTTAAAATTT--Cacatatatatacacatacacacatacata----tatatacacacatgcacacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967272 144 + 60714840 TTTAAGTGGATGAACATGTGAATTAGAGTTCTCTAAAGCTGTTATTGG------AAAAAAAAACCTTTGATGAGGTAAACA------AAAAATATTTTCTTTTTAAAATTT--Cacatatatatatatacacacacacacaca----catat------atatacacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736831 158 - 106955855 TTTAAGTGGATGAATATGTGAATTAGAATTCCCTAAAGCTTTTATTGGAAAAAAAAAAAAAAACCTTTGATGAGGTATACATTAATGAAAAATATTTTCTTTTTAAAATTT--cac----atatacacacacacacatacata----tatatacacacatgcacacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027039 144 + 64156825 TTTAAGTGGATGACTATGTGAATTAGAGTTCCCTAGAGCTGTTATTGG-------AAAAAAAA-CTTTGATGAGGTAAACATTAATGAAAATT------TTTTTAAAATTT--cacatatatatacatatatatacaca--------tatatatacacacgcacacac i rheMac3.chr19 C 0 I 323 s papAnu2.chr19 47154082 154 + 51301725 TTTAAGTGGATGACTATGTGAATTAGAGTTCCCTAAAGCTgttattgg-------aaaaaaaa-ctttGATGAGgtaaacattaatgaaaaat------ttttttaaatttcacacatatatatacatatatatacacacacacacgtatatataaatatgtatacat i papAnu2.chr19 C 0 I 292 s chlSab2.chr6 46858708 144 + 50890351 TTTAAGTGGATGACTAGGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAA-CTTTGATGAGGTAAACATTAATGAAAAAT------TTTTTTGAATTT--CACacatatatatacatatatacaca--------tatatatacacatgcacacac i chlSab2.chr6 C 0 I 324 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45441546 322 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=16845.000000 s hg38.chr19_GL949748v2_alt 157695 9 + 1064304 acatacata s panTro4.chr19 59090390 9 + 63644993 acatacata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967416 9 + 60714840 acatacata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736989 9 - 106955855 acatacGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027506 9 + 64156825 acatacata i rheMac3.chr19 I 323 C 0 s papAnu2.chr19 47154528 9 + 51301725 acatacata i papAnu2.chr19 I 292 C 0 s chlSab2.chr6 46859176 9 + 50890351 acatacata i chlSab2.chr6 I 324 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45441546 322 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=24545.000000 s hg38.chr19_GL949748v2_alt 157704 13 + 1064304 tgtattttttgag--- s panTro4.chr19 59090399 13 + 63644993 tGTAttttttgag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967425 13 + 60714840 TGTAttttttgag--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736998 13 - 106955855 TGTATTTTTTGAG--- i nomLeu3.chr10 C 0 I 303 s rheMac3.chr19 60027515 13 + 64156825 tatattttttgag--- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154537 13 + 51301725 tatattttttgag--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859185 13 + 50890351 tatattttttgag--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441868 16 + 49145316 tgtatttttagtagag i calJac3.chr22 I 322 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=287524.000000 s hg38.chr19_GL949748v2_alt 157717 146 + 1064304 atggagtcttgctctgttgcccaggatggagtgcagtggtgtgatcttggctcactgcaaactccgtctcgtgggttcaagcgattctccagtttcagcctcccaagtagctgggattacaggcacacaccaccatgcccgg-ctaa s panTro4.chr19 59090412 146 + 63644993 atggagtcttgctctgttgcccaggatggagtgcagtggtgcgatcttggctcactgcaacctccgcttcttgggttcaagcgattctccagtttcagcctcccaagtagctgggattacaggcacactccgccatgcccgg-ctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967438 146 + 60714840 atggagtcttgctctgttgcccaggatggagtgcagcggtgcaatcttggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcctgg-ttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737314 146 - 106955855 atggagtcttgctctgttgcccaggatggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggtatacaccaccatgcctgg-ctaa i nomLeu3.chr10 I 303 C 0 s rheMac3.chr19 60027528 146 + 64156825 acggaatcttgctcttttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154550 146 + 51301725 acggaatcttgctcttttgcccaggctggagtgcagtggtgcaatctcgcctcactgcaacctccgcctcctgggttcaagcgattctcccgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859198 146 + 50890351 acggaatcttgctcttttgcccaggctggagtgtagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441884 114 + 49145316 acggggtttcaccatgttgaccaggatgg-------------------------------tctcaatctcttgacctc--gtgatccactcgcctcagcctcccaaagcgctgggattataggcgtgagccaccgcacccggcctaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=359034.000000 s hg38.chr19_GL949748v2_alt 157863 138 + 1064304 tttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctgcctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccctttt s panTro4.chr19 59090558 138 + 63644993 tttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctgcctgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967584 138 + 60714840 tttttgtattttcagtagagacggggtttcaccgtgttggccaggctggtctcaaaccc---------------ctgacctca-----ggtgatctgcctgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcctggccCtttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737460 138 - 106955855 tttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctggctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027674 136 + 64156825 tttctgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctc---------------ctgacctt-------gtaatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagtcactgcgcccggccCtttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154696 138 + 51301725 tttctgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctta-----ggagatctgcccgtctcggcctcccaaagtgctgggattacaggcgtgagtcactgcgcccagccctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859344 138 + 50890351 tttctgtatttttagtagagatgggatttccccatgttggccaggctggtctcaaactc---------------ctgacctta-----ggagatctgcccgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccagccctttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441998 138 + 49145316 tttttgtatttttaatagagatagggtttctccatgttggccagcctggtctcaaaccc---------------ctgacctca-----ggtgatccacctgccttagcctcccaaagtgctgggattacaggcatgagccactacacccagccCTTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3687933 157 + 145441459 tttttttttttttttccgagacagggtttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctccc-gagtgctgggattaaaggcttgcgccaccatgcctggctctctg i mm10.chr7 I 1637 I 128 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=329562.000000 s hg38.chr19_GL949748v2_alt 158001 152 + 1064304 aattttatatttatttattttttaAAAATAAAGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaacttttggcctcaagcaatcctctcgcctcagcctccgaaagtgctaggattataggcataagccccca s panTro4.chr19 59090696 152 + 63644993 aattttatatttatttattttttaaaaataaaGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaactcttggcctcaagcaatcctctcgcctcagcctccgaaagtgctaggattataggcataagccccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967722 152 + 60714840 aattttatatttatttatttttttaaaataaaGGTTTAAAATAAagggacgggatcttgctatgttgcccaagttgatctcgaactcttggcctcaagcaatcctctcgcctcagcctcccaaagtgctaggattataggcataagccccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737598 152 - 106955855 AATTTTATATTTGTTTATTTTTTTAACATAAAGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaactcttggtttcaagcaatcctctcacctcagcctcccaaagtgctaggattataggcataagccccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027810 152 + 64156825 aattttatatttatttatttttttaaaataaaGGTTTAAATTAAagagacgggatcttgctacattggccaagtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagtcccca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154834 152 + 51301725 aattttatatttatttatttttttaaaataaaggtttaaaataaaGGGACGGGATCTTGCTACATTGGCCAAGtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagTCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859482 152 + 50890351 aattttatatttatttatttttttaAAATAAAGGTTTAAAATAAagggacgggatcttgctacgttggccaagtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagtcccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442136 134 + 49145316 AATtttatatttattta-----------------tttaaaacaaagggat-ggatcttgctatgttggccagattgactttgaactcttggcctcaggcagtcctctcacctcagcctcccaaagtgctatgattataggcatgagccccca i calJac3.chr22 C 0 C 0 e mm10.chr7 3688090 128 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=20007.000000 s hg38.chr19_GL949748v2_alt 158153 8 + 1064304 cgcccagA s panTro4.chr19 59090848 8 + 63644993 cgcccagA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967874 8 + 60714840 cacccagA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737750 8 - 106955855 agcccagA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027962 8 + 64156825 cgcccagA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154986 8 + 51301725 CGCCcaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859634 8 + 50890351 cacccagA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442270 8 + 49145316 cgcccagc i calJac3.chr22 C 0 C 0 s mm10.chr7 3688218 8 + 145441459 TGCCTGGA i mm10.chr7 I 128 C 0 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=1434208.000000 s hg38.chr19_GL949748v2_alt 158161 519 + 1064304 TGAAAA---ATATTTCCTTAAGCTGAAAGTGGACCCTAAGCCGTGAATATTTGTTGTCTGGGAAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATTGCTTAGGTTGag-acagccagcttctaccccaaagcagctctggtccagcggaggtgtgagacgtagacccagac--acatgccca-ccctcacag--cagcagatgctaggatggaggttgccctgggcagggcgGG------AACACACAACAGGCACTCAGGGCGGAAGGGGACACAGGA--GACAGAGCGGCAGAGT--------TGTTAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGTGTCTCCATCAGGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGATGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG s panTro4.chr19 59090856 527 + 63644993 TGAAAA---ATATTCCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTAGTCTGGGAAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATCGCTTAGGCTGag-acagccagcttctaccccaaagcagctctggtccagcggaggtgtgagacgtagacccagac--acatgccca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACAGGCACTCAGGGCGGAAGGGGACACAGGA--GACAGAGCGGCAGAGTGGCACAGCTGTCAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAGGGAGGGCACATCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967882 525 + 60714840 TGTAAA---ATATT-CCTTAAACTGAAAGCGGACCCTAAGCTGTGAATATTTGTTGTCTGGGCAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATATGCTACAAG----GAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggtgtgagatgtagacccagac--acatgctca-ccctcacag--cagcagatgctaggatggaggctgccccggggagggtgGA------AACACAGAACAGGCACTCAGGGCGG-AGGGGACACAGGA--GACAGAGTGGCAGAGTGGCAGAGCTGTCAGGGCAGCCCCACTTACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCT-GACTTCACTGGCCAGGCTCACCAGCTG i ponAbe2.chr19 C 0 I 352 s nomLeu3.chr10 102737758 520 - 106955855 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTGTCTGGGCAGCAAAAATATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATCGCTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggtgtgacacgtagacccagac--acgtgctca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACGGGCACTCAGGGCAGAGGGGGACACAGGT--GACAGAGTGGCAGAGC--------TGTCAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAGGGAAGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027970 507 + 64156825 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATTAGGTTGACATAGATCTTTACCTCCTTTCTCTCTTCTCTGTGCTCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggcgtgagacgtagacccagac--acatgctca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACATAGAACAGGCACTCAGGGCGG------------------CGGAGAGACAGAGC--------TGCC-GGGCAGGCCCACTCACCTGTCATGATTCCCACGTAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154994 507 + 51301725 tgaaaa---atatttccttaaactGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATCAGGTTGACATAGATCTttacctcctttctctcttctctgtgctCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGAGAACAGCCAGCTTCCACCCTGAAGCAGCTCTGGTCCAGCGGAGGCGTGAGACGTAGACCCAGAC--ACATGCTCA-CCCTCACAG--CAGCAGATGCTAGGATGGAGGTTGCCCCGGGCAGGGCGGG------AACATAGAACAGGCACTCAGGGTGG------------------CGGAGAGACAGAGC--------TGTC-GGGCAGGCCCACTCACCTGTCATGATTCCCACGTAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCttcctctgggccaggtgcaggtCCTGGACTTCACTGGCCAGGCTCACCAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859642 507 + 50890351 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTCTCTCTTCTCTGTGCTCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccgaagcagctctggtccagcggaggcgtgagacgtagacccagac--acatgctcg-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACAGGCACTCAGGGCGG------------------TGGAGAGACAGAGC--------TGTC-GGGCAGGCCCACTCACCTGTCATGATTCCCACATAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442278 491 + 49145316 TGAAAA---ATATTTCCTTAAACTAAAAGTGGACCCTAAAT----------------------------------------ACACAGACCTTTGCCTCCTTTATCTCTTCTCTTTGCTGCCAATAAGCTACAAC-AAGGAGAAGAGCAAGGAATCACTTAGGCTGAGAAGAGCCAGCCTCCACCCCAAGGCACTTCTGGTCCAGTGGAGGTGTGAGACTTGGATCCACAT--ACATGCTCA-CCCTCACAG--CAGCGGACGCTAAGATGGAGCTTGCCCCGGGCAGGGTGGG------AACACAGAATAGGCACCCAGGGAGGAGGGAAACACGGGA--GACAGAGCGGCGCAGCGGCAGAGCTGTCCCGGCAGGCCCACTCACCGGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCAGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCCGTGGCCATTTCCTTCCTCTGGGCTAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3688226 459 + 145441459 GGGAAAGATACATTTTCTGAAATGGAAA---GATCCTGGGTTAGGAATATTTACTCCATGGATGGCAGAAAC-CCAGGTTTACATAGGCC--TATCTCCTTTAACTCTCCTATTGGCCCCCTA------ACAGG----AGAAAAAGGAAGCAATCCTTCAGGATTAG--------------TTCCCACAGTAG---------------------------------ACAG--ATATGCT-----CTGACAGGACAGTAGCTGACAGAGTGTAGGTAGCCTAGGACAGAGCCGGGGACATAACACAGGAACAGAACTCTGGGTAGATCGAGGCAGAGGA-TGACCCAGAG---------------TGCT-GGGCAGG--CACTCACCTGTCATGATTCCCACGTAACAGTAGCTATAGCTGAGTGTCTCCATCAAAGAGGGGACCTCAGGCAGGAGGCCCAGCGTAGGCTCCTTGTGGAAGCCGGAGGCTATTTCCTTTCTCTGAGCCAGATGCAGATCCTGGACTTCACTAGCTAGACTCACCAACTG i mm10.chr7 C 0 I 2 s canFam3.chr1 19646583 479 - 122678785 TGGAAA---CTACCTCCTGAGGCT-AACGTGG-----GAGTGGAATGTATTTATTCCCTGCATGGCAGAAACCTCAGGCTTCCATAGGTCATT--CTCCCTCATCTC--CTATTTGTTCCCAAGAAGCCACAGG----------------AAATCATTTAGGCGGAGAACAGTCTGTCTCTACTCTGGAGGAG--------CAGCGGGAAAGCTTGACATAAACCCAGGCCTAGATGCTCATCCTTTAGAG--GAGCAGACACTGGGATGGAG---------------GCAGG------AACACAGGGCAGGCACCAAAGTCAGGGTGCAGAATGGAGCCGAGAGGGTGACGGGAT--------GGGG-GCACAGGCACACTCACCTGTCATGATTCCTACGTAGCAGTAGCTGTAGCTGAGTGTCTCCATCAGGGAGGGGACGTCAGGCAGGAGCCCCAGGCTGGGCCCCTTGCTGAAACCTGAGGCCATTTCCTTCCTCTGGGCCAAGTGCAGGTCCTGTACTTCACTGGCCAGGCTCACCAGCTG i canFam3.chr1 I 1485 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=9000.000000 s hg38.chr19_GL949748v2_alt 158680 2 + 1064304 GG s panTro4.chr19 59091383 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968759 2 + 60714840 GG i ponAbe2.chr19 I 352 C 0 s nomLeu3.chr10 102738278 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028477 2 + 64156825 GG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155501 2 + 51301725 GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860149 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442769 2 + 49145316 GG i calJac3.chr22 C 0 I 20 s mm10.chr7 3688687 2 + 145441459 GG i mm10.chr7 I 2 C 0 s canFam3.chr1 19647062 2 - 122678785 GG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=119831.000000 s hg38.chr19_GL949748v2_alt 158682 59 + 1064304 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC s panTro4.chr19 59091385 59 + 63644993 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968761 59 + 60714840 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCATACCCATCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738280 59 - 106955855 TGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028479 59 + 64156825 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCCTTCCCCACACCCATCTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155503 59 + 51301725 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCCTTCCCCACACCCATCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860151 59 + 50890351 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCGTTCCCCACACCCATCTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3688689 55 + 145441459 AAGAGAGAGGAAGGCAAGTGAT-----TGG---CGTCCCCAGGCCA-CCTTCACATCCACTTTC i mm10.chr7 C 0 I 1564 s canFam3.chr1 19647064 57 - 122678785 -AGCAGGGGGCACACGTAGGGTACAGACACATCAGACAACAGGACC-TCCTCGCCCCCA----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45442771 20 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=12201.000000 s hg38.chr19_GL949748v2_alt 158741 8 + 1064304 CTTGCGCG s panTro4.chr19 59091444 8 + 63644993 CTTGCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968820 8 + 60714840 CTTGCGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738339 8 - 106955855 CTTGCGCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028538 8 + 64156825 CTTGTGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155562 8 + 51301725 CTTGTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860210 8 + 50890351 CTTGTGCT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647121 0 - 122678785 C e calJac3.chr22 45442771 20 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=841860.000000 s hg38.chr19_GL949748v2_alt 158749 403 + 1064304 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCCCATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagggctcagtcccaggccctcc--tccc--ctttccctgttctgtgcttacctgctctcacgcaatcacggaggtttcgatactatccacacgctgaggacgcccaaacgcta----------------------ccccag-ccccagacctatccaatcaagtggcttattggcatttatactcggatgtct-ccaggcacccc-----aaacgcactggaaacggaacatgatgttacccaccccacaaggtagaccctcttctagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaat--------ctCCCTCACTCCCCAAATCCGATCCTTTAAtctc s panTro4.chr19 59091452 402 + 63644993 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCCCATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagggctcagtcccaggccctcc--tccc--ctttccctgttccgtgcttacctgctctcatgcaatcacggaggtttcgatactatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttatactcggatgtct-ccaggcacccc-----aaacgcactggaaacggaacatgatgttacccaccccacaaggtagaccctcttctagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaat--------ctCCCTCACTCCCCAAATCCGATCCTTTAATCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968828 401 + 60714840 GCTGCCCTCAGCAGCCAAGGCGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCACATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagtgctcagccctaggccctcc--tcccctctttccctattccatgcttacctgctctcactcaatcacggaggtttcgatattatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttatactccgatgtct-ccaggcacccc-----aaacgcactggaaacagaacacgatgttacccaccccacaaggtagatcctcttctagtgtctcccctca---aataggccacca--------aattgttcaagtcaaaaac--------ctCCCCCACTCCCCAAATCCAAtcttttaatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738347 403 - 106955855 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------A-CAGCTCTGCACATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagtgctcagtcccaggccctcc--tcccctctttcccttttccgtgcttacctgctctcacgcaatcgcggaggtttcgatactatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaaatggcttattggcatttatactcggatgcct-ccaggcacccc-----aaatgcaccggaaacggaacacgatgttacccaccccacaaggtagatcctctt-tagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaac--------ctCCCTCACTCCCCAAATCCAATCCtttaatctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028546 399 + 64156825 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGCGTATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCagtgctccccagggctcagtcccaggccctcc--tccccgccttccctgttctgtccttacctgctctcaggcagtcccagaggtttcgatactatccacacactgatgatgctcaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttagactcggatgtct-ccaggcacccca----aaacgcactggaaacggaagacgatgttacctgccccacaaagtagatcctcttctagtgtctcccctgaaacaataggccacca--------aattgttcaaacccaaaac--------ctCCCTCACTCCCCAAATCCGAtctctt------ i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155570 405 + 51301725 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGTGTATCT--------AGGTTGTGT-GTAACGCCTCTAGCTAGGCAGTGTTCCCCAGAGCTCAGTCCCAGGCCCTCC--TCCCCGCCTTCCCTGTTCTGTCCTTACCTGCTCTCAGGCAGTCACAGAGGTTTCGATACTATCCACACACTGATGATGCTCAAACGCTA----------------------CCCCAG-CCCCAGACCTATCCA-TCAAGTGGCTTATTGGCATTTAGACTCGGATGTCT-CCAGGCAccgca----aaatgcactggaaacgGAAGACGATGTTACCCGCCCCACAAAGTAGATCCTCTTCTAGTGTCTCCCCTGAAACAACAGGTCACAA--------AATTGTTCAAACCCAAaacctccctcactccctcactcCCCAAATccgatctc-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860218 403 + 50890351 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGCATATCT--------AGGTTGTGT-GTAAGGCCTCTAGCTGGGCAGTgttccccagggct--gtcccaggccctcc--tccctgccttccctgttctgtccttacatgctctcaggcagtcacagtggtttcgatactatccatacactgatgatgctcaaacgcta----------------------ccccag-ccccagacctatcca-tcaaatggcttattggcatttacactcagatgtct-ccaggcaccaca----aaacgcactggaaacggaagacgatgttacccgccccacaaagtagatcctcttctagtgtctcccctgaaacaataggccacca--------aattgttcaaacccaaaacctcccttactccctcactccccaaatccgatcTC-------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442791 374 + 49145316 GCTGCCCTCTGCAGCCACAGGGTGCT-------GGGCACCC--------------------------ACCAGCTTTGCACCCCA--------AGGTTGTTT-GTAAAGGCCGTATC-GGACagtg-tctccagggctgagtcccaggcattcc--tccc--ctttccccattccatccttacctgctctcacacaatcacggagctttagatactaccca-----------------------------------------------cccag-ccccagacctatcca-ggtaatggcttattggcatcgatacgtggatgtct-cta-gcacttc-----aaaagcactggaaacagaagacgatgttaccca-cccacaaagcagaccctcttctagtctctcccctcaaacaaaaggccaccg--------aattgttcaagctgaaaac--------ctCCCTCGATCCCCAAATCCTATCCCTTAACCtc i calJac3.chr22 I 20 I 294 s canFam3.chr1 19647121 456 - 122678785 -CTCCTCTCAGCAGCCAAGGGGTGCTGCGGCCAGCGTGCCACTAGGAGCCGAGCTTCTATTCCAGGGG-CAGCTCTGGGCCTCTGGAATCAGAGGTGGCCCGGTAGCAGCTTCTGCTAGCTGAGGGCTTTGGGCACTCCCTTCTGGGcccttccatctctctgttcccccttccaggttcttctgtcct----------ctgtggctt-gataccagccacgatctcatgacctccacaaactgtatccttagtctgggttcctccctccagcccccaaaaccactca---gggtgactc-ctgtcattaggacttggatgcctgccaggttcctcagactcgacacatccagagtggagcgttgtgctactcactccacagagcgggtcccctcccag----tcccctcag--caaaggccaccagcagcctgaactgctcagaccaggaac--------ctGCCTTACTTCCCAGATCTGATCCC-------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=-4554.000000 s hg38.chr19_GL949748v2_alt 159152 12 + 1064304 tct------ttttttttt s panTro4.chr19 59091854 18 + 63644993 tctctctttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969229 7 + 60714840 tct-----------tttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738750 4 - 106955855 ttt--------------t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028945 5 + 64156825 --t-----------tttt i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 46860621 1 + 50890351 -----------------G i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647577 0 - 122678785 C e calJac3.chr22 45443165 294 + 49145316 I e papAnu2.chr19 47155975 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I a score=238135.000000 s hg38.chr19_GL949748v2_alt 159164 111 + 1064304 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatactggtgtgatctcggctcactgcaacccccacctcctgggggcgcaagcaattctcatgcctc s panTro4.chr19 59091872 111 + 63644993 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatagtggcgtgatctcggctcactgcaacctccacctcctgggggctcaagcaattctcatgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969236 111 + 60714840 ttttcttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatagtggcgcgatctcggctcactgcaacctgtgcctcctggaggctcaagcagttctcatgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738754 110 - 106955855 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagcatagtggcgc-atctcagctcactgcaaactccgcctcctgggggctcaagcaattctcatgcgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028950 109 + 64156825 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcaca--gtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i rheMac3.chr19 C 0 I 26 s papAnu2.chr19 47155975 111 + 51301725 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcacgatgtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860622 111 + 50890351 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcacgatgtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443459 103 + 49145316 tctttctttttgagacaagtttta--ctctgtcgccca-----ggctggagta--------tgatcttggctcactgccaccttcccctcccaggggttcaagcaatgctcatgcctc i calJac3.chr22 I 294 C 0 s canFam3.chr1 19647577 90 - 122678785 --------------GCAGGTCTCGGAGTCTGTCCCCTACACTCCGCTGAGGCTGAATGGGTTCACCCTGGTTCCCTGCCCCCCCCTCCCCC--------------ACCCCCCCTTCTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=30128.000000 s hg38.chr19_GL949748v2_alt 159275 16 + 1064304 agctggc--caggctggt- s panTro4.chr19 59091983 16 + 63644993 agctggc--caggctggt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969347 16 + 60714840 agctggc--cagactggt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738864 16 - 106955855 agctggc--caggctggt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156086 16 + 51301725 agctggc--caggctggt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860733 16 + 50890351 agctggc--caggctggt- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443562 16 + 49145316 agctggc--caggctggt- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647667 19 - 122678785 TGCAGACCTCAGGCTGAGC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029059 26 + 64156825 I a score=125286.000000 s hg38.chr19_GL949748v2_alt 159291 52 + 1064304 ctcgaactcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG s panTro4.chr19 59091999 52 + 63644993 ctcgaactcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969363 52 + 60714840 ctcgaattcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738880 52 - 106955855 ctcgaactcctggcctcaagtgatctgcccgccttgaaatccctgaag-tTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029085 50 + 64156825 CTCGA--TTCTGGCCTCAAGTAATCGGCCTGCCTTGAAATCCCTTAAG-TTTG i rheMac3.chr19 I 26 C 0 s papAnu2.chr19 47156102 52 + 51301725 ctcgaacttctggcctcaagtaatcggCCTGCCTTGAAATCCCTTAAG-TTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860749 52 + 50890351 ctcgaacttctggcctcaagtaatctgcctgccttgaaatcccTTAAG-TTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443578 53 + 49145316 ctcaaactcctggcctcaagtgatctgcccaccttgaaatcccTTAAGTTTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647686 47 - 122678785 CTACAGCAGCAGGCCTCAGCTGGGCTTCCAGCTT-----CCTCTCAGG-TTTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=276506.000000 s hg38.chr19_GL949748v2_alt 159343 123 + 1064304 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT s panTro4.chr19 59092051 123 + 63644993 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969415 123 + 60714840 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCATCCTTTCCCACCAGTCCCAAGGCCCACCctatatcaacagacctccttcttccagcttgtggctggctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738932 123 - 106955855 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATATTGTAGTATCCACCCTTTCCCACCAGTCCAAAGGTCTACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029135 123 + 64156825 ACTCTGTTGCCTCTTTTCATCTCCACTACTGAGCTGAATATGTTGTactctccaccctttcccaccagtcccaaggtccaccctatatcaatagatctcattcctccagcttgtggctgggtt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47156154 123 + 51301725 ACTCTGTTGCCTCTTTTCATCTCCACTACGGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCGTTCTTCCAGCTTGTGGCTGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860801 123 + 50890351 ACTCTGTTGCCTCTTTTCATCTCCACTACTGAGCTGAATATGTTATACTCTCCAACCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCGTTCTTCCAGCTTGTGGCTGGGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443631 121 + 49145316 AGTC--TTGCCTCTTTCCGTCTCCACTAATGAGAGGAGTACGTTGTACTCTCCATCCTTTCCCGCCAGTCCCAAGGTCGGCCCTATATCCACAGGGCTCTGTCTTCCAGCTTCTGGCCAGGGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647733 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I a score=291516.000000 s hg38.chr19_GL949748v2_alt 159466 120 + 1064304 GTCAGTAGAAATCCCTGGCTGGA----GACAAAGTCAGG--AGAGGGAGGGTAGGGCTTTTATTCCCTTGTAAGATGGCCTTGGGCTGGCTGTCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT s panTro4.chr19 59092174 120 + 63644993 GTCAATAGAAATCCCTGGCTGGA----GACAAAGTCAGG--AGAGGGAGGGTAGGGCTTTTACTCGCTTGTAAGATGGCCTTGGGCTGGCTGTCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969538 120 + 60714840 gtcaatagaaacccctggctgga----gacgaagtcagg--agagggaggacagggcttttattcccTTATGAGATGGCTTTGGGCTGGCCGTCACCCCT--------GATAGATCATTTCAAGGT----GGGTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739055 120 - 106955855 GTCAATATAAATCCCTGGCTGGA----GACGAAGTCAGA--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTTGGGCTGGCCGCCACTCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029258 124 + 64156825 gtccatagaaatccctggctggagtcggacaaagtcagg--agagggagggcagggcttttattcccttgTGAGATGGCCTTGGGCTGGCCATCACCCTT--------GACAGATCGTTTCAAGGT----GGGTGGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47156277 124 + 51301725 GTCCATAGAAATCCCTGGCTGGAGTCCGACAAAGTCAGG--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTCGGGCTGGCCATCACCCTT--------GACAGATCGTTTCAAGGT----GGGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860924 124 + 50890351 GTCCATAGAAATCCCTGGCTGGAGTCGGACAAAGTCAGG--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTTGGGCTGGCCATCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443752 123 + 49145316 GCCAACAGAAAGCCCTGGCTGGAGATGCATGAAGACAGG--AGGGGGCAG-CAGGGCTTTTACTCCCCAGTGAGATGGGCTTGGGCTGGCCGTCGCCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647733 133 - 122678785 GCCCATAGAAAGCCCAGGGTGGA----GA-GGGGGCAGGCAGGATTGAGCACTGGGCTCTTCTTCCCTTGTAAGATCCCCAGGGCCTGGCTGTGCCCCTTCACTGATGGACGGACCGTGTCAAGATGGAGGGAGGGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=38426.000000 s hg38.chr19_GL949748v2_alt 159586 21 + 1064304 CTACACACCCTTTAAAAAAAA s panTro4.chr19 59092294 21 + 63644993 GTACACACCCTTTAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969658 21 + 60714840 CTACACACCCTTTAAAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739175 21 - 106955855 CTATACACCCTTTAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029382 21 + 64156825 CTACTCACCCTTTAAAAAAAA i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47156401 21 + 51301725 Ctactcatcctttaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861048 21 + 50890351 CTACTCACCCTTTAAAAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443875 20 + 49145316 CTACATACTCATAAAAAAAA- i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I a score=7644.000000 s hg38.chr19_GL949748v2_alt 159607 4 + 1064304 TAAT s panTro4.chr19 59092315 4 + 63644993 TAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969679 4 + 60714840 TAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739196 4 - 106955855 TAAT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156422 4 + 51301725 taat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861069 4 + 50890351 TAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443895 4 + 49145316 TAAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=136136.000000 s hg38.chr19_GL949748v2_alt 159611 112 + 1064304 TTTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggttgggagttcgagatcagcctgaccaacatggaaaaacc s panTro4.chr19 59092319 112 + 63644993 TTTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcgggagttcgagatcagcctgaccaacgtggagaaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969683 112 + 60714840 TTTggccaggcgtggtggctcatgcctgtaatctcagcactttgggaggccgaggcaggcggatcacctgaggtcaggagttcgagattagcctgaccaacatggagaaacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739200 112 - 106955855 TTTggccaggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggttgggagttcgagatcagcctgaccaatatggagaaacc i nomLeu3.chr10 C 0 M 136 s papAnu2.chr19 47156426 111 + 51301725 gttggcc-ggtgtggtggctcgcgccggtaatcccagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctgaccaacaaggagacatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861073 112 + 50890351 GTTggctgggtgtggtggctcgcgcctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcgggagtttgagaccagcctgaccaacaaggagaaacc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=24086.000000 s hg38.chr19_GL949748v2_alt 159723 28 + 1064304 ctgtctctactaaaaatacaaaaaatta s panTro4.chr19 59092431 28 + 63644993 ccgtctctactaaaaatacaaaaaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969795 28 + 60714840 ccgtctctactaaaaatacaaaaaatta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47156537 28 + 51301725 ccgtctctactaaaaatacgaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861185 28 + 50890351 ccgtctctactaaaaatataaaaagtta i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e nomLeu3.chr10 102739312 136 - 106955855 M e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=191685.000000 s hg38.chr19_GL949748v2_alt 159751 169 + 1064304 gccgggcatggtggtgagtgcctgtaattccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtaagccaagatcgtaccattgcactccagcctgggcaacaggagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa--------------------------------aa s panTro4.chr19 59092459 167 + 63644993 gccgggcatggtggtgcgtgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtaagccaagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa---------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969823 166 + 60714840 gccaggcatggtggtgcatgcctgtaattccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtaagccaagatcctaccgttgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaa----------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739448 170 - 106955855 gccgggcatggtggtgcatgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggctgaggttgcggtgagccaagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa-------------------------------aaa i nomLeu3.chr10 M 136 C 0 s papAnu2.chr19 47156565 201 + 51301725 gccgggcatggtggtgcatgcctgtaattccagctacccgggaagccagggcaggagaattgcttgaacccaggaggcggaggttgtggtgagccaagatcgtgctattacactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaaaaataaataaataaataaataaaataaaataaaaaaaatatatata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861213 161 + 50890351 gccgggcatggtgatgcatgcctgtaattccagctactcgggaagccgaggcaggagaattgcttgaacccgggaggcgggtgttgtggtgagccaagatcgtgctattgtactccagcctgggcaacaagagcaaaactccgtctcaaaaaaa----------------------------------------aTATATA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=7527.000000 s hg38.chr19_GL949748v2_alt 159920 5 + 1064304 TTTAG s panTro4.chr19 59092626 5 + 63644993 TTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969989 5 + 60714840 TTTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739618 5 - 106955855 TTTAG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156766 5 + 51301725 tatag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861374 5 + 50890351 TGTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443899 5 + 49145316 TTTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=566530.000000 s hg38.chr19_GL949748v2_alt 159925 280 + 1064304 ggccaggt-----gtgacggctcacacctataacactagcactttggttggcctaggcaggcagatcacttgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagcaaggcgtggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctcgaacccgagaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccatctttaa s panTro4.chr19 59092631 280 + 63644993 ggccaggt-----gtgacggctcacacctataacactagcactttggttggcctaggcaggcagatcacttgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagcaaggcgtggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctcgaacccgagaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccatctttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969994 280 + 60714840 ggccgggt-----gtgacggctcacacctgtaatactagcactttggttggcctaggcaggcagatcacttgatgtcaagggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagccaggcgtggtggtgggtgcctgtaatcccagctactcgagaggctgaggcaggagaatcgctggaacctgggaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccgtcCTTAA i ponAbe2.chr19 C 0 M 120 s nomLeu3.chr10 102739623 275 - 106955855 ggccgggt-----atgacggcccacacctgtaatactagcactttggttggcctaggcaggcagatcaattgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctgtact--aaaaatat---aaaaattagcca-----ggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctggaacctgggaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcaagactctgtctttaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054625 286 + 59248254 ggccaggc-----gtggtggctcacgcccgtaatcccagcactttgggaggctgaggtgggtggatcac--gaggtcaggagatcgagaccatcctggccaacacggtgaaaccccgtttctacttaaaaaaaattcaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagatcgcaccactgcactccagcctgggtgacagagcgagattctgtctt--a i macFas5.chr19 I 6096 C 0 s papAnu2.chr19 47156771 285 + 51301725 ggccTGGCATgatgtgatggttcatgcctgtaatcccaggactttggttggcctaggtgggcagatcacttgatgtcaggggtttgagaccagcccggccaagatggtgaaaccccgtctctact--aaaaatat---aaaaattagccaggtatggtggtgggcacctatagtcccagctactcgagaggctgaggtgggagaatcgctggaacctgggaggcagaggttgcagtg-----acatcacaccactgcactccagcctgggtgacagagcgagattctgtcttaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861379 285 + 50890351 GGCCTGGTGTGATATggtggctcacgcctgtaatcccagcactttggttggtctaggtgggcagatcacttgatgtcaggggtttgagaccagcccggccaagatggtgaaaccccgtctctact--aaaaatat---aaaaattagccaggtgtggtggtgggcacctgtagtcccagctactcgagaggctgaggtgggagaatcgctggaacctgggaggcagaggttgcagtg-----acatcacaccactgcactccagcctgggtgacagagcgagattctgtcttaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443904 253 + 49145316 ggccaggt-----gtggtggctcatgcttgcaatcccagcactttgggaggccaaggcaggtggatcacttgatgtcaggggtttgagaccagcctgggcaacatggtgaaacctcatctctact--aaaaatat---aaaaattagccggacatggtggtgggcacctgtaatctcagctactc--------------------------------gggaggcagaggttgcagtgagcagagattgcacaactgcactccagcctgggtgacagagcaagactccatctcaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e rheMac3.chr19 60029403 1 + 64156825 I a score=5603.000000 s hg38.chr19_GL949748v2_alt 160205 21 + 1064304 aaataaataacatttaaaaaa s panTro4.chr19 59092911 21 + 63644993 aaataaataaaatttaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739898 20 - 106955855 aaataaataaaa-taaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054911 9 + 59248254 aaaaaaaaa------------ i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47157056 9 + 51301725 aaaaaaaaa------------ i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46861664 21 + 50890351 aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 I 127 s calJac3.chr22 45444157 20 + 49145316 -aaaaaataaaataataaTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e rheMac3.chr19 60029403 1 + 64156825 I a score=-754.000000 s hg38.chr19_GL949748v2_alt 160226 4 + 1064304 TTAa- s panTro4.chr19 59092932 4 + 63644993 TTAa- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739918 4 - 106955855 TTAa- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054921 3 + 59248254 tta-- i macFas5.chr19 I 1 I 3 s papAnu2.chr19 47157066 3 + 51301725 tta-- i papAnu2.chr19 I 1 I 2 s calJac3.chr22 45444177 4 + 49145316 -TAAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e chlSab2.chr6 46861685 127 + 50890351 I e rheMac3.chr19 60029403 1 + 64156825 I a score=23499.000000 s hg38.chr19_GL949748v2_alt 160230 12 + 1064304 ttttttgtagag s panTro4.chr19 59092936 12 + 63644993 ttttttgtagag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739922 12 - 106955855 ttttttgtagag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054927 12 + 59248254 ttttttgtagag i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47157071 12 + 51301725 ttttttgtagag i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46861812 12 + 50890351 ttttttgtagag i chlSab2.chr6 I 127 C 0 s calJac3.chr22 45444181 12 + 49145316 ttttttgtagag i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e rheMac3.chr19 60029403 1 + 64156825 I a score=71096.000000 s hg38.chr19_GL949748v2_alt 160242 32 + 1064304 acagggtctcactatattgcccaggctggtct s panTro4.chr19 59092948 32 + 63644993 acagggtctcactgtattgcccaggctggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970394 32 + 60714840 acagggtctcactatattgcccaggctggcct i ponAbe2.chr19 M 120 C 0 s nomLeu3.chr10 102739934 32 - 106955855 acagggtctcactatattgcccaggctggtct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054939 32 + 59248254 acagagtctcactatattgcccaggctggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157083 30 + 51301725 ac--agtctcactatattgcccaggctggtct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861824 32 + 50890351 acagagtctaacgagattgcccaggctggtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444193 32 + 49145316 acagggtctcactatattgcccaggctggcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e rheMac3.chr19 60029403 1 + 64156825 I a score=246399.000000 s hg38.chr19_GL949748v2_alt 160274 82 + 1064304 taaactcctggcctccagcagtcctcccactatgacctcccaaagcgctgggattatacaagtatgagccactgcaccaggc s panTro4.chr19 59092980 82 + 63644993 taaactcctggcctccagcagtcctcccactatgacctcccaaagcgctgggattttacaagtatgagccactgcaccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970426 82 + 60714840 taaactcctggcctccagcaatcctcccactatggcctcccaaagcgctgggattatacaagtatgagccactgcaccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739966 82 - 106955855 taacctcctggcctccagcaatcctcccactgtgacctcccaaagcgctgggattatacaagtatgagccactgcaccagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029404 82 + 64156825 TAAActcctggcctccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55054971 82 + 59248254 taaactcctggcctccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157113 82 + 51301725 taaactcatggccgccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtgtgagtcactgcaccaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861856 82 + 50890351 taaactccaggcctccagcaagcctcccactatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444225 79 + 49145316 taaactcctggcctccagcaatcctcccaccatggcctcccaaagcactgggatta---gattatgaggcactgcgccAAGT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C a score=280280.000000 s hg38.chr19_GL949748v2_alt 160356 94 + 1064304 cTACACAACCCTTTTTCCATCCAGGTACCACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGAACGGCTCCTTCTGCGGGGCTGGGGTTCA s panTro4.chr19 59093062 94 + 63644993 cTACACAACCCTTTTTCCATCCAGGTACCACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGAACGGCTCCTTCTGCCGGGCTGGGGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970508 94 + 60714840 cTACACAACCCTTTTTCCATCCAGGTACCACAGCCTGACCCATTTCCTCTGGGCCTAGGGTTGGGAAGGGCTCCTTCTGCCGGTCTGGGGTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740048 94 - 106955855 cTAAACAACCCTTTTTCCATCCAGGTACGACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGATCGGCTCCTTCTGCCCGTCTGGCGTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029486 94 + 64156825 cTACACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCCATGAGTTGGGAACGGCTCCTGCTGCTGGTCTGGGGTTCA i rheMac3.chr19 C 0 I 298 s macFas5.chr19 55055053 94 + 59248254 cTACACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCCATGAGTTGGGAACGGCTCCTGCTGCTGGTCTGGGGTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157195 94 + 51301725 ctacACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCTGTGAGTTGGGAACGGCTCTTGCTGCTGGTCTGGGGTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861938 94 + 50890351 cTAGACAACCCTTTTTCCATCAAGGTACCACAACCTGACCCACCTCCCCTGGGCCTTGAGTTGGGAAGGGCTCCTGCTGCTGGTCTGGGGTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444304 91 + 49145316 CTACACAACCCTTTCTCCACCCAGGT---ACAACCTGCCCCACTTCCCCTGGGCCTAGGGTTGGGAAGGGCTCCTGCCGCAGGTCTGGGGTTCA i calJac3.chr22 C 0 I 4 s canFam3.chr1 19647866 81 - 122678785 CTGCACAA--TGTCTTCCCTTCAGGTTGCACTACCTGGCCCTCTTCTC---GGCCCTGGGCT--------CCCCAGCTGCTGGTCCAGGATTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=40679.000000 s hg38.chr19_GL949748v2_alt 160450 13 + 1064304 GGCAC----CATCCCTT s panTro4.chr19 59093156 13 + 63644993 GGCAC----CATCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970602 13 + 60714840 GGCAC----CATCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740142 13 - 106955855 GGCAC----CATCCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029878 13 + 64156825 GGCAC----CACCCCTT i rheMac3.chr19 I 298 C 0 s macFas5.chr19 55055147 13 + 59248254 GGCAC----CACCCCtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157289 13 + 51301725 GGCac----cacccctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862032 13 + 50890351 GGCAC----CACCCCtt i chlSab2.chr6 C 0 I 565 s calJac3.chr22 45444399 17 + 49145316 GGCACTTCTTGTCCCTT i calJac3.chr22 I 4 C 0 s canFam3.chr1 19647947 12 - 122678785 -TCAC----TGTCCCCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=837.000000 s hg38.chr19_GL949748v2_alt 160463 3 + 1064304 CTT- s panTro4.chr19 59093169 3 + 63644993 CTT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970615 3 + 60714840 CCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740155 3 - 106955855 CTT- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029891 2 + 64156825 -TT- i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55055160 2 + 59248254 -tt- i macFas5.chr19 C 0 I 304 s papAnu2.chr19 47157302 2 + 51301725 -tt- i papAnu2.chr19 C 0 I 302 s calJac3.chr22 45444416 3 + 49145316 CTC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647959 3 - 122678785 -CTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e chlSab2.chr6 46862045 565 + 50890351 I a score=453905.000000 s hg38.chr19_GL949748v2_alt 160466 204 + 1064304 GCTCTTCTACATCCTGCCCAATTGGTGGC-------CACTCCTTCAGTCATCCTAAATGC-GCGTTTCCTGCTGCAACTCA--GACCTACccacagccagccaacggcctgtatcaagcca-ccacagtttgtcacctggactc--------------------------------------ggacaaaggaggatccctttatctgagtccatcccatcttgccctgttccacttcaattctccttcagcat s panTro4.chr19 59093172 204 + 63644993 GCTCCTCTACATCCTGCCCAATTGGTGGC-------CACTCCTTCAGTCATCCTAAATGC-GCGTTTCCTGCTGCAACTCA--GACCTACCCACAGCCAGCCAACGGCCTGTATCAAGCCA-CCACAGTTTGTCACCTGGACTC--------------------------------------GGACAAAGGAGGATCCCTTTATCTGAGTCCATCCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970618 204 + 60714840 GCTCCTCTACATCCAGCCCACATGGTGGC-------CACTCCTTCAATCATCCTAAATGT-GCGTTTCCTGCTGCAGCTGA--GACCTACccacagccagccaacagcctgcatcaagcca-ccacagtttgtcacctggactc--------------------------------------ggataaaggaggatccctttatctaagtccatcccatcttgccctgttccacttcaattctccttcagcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740158 204 - 106955855 GCTCCTCTACACCCTGCCCACATGGTGGC-------CGCCCCTTCAATCATCCTAAATGC-ACATTTCCTGCTGCAACTCA--GACCTACCCACAGCCAGCCGACAGCCTGCATCAAGCCA-CCACAGTTTGTCACCTGGACTT--------------------------------------GGATAAAGGAGGATCCCTTTATCTAAGTCCATCCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029894 238 + 64156825 GCTCTTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCAATCATCCTAAATGT-GCATTTCCGGCTGCAGCTCA--GACCTACCCA----CAGCCGACAGCCTGTATCAAGGCA-CCACAGTCAGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCTCTTTATATAGGATAAAGGAGGATCCCTTTATCCGAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCCTCAGCAT i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55055466 238 + 59248254 GCTCTTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCCATCATCCTAAATGC-GCATTTCCGGCTGCAGCTCA--GACCTACCCA----CAGCCGACAGCCTGTATCAAGGCA-CCACAGTCTGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCTCTTTATATAGGATAAAGGAGGATCCCTTTATCCGAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCCTCAGCAT i macFas5.chr19 I 304 C 0 s papAnu2.chr19 47157606 239 + 51301725 GCTCCTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCAATCATCCTAAATGC-GCATTTCCTGCTGCAGCTCA--AACCTACCCA----CAGCCGACAGCCTGTATCAAGGCACCCACAGTCTGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCCCTTTATATAGGATAAAGGAGGATCCCTTTATCCAAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAGCAT i papAnu2.chr19 I 302 C 0 s calJac3.chr22 45444419 200 + 49145316 GCTCCTCTACATCCTGCCCACAC-ACGGC-------CACTACTCTGACCATCCTAAATGCGGGGTTTCCTGCTGCAACTCCCTGCCCTACCCA----TAGCCAACAGCCTGCACCAAGCCG-T--CAGTTTGTCACCTGGACTC--------------------------------------AGATAAAGGGACCCTCCTTTATCCCAGTCCATCCCATCTTGCCCTGATCCACTTCAATTCTCCTCCAGCAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647962 176 - 122678785 GCTCTTCTACATCCTGCCCCCACTGCTGTAAAGAAGAACTCCTCAAAGTGTCCCAAATGCAGCATTTCCTGCTGGAGCTCT--GA-----------------------CTGTATCAAGCTG-CCACTGCCAGTCAGCAGGACTT--------------------------------------TGATCAAGGAGACCATCCT----------CATCCCTTCTTGCCCT-TTCTGTGACAATTCT--GTCAGTAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e chlSab2.chr6 46862045 565 + 50890351 I a score=95441.000000 s hg38.chr19_GL949748v2_alt 160670 67 + 1064304 ccagaacgagttttctttcttttcttttctttttttttt-gagatggaatcttgcccgggaaggccca s panTro4.chr19 59093376 68 + 63644993 CCAGAACGAGTTTTAtttcttttcttttctttttttttttgagatggaatcttgcccgggaaggccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970822 67 + 60714840 ccagaaccagtttttgttcttcttttttttttttttttt-gagatggaatcttgcccgggaaggccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740362 61 - 106955855 CCAGAACGAGttttcttt------tcctttttttttttt-gagatggaatcttgcctgggaagtccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030132 60 + 64156825 CCAGAACGAGTA-------tttttttatttctatttttt-gagacggagtctcgcccggggaggccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55055704 60 + 59248254 CCAGAACGAGTA-------tttttttatttctatttttt-gagacggagtctcgcccggggaggccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157845 63 + 51301725 TCagaacaagtatt--ttttttttttttttttttttttt-gagacggagtctcgctctgt--ggccca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45444619 60 + 49145316 CCAGAAT-AGTGT------TTTTTTTTTTCTTTTTTTTT-GAGATGGCATCTCACCTGGGGAGGCCCA i calJac3.chr22 C 0 M 576 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e chlSab2.chr6 46862045 565 + 50890351 I a score=428579.000000 s hg38.chr19_GL949748v2_alt 160737 280 + 1064304 ggctggagtgcaatggcgggatcttggctcactgcaacctccaccttccaggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggtgtgagccaccacacccggctcatttttg-tatttttagtagagacggagttttaccatgttggccaggatggtctcaaactcctaacctcaggtgatctacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgcagctggcctagaatgagtatttctattt--gttt s panTro4.chr19 59093444 276 + 63644993 ggctggagtgcaatggcgggatcttggctcactgcaacctccaccttccaggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggtgtgagccaccacacccggctcatttttg-tatttttagtagagatggagttttaccatgttggccaggatggtctcaaactcttgacctcaggtgatctacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgcagctggccTAGAACGAGTAtttctattt------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970889 279 + 60714840 ggctggagtgcaatggtaggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcagcctcc-gagtagctgggattacaggcatgcgctaccacacccggctcatttttg-tatttttagtacagacggggttttaccacgttggccaggatggtctcaaactcctgacctcaggtgatctacccacgtcagcctcccaaagttctgggattacaggcgtgagccaccgcagctggcctagaacgagtatttctatgt--gttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740423 280 - 106955855 ggctggagtgcaatagcgggatcttggctcactgcaacctctaccttccaggttcaagcaattctcctacctcagcctcctgagtagctgggattacaggtgtgagccaccacacctggctcatttttg-tatttttagtagagacagggttttaccatgttggccaggatggtctcaaactcctgacctcaggtgatctactcgcattagcctcccaaagtgctgggattacaggtgtgagccaccgcagctggccTAGAACGAGTAtttctattt--attt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030192 275 + 64156825 ggctggagtgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccac-tctggctcatttttt-tatttttagtagagatggagttttaccatgtcggccagactggtctcaaactcctgacctcaggtaatccacccgcatcagcctcccaaagtgttgtgattaaaggcgtgagccaccgcacctggccTAGAACGAGTAtttctattt------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55055764 275 + 59248254 ggctggagtgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccac-actggctcatttttt-tatttttagtagagatggagttttaccatgttggccagactggtctcaaactcctgacctcaggtaatccacccgcatcagcctcccaaagtgttgtgattaaaggcgtgagccaccgcacctggccTAGAACGAGTAtttctattt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157908 258 + 51301725 ggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcccgccagtctcctgcctcagcctcccgagtagctgggactacaggcgcccacaaccgcgcccggctaattttttgtatttttagtagagacgaggtttcaccg------------tggtctcgatctcctgacctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccta-------tttttttattttt---- i papAnu2.chr19 C 0 I 176 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M e chlSab2.chr6 46862045 565 + 50890351 I a score=57530.000000 s hg38.chr19_GL949748v2_alt 161017 32 + 1064304 atttatttttgagatggagttttgctcttgtt s panTro4.chr19 59093720 32 + 63644993 atttatttttgagatggagttttgctcttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971168 32 + 60714840 atttatttttgagacggagttttgctcttgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740703 32 - 106955855 atttatttttgagacggagttttgctcttgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030467 32 + 64156825 atttatttttgagacggagtttcactcttgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056039 32 + 59248254 atttatttttgagacggagtttcactcttgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158342 32 + 51301725 atttatttttgagacggagtttcgctcttgtc i papAnu2.chr19 I 176 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M e chlSab2.chr6 46862045 565 + 50890351 I a score=149642.000000 s hg38.chr19_GL949748v2_alt 161049 66 + 1064304 gcccaggctggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa s panTro4.chr19 59093752 66 + 63644993 gcccaggctggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971200 66 + 60714840 gcccaggttggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740735 66 - 106955855 gcccaggctggagtgcaatggtacgatctcagctcaccaaaacctctgcatcctgggttcaagcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030499 66 + 64156825 acccaggctggagtgcaatggcgcgatgtcagctcaccacaacctctgcctcctgggttcaagcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056071 66 + 59248254 acccaggctggagtgcactggcgcgatctcagctcaccacaacctctgcctcctgggttcaagcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158374 66 + 51301725 acccgggctggagtgtagtggcgcgatctcagctcaccacaacctctgcctcctgggttcaagcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862610 66 + 50890351 gcccaggctggattgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaa i chlSab2.chr6 I 565 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M a score=562965.000000 s hg38.chr19_GL949748v2_alt 161115 194 + 1064304 ttctcctgcctcagcctcccgagtagctgggattacaggtatgtgccaccacgcccagctaatcttttgtatttttagtagagacagggtttctccattttggtcaggctggtcttgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggca-ttacaggcgtgagctactgtgcccag- s panTro4.chr19 59093818 194 + 63644993 ttctcctgcctcagcctcccgagtagctgggattacaggtatgcaccaccacgcccagctaatcttttgtatttttagtagagacagggtttctccattttggtcaggctggtcttgaactcccggcctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctactgtgcccag- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971266 194 + 60714840 ttctcctgcctcagcttcctgagtagctgggattacgggcatgcgccaccatgcccagctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctaccgtgcccag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740801 194 - 106955855 ttctcctgcctcggcttcccaagtagctgggattacaggcatgcgccaccacgcccagctaattttttgtatttttagtagagacaaggtttctccattttggtcaagttggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctactgtgcccag- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030565 194 + 64156825 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcgccaccacgctcagctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056137 194 + 59248254 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcgccaccacgcccggctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158440 194 + 51301725 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcaccaccacacgcagctaattttttgtattttcagtagagacagggtttctccattttgatcaggctggtctcaaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862676 192 + 50890351 ttctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccacact-ggctca-tttttgtatttttagtagagacagagttttaccatgttagccagactggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgttggga-ttacaggcatgagccaccgcgcccgg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445255 193 + 49145316 ttctcctgcctcagccttcccagtagctgggattacaggtatg--ccaccacacctggctca-tttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgactgcaggtgatccacctgcctcagcctcccaaagtgctgggatttacaggcgtgagcctctgcacccggc i calJac3.chr22 M 576 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C a score=460246.000000 s hg38.chr19_GL949748v2_alt 161309 149 + 1064304 ccagaacgagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaaaaatcccctcttccagcagatctcaatcctccacgggaagaagtccaatgtcctcacggtctccagccaggcctagcacggtgtcag s panTro4.chr19 59094012 149 + 63644993 ccAGAACGAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAAATCCCCTCTTCCAGCAGATCTCAATCCTCCACGGGAAGAAGTCCAGTGTCCTCAAGGTCTCCAGCCAGGCCTAGCACGGTGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971460 149 + 60714840 ccagaacgagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaaaaatcccctcttacagcagatctccgtcctccacaggaagaagtccaatgtcctcacggtctccagccaggcctagcatggtgtcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740995 149 - 106955855 ccAGAACGAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAAATCCCCTCTTCCAGCAGATCTCAGTCCTCCACGGGAAGAAGTCCAACGTCCTCACGGTCTCCAGCCAGGCCTAGCACGGTGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030759 146 + 64156825 ccagaacaagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaatgatcccctcttccagcagatctccgtcctccgtgg---gaagtccaaagtcctcacggtcgccagccagacctagcatggtgtcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056331 146 + 59248254 ccAGAACAAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAATGATCCCCTCTTCCAGCAGATCTCCGTCCTCCGTGG---GAAGTCCAACGTCCTCACGGTCGCCAGCCAGACCTAGCATGGTGTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158634 149 + 51301725 ccagaacaagtatttttaaacatttaaaactggTCACATTGCCTCTTCTGGCAGCAAACCAAAGATCCTCTCTTCCAGCACATCTCCGTCCTCCGTGGGAAGAAGTCCAAAGTCCTCACGGTCGCCAGCCAGACCTAGCATGGTGTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862868 149 + 50890351 ccAGAACAAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAGATCCCCTCTTCCAGCAGATCTCAGTCTTCCATGGGAAGAAGTCCAAAGTCCTCACGGTCACCAGCCAGACCTAGCATGCTGTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445448 148 + 49145316 cCAGAACAAGTATTTTTAAACATCTAAAACTGGTCACATCTCATCATTTGGCAGCAAACCAAAAATCACCTC-CCCAGCAGCGCTCAGTCCTCCATGGGAAGAAGTCCAGAGTCCTCATGGTTGCTGGCCAGGCCTAGCACGGTCTCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19648138 111 - 122678785 CCAGAGCA--TATTTCCAAACACATAAACCTGGTCCCATTACCTCTTCTGGCAACAAACCAAAAGACCACTC--CCAGTGGCTCCTGGGCCCC----ATAAGAAGCCCAAAGCCCACAC------------------------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=929820.000000 s hg38.chr19_GL949748v2_alt 161458 298 + 1064304 ccctgctgcctGTTCCCTTTTGCTCGTCC--------------CAGAAA----GTGGATGTGGCTGGTGTA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTGCG-GCCTGAAATGCTCCTCCACGAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCACTGAGCT--CCCACAGGGCACACTGAATGCTGGGAAGGC--CA--CTCCCTACCTAGCATGACTGCTGTGTTCACGGATAAGCCGC--------------CAG-----------TAGGAAACCAtgactctgtgggtctggggtgggccctagg----attctgtttttacccctcttcccaggtg s panTro4.chr19 59094161 298 + 63644993 CCCTGCTGCCCGTTCCCTTTTGCTCGTCC--------------CAGAAA----GTGGATGTGGCTGGTGTA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTGCG-GCCTGAAACGCTCCTCCACGAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCACTGAGCT--CCCACAGGGCACACTGAATGCTGGGAAGGC--CA--CTCCCTACCTAGCATGACTGCTGTGTTCACGGATAAGCCGC--------------CAG-----------TAGGAAACCAtgactctgtgggtctggggtgggccctggg----attctgttttcacccctcttcccaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971609 298 + 60714840 ccctgctgcccgttccctttTGCTCGTCC--------------CAGAAA----GCGTATGTGGCTGGTGCA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTACA-GCCTGAAATGCTCCTCCACTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCGCTGAGCT--CCCACGGGGCACACTGAATGCTGGGGAGGC--CA--CTCCCTACCTAGCATGACTGCCGTGTTCACGGATAAGCTGC--------------CAG-----------TAGGAAACCGtgagtctgtgggtctggggtgggccctggg----attctgttttcacccatcttcccaggtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102741144 300 - 106955855 CCCTGCTGCCCATTCCCTTTTGCTCGTCC--------------CACAAA----GTAGATGTGGCTGGTGCA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTACG-GCCTGAAATGCTCCTCCACTAACCCCTCTCTCATCCAACCCACTGCTGCC-ACCGCTGAGCT--CCCACGGGGCACATTGAATGCTGGGAAGGCCACA--CTCCCTACCTAGCATGAGTGCCGTGTTCGCGGATAAGCCGC--------------CAG-----------TAGGaaatcgtgactctgtgggtctggggtgagccctggg----attctgttttcacccaccttcccaggtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030905 303 + 64156825 ccctgctgcccattcccttttgctcttcc--------------cAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGgaaactgtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056477 303 + 59248254 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGGaaactgtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158783 303 + 51301725 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGCATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCTTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGTGGGGCACACTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAACCTC--------------CAG-----------TAGGAAACTGTGACTCTGTGGGTCTGGGGTGGGCCCTGGG----AGTCTGTTTTCACCCATCTTCCCAGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46863017 303 + 50890351 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTATG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCTCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGGAAACTGtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccgggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445596 299 + 49145316 TCCTGCTGCCGGTTCCCTTCTGCTCCTCC--------------TCGAAA----GCTGATGTGGCTGGTGCA--GTCTGCAGAACCCAGCCTGCTCCTCTCCACACA--T-GGTCCCTACG-GCCTGAAATGCTCCTCCTCTAACCC--CTCTCACCCAGCCCACTCCTGCC-ACTGCTAAGCT--CTTGCAGGGAACACTGAATGCTGGGGAGCC--CA--CTGCCTACCTAGCATGACCACTGGGTTCACTGATAAGCCGC--------------CAG-----------GAGGAAACCATGACTCTGTGGGTCT-TGGTGGGCCCTGGG----AGTCTGTATTCACTCGTTTTCCCAGGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3690308 333 + 145441459 CCCTATGGCCTGGCTTCCGTTGCCCTTTCAACCACGTGTTATTCAGAAAGTGCGTGGACGTGGCAAGCATA--GTTTGCAATGCCCAGCCTGTTCCTATCTACATGTGTAGGTTCGTACACACCCAAAAGGCACTTCTTCCAA-----TGCACAGCTGACCAATCTCTGCCTAATGTTGTGTC--TGCCATAAGAACAAAGATGTCTGGAGAAAC--CA-GTTCTCCACCTGGCTGGAC-----TGTCCATGGCTACGTTGCTGGAGCCTAGAACATAG-----------CAAGAGCTCACGACTGTTGTAGTCTGGGCTAGGCACTGAGGACCACTCACTTCTTGCCC-TTTTCTTAGGTG i mm10.chr7 I 1564 I 219 s canFam3.chr1 19648249 313 - 122678785 --CTTGGGCCCATTCCCCTTCCTTCTCCCGA------------TGTACA----CTCGCTATGGCTGGCACACCGTTGATGCAACCCAGCCTGCTcccttccacaccc---tggtcctaca-tcctgaaaggctctccctccaa-----ctctttgctgaccaactcctgcc-tgtccttGCCTTGCCACCCGAGAACCTGGGACGCTGAGGACAC--TGGGTTCACAACCTTGTGTGACTTTCCTGTGCCCTGATATGTTGC--------------TGGAGCCTTGCACATGGGaaatcctgacttt-tcagtctggggtggggcctggg----aatctgctttcactcattctcccaggtg i canFam3.chr1 C 0 C 0 a score=2637026.000000 s hg38.chr19_GL949748v2_alt 161756 774 + 1064304 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gttccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccaatGGCACCTACTGTTACC-TATGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAGGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCG--------------------GGGAGCCACT---GAAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCACTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCATTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAGCTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG----GACAGGAGGGTGGATGTAGGGACCGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAGAAACACACACCAACAG---AGAAT-------GA----GGTTAAGAGAAGCTTCAGG s panTro4.chr19 59094459 777 + 63644993 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccaatGGCACCTACTGTTACCCTGTGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAAGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCG--------------------GGGAGTCGCT---GAAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAGCTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--AGGACAGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAGAAACACACACCAACAG---AGAAC-------GA----GGTTAAGAGAAGCTTCGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971907 781 + 60714840 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctgc----agagattcaaggacagcatgttggtaaaccacccggctg----ggcctctggcacaccgcaagcacccagtGGCACCTACTGTTACCCTATGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAACGGCATGTGAATGGGGAATGCTGTTTCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCA--------------------GGGAGCCGCT--GGAGGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGCGGCAAGCCCCAAGTCTGACCTTCAGTGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCACGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCGCTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--GGGACAGGAGGGTGGACGTAGGGACAGAATGGGTATGACTGAAACAGTGGGAGAAGAGGCTCAGCCACACAGAAACACACACCAACAGACAAGAAT-------GA----GGTTAAGAGAAGCTTCGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102741444 779 - 106955855 atTAGGACCTAGACCTGGA---T-CCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccagtGGCACCTACTGTTACACTATGTGGGT-------------TATTTCCCCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAGGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGCCCCAC-CCCCAGGGTGTGTAGGAGGTAAAATCCCG--------------------GGGAGCCGCT---GGAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACTCACTCCATCAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--AGGACAGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAAAAACACACACCAACAGAGAAGAAT-------GA----GGTAAAGAGAAGCTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60031208 777 + 64156825 actAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caacaagtaccttttccccagagctggtttttctcctttgcagaatagctagctac----agagattcaaggacagcatgttggtaaaccacccggctg----ggcctctggctcacagcaagcacccaatGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------CGGAGCGGCT---GGAGGGG-------------GAGGTAAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGTGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCATTCAGAGACAGAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GATTCAGAGAAGCTTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056780 777 + 59248254 aCTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACCTTTTCCCCAGAGCTGGTTTTTCTCCTTTGCAGAATAGCTAGCTAC----AGAGATTCAAGGACAGCATGTTGGTAAATCACCCCGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------CGGAGCGGCT---GGAGGGG-------------GAGGTAAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGTGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCATTCAGAGACAGAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GATTCAGAGAAGCTTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159086 777 + 51301725 ACTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACTTTTTCCCCAGAGCtgctttttctcctttgcaaAATAGCTAGCTAC----AGAGATTCAAGGACAGTATGTTGGTAAACCACCCAGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTAACCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------gggagcggct---ggagggg-------------gaggtaaagtggggag----gtgaaggggcccacagggaggctggagg-ggagTGGCAAGTCCCGAGTCTGACCTTCAGCGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GAG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCTCATTCATTCagagacagaaacacagaagggcagagagagaggacTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAgccacacagaaacacacagcaACAGAGAAGAAC-------GA----GGTTCAGAGAAGCTTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46863320 777 + 50890351 aCTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACCTTCTCCCCAGAACTGGTTTTTCTCCTTTGCAGAATAGCTAGCTAC----AGAGATTCAAGGACAGCATGTTGGTAAACCACCCAGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCTATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------GGGAGCGGCT---GGAGGGG-------------GAGGTGAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCAGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCGCAACTCTCCCCATTCATTCAGAGACAAAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGATGGAATGAGTATGACTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GGTTCAGAGAAGCTTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445895 765 + 49145316 TGAAGGAGCCAGACCTGGG---TGTCCTAGTTTTTGAAGGTACTT-CACCAAGTACCTTCTCCCCAGAGCTGGTTTTTCTCCTTTGCAACACAGCTGGCTGC----AGAGATTCCAGGAGAGCACGTGAGTAAA-CACCCAGCTG----GGCCTCTGGCACACCACAAGCACTTAATGGCACTGACTGTTACCCTCCATGGGC-------------CATTTCTTCACCCCA-GGAGGGGCTGAGAGGTGAAGACCTGCCCAGGGGCATGTGAATGGGGAATCCTA--CCCAGGGCAGCAGGTGGGGTGATGTCCCAC-CCCCAGGGTGTGTGGGAGGTAAAATCCCC--------------------CGGAGCAGCT---GGAGGGGAGTAGTGAGCCCCGAGTCAGAGTAGTGAGCCCCGAGTCGGAG----TAGTGAGCCCCGAGTCGGAGTAGTGAGCCCCGAGTCTGACCTTCAGCGTGAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTAGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGGGCCAGAGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGTCGTGGTGGGCACAGAGGTCTCGGCCTTGGCCTCCC-----------------------TGTCCCCCAGCTCTCCCCATTCGTTCAGAGACAGAA--ACAGACGGGCAGAGAG--AGGACTGGAGGGTGGATG--GAGATGGAATGAGTATGACTGAAAC---GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAT-------GA----GGTTCAGAGGAGCTTCGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3690860 723 + 145441459 atgaaaaaCCAAACCTGCACTTTGTCCCAGCTTT---GAGCCCTTGGGCCGGATACCTTCTCTATAGAG-TAATTTTCCTCCTTGG-AGGACGGTTTGCTAC------AGACTCAAGAAGAGCATGTTAGCAAAACACACTGGGGAGGAAGATTCTAGGT--------GTGCCAAATGGC---TTGTGATAGAGCACTCAGGT-------------TATCTCCTTATCCTG-CAATGAGTGGAGAGGTGAAGACTTGCTCCAGAGGATGTGGGAGGTGAACTCTGTCCCCAG-------GGAGAAATGAAGTCCCAA-GCTTAGGGTTTGTGAAAGATAAAACTCCACAGCCCT--CCCCCTACTATGAGAAAGTCT---GGGAGGA-------------GA----AAGCAAGGAG----GCTCCCCAGCTCCCAGGGAGACTAAAA--GAAGTAGTGTTCGCCAAGTCTCACCTTCAGTGTCAACAGCAGCTGGACAGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAAGAGGAGATAGGAGAAGGTCCAGGCAAGAGCCAGGGCATGGCAGGAGCTAGGA-CAGAGGTGGGAAGT-CATAATGTTGGGTACAGGGACCTTAGCCTCTGTTTCCTTCTCCTGAGAT----------ACCCACCCCCGCCCCTGCCCA--CATTCAGACAGAGAA-----GAAGAGGTGAGAA----GACTGGTGAGT-----------------------------AACAGAGACAGAAGAGGCACAGCCAGAGATA-------------AGAAAAGAAT-------GACCGGCATTAAGAGAAGCTTCTGG i mm10.chr7 I 219 I 59 s canFam3.chr1 19648562 700 - 122678785 atAAAGAGCCAGACATCGG---TGTCCTGGTTCT---GTGCCCTT-AGAGAAGTGCTTTCTCTCCAAAGCTGTTTCTCCTACCTTGCTAAATGGTTTGCTACCAACACATGCTCCTGGAGAACACGTTGGTAAAGCACTTAGCT-----CACCTCTGGCAAATGGCAAACACC----------TACGGTTACATTACATAGATGGGGGTGTGGGTGTACTTCTCTACCCCAGGGAATAGCTGAGAGGTGAAGATCTGCCCCAGAGCATG------------------------------AAGGAGGTACCTTCCCACGTCCTGGGGTGCGGGGGAGGTAAGACCCCACTTCCCCTGCTCCCCAC---GGGAGTAGGTCGGGAAGGAG-------------GAGGTGAAAA-TGGGA----GTTCAAGGGTACAAAGAGGGGCTGGAGG-GG--------------CATCTGACCTTGAGTGTGAGCAGCAGCTGAACCGCATTGGTGAAGGGTGTGGGGGTGGGGAGGCCCAGCAGGCCGAGCGCACGGAAGAACAGCAGGTACGAGAAGGTCCAGGCCAGGGCGAGGGCGTGGCAGGAGCT-GGGACAGAGGAAGGCCGCAGGCTGTGTTTGGTGCAGGGCCCTT-GCCTCTGCCTCCC----CCAGAGTCTAGCTCCAGAACCTCCCCCACCACCACTCC-------------------------------------AAAAATGGGGGGTGGT--------------------------------AGAAGAAGGGGCGCAGCCCCACAGAAATGTGCCATGCCAGAGAAGAGCATGAGAAGG----GGTCAGGAGAAGCTTTAGG i canFam3.chr1 C 0 I 1 a score=402706.000000 s hg38.chr19_GL949748v2_alt 162530 126 + 1064304 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCGAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACCTCTCTCCATG---- s panTro4.chr19 59095236 126 + 63644993 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACTTCTCTCCATG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972688 126 + 60714840 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAGGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACCTCTCTCCATG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742223 126 - 106955855 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCTGGGCCAGCAGACACAACGTCCACCTCTCTCCATG---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60031985 126 + 64156825 TGAAGACCCTGCACTCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057557 126 + 59248254 TGAAGACCCTGCACTCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159863 126 + 51301725 TGAAGACCCTGCACTCCTccgctttttctttatttccaaggTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864097 126 + 50890351 TGAAGACTCTGCACTCCTCCGCTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATCGCAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446660 122 + 49145316 TGAAGACCCTGCAATCCTTCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGCTGGAT-----ATGAATATGAATGGTGGCGGGGCCAGCAGACACACTGTCCTTTTCTCTCCATG---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649263 125 - 122678785 TGAAAACCCACAGGGCCTCCATCTTTTCTG------CAGGAGGCGAGAAAAAAGGAGGGAGAAAGAGACATAATACAAACACGAATGGTGGCAGGGCCAGCACACAAACGCCCCTTCCTCCTGAATACAGG i canFam3.chr1 I 1 C 0 e mm10.chr7 3691583 59 + 145441459 I a score=125141.000000 s hg38.chr19_GL949748v2_alt 162656 35 + 1064304 ACATGGATGTAGCGGACTGGGACAAACACACAGGG s panTro4.chr19 59095362 35 + 63644993 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972814 33 + 60714840 ACATGGATGTAGCGGACTGGGACAA--ACACAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742349 35 - 106955855 ACGTGGATGTAGCGGACTGGGACAAACACACAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032111 35 + 64156825 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057683 35 + 59248254 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159989 35 + 51301725 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864223 35 + 50890351 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446782 28 + 49145316 ACATAGATGTAGCAGACTGGGACAAACA------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3691642 35 + 145441459 ACATGGATACTGAGGACTGGGGCAAAGACACAAGG i mm10.chr7 I 59 I 24 s canFam3.chr1 19649388 31 - 122678785 ATCTGGATGTTAAGGATCAGGTCAATCGCAC---- i canFam3.chr1 C 0 C 0 a score=230043.000000 s hg38.chr19_GL949748v2_alt 162691 91 + 1064304 ACCAGACGCAGAAGGCAGGGGAGAAAGAAAAGCAGATGA--Aggccggatacggtggctcacgcctgtaatcccagcactttggaaggctgag s panTro4.chr19 59095397 91 + 63644993 ACCAGATGCAGAAGGCAGGGGAGGAAGAAAAGCAGATGA--Aggccggatgcggtggctcacgcctgtaatcccagcactttggaaggctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972847 91 + 60714840 ACCAGACACAGAAGGCACGGGAGGAAGAAAAGCAGATGA--Aggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742384 91 - 106955855 ACCAGACGCAGAAGGCAGGGGAGGAAGAAAAGCAGATGA--Aggccgggcgcggtggctcacgcctgtaatcccagcactttgggtggctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032146 93 + 64156825 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtgtggtggctcacgcccgtaattccagcactttgggaggctgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057718 93 + 59248254 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtgtggtggctcacgcccgtaattccagcactttgggaggctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160024 93 + 51301725 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAagaggctgggtacggtggctcacgcccataattccagcactttgggaggctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864258 93 + 50890351 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtatggtggctcatgcccgtaattccagcactttgggaggctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446810 83 + 49145316 --------CAGAAGGCAACGGGGGAAGAGAAACAGATGA--Gggccaggccaagtggctcatgcctgtaatcccagcactttgggaggtgaag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649419 9 - 122678785 ------------------------------------------------------------------------------------AGGGATGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I a score=261103.000000 s hg38.chr19_GL949748v2_alt 162782 96 + 1064304 gtgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacatggagaaaccccgg----------------------------------------------------------------------------------------ctctattaaaaattcaagattagccaggcgtggtgg s panTro4.chr19 59095488 96 + 63644993 gcgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacatggagaaaccccgg----------------------------------------------------------------------------------------ctctattaaaaattcaaaattagccaggcgtggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972938 96 + 60714840 gcgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacacggagcaaccccgt----------------------------------------------------------------------------------------ctctactaaaaattcaaaattagccaggcgtggtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742475 96 - 106955855 gcgggcagatcac--aaggtcacgagttcgagatcagcctgaccaacatggagaaaccccgt----------------------------------------------------------------------------------------ctctactaaaaattcaaaattagccaggcgtggtgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032239 96 + 64156825 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactgaaaatacaaaattagccaggcatggtgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057811 96 + 59248254 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactgaaaatacaaaattagccaggcatggtgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160117 96 + 51301725 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactaaaaatacaaaattagccaggcatggtgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864351 96 + 50890351 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactaaaaatacaaaattagccaggcatggtgg i chlSab2.chr6 C 0 I 1731 s calJac3.chr22 45446893 186 + 49145316 gcaggcggatcacctgaggtcaggggttcgagacacacctggccaacatggagaaacccagtctctttttttaaaattgtttttattttttaaaCTTTTTACCTGTAATTTACAACCATTTTCTTTTTCTTCTTATTTATTTGCTTCAGCctctactaaaaatataaaattagccaggcgtggtgg i calJac3.chr22 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e canFam3.chr1 19649428 0 - 122678785 C a score=122931.000000 s hg38.chr19_GL949748v2_alt 162878 53 + 1064304 agcatgcctgtagtcccagctacttgggaggctgaggcaagagaatcgcttga s panTro4.chr19 59095584 53 + 63644993 agcatgcctgtaatcccagctacttgggaggctgaggcaagagaatcgcttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973034 53 + 60714840 cgcatgcctgtaatcccagctactcgggaggctggggcaagagaatcgcttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742571 53 - 106955855 cgcatgctggtaatcccagctactcgggaggctggggcaagagaatcgcttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032335 53 + 64156825 tgcatgcctgtaatcccagctacgcgagaggctggggcaagagaatcgcttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057907 53 + 59248254 tgcatgcctgtaatcccagctactcgagaggctggggcaagagaatcgcttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160213 53 + 51301725 tgcatgcctgtaatcccagctactcgggaggctggggcaagagaatcgtttga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45447079 53 + 49145316 cgcatgcctgtaatcccagttactcaggaggccgaggcaggagaatcacttaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e canFam3.chr1 19649428 0 - 122678785 C e chlSab2.chr6 46864447 1731 + 50890351 I a score=83384.000000 s hg38.chr19_GL949748v2_alt 162931 39 + 1064304 accc-gggaggtggaggttgcagtgagccaagatcgtgcc s panTro4.chr19 59095637 39 + 63644993 accc-gggaggtggaggttgcagtgagccaagatcgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973087 39 + 60714840 accc-gggaggtggaggttgcagtgagccgagatggcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742624 39 - 106955855 accc-gggaggtggaggttgcagtgagccaagatcgcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032388 39 + 64156825 acct-gggaggtggaggttgcagtgagctgagatcgcacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057960 39 + 59248254 acct-gggaggtggaggttgcagtgagctgagatcgcacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160266 39 + 51301725 accc-gggaggtggaggttgcagtgagctgagatcgcacc i papAnu2.chr19 C 0 M 776 s calJac3.chr22 45447132 40 + 49145316 acccggggaggtggaggtggcagtgagctgagattgtacc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649428 9 - 122678785 ACCC-AGAAG------------------------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e chlSab2.chr6 46864447 1731 + 50890351 I a score=121053.000000 s hg38.chr19_GL949748v2_alt 162970 105 + 1064304 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaaagaaagaaagaaaaacaaacaaACAAACAAACATGAAACAGAGAAATGAGCTGATC s panTro4.chr19 59095676 93 + 63644993 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaaagaaagaaa------------aacaaacaaaCATGAAACAGAGAAATGAGCTGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973126 104 + 60714840 actgaactgcagcctgggcgacaggagcgaaactccatctcaaaaaaaaaagaaagaaagaaaagaaaa--aaATAACAAACATGAAACAAAGAAATGAACTGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742663 95 - 106955855 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaatgaaagaaaga----------aacaaacaaaCACGAAACAGAGAAATGAGCTGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032427 99 + 64156825 attgaactccagcctgggcaataagagcgaaactccatctcaaaaaagaaagacagaaagaaaa-------aaaaaaaAAACATGAAACAGAGAAGGGAGCTGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057999 99 + 59248254 attgaactccagcctgggcaataagagcgacactccatctcaaaaaagaaagaaagaaagaaag-------aaaaaaaAAACATGAAACAGAGAAGGGAGCTGATC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45447172 86 + 49145316 actgctctccagcctgggcaacaagagtgaatttccgtctcagaaaagaaaagaaga--------------aaCAG------ATGACACAAAGAAACAAACTGGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649437 54 - 122678785 ------------------------------------------AAAAGGCACGAGAGGAAGAGA--------AACAGACCAA-ACGACACAGTGAGTTCAGA-GATA i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=176406.000000 s hg38.chr19_GL949748v2_alt 163075 91 + 1064304 AACAAG--------AGACAGCTAGAGATGAGGCAGAAGCTGAAAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------cctctcccctcctctccctctcctc s panTro4.chr19 59095769 91 + 63644993 AACAAG--------AGACAGCTAGAGATGAGGCAGAAGCTGAAAAAGACTCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTCCCCTCCTCTCCCTCTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973230 91 + 60714840 AACAAA--------AGACAGCCAAAGACGAGGCAGAAGCTGAGAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------CCTCTCCCCTCCTCTCCCTCTCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742758 91 - 106955855 AACAAG--------AGACAGCCAGAGATGAGGCAGAAGCTGAGAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------cctctcccctcctctccctctcctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032526 99 + 64156825 AACAAGAGACAGCCAGACAGCCAGAGATGAGGCAGAAGCTGAAAAAGACCCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTGCCCTCCTCTCCCTCTCCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058098 99 + 59248254 AACAAGAGACAGCCAGACAGCCAGAGATGAGGCAGAAGCTGAAAAAGACCCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTGCCCTCCTCTCCCTCTCCTC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45447258 101 + 49145316 AACAAG--------AGACAGCCAGAGATGAGGCAGAAACTGAGAAAGACACAGAGAGGAAACAGGTTGCTTCCCTctttcccttcctctcccctcctctccctctcttc i calJac3.chr22 C 0 I 1268 s mm10.chr7 3691701 87 + 145441459 AGCGAC--------ACACAGTAAGAT-TAAAGGAGAAGAAATAGAAGACTCGAAGAGGAAACAGACTGCTGCTT-----------CTCTGCATCCTTCTTCCTTTCT-- i mm10.chr7 I 24 C 0 s canFam3.chr1 19649491 56 - 122678785 AGCAAG--------AGATGTCCAGAGA-----CAGAGGCAGAAAGGGAC----AGA---------------CCT----------CCTCCCCACTCCTC----------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=411743.000000 s hg38.chr19_GL949748v2_alt 163166 128 + 1064304 cctcCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCTCC s panTro4.chr19 59095860 128 + 63644993 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973321 128 + 60714840 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742849 128 - 106955855 cctcCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032625 128 + 64156825 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058197 128 + 59248254 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45448627 128 + 49145316 cctccctcAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAATAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i calJac3.chr22 I 1268 C 0 s mm10.chr7 3691788 127 + 145441459 -CACCACCTAGTTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTTCCCAAGATGGTGATCAGAGAATGCAAACTGTGGGGGCCACAGGTGAATAAGGTGAGCCCCAGGCCCACAGCTGCTGCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19649547 128 - 122678785 CTCCCACCAAATCCTCACCAGGGCTGGGCCTGGATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCGCAGGTGAACAAGGTGAGCCCCAGGCCCACGGCTGCTGCCCC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=882135.000000 s hg38.chr19_GL949748v2_alt 163294 269 + 1064304 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT---------------------CCCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG s panTro4.chr19 59095988 269 + 63644993 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT---------------------CCCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973449 268 + 60714840 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCAATGGGGATGGAGATAAGAAGAACCACTAGATATGTCCATTCTTCAGGCGACATGGTCTGGGGGAAGGGCAGAGATTCACAGTGAGAACCCAGGaatccaggccccctgcctcctccctctacgaggatccaggaatccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742977 268 - 106955855 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCCCTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATAGGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCGGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032753 268 + 64156825 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCTGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCCAGGATCCAGGAACCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058325 268 + 59248254 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCCAGGATCCAGGAACCCAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46866178 268 + 50890351 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CTCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i chlSab2.chr6 I 1731 C 0 s calJac3.chr22 45448755 229 + 49145316 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGAATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCC-TTATTTTCCACTGGGGAGGGAACCTGACTCACCAGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGAGACATGGTCTGGGGGAGGGGC--AGATTCACTGTGAGAACCCAGGAATCCAGG------------------------------------CAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3691915 233 + 145441459 CCATCTCTTCAGCCCAGGTCCTGAAAGGAAAAGGTAAAGTATAAGCCTAGAACCTTCGGGAGGGGTGATTCCCCACC---CCAGCTCCCTCACCCTAATTTTCCACTAGACAAGGAACCTGACTCACCAGCTTTCTTAAAGAGGAAGCCAACAGGGATGGAGATAAGAAGGACCATTAGATATGTCCATTCTTCGGGTGTCATGGTCTGGGGGAGG---AAGGACTCACAGTGAGAACC--------------------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19649675 262 - 122678785 CCATCTCTTCAGCCCAGGTCCTGCAAAGAGAAGGGAGAGCATAAGCCTGGAACCTTCCAGGGAGC-----TCCTGCCGGGTTCCCCCCCCCTCCCCCAGTTTCCACTAGGGAGGGAACCTAACTCACCAGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATGAGAAGCACCACTAGATAAGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGGTTCCTAGTGAGGCCC-----------------------CTCCCCCCTGGAGGGTTCAGGAACCCAC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47160305 776 + 51301725 M a score=1690470.000000 s hg38.chr19_GL949748v2_alt 163563 542 + 1064304 --CCTTCTAGACCCCAGTTTTTGAGGATGATGGAGTATGAGCCTCAGCTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCC--CTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTGTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAAGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACGGCACCCCTCCCGG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGCCCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTCT------TCGAGACCACCCAGAGGAGCCC-GGGTCTCCAACCT-GCACCTCCT----TCGGAGCTCCACACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC s panTro4.chr19 59096257 542 + 63644993 --CCTTCTAGACCCCAGTTTTTGA---TGATGGAGTCTGAGCCTCAGCTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCC--CTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTGCCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAAGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACGGCACCCCTCCCGG-ACCGTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGCCCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCCCTTGTGAAACCAGATATCCGGACC-ACCCAGCCCTTCT---CCTTCGAGACCACCCAGAGGAGCCC-GGGCCTCCAACCT-GCACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973717 545 + 60714840 --ccctctagaccccagtttttgaggatgatggagtccgagcctcagctcctctcctttgagaacctagcaacacaga-ctccagccccttcctccttggaggagacaggaatcca-cccccagccc--ctcctTT--GAGAGCACAGGCCTCCAGCTCTCCTCTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAGGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACGCATACTACGGACCCAGATTTGAAGACGCCTCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCGG-ATCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGA-CCCCCTCTTCCAC---CGAGGATCCAGGAACCCAGACCACCTCTTTGGATCCCCCAT---CCCCGGCCCTTGTGAAACCAGATATCCGGACC--CCCAGCCCTTCTTCTCCTTCGAGACCACTCAGAGGATCCC-GGGCCTCCAGCCT-GCACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCAGGGATCGAACACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102743245 548 - 106955855 --CCCTCTAGACCCCAGTTTTTGAGGATGTTGAAGTCTGAGCCTCAGTTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCCCTCTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAGGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCACATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCGG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACTTCCGAGCCCCCTCTTCCAG---AGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--TCCCCGGCCCTTGTGAAACCAGATATCCGGACCCCCCCAGCCTTTCT---CCTCCGAGACCACCCAGAGGAGCCT-GGGCCTCCAGCTT-GCGCCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60033021 543 + 64156825 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGagtccgagactcagctcctctcctttgagaacctaggaacccgga-ctccagccccttcctcctt---ggagacaggaatcca-cccccagcccctcTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCAGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-GGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGGGGATCGGACACCC i rheMac3.chr19 C 0 M 287 s macFas5.chr19 55058593 543 + 59248254 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGagtccgagactcagctcctctcctttgagaacctaggaacccgga-ctccagccccttcctcctt---ggagacaggaatcca-cccccagcccctcTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAATCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCAGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-GGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGAGGATCGGACACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161081 543 + 51301725 --CCCTCTAGACCCCAGTTTCTGAGGATGATGGAGTCCGAGACTCAGCTCCTCTCCTTTGAGAACCTAGGAACCCGGA-CTCCAGCCCCTTCCTCCTT---GGAGACAAGaatcca-cccccagcccctctcctAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAAcccagaccccctctttggatcccccat--cccccagcccttgtgaaaccagatatccggacc-ccccagcccTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-Gggcctccagcct--cacctcct----tcGGCGCTCCAGACCCCTCTCCTACAGAGAACCCGGGGATCGGACACCC i papAnu2.chr19 M 776 C 0 s chlSab2.chr6 46866446 529 + 50890351 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGAGTCCGAGACTCAGCTCCTCTCCTTTGAGAACCTAG---------------GCCCCTTCTTCCTT---GGAGACAGGAATCCA-CCCCCAGCCCCTCTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCGTTTGCGAAGGCAGAAATCAAAGTTACTCGCTGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCTCTTGTGAAACCAGGTATCCGGA-C-CCCCAGCCCTTCT---CCTTCGCGAGCACCCAGAGGAGCCCGGGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGGGGATCGGACACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45448984 532 + 49145316 --CCCTCTGGACCCCAGTTTTTTAGGATTCCggagtccgagtctcag------------gagaacctaggaaccggga-ctccagctccttcctccttggaggagacaggaag--a-caggagactcctctcctttcagagtgcacagggctccAGCCCTCCT--CCTTTGAGAACGCAGGAAAGCGTGGGGCTCTCCCAG--CACCCAGGCCCCACCTTTTCAAATGCAGAAATCAAAGCTACTCCCTGCACCCATGCTGAAGACCCAGATTTGAAGACGCCCCTCCTTAAAAAACCCAGAAGCAGCACCCctcccgg-acccctcctctttgagagcccaggagtctagacgtccaagccccctcttccag---cgaggatccaggagcccagacccccTCTTTGCATCCCCCAT---CCCCGGCCCTTGTGAAACCAGATATTCGTAAC-CCCGAGCCCTTCT---CCTTCGAGAGCACCCAGAGGAGCCC-GGGGCTCCAGCCT-CCAACCTCT----TTGGCGCTCCAGACCCCTCTCCTATTGAGAATTCGGGGATCGGAGCCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3692148 402 + 145441459 --------------------------------------------------------------------------AGTA-TTCCAGTCCCTTCCTCTTTTGAAGACAGTAGAAT----------------CCCCTTT--GAGAACCCAGGCCTCCAGCTCACTCCTCCTTCCAGGACCCAAGAA-------------TTAAG--CCCCCACCCCACCCCTTTGCCAATGTTGAAATCAAAAGTACTTC---TACTTCCATTTATGACCCACA-----------CCTTCC-------GGCCAGAAAAACAATCCTTCACAACACCCCTCTTCTCTGAGAGCCCAGGAATCTGTATCATCCTCACCCTCCT---------GAGTACATTGGAGCCC---------TTCTGGGTCCCCAATTTCCTCTGCGTCTTACAGGACCCAGTACTCCCACT-CCC--GCCCAGCT-----------------CGGAGAAGCCC--AGCATTTAGCATCCTGTTTTCTAAGCTCTGAGCTCTGGGCTCCTCTTTAACCCGTACCTCGGAGAGAAGGCAATG i mm10.chr7 C 0 C 0 s canFam3.chr1 19649937 470 - 122678785 TCCCCCGTAGTTCCCAGTTG-TGAGGGTCCTGGAGTCCTACCCTCAGCTCCTCTCCTCTGAGAACACGGAAATCTGTACCTCTAGAACCTTCCTCCTTCGAGGTTAAAGAAATCTACCCCCCAGCTCCGCTTTTCT--GAGAACCCGGGCCACCAGTCCTCTTCCCCTGTGAGAAC-CAGGAA-------------CCCAGACCTCTCAGGCCCTCTCTCTGCGATCCCAGAAATCAAAGCAACTCCCCCCGCCCCCACTGAGGTCCCAGGGATTGAGATATCGCTCT---GAGAACCCAGCAACAACCCTTGTCCCAG-GCCCTTCC-CTTGGAGAGCGCAGGATTCCAGATCTCCCGGCCTCCTCCTCCTCCTTCGAGGACCCAGCGACTCAACCCTCCC-------TCTCCGAT-----------------AACCCAGGT--------T-------------T-----------------------------CAGCCTCCAGCCT-CCACCTCCT----CCGGAGCTGCAGACCCTTCTCCCACCTGAAGCCCGGAGGACGGTCCACC i canFam3.chr1 C 0 C 0 a score=893877.000000 s hg38.chr19_GL949748v2_alt 164105 324 + 1064304 TCCCCT-CCCCAGGCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAACGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTTGCCGCCGCAGCTCCGGCCACGCCTCCCCCGCCCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCCGGGCTG s panTro4.chr19 59096799 324 + 63644993 TCCCCT-ccccaggcccaggc-ccaggcccagccccaacccGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAACGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTTGCCGCCGCAGCTCCGGCCACGCCTcccccgcccagcgcgc----ccccgcgccgccTGCTCCTTCTGGGCGC----CCGCCGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55974262 318 + 60714840 TCCCCT-------GCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAAAGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTggccgccgcggctccggccacgcctcccccgcccagcgcgc----ccccgcgccgccTGCTCCTTCTGGGCGC----CCGCCGGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102743793 324 - 106955855 TCCCCT-CCCCAGGCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGCTCCAACGCGCCGCCGGGCCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGTAGGCGGCCGAGCAGTCCCAGCCCGCTGGCCGCCGCGGCTCCGGCCACGCCTCCCCCGCCCAGCGCGC----CCCCGCGCCTCCTGCTCCTTCTGGACGC----CCGCCGGGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55059136 330 + 59248254 TTCCCT-------Ccccaggc-ccaggcccagccccaacccgtcccgcgcaccccagcGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCAGCCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCGGGCCGCTGCGGCTCCGGCCACGCCTCCCCCGCGCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCTGGGCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161624 330 + 51301725 TTccct-------ccccaggc-ccaggcccagccccaACCCGTCCCGCGCACCCCAGCGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCAGTCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTcccagcccgcgggccgccgcggctccggccacgcctcccccgcccagcgcgc----ccccgcgccgcctgctccttctgggcgc----ccgctgggccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46866975 330 + 50890351 TTCCCT-------Ccccaggc-ccaggcccagccccaacccgtcccgcgcaccccagcGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCGGGCCGCTGCGGCTCCGGCCACGCCTCCCACGCCCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCTGGGCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45449516 324 + 49145316 TCCTTT-------CCCCAGGC-CCAGGCCCAG------CATGTCCCGCGCACGCCAGCGTGGGTCGGATCCCACTCCCGACAGAGCTACAGGAGGTTGCGCCAGCCCCGAACTCCAGCGCGCC-CCGGAGCCG-C-CCCGCACCCGCCAGTCCGTAGCTACCCCGCCACCGCGTGACCCCCGCCTTGCCATTGGGGGCCGCCACCCCGGCCCACCTGA------------GCCGCCCGCCGGGAAGGAGGCGGCCGAGCAGTCCCAGCCCGCGAGCCGCCGCGGCTCCGGCCACGCCTCCCCCGCCCAGTGCGC----CCCCGCGCCGCCTGCTCCTTCGGGGCGC----CCGCCGAGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3692550 312 + 145441459 -ACCCTGTACGATCTGCAAGCACCTTTCGTAGCCCAGCCCCGCGCAGCGAAGGCCAGCGTGTATCCGATTC-TGCCTCGGCAGATCCACAGGCGGTTACGCCA---CCCAGCCCGGCCACGCTCTGGGCGCTGTC-CCCGC------------------ACCCCGCCACCCTACGATCTTCGTGACGCCGCCATGCAACCCAACCTGGGCCCACCTGA------------ACCGTCCGTGGGCCAGAAGACTGCGGAGC---TCCTTTTCG-AGGCCGCCTCGGCTCGCGCCACGCCTCCCCAGCTCAGCACGC----CCCCGCACTGCCCG-TTCTGGAGGGCGC----CGGCAGGGCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19650407 299 - 122678785 ----------------------------CCAGCGCC--CCAGTTCC-----CCCCGGCGCAAGTCAGA----CCTCCCGGCAGAGCCACAGGCGGTTAcgcca-ccccgcgctccgccgcgctctcggcgcca-cacccgcccgggccggcccgccgg---tccgcaagcgc-----ccccgcctcgcccccgaggcgccccgctccggcccacctgggcccggctccgcgctgcccGCCGGGCAGAAGGCGGCGGAGCAGTCCCGGCCCACCGG-CGCCCCGGATCCGGCCACGCCTCCCTcgcccggcgcgcgcggtcccgggccg------------gtgcgcggcTCCGTCAGGCTG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60033564 287 + 64156825 M a score=1680104.000000 s hg38.chr19_GL949748v2_alt 164429 511 + 1064304 CGCAGATCAGGCCGGGGAAGAAGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGAAGCCGA-GAGCGCGAGTCGGCAACGGGATTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGCTCCGGAAAGGAGGCGGGGTCTGGAGCTCGCCGTGAGGAATGAGGCGGGGTCTCCC-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAgtt-ctccggaagcggggccacaaacttcggctcacttcggcaatagtcga--------------gaacgga---------------gagctgaggccagtgtgggcggagccacatgtttcggctttcttcggaggtagtCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA s panTro4.chr19 59097123 512 + 63644993 CGCAGATCAGGCCGGGGAAGAAGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGAAGCCGA-GAGCGCGAGTCGGCAACGGGATTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGCTCCGGAAAGGAGGCGGGGTTTGGAGCTCGGCGTGAGGAATGAGGCGGGGTCTCCC-TTCGGGTTCCTTCGGGAACAATCGGGAGCTTGAGTTTCCCCGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGCAATAGTCGA--------------GAACGGA---------------GAGCTGAGGCCACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55974580 511 + 60714840 CGCGGATCAGGCCGGCGAAGAGGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGGAGCCAA-GAGCGCGAGTCGGCAACGGGACTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCAGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTCGGACCCGAAGGGGAACAGACGGGATCCGGAAAGGAGGCGGGGTTTGGAGCTCGGCGGGAGGAATGAGGCGGAGTCTCCC-TTCGGGTTCCTTCTGGCACAATCGAGAGCTTGAATT-CACTGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GAGCTGGGGCCAGTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCTAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGACAGTTGGGTACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102744117 511 - 106955855 CGCGGATCAGGCCCGGGAAGAGGTCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCGGAGCAGGCGCCGA-GAGCGCGAATCGGCAACGGGACTTGAGTCCAGGTCC----------ACACTGTGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAGGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGAATGAGGCGGGGTCTCCT-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACTGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------AAGCTGGGGCCAGTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTCGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60033851 511 + 64156825 CGCGGATCAGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGAACGTGAAGGGGCAGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACAGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGCGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGCCGGATGTGGGTGGGGCCATATGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i rheMac3.chr19 M 287 C 0 s macFas5.chr19 55059466 511 + 59248254 CGCGGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACTG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGAACGTGAAGGGGCAGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGCGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGCCGGATGTGGGTGGGGCCATATGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161954 511 + 51301725 cgcgGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCAGAGAACGTGAAGGGGCGGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGATCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGAGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGccggatgtgggtggggccataAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46867305 511 + 50890351 CGCGGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAACCCCAGAACAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGTACGTGAAGGGGCGGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAAACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGTGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCAGAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGAACACAGACT-CGGCCGGATGTGGGTGGGGCCATAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45449840 506 + 49145316 CGCGGATCGGGCCGGGGATGAGGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCGGGAGCGGGCGCCAG-GAGCGCGAGCCAGCAGCGGCACTCGAGTCCAGGTCT----------GCAATGGGCTCCGAGTTCCGAGTACGTGAAGGGGCGGGGCCTCGGGCTCGGAACAAGGAGGAGCCAAAAGCCTTGGGCCCGGGGAGGATAAGACAGGATCCGGAAAAGAGGCGGGGTCTGGAGCCTAGCGTGAGAGATGAGGCGGGGTCTCCG-TTCGGGTTCCTTCGGGCACAGTCGGGAGCTTGAGTT-CACTGGAGGTGGGGCCACAAACTTCCGCTCACTTCGGAGATAGTCGA--------------GAACCGA---------------GTGCTGGGGCCGGCGTGGGCGGGGCCACACGTTTCGGCTTTCTTCGGAGATAGTCGAGTC---AGGGTCGCTGTTCTGATGTGGGCGGGACCAC--ACT-CGGCCGGATGTGGGTGGGGCTACAAGTTTCGGTTTACTTCGTAGATAGTTGGGTATAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3692862 508 + 145441459 CGCGGTCCAGGCCCCGAGAGCCGCGGCTGTACGAGTTACAGCACCGCAAGAAAGGTACCC--------------A-GAACACCAGTCTGCCGCAAGATGCCTGTCGCGATCTTTCTAGGAGGTCCCCGGGCAAAGAGCTGCCAGTACGTGAAGGGGCGGGGTTTCGGG-TCAGA--GAGGCGGGGCCAAGATCTTCGAGTCC----------CGTTGAGACTTG---AGGAGGAGGGACCTGGAGCTCA-----------GAGACAGACTTTCAGCTTCGGATTCCTTCGGGCACACTCGGTCATTCAAGCC-CTCGGCATGGAGTGCCAC-AGCTTCGGCTTACTTCGGGGATAGCCGAATTCCAAAGTCACGGCTCGGAATTAGATGCGTTTACAAACTCGGCCGGATGTAGGCGGGACCACACACTTCGGCTTGATTCGGAAATAATCGGGTCCA-AAAGTCGTTGTGTAGTGTTAGGCGGGCTCAAGAACG-CAGAACGAAGTAGGCGGGACCGCATGCTTCGGCTTACTTCGGAGATAGTCGGAATCAG i mm10.chr7 C 0 I 244 s canFam3.chr1 19650706 293 - 122678785 -------------------------------------CGGGCCAGGCAGGGAAG-CGTCCTGCTCCGCGCGCCCGCGAGCACCCCTCGGCCGCTGCA-------CCTGGACC----------TCAC-GGCAGCCGAGCCCAGAGCACGTAAAGAGGCGAGGCCTCGG---------------------------------------------------------------------------------------AGGAAGGAGGCGGGGCCTCCGCTTCGGGTTCCCTCGGGCAGAATCGGCGGC---AGCT----TGGAGGCGGGGCCACAGGCTTCGGTGTACTTCG---------GA--------------------A---------------------------------------------------------------------------------GTCTCTGTTCGGATGTAGGCGGGGCCAAGAGCTGCGGGCGGACGTAGGCGGGGTCATA-GCGTCGGTTTTTTCCGGAGATGGTTGGGTACCA i canFam3.chr1 C 0 C 0 a score=608434.000000 s hg38.chr19_GL949748v2_alt 164940 200 + 1064304 GTGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCCATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTACGGGACCGGGCCAGGGTGACGATCCTCAAGTTCCCAAGTAGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG s panTro4.chr19 59097635 200 + 63644993 GTGTCGC----TAGGGTGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCTGCGTGAGCCTACGGGACCGGGCCAGGGTGAAGATCCTCAAGTTCCCAAGTAGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55975091 200 + 60714840 GTGACGC----TAGGATGATAGACGGAGTCAACAGGATCGCCAGATACCGATGAGTATTTACA------------AGGGGGCGGGGCGG--AAGCGACTTGCCCTCAAAGGGGGGGAACCCCGAGGGCCGGCGTGTGCCTACGGGATCGGGCCAGGGTGACGATCCTCAAGTTCCCAAGTTGAAGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102744628 200 - 106955855 GCGACGC----TGGGGTGATAGGCGGAGTCAACAGGTTCGCCAGAGACCGATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGTCTACGGGACCCGGCCAGGGTGAGGATCCTTAGGTTCCCAAGTTGAGGAGAGGAAGCGGCAGAGAGAGGTGCGCTTAGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60034362 200 + 64156825 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCGAGATGCTGATAAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGCACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55059977 200 + 59248254 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCGAGATGCTGATAAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGCACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47162465 200 + 51301725 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGGACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46867816 200 + 50890351 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGGACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45450346 189 + 49145316 GTGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGGCAGATACGGAAGAATATTTACA------------AAGTGGAGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGGAGATCGGCGTGCGCGTAGGGGGCGGGGTCAGGGAGACGATCCTCAAATTCCGGAGT-----------AGCGGCAGAGGGAGGTGCGCTCGATGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19650999 206 - 122678785 GTGGCTCAGATTAGGA-GATAGGCGGAGTCTGTTTTTTCCTGAG-----GAGGCGGGGCCACAGACAGGGCTCGGAGGGGGCGGGGCCAACAGGAGCCCAGCCC---GAGGGGCGG-CCCCCGTTGACC--CGTCAGCCGCGGGGGCGGGGCCAGGGTAATTAGCCTCCCACACGCGAGAGGCAGAACCGTAGAGGCGGAGGGAGGTTCGCTTCGCGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3693370 244 + 145441459 I a score=1685709.000000 s hg38.chr19_GL949748v2_alt 165140 496 + 1064304 -GGCGGAGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGCAAGGAGCGCGTG--GCGCGGTGCGCAGTGGGTGGCTCCACCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGGAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGTCCAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TAGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGGCCGCGAGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTATTGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC s panTro4.chr19 59097835 496 + 63644993 -GGCGGAGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGCAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCACCTCGACTGCGAATTACTGTT---TATGAGGTGACTTGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGGAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TAGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGAAGGGGGCGGGGCCACAGGCTGCGAGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTATGGCGTCCGGGAGGAGGCGGGGCTGCGGATTCGGCCGAGCCGAGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55975291 497 + 60714840 -GGCGGGGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCAGCATGAGG------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTGTATCGGTGGACAGTGGGACTTTCTGTATGGAGGCAAGGAGGCGGACTGACCGCTCTCAATTGGGGTGAGCCCGCCCGATCTGATAGTGGACCGCGGGTGCCTAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TCGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGGCTGCGAGACTGCTGGTGAGCCGATGACGCCCGAACGCCGAACCTATTGCGTCCGGGAGGAGGCGGGGCTACGGACTCGGCCGAGCCGAGAAC i ponAbe2.chr19 C 0 M 678 s nomLeu3.chr10 102744828 492 - 106955855 -GGCGGGGCCAAGG---TGGCCCCCGCG-----------GGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGTCGCTGATGGGGCTGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGGAAGGAGCGCGTG--GTGCGGTGCATAGTGGGTGGCTCCGCCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGAAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCGGGGCGGAGAGTGGACGGCGGGTGCCCAGGGGGTGGGGCTTTC-GCTGTGGGGTTCAGTCG-TCGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCAGAGGGGGCGGGGCAACAGGCTGCGAGACTGCTGG-GAGCCGATGACGCCCGAACGCCGAACCTAGTGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60034562 496 + 64156825 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTCGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGCGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060177 496 + 59248254 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTCGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGCGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47162665 496 + 51301725 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCCGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTAGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCAGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868016 496 + 50890351 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GGGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TTCCCCCGGCGCTGACGGGGCGGGGTGACGAAGTTGACG-C-GAGGGTCGGCCAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTGTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAAGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCGTCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCTGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45450535 505 + 49145316 -GGGGGTGCCAAGG---TGGCCACCGCGG--------GAAGAAGGCGGGGCTCCAGGCCTGTGAGGGGAGGGTCCTGAC-TTCCCGCGGCGCCGAGGCGGCGGAATGACGAAATTGACG-CTGGGGGTCGACATGGGGAGGGGAGGGTGGAGGAAGCAGAGCGTGGCGCGCGGTGCGTAGTGGGTGGCTCCGCCTTGACTGCGAGTTGGTGGTA--TCTGAGGTGACTCGGTGATTCTATCCGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAAGCGGACTGAGCGCTCCTAAGTGGGGTGAGCCTGCCCGAGCGGAGAGTGGATGGCGGGTGGCCAGGGGGCGGGGCTTTCGGCTACGGGGTTCGGTCG-TGGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCTCTTGGAGTGGGAGGGGCCACAGGCTGCGGGACTGCCAG-AAGCCGATGACG-CAGAACGCCGAACCTTGTGCGTCCGGGAGTGGGCGGGGCTACGTAGTCGGCCGAGCCGAGAAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3693614 384 + 145441459 -GGCGAGGCCAGAGCAATGACCCTCAAGGTCCCATTTGTGCAGACCGGAGT-----GGCAGTGAGGGCT--TTCTTGGCTTTTCCGCTTTGCTGACCTGACGGGATGACG--------G-A-----------------------GG---------------------ACGCGCTACGTAG-GGCCAGCTCCGCCTTAGCCGAGAGTTGGTGTTGGCTAGGGGTTGACTTATTGCCTCTGCCTGAGGACAGTACGACAGATTGAAAGGGAGCCACGACGCACACTGCAC----------------------CTCGAGTG------------------------------------CGACTGT-GGATTCAATCG-T-AATTGTGAACTCCTTAAATTGGGTAGG----------AAGTGGGCGGGGCCACAG-CTGGAAGAACGATGG-GATCTGGCTAGGGTCGAATGCTGAACCTTTTGCAACTTAGAGGGGGTGG-----CTGATTCTACTGAGCCGAGATC i mm10.chr7 I 244 I 32 s canFam3.chr1 19651205 467 - 122678785 GGGCGGGGCCAGGT---TGTTCCCCTTCG--------CGGGAAGGCGGGGCTACGGTGCCGCTGGGGCGGATCCCAGAC-TTCCCGCTCGGCTGAGGTGGCGGCGTGACGAGATTGACGCA-GGGGGTCGGGATGGGGAG----GGGTGGAGGAAGCTGCGCGTG--GCGCGCTACGTAGGGGGCGGCTCCGCCGGGGCTGCGAGCGGGTGTT---TACGAGGCGACTAACTCGTTCTATCGGAGGACGGTACCGCATTCTGAGGGGAA------------------CGCTCACGAG-GAGGTGAGCCCGCCCGGGCAGCGAACGGACGGCGGGTGCCCCGGGGGAGGGACCTCCGGCTGC-GGGTTCGCTCACTAGGGCGGGGACTCTCCCGCCGGGA-GCGCCTGCGGCCGGAGCGGGCGGGGC--CCGGCTGCTGGTC-GACGG-GAGCCGAGGGAGCCCGAACGCCG--------GCCTTCGGGAGGGGGCGGGGCTGCGAGTTCGGCCGACCCGGGA-- i canFam3.chr1 C 0 C 0 a score=509117.000000 s hg38.chr19_GL949748v2_alt 165636 210 + 1064304 ACCCGAACGTCAAATTGCTGGCGTTCGGGAAGGGGGCGGGGCTGCGGATTCGGTGGAGCCGAGGACGCCCGAACGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGGAGGTCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGAGCGAAGGCTCGAGCGTCCGGAAGAGGGTGTGGCC s panTro4.chr19 59098331 210 + 63644993 ACCCGAACGTCAAATTGCTGGCGTTCGAAAAGGGGGCGGGGCTGCGGATTCGGTGGAGCCGAGGACGCCCGAATGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGGAGGTCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGAGCGAAGGCCCGAGCGTCCGGAAGAGGGTGTGGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745320 210 - 106955855 TCCCGAATGTCAAATTGCTCACGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCGAGGACGCCCGAACGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGTAGGCCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGACCGAAGGCCCGAGCGTCCCGAAGAGGGTGTGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035058 210 + 64156825 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCAATTCTTGTGCTCTGAAGGGGGCAGGGTTTTGTACTGTTGGAGTCTGAGCGCTTGTAGACCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060673 210 + 59248254 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCAATTCTTGTGCTCTGAAGGGGGCAGGGTTTTGTACTGTTGGAGTCTGAGCGCTTGTAGACCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163161 209 + 51301725 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGATCGCCGCACTTCTTGTTCGA-GAAGGGGGCAGGGTTTTGTGCTGTGGGAGTCTGAGAGCTTGTAGGCCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868512 210 + 50890351 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGAGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCACTTCTTGTGCTCGGAAGGGGGCAGGGTTTTGTACTGTGGGGGTCTGAGAGCTTGTAGGCCGGAAAGCAGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451040 210 + 49145316 ACCCGAACGCCAAATGGCTCACGTTCGAGAAGGGGGCGGGGCGGTGTATTCGGTGGAGTCGAGGACTCCCGAACGCCGAACCTCCCGCTCCAAGGAGGGAGCAGGGTTTCGTACTGTGGGAGTCTGAGAGCGAGTAGGCCCGACAGCCGAATCACAGTGGTTCGGAAACAGGAGGAGCTAAGGCCGGAGCGTCCCGAAGAGGGTGTGGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3694030 200 + 145441459 TTCCGAAGGCTGAAACGCTTGCGTTCGGGTAG---GCAGGACTCCCGATTGAGCCGAATTTAGGATGCTGGAACATCGAACAGCTGGCGC--AAGACAGGACTGGGTTT----CTTTTAAAGTCCGACTCAGAATAGGCGGGAAAGGCGAATCTGGGCACTTC-GAAAGGGGAGGGGCTGGGCTCCAAGTATTTAGAAGAGGGTGTGGCT i mm10.chr7 I 32 C 0 s canFam3.chr1 19651672 115 - 122678785 --------------------------------GGGGCGGGGCT------------------------------------------TGTGCT---------GTGGGGTCCCACCCCGCGAGAG------------GAGGGCCTGAGGCCGCGCCTCGTCGGTTCGGAAAGGGGAGGGGCCGAGTTCCGAGGCGCTGGAAGGGGGCGTGGCC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=262305.000000 s hg38.chr19_GL949748v2_alt 165846 113 + 1064304 TCGGCGG--TGCCTTAGCCTCCAGAGCTTCTGACCGCTGACGGGAACACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG s panTro4.chr19 59098541 113 + 63644993 TCGGCGG--TGCCTTAGCCTCCAGAGCTTCTGACCGCTGACGGGAACACCCGAAGGGTGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGTCCTTTGTAAGGGGGCGTGTCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745530 113 - 106955855 TCGGCGG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGACGGGAACACCCGAAGGGGGACGCCCACTTTGC-AAGAGAGTGGTGCCAAAATGCACCTTTGTAAGGGGGCGTGTCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035268 113 + 64156825 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGAGGGGGGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060883 113 + 59248254 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGAGGGGGGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163370 113 + 51301725 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGATGGAAGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868722 113 + 50890351 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGATGGAAGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACTTTTGTAAGGGGGCGTGTCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451250 99 + 49145316 TCGGCGG--TGCTTTAGCTTCGAGAGCTTTTGATCCCCGACGGGA--------------ACGCCCACTTTGC-AAGAGGGTGGAGCCAAAATGGACCTTTATAAGGGGGTGATTCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3694230 100 + 145441459 TGAGCAAACCACCCTACATT---GAGGTTCTGAGATTTGACGGACGCATAAGAAG----ACACCCACTTTGCAAAAAGGGCGGTGC--------ACCACTATGGCGGGAGGTCTC- i mm10.chr7 C 0 C 0 e canFam3.chr1 19651787 0 - 122678785 C e ponAbe2.chr19 55975788 678 + 60714840 M a score=279580.000000 s hg38.chr19_GL949748v2_alt 165959 140 + 1064304 CCGCGCTTGCGGAGGTTTGTTTTTCACGCTCCAAGGCGCAATGGTAGG-TACGGCAGTGCGGGCACAGAGCGGGTGCCGACCGCAGGGTCACAAGGGTAGAGCGGGACCCTGGGGGCTTGGCGAGGGGCGAGGGTCGGGGG s panTro4.chr19 59098654 140 + 63644993 CCGCGCTTGCGGAGGTTTGTTTTTCACACTCCAAGGCGCAATGGTAGG-TACGGCAGTGCGGGCACAGAGCGGGTGCCGACCGCAGGGTCACAAGGGTAGAGCGAGGTCCCGGGGGCTTGGCGAGGGGCGAGGGTCGGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745643 139 - 106955855 CCGCGCTTGCGGAGGTTTGTTTTTCAGACTCCAAGGCGCAATGGTAGG--ACGGCAGTGTGGGCACAGAGCGGGTGCCGACCGCAGGGACACAAGGGTAGAGCGGGGCCCCGGGGACTTGGCAAGGGGCGAGGGCCGGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035381 133 + 64156825 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGGGCCCCGGGGACGCGGCGAGGGGCGAGGG------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060996 133 + 59248254 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGGGCCccgggggcgcggcgaggggcgaggg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163483 131 + 51301725 CCGCGCTTGGGgaggtttgtttttgagactccAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAgggccccgggggcgcggcgaggggcgag--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868835 140 + 50890351 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGAGCCCCGGGGGCGCGGCGAGGGGCGAGGGCCGCGGG i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45451349 106 + 49145316 CCGCGCTTGT---GGTTTCTTTTTGAGACTTGAAGGCGCAATAGCAGG-TAGGGCAGTGTGGGCACAGAGCGGGTGCCGACGGCAGGGTCACAAGGGCTGAGCGGGGCTC------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3694330 97 + 145441459 ---------------------TCTGAGGGGACGAGAGATGGTGGTACGCTTTGGCAGAGAAGATGGTCACCTGGAGCTGA---------------GGGGGAGCGGAACGGTGGGACCTGGGTGAGGGGCGTGG-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19651787 86 - 122678785 CCGCGCTAGGGGA------------------------GCAGAGGACCG-----------------------GGACGCGGACTGCAGGGTCCGGAGGGCCGAGCTGGGCCCCAACGTCTCGGCGAGAGGCGGGG-------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=-13340.000000 s hg38.chr19_GL949748v2_alt 166099 17 + 1064304 CTTGTCTCCGG-CGTCTC s panTro4.chr19 59098794 3 + 63644993 TTT--------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745782 3 - 106955855 CTC--------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035514 10 + 64156825 ----CTGCCGGTCG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061129 10 + 59248254 ----ccgccggtcg---- i macFas5.chr19 C 0 C 0 s calJac3.chr22 45451455 1 + 49145316 ------------C----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19651873 4 - 122678785 ----CCTC---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3694427 0 + 145441459 C e ponAbe2.chr19 55975788 678 + 60714840 M e chlSab2.chr6 46868975 3 + 50890351 I e papAnu2.chr19 47163614 0 + 51301725 C a score=201140.000000 s hg38.chr19_GL949748v2_alt 166116 84 + 1064304 GTCTCCGGCGGCCGCGAGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- s panTro4.chr19 59098797 84 + 63644993 GTCTCCGGCGGCCGCGAGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745785 84 - 106955855 GTCTCCGGCGGCCGCGCGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGATTTGCGACTGA- i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60035524 84 + 64156825 GTCTCCGGCGGCCGCGGGGCCTGGCGGGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061139 84 + 59248254 gtctccggcggccgcggggcctggcggGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163614 75 + 51301725 ---------ggccgcggggcctggcgggatc---gccctggggtggggcctggcgcT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868978 84 + 50890351 GTCTCCAGCGGCCGCGGGGCCTGGCGGGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45451456 84 + 49145316 GTCTCCGGCGGCCGCGGAGCCTGGTGGGATC---GTCCGGGGGCGGGGCCTGGCACT-------TGGGCCC---------------------------------AGCAGGTGGTGAACAGCGGCCGA- i calJac3.chr22 C 0 C 0 s mm10.chr7 3694427 59 + 145441459 -TCTTAACTGGTC------CCTGGGTAGATCTTGGCTGGGGGGCGGGG---GGGG--------------------------------------------------GCAGGTGGCAACCC--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19651877 123 - 122678785 GTCTC-GGCGGCACCGGGGCCTGGTGGCATC---GCCCGAgggcggggtccggggcccagggggcgggcccggcggcagggggcggggccTGGTGTGGAAAATTGGCAGGTGGCGAAC-GCGGCCCCG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=38572.000000 s hg38.chr19_GL949748v2_alt 166200 13 + 1064304 GCGAGGCCCCGCC s panTro4.chr19 59098881 13 + 63644993 GCGAGGCCCCGCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60035608 13 + 64156825 GCGAGGCCCCGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061223 13 + 59248254 GCGAGGCCCCGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163689 13 + 51301725 GCGAGGCCCCGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869062 13 + 50890351 GCGAGGCCCCGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451540 13 + 49145316 GCGAGGCCCCGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3694486 10 + 145441459 ---CAGCCCCGCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19652000 13 - 122678785 GCGAGGCTCCACC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M e nomLeu3.chr10 102745869 100 - 106955855 M a score=29580.000000 s hg38.chr19_GL949748v2_alt 166213 13 + 1064304 CCCTGAGGCCTAG s panTro4.chr19 59098894 13 + 63644993 CCCTGAGGCCTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55976469 13 + 60714840 CCCTAAGGCCTAG i ponAbe2.chr19 M 678 C 0 s rheMac3.chr19 60035621 13 + 64156825 CCCTGAGGACTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061236 13 + 59248254 CCCTGAGGACTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163702 13 + 51301725 CCCTGAGACCTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869075 13 + 50890351 CCCTGAGAATTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451553 13 + 49145316 CTTTGTGGCCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3694496 13 + 145441459 CCTTGGGGGGTGA i mm10.chr7 C 0 I 1 s canFam3.chr1 19652013 12 - 122678785 -CCCCAGGCTCAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102745869 100 - 106955855 M a score=1517394.000000 s hg38.chr19_GL949748v2_alt 166226 369 + 1064304 GGGCGGGGCTT--CGCCGAGACCCCGG-AGGCTTTGGGTGCGCT-GCAGCGGT----------------CTGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- s panTro4.chr19 59098907 369 + 63644993 GGGCGGGGCTT--CGCCGAGACCCCGG-AGGCTTTGGGTGCTCT-GCAGCGGT----------------CCGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55976482 353 + 60714840 GGGCGGGGCTT--CGCCGAGACCCCGG------------------GCGGCGGT----------------CCGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCT-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGACTTGAACTC--------------------------------------- i ponAbe2.chr19 C 0 I 194 s nomLeu3.chr10 102745973 369 - 106955855 GGGCGGGGCTT--TGCCGAGACCCCGG-AGGCTTTGGGTGCGCT-GCGGCGGT----------------CCCCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i nomLeu3.chr10 M 100 I 194 s rheMac3.chr19 60035634 369 + 64156825 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGGGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACGT--------------------------------------- i rheMac3.chr19 C 0 I 194 s macFas5.chr19 55061249 369 + 59248254 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACGT--------------------------------------- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47163715 369 + 51301725 GGGCGGGTCTT--CGCCAAGACCCCGG-GGGCTTTGCTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCggggctcgaactc--------------------------------------- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46869088 369 + 50890351 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCTGCGCGCA-GCCGTTTCGGTAACTCCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i chlSab2.chr6 C 0 I 194 s calJac3.chr22 45451566 366 + 49145316 GGGCGGGGTTT--TGCC-AGATCCC-G-AGGCGCCGAGTGCTCTCCCGGGGGC----------------CCGCG--GCGCA-GCTGTTTCGGTGACCGCTTTGTCTCCC-GGCTCCCGCAGGAGGATGCTGGTTGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGGGCCGAGGCGGTTCAGGCCCTCCGGGAGCGCCTGGGAGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCACGCTTGGGCCTCCCGCTGCTGTTGATGCCCGAAGAGGCGCGGCTCCTGGCAGAGATCGGTGCTGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i calJac3.chr22 C 0 I 2 s mm10.chr7 3694510 373 + 145441459 GGGCGGGGTCTTGCGCTGAGGGCGTGGAAGACTTCAGTCGGG---TCGGTGG----------------------------G-GCTGTTTGGGTGACCGCGACGCACCCC-CACT-CCGCAGGAAGATGCTGGTGGTGGAGGTCGCAAATGGCCGCTCGCTGGTGTGGGGAGCCGAGGCCGTGCAGGCGCTGCGGGAGCGTCTGGGAGTCGGGGGACGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTTCCGCTTCTGCTGCTGCCTGAAGAAGCCCGGCTCCTGGCCGAGATAGGCGCGGTGACCCTAGTCAGCGCCCCGCGCCCGGACCCCCGCAACCATGGCTTGGTAAGAAACGAA----------------------------------AGGC-------CCTGA----------TAGTGGGAAGGCCTGGGA------------------------------------------ i mm10.chr7 I 1 C 0 s canFam3.chr1 19652025 496 - 122678785 GGGCGGGGCGT--CGCTGAGGcacccc-accccccacccccacc-ccacccccacccccacccccacctccGCGGTGGGAGCACTCTGTCGGTGACCGCTGTGCCTCCCTGGCCCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTATGGGGGGCCGAGGCGGTGCAGGCACTGCGGGAGCGTCTGGGAGTAGGGGGCCGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTTCTGGCCGAAATCGGCGCGGTGACCCTGGTCAGCGCCCCGCGCCCGGATCCGCGCCAACACAGCCTGGTAAGGGGCGGACGGGGTGGGGGCGGTGCAAACGCTCAGCACGTGGAGGCAGGACAGCCAGACTGCGGGTCTCTGCGGGAGGGGTCTGGGCGCCTTGGATTCTGGAGACTGGGATCCCCAGGTTCAGGCTTT i canFam3.chr1 C 0 C 0 a score=266952.000000 s hg38.chr19_GL949748v2_alt 166595 77 + 1064304 GGGTTCGGTGGGAG--C---GGGACCTGGGAGTCAAGTTTCCTGGCTTCTGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA s panTro4.chr19 59099278 77 + 63644993 GGGTTCGGTGGGAG--C---GGGACCTGGGAGTCAAGTTTCCTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55977029 77 + 60714840 GGGGTCGGTGGGAG--C---GGGGCCTGGGAGTCAGGATTCTTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGTGAA i ponAbe2.chr19 I 194 C 0 s nomLeu3.chr10 102746536 77 - 106955855 GGGTTCGGTGGAAG--C---GGGGCCTGGGAGTCAGGATTCTTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA i nomLeu3.chr10 I 194 C 0 s rheMac3.chr19 60036197 77 + 64156825 GGGTTCGGTGGGAG--C---CGGGCCTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAA i rheMac3.chr19 I 194 C 0 s macFas5.chr19 55061620 77 + 59248254 GGGTTCGGTGGGAG--C---GGGACTTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAA i macFas5.chr19 I 2 I 192 s papAnu2.chr19 47164086 77 + 51301725 gggttcggTGGGAG--C---GGGACTTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46869651 77 + 50890351 GGGTTCGGTGGGAG--C---CGGACCTGGGAGTCAGGATTCCTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAC i chlSab2.chr6 I 194 C 0 s calJac3.chr22 45451934 77 + 49145316 GGATCTGGTGGGAG--C---GGGGCCTGAGAGTCCGGATTACTGGCTTCCGAAGCGACCATAAGCT-----TGGA------GGTTCCAGCGAA i calJac3.chr22 I 2 C 0 s mm10.chr7 3694883 81 + 145441459 GGGCCTGTTGGAAGGTT---GTAAACTG---GTCAGAATTCCTGTCTTCCTAAGGGACTGCAGGATGTGTCTTGG------GGTTCCAGTTAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19652521 85 - 122678785 GGGTTAGGGAGGAG--TCAGGGAGCCAGGGAGCCAAGGTTCCTGGCTTCCTAAGGCAGGGCAGACT-----TGGATCCTGGGATTCCCGCCG- i canFam3.chr1 C 0 C 0 a score=3160539.000000 s hg38.chr19_GL949748v2_alt 166672 753 + 1064304 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCAA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCTGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCACGAGCTGCGCTACAGTATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTCTTT---------Tttttttttttgtctt s panTro4.chr19 59099355 755 + 63644993 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCTGGCCGCCCTGCCCACGAGCTGCGCTACAGTATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTtttcttttc-------tttttttttttgtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55977106 752 + 60714840 GTGTGCTTCTCAGGCTCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCTGGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGTCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAGTCCAGTGACTGGGTCTCCCTGAGGA-TGAGAAAACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGGCCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCACGAGTTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTATGCCTTTCTATATGATCCCAATGTATTCTGTGtttttttt----------ttcttttttttgtctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102746613 744 - 106955855 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCA----------------------GCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGATTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCTGGCCGCCCTGCCCACGAGCTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGAGCCTCTGGTCGCTGTGCCTTTTCATACGATCCCAATGTATTCTGCGTTTTTCTTTTCTAtcttttttttttttttgtctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60036274 758 + 64156825 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTGGA----GCCATGAGGCTGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAGCCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGATCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGtttttttttctttc----tttttttttttgtctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061889 759 + 59248254 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCATGAGGCTGGCTCCAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAGCCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTTTTTCTttct---tttttttttttgtctt i macFas5.chr19 I 192 C 0 s papAnu2.chr19 47164163 756 + 51301725 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCacgggaaggagag-gagagatcTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTActccccacc--------aggtccctcctcttCCCAAGCAGAGCCTTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGATTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTctgcgttttttttttct------tttttttttttctctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869728 761 + 50890351 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCATGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCCGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCAGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTTTTTTTTCTTTC-Ttttttttttggtctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45452011 749 + 49145316 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAACAAGAGCAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGGCAGGAGCTCCTAGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAACAGGCTTCAGGGGCCAGCGCGA----GCCAGGAGGCCGGCAGGAGCCAGGCTGCCAAAGTGAACGAGACCAG---TGATCTCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CGTGGGAGGTGGAGTCCAGGGACCATGGGAAGAAAAG-GAGAGATCTTTTGGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCTTGAGGG-TGCGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACT-TCAACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGAGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCAAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGGGGCTTCTTCCTCAGCGCGGCTGGGAAGTTTGGAGGTGACTTCCTGGTCTATCCGGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTATGCTAGTCTTTACAATCTCAATGTATTCTGCGGttttc------------ttacctttcttctctt i calJac3.chr22 C 0 C 0 s mm10.chr7 3694964 741 + 145441459 GTTTACTTCTCAGGCCCTAGCATCGTTCAAACGCCAGCAAGAGCAGAGTTTCCAGGATCAGAACACTTTGGCAGCCGAGGCCCGGGAGACCCGGCGTCAGGAGCTTCTAGAGAAGATCGTAGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAACAGGATTCAGGGGC-AGATGAAGGAGGCCAAGAAGCCGGTGGAAGTGAGGCTACCCAAGGGAGTGAGACCAGTGATGATGGCCAGCCTTCTGCGGAGCAGGAGGGAGCAGGTGAGATTTTAGGATTTAGAGTTAA--AATTTGGGGCAGGAGGG-AGGGAAACTTTGGAGAATTTTAG---------------TTGGATTTTTCTGGCGC-TAAGGAGACCTTG-----TGGACTCAGTAAATTCTTTT---TGCTCCCAGCCCCATCCCTAGATTCTTCATCTCCCCAACCAGGACCTTCAAATGGGGTGACTCCCTTGCCCAGATCAGCCCTGCTTATCCAGCTGGCCACTGCCAGGCCTCGGCCTGTAAAAGCTAAGCCTCTGGACTGGCGTGTGCAGTCCAAAGACTGGCCCCATGCTGGCCGTCCTGCCCACGAGCTGCGCTACAGCATCTACCGAGACCTGTGGGAGAGAGGTTTCTTCCTCAGCGCAGCAGGGAAGTTTGGTGGTGACTTCCTGGTCTATCCTGGTGAGTTTGG---GGGGACTCTGGTGGCTGTACCTTTTCTAATGGTCTTTATTTGTTGTGCATTTTCTTTT---------TTTTGTCCCATTTCTT i mm10.chr7 C 0 I 4761 s canFam3.chr1 19652606 691 - 122678785 CTTTACTTCTCAGGCTCTGGCATCCTTCAAACGCCAGCAAGAGCAGGGCTTCCAGGAGCAAAGCGCCCTGGCAGCGGAGGCCCGTGAGACTCGTCGTCAGGAACTCCTAGAGAAGATTGCAGAGGGCCAGGCTGCGAAGAAACAGAAGCTGGAGCAGGAATCGGTGGCCAGCGAGA----GCCAGGAGGCCAGTGCGAACCCGGCTGCCGCAGAGAGTGAGGCCGG---TGCGAGCCAGGCTCCTGGAGAGCCGGAGGAAGCAGGTGAG--GGTGGGA-GTGGAGTCCACGGACCAGGAGCAGGGGAGAGGGAGATCTTTTGGGAATCCTGGCTGGGAATCTAGGGCCTGGGGCTCATTGGGGGATGGGAAGACCTG--TCCTTGGATGCATCAGACTCTTGCATTCACCTCCCGC---------AGGTTCCTCCTCTCCTCAGCCAGGGCCGTCAAATGGAGTGGCCCCTTTGCCCAGGTCGGCTCTGCTGGTCCAGCTGGCCACTGCTAGGCCTCGACCTATCAAGGCTAGGCCCCTGGATTGGCGTGTCCAGTCCAAAGACTGGCCGCATGCTGGCCGTCCTGCCCATGAGCTTCGCTATAGCATCTACAGAGACCTGTGGGAACGAGGCTTCTTCCTCAGTGCAGCTGGCAAGTTCGGGGGTGACTTCCTGGTCTATCCTGGTGAGTTTTG-TTGGGACCTCTCCTTGT-------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=775530.000000 s hg38.chr19_GL949748v2_alt 167425 259 + 1064304 aatagaggtggggtctc--ttgttgcttaggctggtccctattcctgggctcaagcaatccttccacctcggccccccaaagtgctggaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCTGAACTCATTGGGCAAGCAGTTTAACGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT s panTro4.chr19 59100110 261 + 63644993 aatagaggtggggtctctattgttgcttaggctggtcccgattcctgggctcaagcaatccttccacctcggccccccaaagtgctggaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAACGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55977858 261 + 60714840 aatagaggtggggtctctattgttccttaggctggtcccaattcctgggctcaagcaatccttccacctcagccccccaaagtactgaaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCATTTTCTCTTAGTCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAATGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747357 258 - 106955855 aatagaggtggggtctctattgttgctcaggctggtcccaattcctgcgcttaagcagtccttccacctcggcctcccaaagtgctggaattacaggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTTTTAGCCTCTGAAATTCAT----AGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAGCGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCATTTAGAAATAAGTTAGACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037032 265 + 64156825 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacttcggcctcccaaagtgctgggattacaggcCCAGCGGCA--TTTTTTTTTTTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGATGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTATGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55062648 263 + 59248254 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacttcggcctcccaaagtgctgggattacaggcccagctgca----ttttttttttttttgtCTCACTTTCTCTTAGCCTCTGAAATTCATAGATGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTATGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47164919 267 + 51301725 aatggagatggggtctctgttgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacctcggcctcccaaagtgctgggattacaggcccagctgcattttttttttttttttttgtctcacttTCTCTTAGCCTCTGAAATTCATAGACGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCaacttttattaaatgtttactgtGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870489 264 + 50890351 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacctcggcctcccgaagtgctgggattacaggcCCAGCTGCA---TTTTTTTTTTTTTTTGTCTCACTTTGTCTTAGCCTCTGAAATTCATAGACGGACAGGAAACATTTTGGAGCTCCTGAAATAATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTGTGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45452760 257 + 49145316 aacagagatggggtctgtgttgttgctcaggctggtcccaattcctgggctcaagcaatcttcgcacctcagcctcccaaagtgctgggattacaggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTGTTAGCTTCTTACATTCACAGATGGACAAGAAACATTTGAGAGCTCCCCAACTCACTGGGCAAGCAGTTTAGCGACTCTTATTAAATGCTTACTGTGATCCAGAAGATTAACTCAGAAGC-----AGACAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19653297 183 - 122678785 ------GAAAGAGACCTCCTTTTTCCTCAAAGCCCTCCCCTTTTTT-------CGCAAGCCTGCCACC---------------------------------------------TTTTTGTCTTT------------TCTCAGCCTCTGAAACCCATGGAAGGACAAG-AAcacttgggaac---------catttgaagggcagtatagtaaatc----taagcactttctttgatccagaagtttcactcagagac-tcttagatat i canFam3.chr1 C 0 I 3128 e mm10.chr7 3695705 4761 + 145441459 I a score=339242.000000 s hg38.chr19_GL949748v2_alt 167684 112 + 1064304 CAggctgggcgcaatggctcacgcctgtaatcccaacactttgggaggccaagacaggtggatcacctgaggtcaggagtttgataccagtctggccaacatggtgaaaccc s panTro4.chr19 59100371 109 + 63644993 ---gctgtgcgcaatggctcacgcctgtaatcccaacactttgggaggccaagacaggtggatcacctgaggtcaggagtttgataccagtctggccaacatggtgaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978119 112 + 60714840 CAggctgggcgcagtggctcatgcctgtaatcccagcactttgaaaggccaagacaggtggatcacctgaggtcaggagtttgagaccagtctggccaacatggtgaaaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747615 112 - 106955855 CAggctgggcgcaatggctcacacctgtaatcccaacactttgggaggccaagacaggtggatcatctgaggtcaggagtttgagaccagtctggccaacatggtgaaaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037297 112 + 64156825 CAggctgggcgccatggctcacgcctgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55062911 112 + 59248254 CAggctgggcgccatggctcacgcctgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165186 112 + 51301725 caggctgggcgccatggctcacgcccgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870753 112 + 50890351 CAggctgggcgccatggctcacacccgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453017 111 + 49145316 CAggccg-gtgcgatggctcacgcctgtaatctcagcactttgggagactgaggcgggcagatcacctgaggtcaggagttcaagaccagcctggccaacgtgaagaaaccc i calJac3.chr22 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I a score=394773.000000 s hg38.chr19_GL949748v2_alt 167796 167 + 1064304 catctctactaaaaatactaaaactaactgggcgtggt-ggtgggtgcctgtatttccagctactcgggaggctgaagcaggagaatcatgtgaacccagggggcagaggttgtagtgagccaagatcgtgccattgcactccagcctgggggacaagagcgagactt s panTro4.chr19 59100480 167 + 63644993 catctctactaaaaatactaaaactaactgggtgtggt-ggtgggtgcctgtatttctagctactcgggaggctgaagcaggagaatcacgtgaacccacggggcagaggttgtagtgagccgagatcgtgccagtgcactccagcctgggggacaagagcgagactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978231 167 + 60714840 cgtctctactaaaaatactaaaactaactaggcatggt-ggtgggcgcctgtatttccagctactcgggaggctgaggcaagagaatcacatgaacccagggggcagaggttgtagtgagccgagatcgtgccattgcactccagcctgggggacaagagcaagactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747727 167 - 106955855 cgtctctactaaaaatactaaaactaactgggcgtggt-ggtgggtgcctgtatttccagctactcgggaggctgaggcaggagaatcacttgaacccagggggcagaggttgtagtaaaccaagattgtgccattgcactccagcctgggggacaagaatgagactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037409 168 + 64156825 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcaggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatggtgccattgtactccagcctggcgaacaagagcgagactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063023 168 + 59248254 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcaggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatggtgccactgcactccagcctggggaacaagagcgagactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165298 168 + 51301725 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcgggagcctgaggcaggagaatcacttgaacccggggggcagaggttgcagtgagctgagatcgtgccattgcactccagcctggggaacaagagcgagactt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870865 168 + 50890351 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcacctgtatttccagctactcgggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatcatgccattgtactccagcctggggaacaagagcgagactt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I e calJac3.chr22 45453128 0 + 49145316 C a score=13970.000000 s hg38.chr19_GL949748v2_alt 167963 15 + 1064304 tgtctc----aaaaaaaaa s panTro4.chr19 59100647 19 + 63644993 tgtctcaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978398 11 + 60714840 tgtctc--------aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747894 13 - 106955855 cgtctc------aaaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037577 12 + 64156825 cgtctc-------aaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063191 13 + 59248254 cgtctc------aaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165466 11 + 51301725 cgtctc--------aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871033 16 + 50890351 cgtctc---aaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453128 8 + 49145316 tgtctt-----------ta i calJac3.chr22 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I a score=234839.000000 s hg38.chr19_GL949748v2_alt 167978 78 + 1064304 aaaaaaaaaaaGCCTAGAAGTGGAATAGTTGTGTCCAAG-AGCATCTGTTTTAGAGTATCTATAGTGATGGCTGAAATG s panTro4.chr19 59100666 78 + 63644993 aaaaaaaaaaaGCCTAGAAGTGGAATAGTTGTGTCCAAG-AGCATCTGTTTTAGAGTATCTATAGTGATGGCTGAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978409 78 + 60714840 aaaaaaaaaaaGCCTAGAAGTGGAATAGCTGTGTCCGAG-AGCATCTGTTTTAGAGTATCCATAGTGATGGCTGAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747907 78 - 106955855 aaaaaaaaaaaGCCTAGAATTGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATGGCTGAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037589 77 + 64156825 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063204 77 + 59248254 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCTAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165477 77 + 51301725 aaaaaaaaaaagtctag-agcGGAATAGTTGGGTCCAAG-AGGATCTGTTTTAGAGCATCCATAGTGATCGCTGAAATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871049 77 + 50890351 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453136 78 + 49145316 aaagaaaaaaaatCTAGAAGTGTAGTAGTTG-GTCCAAGCATTATCTGGTTTAGACCATCCAGAGGAGTTGCTGAAATG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19656608 78 - 122678785 aagtaaaaaatgccaaaaagtggaactgctaggtacaag-aagagctatttggaaatattcatagtgattactaaaatg i canFam3.chr1 I 3128 C 0 e mm10.chr7 3695705 4761 + 145441459 I a score=2580084.000000 s hg38.chr19_GL949748v2_alt 168056 661 + 1064304 ATCTCAGATCTCCTCCCAGTGGTCGTTCCCGTGGCGTCCAGCCGTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCTTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTA-GGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCCGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCTTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttggtatataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------gtggatggtctcatctgcatgtacaggtgagaaaaaggcctggagggg s panTro4.chr19 59100744 661 + 63644993 ATCTCAAATCTCCTCCCAGTGGTCGTTCCCGTGGCGTCTAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTA-GGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTA------GGAGTCTAGAACATCCTCCTACCTTTCTCCGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCTTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttgttacataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------gtggatggtctcatctgcatgtacaggtgagaaaaaggcctggaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978487 660 + 60714840 ATCTCAAATCTCCTCCCAGTGGTCATTCCCGTGGCGTCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTTCGCTTCCACGCTCATTACATCGCTCAGTGCTGGGCCCCCGAGGACCCTATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTAGGGGGATGTGGC--TGTCTGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTTCTACCTTTCTCCATGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCATTTTTATGT--------------TCTTCCTTGTTTCAAAGCACATattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttgttatataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------ctggatggtctcatctgcatgtacagatgagaaaaaggcctggaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747985 650 - 106955855 ATCTCAAAT---CTCCCAGTGGTCGTTCCTGTGGTGTCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTACATCGCTCAGTGCTGGGCCCCCGAGGACCCCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAGCTCCAGAGACCTAGGGGGATGTGGCTGTGTCTGCAGCAAGAGCCTTTCTGGAGGTT--CCCCAGCTTTTCTCTG------GGAGCCTAGAACATC---CTACCTTTCTCCGTGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACGTCCTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTATTGGCTGTG---T--TTTTGTAGTTCCCTGTTTTCACACCGTGAGCTTCCCGAGAATG------G----GGTTTGATTCA--TCT--GTTTTCTACAGGGTTTAAATCTCAGGAGGTCTCAAtaaacttgttatataaat-----gttcatgatttgaatgtttacgacagtcctggtacct------gtggatggtctcatctgcatgtacagatgagaaaaaggcctggaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037666 661 + 64156825 ATCTCAAATCTCCTCCCAGTGGTCATTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGCGCTTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATTGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTTCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTAcatcctttttatgt--------------tcttccttgtttgaaagcacttattggctgtg---t--ttttgtagttacctgttttcacactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgataaacctggaaccg------gtggatagtctcatctgcatatacagatgagaaaaaggcctggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063281 661 + 59248254 ATCTCAAATCTCCTCCCAGTGGTCATTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGCGCTTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTGAAAGCACTTATTGGCTGtg---t--ttttgtagttacctgttttcacactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcagaagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgacaaacctggaaccg------gtggatagtctcatctgcatatacagatgagaaaaaggcctggaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165554 661 + 51301725 ATCTCAAATCTCCTCCCAGTGGTCGTTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAgtgcttctctccctcccccaggtgACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCGGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTGAAAGCACTTATTGGCTGTG---T--TTTTGTAGTTACCTGTTTTCACACTGTGAGCTTCCTGAGAATGGGGCCTG----GGTTTGATTCA--TCT--GTTTTCTACAGGGtttaagtctcaggagatctcaATAAACTTGTTATATAAAT-----GTTCATGATTTGAATGTTTATGACAAACCTGGAACCG------GTGGATAGTCTCATCTGcatatacagatgagaaaaaggcctggaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871126 660 + 50890351 ATCTCAAATCTCCTCCCAGTGGTCGTTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGC-TCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCCGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCTTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTtattggctgtg---t--ttttgtagttacctgttttcccactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgacaaacctggaaccg------gtggatagtctcatctgcatatatagatgagaaaaaggcctggaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453214 662 + 49145316 CTCTCGCATCTCCCACCAGCAGTCACTCCTGTGGCTTCTA-CCCCCTGCCATTGGCCACTGCTTCAGTGCCTCTGTCC--CCACCAGGTGACCCACTCCGCTTCCACGCCCACTACATCGCTCAGTGCTGGGCCCCCGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGCTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAGTGGGCCAGCCTGCAGTGAACTCCAGAGACCTAGGCGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCAAGCTTTT-TCTG------GGAGTCTAGAACATCCTCCCACCTTTCTCTGCGCTTAGTTTTTGATTCCAGGTTTTCCAACGCTAAGTCCTTTTTATGT--------------TCTTCCTTGTCTCAAAGCACTTCCTGGCTGTG---TTGTTTTGCAGTTACCTGTTTTCACactgtgagcttcctgagaatgggaactg----ggtttgattcatctct--gttttctacaggggttaagtctcaggaggtctcaataaacttgttatctgaat-----gTTCATGAGttgaattcttatgacaatcctggaacct------gctggcggtcttatctgcatgtacagatgagaaaaaggcctggaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3700466 621 + 145441459 ATGTCAGATCTCATCCCAG-----------------------CCCCTGCGGAGGGGAACTGCT---ATGCATCTTTCTTTCCCCCAGGTGATCCACTGCGTTTCCATGCTCACTACATTGCTCAGTGCTGGTCTGCTGAGGACCCCATCCCACTTCAGGACCTGGTCTCTGCAGGCCGCCTGGGAACCAGTGTCAGGAAGACCCTGCTGCTCTGCTCCCCTCAGCCTGATGGGAAGGTGGTCTACACATCCCTGCAGTGGGCCAGCCTGCAGTGAGCT------------GGAGAC-------TGTGTGTGGCAAGAACCCTCTTCAATGGTCACCCCAGCTCATCTCTGCAC---GGAGGCTTG--CGCTCTCCTGC---TCTGCCTGGTTTG-TTCCGATTCCAGGGTTTTGAACACTACATCCTTTCTGTTTGTTTTTTGGTTTTGTTTTTCCTGTTTTAAGGCGATTACTACCTGTG---TTGTTCTTTATTT---TGTTTCCAAATTGT--GCTTGTTGAGCATGGAGACTGCTTTTGTTTGGCTTT--TGT--GTTTCTTGCGGGGCTTAGGTTCCTGCAGTTCT-AATAAATTTGTTGAATAAAT-----GTTTGTATTttgagtccttacaacaatccttgaaatg------tggggc--tctcattcctgtattcagatgagaaaa-------gggaat i mm10.chr7 I 4761 C 0 s canFam3.chr1 19656686 677 - 122678785 -ATTCCTGTCTCCTACCTGTAGACATTCCAGTGTCTTCTAGCCTTCTACCACTGGGAACTGCTACA---TGTCTCTCTTTTACCCAGGTGACCCACTTCGTTTCCACGCCCACTACATTGCTCAGTGCTGGGCTCCTGGGGACCCCATTCCACTCCAGGACCTGGTTTCTGCTGGCCGCCTGGGGACCAGCGTCAGAAAGACGCTGCTGCTCTGTTCCCCTCAGCCTGATGGTAAAGTGGTCTACACCTCCCTGCAGTGGGCCAGCCTACAGTGAACTCCAGAGACCCGTGGGGATGTGGCTGCATCTGTGGAAAGAGCCTTTCTAGATGGT--CCCAAGCTCATCTCTGCAAATGGGAGGCTGTTA-ACCCTCCTACCTCTTTCTGCGGTTAGATTTTGACTCCGGATTTATAAACACTACATCCTTCTTATTT--------------CCCTCCCTGTTTCAAAGCACTTATTGGCtgtgatat--ttttgtagttacctatttccaagctgtgagcttcttgagggtgaagactg----ggtttgattca--tctccagtttctacagggcttagggc-caagaggtctcagtaaacttgttgaataaacgCGGAGTCTGTGTTTTGAATTCTGATGGCAATGGGGGGAGGGGGCAGTGTGGGTTTTTGCATTTGCTTATACAGAGGAGGGAA-TGCCTGGAGGAG i canFam3.chr1 C 0 I 1091 a score=386208.000000 s hg38.chr19_GL949748v2_alt 168717 121 + 1064304 ggggactgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctacctcactaaactt-cctctTGAAAAGAT s panTro4.chr19 59101405 121 + 63644993 ggggactgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctacctcactaaactt-ccttttgAAAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979147 122 + 60714840 ggggaatgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctaccgcactaaacttcccttttgAAAAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748635 120 - 106955855 ggggaatgatttgcccaaagtcacacgcttagtaaatagcaggcttggcctttcaaaattgg-ttttctgactcctaaatctgcactctttctaccgcactaaactt-ccttttgAAAAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038327 121 + 64156825 ggggaatgacttgcccaaagtcacacagttagtaaatagcaggcctggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-ccttttgAAAAGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063942 121 + 59248254 ggggaatgacttgcctaaagtcacacagttagtaaatagcaggcttggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-cctttTGAAAAGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166215 121 + 51301725 ggggaatgacttgcccaaagtcacacagttagtaaatAGCAGGCCTGGCCTTTCAAAATTGGTTTTCCTCACTCCTAAATCTGCACTTTTTCTACCGCACTAAACTT-CCTTTTGAAAAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871786 121 + 50890351 ggggaatgacttgcccaaagtcacatagttagtaaatagcaggcctggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-cctttTGAAAAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453876 118 + 49145316 ggg--atgacttgcc-aaggtcacacagctagtcaacagcaggcctggcctttaaaaatgtttttttctgactcctaaatctgcactctttctaccacactaaactt-ccttttgAAAAGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3701087 110 + 145441459 gggaaatgacttgaccagggtcacaaaact----------gggcctgggccattatacctggtctttgtgattcaggaatctgc-ctcttttcattgcactaAGGGT-TGCCTTGAAGATAT i mm10.chr7 C 0 I 2697 e canFam3.chr1 19657363 1091 - 122678785 I a score=518199.000000 s hg38.chr19_GL949748v2_alt 168838 210 + 1064304 TTCTATGAAATTTCCCAGATGCATACAAACGTtataaataaaaatat---------aggctgggcacgatgacccacacctgtaatcccacagaacttttggaggccaaggcagggggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataatttaaaaaaaaattagccag----------ggatcccttgag s panTro4.chr19 59101526 210 + 63644993 TTCTATGAAATTTCCCAGATGCATACAAACGTTATAAATAAAAATAT---------Aggctgggcacgatgacccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataattaaaaaaaaaattagccag----------ggatcccttgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979269 210 + 60714840 TTCTATGAAATTTTCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggccgggcacgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataatttaaaaaaaaattagccag----------ggatcccttgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748755 218 - 106955855 CTCTATGAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATATAGGCCTGGCAggccgggcgtggtggctcacgcctgtaatcc--cagcactttgggaggccgaggtgggcggatca--tgaggtcaggagatcaagac--atcctggctaacatggtgaaaccctgtctctactaaaaat------acaaaaaattagccgggcgtggtggcgggtgcctgtag i nomLeu3.chr10 C 0 I 9 s rheMac3.chr19 60038448 204 + 64156825 TTCTACAAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtctaggagtttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-taaaaaaattag--------------GGATCCCTTGAG i rheMac3.chr19 C 0 I 58 s macFas5.chr19 55064063 204 + 59248254 TTCTACAAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtccaggagcttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-taaaaaaattag--------------ggatcccatgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166336 204 + 51301725 TTCTACAAAATTTCCCAGATGCATACAAaggttataaataaaaatat---------aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtccaggagtttgagaccagctctgGC-AACACTGTAataccca-tctctacaaaaaataattt-taaaaaaattag--------------ggatcccttgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871907 204 + 50890351 TTCTATAAAATTTCCCAGATGCATACAAAGGTtataaataaaaatat---------aggccgggcatgatggcccacacctgtaatcccacagaacttttagaggccgaggcaggaggatcgcttgagtccaggagtttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-aaaaaaaattag--------------ggatcccttgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453994 188 + 49145316 TTCTATGAAACTTCTCAGATGCATGC-------ATAAATAAAAATAT---------Aggctgggcgtgatggctcacacctgtaatcccacagcactttgggaggccatcgcaggaggattgcttg--------------agaccagctctggt-gacgctgtaataccccatctctacaaaaaaataatt-taaaaaaattagccag----------ggatcccttaag i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=38892.000000 s hg38.chr19_GL949748v2_alt 169048 16 + 1064304 cctgggaagttgaggc s panTro4.chr19 59101736 16 + 63644993 cctgggaagttgaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979479 16 + 60714840 cctggaaagttgaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748982 16 - 106955855 ctcgggaggctgaggc i nomLeu3.chr10 I 9 I 485 s macFas5.chr19 55064267 16 + 59248254 cctgggaagttgaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166540 16 + 51301725 cctgggaagttgaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872111 16 + 50890351 cctgggaagttgaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454182 16 + 49145316 cctgggaagttgaggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e rheMac3.chr19 60038652 58 + 64156825 I a score=70805.000000 s hg38.chr19_GL949748v2_alt 169064 27 + 1064304 tgctgtgagctgtgattgcaccactgc s panTro4.chr19 59101752 27 + 63644993 tgctgtgagctgtgattgcaccactgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979495 27 + 60714840 tgctgtgagctgtgattgcaccactgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749483 27 - 106955855 tgctgtgagctgtgattgcaccactgc i nomLeu3.chr10 I 485 C 0 s macFas5.chr19 55064283 27 + 59248254 tgctgtgagctgtgattgcaccactgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166556 27 + 51301725 tgctgtgagctgtgattgcaccactgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872127 27 + 50890351 tgctgtgagctgtgattgcaccactgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454198 27 + 49145316 tgctgtgagctgtgatcgcaccactgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e rheMac3.chr19 60038652 58 + 64156825 I a score=130611.000000 s hg38.chr19_GL949748v2_alt 169091 68 + 1064304 cctccagcctgggagacagagcaag--aacctgtctcaaaaa------atatatatatgtgtgtgtgtatatatgt s panTro4.chr19 59101779 68 + 63644993 cctccagcctgggagacagagcaag--aacctgtctcaaaaa------atatatatatgtgtgtgtgtatatatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979522 66 + 60714840 actccagcctgggagacagagcaag--aacctgtctcaaaaa--------atatatacgtgtgtgtgtatatatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749510 70 - 106955855 actccagcctgggagacagaacaag--accgtgtctcaaaaaa----tatatatatatgtgtgtgtgtatatatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038710 51 + 64156825 TATCCAGCCTGGGAGACAGAGCAAG-------------------------ACATGTATGTGTGTGTGTATATATAT i rheMac3.chr19 I 58 I 32 s macFas5.chr19 55064310 50 + 59248254 actccagcctgggagacagagcaag-------------------------acAtgtatgtgtgtgtgtatatatg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166583 69 + 51301725 actccagcctgggagacagagcaag--atcctgtctcaaaaa-----tctacatgtatatatatgtgtgtatatat i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46872154 69 + 50890351 actccagcctgggagacagcgcaag--atcctgtctcaaaaa-----tctatatgtatatatacgtgtgtatatat i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45454225 76 + 49145316 actccaacataggagacagagcaagagaccttgtctcaaaaaaaaagtgtgtgtctgtgtgtgtgtgaatatatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=11518.000000 s hg38.chr19_GL949748v2_alt 169159 8 + 1064304 aaatatac s panTro4.chr19 59101847 8 + 63644993 aaatatac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979588 8 + 60714840 aaatatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749580 8 - 106955855 aaatacac i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47166654 8 + 51301725 aaatacac i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46872225 8 + 50890351 aaatatac i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45454301 8 + 49145316 acatatgt i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e macFas5.chr19 55064360 0 + 59248254 C e rheMac3.chr19 60038761 32 + 64156825 I a score=17468.000000 s hg38.chr19_GL949748v2_alt 169167 26 + 1064304 acacatgtatgtatatatatgtgtgt s panTro4.chr19 59101855 26 + 63644993 acacatgtatgtatatatatgtgtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979596 26 + 60714840 acacgtatgtgtatatatatatgtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749588 11 - 106955855 atacacgtgtg--------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038793 20 + 64156825 ------AAatctatatgtatatatat i rheMac3.chr19 I 32 C 0 s macFas5.chr19 55064360 1 + 59248254 -------------------------t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166662 26 + 51301725 acacgtacgtgtgtgtatagatatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872233 26 + 50890351 acacacacgtatgtgtgtgtgtatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454309 26 + 49145316 atatgtgtgtgtgtatatatgtatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=1007313.000000 s hg38.chr19_GL949748v2_alt 169193 331 + 1064304 gtatatatatatatattatGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCCTGGGGAG--AA----AGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTGG-----------AGAATT-TTTTTGATACTGTATATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATTTGTAAAAAATTTGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGCAGTTTTATTTTGTCA s panTro4.chr19 59101881 335 + 63644993 gtgtatatgtatatatTATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCCTGGGGAG--AACGTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATGCTGTATATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATATGTAAAAAATTTGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGAAGTTTTATTTTGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979622 329 + 60714840 g----tatatatatatCATAAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AACGTCAGGAAGTACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTGTACATTTATATTTTAGACTC---TTTTGGA--TGTGTTATATTCTGCAGTTTTTATAAAAGCTAAAACACATGTATATGTAAAAAACTTGCACTTACAAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTATGTTTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGCAGTTTTATTTTGTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749599 328 - 106955855 -----tgtatatatatCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AATCTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCACGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTGTACATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAA--ACATGTATATGTATAAAATATGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTGGAACACTACCATTA-----TTTCAATAATTACACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038813 336 + 64156825 gtgtgtgtatatatatCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCGTGGGGAG--AGTGTCAGGAATGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTATACATTTATATTTTAGACTCTTTTTTTGGA--TTTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATATGTATAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064361 336 + 59248254 gtgtgtgtATATATATCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCGTGGGGAG--AGTGTCAGGAATGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTATACATTTATATTTTAGACTCTTTTTTTGGA--TTTGTTATATTCTGCAACTTTTATAAAAGCTAAAACACATGTATATGTATAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166688 336 + 51301725 gtgtgtgtatatatatcatgaAAGGAA-----ATGAG--TATTGTAATTTCAGGA-----GTTCAGAGCATGGGGAG--AGTGTCAGGAAGGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAatt-tttttgatactatacatttatattttagattctttttttgga--tttGTTATATTCTGCAATTTTTATAAAAGCTaaaacacatgtatatgtataaaatatgcaCTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872259 336 + 50890351 gtgtgtgtgtgtATATCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AGTGTCAGGAAAGACTCTGGAA-----ggcattctgc--------tttttcatggcctgggtagtggttg-----------agaatt-tttttgatactatacatttatattttagactctttttttgga--tttgttatattctgcaattTTTATAAAAGCTAAAACACATGTATATGTGTAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454335 331 + 49145316 gtacatacatatgAAAGAAAAAAGGAG-----ATGAGAATATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--GATGTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTAGTTG-----------AGAATT-TTTTTGCTGCTGTACATTGATATTTTAGACTC-GTTTTTTTA--TGTGTTATATTCTGCAACTTTTACAAAAGCTAAA--ACATGTATGTGTATAAAATACGCACTTTTGAAATCGTTTACCCACGGTTTTGCTTAGAACTCGGTACTGGAACACTGCCACAA-----ATCTAGT------ACCTTTATCCTACCAGTGTGCAGTTTTATTTTGTCA i calJac3.chr22 C 0 I 17 s canFam3.chr1 19658454 358 - 122678785 GCATAAATAAAAGTAACATGAAGAAAAGGCACATGAG--TGTTGCAGTTTCAGGACAGAGGTTCAG---GTggggaggtaatgtcaggagggacacttggggctgtggaatgctgctggtggtttttttcttggcctgggtggtgtttattcaggtgtgtagcattattttttataccatacgtttatgattcagatcatttttttatatgtgtgttctgttccacCCTTTCTTAAAAAGTGGAAACACATCCA----AAGAAAATACACATTTGTGAGAT---------GCCTTTCTGCTTGAAA--TATTGCTTGAACGTTATCAGTACTGACTTTCAATATTTACGTATATACTTTAAAAATGCATAG------TTTGTTA i canFam3.chr1 I 1091 C 0 e mm10.chr7 3701197 2697 + 145441459 I a score=67452.000000 s hg38.chr19_GL949748v2_alt 169524 26 + 1064304 CGTTTATTTTGTCAGTGTAATACATT s panTro4.chr19 59102216 26 + 63644993 CGTTTATTTTGTCAGTGTAATACATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979951 26 + 60714840 CGTTTATTTTGTCAGTGTAATACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749927 26 - 106955855 CATTTATTTTGTCGGTGTAATACATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039149 26 + 64156825 CGTTTATTTTGTCAGTGTAATACATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064697 26 + 59248254 CGTTTATTTTGTCAGTGTAATACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167024 21 + 51301725 CG-----TTTGTCAGTGTAATACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872595 26 + 50890351 CGTTTATTTTGTCAGTGTAATACATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19658812 26 - 122678785 CATAGATTTTGTTACTGAAATACAGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e calJac3.chr22 45454666 17 + 49145316 I a score=666814.000000 s hg38.chr19_GL949748v2_alt 169550 311 + 1064304 CACATGGTGAGTctgggcgtggtggcttatgcttgtaatcccagcactttgggagaccaaggcgggcggatcatgaggtcaggagttccagagcatcctggccaacatgg------cccgcctctatgaaaaatacaaaaatt-agccgggcgtggtggcgggcgcctgtaatcctagctactccggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcacgccactgcactccagtctgggcgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTC s panTro4.chr19 59102242 311 + 63644993 CACATCATGAggctgggcgtggtggcttatgcttgtaatcccagcactttgggagaccaaggcgggcggatcatgaggtcaggagttccagagcatcctggccaacatgg------cccacctctatgaaaaatacaaaaatt-agccgggcgtggtggcgggcgcctgtaatcctagctactccggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcacgccactgcactccagtctgggcgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979977 311 + 60714840 CACATGGTGAggctgggcgtggtggcttatgcttgtaatctcagcactttgggagacgaaggcgggcggatcacgagatcaggagttcgagaccatcctggccaacatgg------cccacctctacgaaaaatacaaaaatt-agctgggcgtggtggcaggcgcctgtaatccctgctactcgggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcgcgccactgcactccagtctgggtgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749953 317 - 106955855 CACACGGTGAggccgggcatggtggctcatgcttgtaatcccagcactttgggaggccaaggcgggcggatcacaaggtcaggagttcgagaccatcctggccaacatggtgaaaccctgcctctacgaaaactacaaaaatt-agctgggcatggtggcgggcgcctgtaatcccagctactcgggtggctgaggcaggagactcacttgaatctgggaggcggaggttgcagtgagccaaggtcgcgccactgcactccagtctgggcaacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039175 314 + 64156825 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggagttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaattgagccaggc-tggtggcgggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaataaaacaaaaacaaacaaaaaagaCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064723 315 + 59248254 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgagatcaggagttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaattgagccgggcgtggtggcgggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaataaaacaaaaacaaacaaaaaagaCATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167045 313 + 51301725 CACATGGTGAGGCCGGGCGCA-Gggctta------caatcccagcactttgggaggccgaggcgggcagatcacggaGGTCGGAgttcgacaccatcctggccaacatggtgaaaccccgcctctactaaaaatgcaaaaatt-agccgggcgtggtggcgggtgcctgtaatcctagctactcggcaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgctactgcactccagtctgggcgacagagctagactctgtctcaaaaaaacaaaaacaaacaaaaaagacatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872621 310 + 50890351 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggatttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaatt-agccgggcgtggtggcgggtgcctgtaatcctagctacttgggaggctgaagcaggagaattgcttgaactcaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaaaaaaacaa----aaacaaaaaagaCATT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658838 0 - 122678785 C e calJac3.chr22 45454666 17 + 49145316 I a score=23180.000000 s hg38.chr19_GL949748v2_alt 169861 7 + 1064304 CACATGG s panTro4.chr19 59102553 7 + 63644993 CACATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980288 7 + 60714840 CACATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750270 7 - 106955855 CATATGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039489 7 + 64156825 CACATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065038 7 + 59248254 CACATGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167358 7 + 51301725 caCATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872931 7 + 50890351 CACATGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19658838 7 - 122678785 CACATGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e calJac3.chr22 45454666 17 + 49145316 I a score=185482.000000 s hg38.chr19_GL949748v2_alt 169868 59 + 1064304 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCCATTTCTTCCCCCCATGTTT s panTro4.chr19 59102560 59 + 63644993 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCCATTTCTTCCCCCCATGTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980295 59 + 60714840 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCAATTTCTTCCCCCCACGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750277 59 - 106955855 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCAATTTCTTCCCCCCATGTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039496 59 + 64156825 TAA-AGTTCTGGGGCTGAAAGTCTCCACTGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065045 59 + 59248254 TAA-AGTTCTGGGGCTGAAAGTCTCCACCGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167365 59 + 51301725 TAA-AGTTCTGGGGCTGAAAGTCTCCACTGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i papAnu2.chr19 C 0 M 1926 s chlSab2.chr6 46872938 59 + 50890351 TAA-AGTTCTGGGGCTGAAAGTCTCCACCGCTAGTTGTTCAATTTCTTCCCCCCATGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454683 58 + 49145316 TAG-AATTCTGGGGCTGAAAGTCTTTATTTCTAGTTCTT-AATTTCTTTTCCCTACATAt i calJac3.chr22 I 17 I 30 s canFam3.chr1 19658845 47 - 122678785 TAATGATTCTGGAGCTGAAAGTGTCTATCTCTAGTTTCCCAATGTCT------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I a score=335456.000000 s hg38.chr19_GL949748v2_alt 169927 141 + 1064304 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctggaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT s panTro4.chr19 59102619 141 + 63644993 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctggaaccggaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTTCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980354 139 + 60714840 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctc--gaaccggaataggtttagagagactccCG---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750336 141 - 106955855 CATTCTTTCTCTTTTTTGcgtgaattgagcagcctctggaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039555 140 + 64156825 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTTCCCTCTTTCTTGCCATTCCCAGTAAACAGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065104 140 + 59248254 CATTCTTTCTCTCTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTTCCCTCTTTCTTGCCATTCCCAGTAAACAGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46872997 140 + 50890351 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACCGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454771 136 + 49145316 TTCTCTCTCTCTCTCTTCTgtgaattgagcggcctctggaatcagaataggttttgagagacttcCA---TCTCCCCACTTTCTTGACATTACCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTAAAGGT-----TTAATTT i calJac3.chr22 I 30 C 0 s canFam3.chr1 19658892 87 - 122678785 ----------------------------------------------------------GGGCTGCCAATTTCTTCTTTCTTTTCTATACTTCTCAGTAAACAAATTTGCTAGAACCTCATATTTCCTGTAAGCTTAGATTAATTT i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=228705.000000 s hg38.chr19_GL949748v2_alt 170068 99 + 1064304 AAAATATGACACTGggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaat s panTro4.chr19 59102760 99 + 63644993 AAAATACGACACTGggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980493 99 + 60714840 AATATACGACATTGggctaggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750477 112 - 106955855 AAAATACGACACTGggccgggcatggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtcaggagtttgatatcagcctggccaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039695 112 + 64156825 AAAATATGATACTGggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065244 112 + 59248254 AAAATATGATACTGggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873137 112 + 50890351 AAATTGTGATACTGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454907 112 + 49145316 AAAATACGACACTGggctgggtgtggtggctcccgcctgtaatcctagcactttgggagtctgaggtgggtggatcacctaaggtcaggagtttgacactagcctggccaat i calJac3.chr22 C 0 I 1042 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e papAnu2.chr19 47167424 1926 + 51301725 M a score=445780.000000 s hg38.chr19_GL949748v2_alt 170167 210 + 1064304 atggtgaaaccccatctctactaaaaatacaaaaaaaaaaattagccgggcgtggtggcatgcgcctgtactcctagctactcaggagcctaaggcaggagaatcacttgaatccaggaggcagaggttgcagtgagccaagatcgcactactacactccagcctgggcaacaagagctaaact-ccatctc-aaaaaaataaaaagaaaag s panTro4.chr19 59102859 209 + 63644993 atggtgaaaccccatctctactaaaaatac-aaaaaaaaaattagccgggcgtggtggcatgcacctgtactcctagctactcaggagcctaaggcaggagaatcacttgaatccaggaggcagaggttgcagtgagccaagatcgcactactacactccagcctgggcaacaagagctaaact-ccatctc-aaaaaaataaaaagaagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980592 209 + 60714840 atggtgaaaccccctctctactaaaaata--gaaaaaaaaattagccaggcgtggtggcacgcgcctgtactcctagctactcaggagcctaaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccaagattgcaccactacactccagcctgggcaacaagagctaaactcccatctc-aaaaaaataaaaagaaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750589 207 - 106955855 atggtgaaaccccatctctactaaaaata--caaaaaaaaattagccgggtgtggtagcacgtgcctgtactcctagctactcaggaggctaaggcaggagaatcacttgaacccaggaggcagaggttgtactgagccaagatcacactactacactccagcctgggcaacaagagct-aact-ccgtctc-aaaaaaataaaaagaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039807 209 + 64156825 atggtaaaatcccatctctactaaaaata--caaaaaaaaattagctgggcgtggtggtgcacacctgtactcctagctactcaggagcctaaggcaggagaatcgcctgaacccaggaggcagaggttgcagtgagcccagatcgtgccactgtactccagcctgggcaacaagagctaaact-ccatctcaaaaaaaaaaaaaagacaag i rheMac3.chr19 C 0 I 23 s macFas5.chr19 55065356 207 + 59248254 atggtaaaatcccatgtctactaaaaata--caaaaaaaaattagctgggcgtggtggtgcacacctgtactcctagctactcaggagcctaaggcaggagaatcacctgaacccaggaggcagaggttgcagtgagccaagatcgtgccactgtactccagcctgggcaacaagagctaaact-ccatctc--aaaaaaaaaaaagacaag i macFas5.chr19 C 0 I 14 s chlSab2.chr6 46873249 205 + 50890351 atggtaaaatcccatctctactaaaaata--caaaaaaaaattagctgggcatggtggtgcacacctgtactcctagctactcaggagcctaaggccggagaatcacctgaacccaggaggcagaggttgcagtgagccaagattgtgccactgtactccagcctgggcaacaagagctaaact-ccatctc---aaaaaaaaaaagacaa- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456061 205 + 49145316 atggtgaaaccccgtctctactaaaaata--c---aaaaaattagctgggcattgtggcgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgtggtgagccgagattgcgccattgcactccagcctgggtaacaggagcgaaact-ccgtctc-aaaaaaaaaaaaggaaaag i calJac3.chr22 I 1042 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e papAnu2.chr19 47167424 1926 + 51301725 M a score=704.000000 s hg38.chr19_GL949748v2_alt 170377 2 + 1064304 aa s panTro4.chr19 59103068 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980801 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750796 1 - 106955855 -a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55065577 2 + 59248254 AG i macFas5.chr19 I 14 C 0 s chlSab2.chr6 46873454 1 + 50890351 -g i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e calJac3.chr22 45456266 0 + 49145316 C e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040016 23 + 64156825 I a score=1426.000000 s hg38.chr19_GL949748v2_alt 170379 14 + 1064304 aaaaaa-TGACGCTA s panTro4.chr19 59103070 14 + 63644993 aaaaaa-TGACGCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980803 14 + 60714840 aaaaaa-TGACGCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750797 14 - 106955855 aaaaaa-TGGCACTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55065579 7 + 59248254 AAAAAAG-------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873455 6 + 50890351 aCAGTA--------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456266 6 + 49145316 ---------aCACTA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19658979 14 - 122678785 AAAACA-GGACACTA i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040016 23 + 64156825 I a score=398898.000000 s hg38.chr19_GL949748v2_alt 170393 152 + 1064304 ACCCCTGTCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAATTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAGTACTTAGAAGTCTC-------ATTCCCTCTGTCATGAGTCTCTCCTCTGAAAAGTTCCTCATTTAAAACT s panTro4.chr19 59103084 155 + 63644993 ACCCCTGTCTGGCCAATACTCTCTTCTTTGTGCCTGCTTCATAATTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCATGAGTCTCTCCTCTGAAAAGTTCCTCATTTAAAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980817 155 + 60714840 ACCCCTGTCTGGCCAATACTCTCTTCTTTATGCCTGCTTCATAAGTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAATACTTAGAAGTCTC-------ATTATCTCTGTCATGAGTCTCCCCTCTGAAAAGTTCCTCATTTAAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750811 155 - 106955855 ACCCCTGTCTGGCCAATACTCTCTTCTTTGTGCCTCCTTCATAAGTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAATAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCATGAGTCTCCCCTCTGAAAAGTTCCTCATTTAAAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040039 152 + 64156825 ACCCCTGCCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTGTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCAGGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACC i rheMac3.chr19 I 23 C 0 s macFas5.chr19 55065586 152 + 59248254 ACCCCTGCCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTGTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCAGGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873461 155 + 50890351 ACCCCTGCCTGGACAATACTCTCTTCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTATCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCACGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456272 151 + 49145316 ACCTCTGTCTGGCCAAGACTA--ATCTTTGTGCCTGTTTGATAAGCGGC-TTGTAAGTCTATGCTCTACCCTTTCTCCTCTCTACAAC-AAGTAATTAGATGTCTC-------AGTACCTCTGTCATGAGCCTCTCCTCTGAAAAGTTTCTCATTCAAAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19658993 159 - 122678785 ATCCCTGCCTCATTAACACTCTGTTCTTTGTGCCTCTTTGATAACTGGC-TTGCAAATCTATTCTCCAGGCTCTCTCTTCTCTACAACAAAGTACTTAGTTGACTCAGTACTGAGTACCTCTGTCTTGAGTCTTCCCTC--AAAAATTCCTCATTAAAAACT i canFam3.chr1 C 0 I 64854 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=820469.000000 s hg38.chr19_GL949748v2_alt 170545 383 + 1064304 CCTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagccgctgagctcaggagtttgagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaacaaacaaacaaaAAAAAACTTTTGTGACTGGTGTccccccatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagttaggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttgatattgatagcttcctaactcatcccctgccttccattcttgcccctctgttgtctgttttcaacagagcagccagaat s panTro4.chr19 59103239 379 + 63644993 CTTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagccgctgagctcaggagttcgagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaacaaacaaac----aaaCACTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctgtaggtgccgtgttcaaagcactgtggatcca-cagtttcgcccc-accctccaccttcactgccagtatcttacaaaaaccaaaccatggctcgtttgatattgatagctttctaactcatcccctgccttccattcttgcccctctattgtctgttttcaacagagcagccagaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980972 382 + 60714840 CTTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagcagttgagctcaggagttcgagaccagccttggctgaacatagtgagacttcatctcatctctatttaaaaacaaaaaaac--aaAAAAACTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttgatcttgatagcttcctaactgatcccctgccttctattcttgcccctctattgtctgttttcaacagagcagccagaat i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102750966 381 - 106955855 CTTGTggccagatgtggtggctcagacctataatcctagcactttgggaggccaaggtgggaagatcagttgagcaggtgagctcaggagttagagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaaaaaaaaaaa--aaaAAAAAGTTTGTGACTGGTGaccccacatattgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttggtcttgatagcttcctaactcatcccctgccttctattcttgcccctctattgtttgttttcaacagagcagccagaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040191 366 + 64156825 CTTGTggctgggtgtggtggctcagacctataatcctagcagtttgggaggccaaggtgggaagatcagt--------tgagctcaggagtttgagaccagcctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaaCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactaccagcatcttagaaaaaccgaaccatggctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtctgttttcaacagagcagccagaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065738 366 + 59248254 CTTGTggctgggtgtggtggctcagacctataatcctagcagtttgggaggccaaggtgggaagatcagt--------tgagctcaggagtttgagaccagcctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaaCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactaccagcatcttagaaaaaccgaaccatggctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtctgttttcaacagagcagccagaat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873616 367 + 50890351 CTTGTggctgggtgtggtggctcagacctgtaatcctagcactttgggaggccgaggtgggaagatcagt--------tgagctcaggagtttgagaccaccctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaGCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatccaccagtttggccct-accctccaccttcactgccagcatcttagaaaaaccgagccatagctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtgtgttttcaacagagcagccagaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456423 347 + 49145316 TTTGTggctgggtgtggtggctcaggcctgtaatcctagcactttgggaggccagggtgggaagatcagt--------tgagctcaggagttcgacaccagcctgagctgaacatagtgagac-----ctcgcctctattt-aa----aaaaaaa--aagaaaACTTTTGTGACTGATGTTTc--catgtcatcagtcaacaaattctgtaggtgccatgttct-----------------aagtttggcccctgccctccaccttcactggcagcatcttagaaaaaccaaaccattgctcatttgatcctaatagtgtcctaactcatcccctgccttctagccttgcccctctgttgactgttttcaacagagcagccagaat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=8022.000000 s hg38.chr19_GL949748v2_alt 170928 4 + 1064304 catc s panTro4.chr19 59103618 4 + 63644993 catc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102751347 4 - 106955855 catc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040557 4 + 64156825 catc i rheMac3.chr19 C 0 I 527 s macFas5.chr19 55066104 4 + 59248254 catc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873983 4 + 50890351 catc i chlSab2.chr6 C 0 I 535 s calJac3.chr22 45456770 4 + 49145316 catc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=1508.000000 s hg38.chr19_GL949748v2_alt 170932 5 + 1064304 gtttt s nomLeu3.chr10 102751351 5 - 106955855 atttt i nomLeu3.chr10 C 0 I 3534 s macFas5.chr19 55066108 5 + 59248254 atatt i macFas5.chr19 C 0 I 522 s calJac3.chr22 45456774 5 + 49145316 atatt i calJac3.chr22 C 0 I 1137 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040561 527 + 64156825 I e panTro4.chr19 59103622 0 + 63644993 C a score=28885.000000 s hg38.chr19_GL949748v2_alt 170937 319 + 1064304 tttttttgtttttttttttttttttttttttgaggcggagtctcgctgtcgcccaggctggagtgcagtggcgcgatctctgctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccctagtagccgggactacaggcgcccgccacctcacctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccagaatcatc s panTro4.chr19 59103622 312 + 63644993 -------gtttttttttttttttttttttttgaggcggagtctcgctgtcgcccaggctggagtgcagtggcatgatctctgctcactgcaggctccgccccccgggttcacgccattctcctgcctcagcctccctagtagctgggactacaggcgcccgccacctcacctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccagaatcatc i panTro4.chr19 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e calJac3.chr22 45456779 1137 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=175752.000000 s hg38.chr19_GL949748v2_alt 171256 664 + 1064304 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttcctggagttttccatctcagagtaaaactcaaaggtcctactttgcagcttcctcatgaactggccATGTGCATtctcttccttgcttattattattattattatttattttttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcggcccactgcagcctctgcctcctgggttcaagtgggttcaagcgattctcccacctcagcctcccaagtacctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacagggtttcaccataattgcccaggctcgaactcctgagctcaggcaatccgcccacctcagcctcccaaagtgctaggattatagacatgagccaccgtgcccggccagctttgttcctctttactgctggatattccattgtatggacataaccccattttatttatccattcatcaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTGGTTTTTGttttatttacccttgttcatgcagtatccccaggtccaagaacagttcctggcacac----agcagtcaatacattgttgctaaataa s panTro4.chr19 59103934 665 + 63644993 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttgctggagttttccatctcaaagtaaaactcaaaggttccactttgcagcttcctcatgaactggccATGTGCATTCTCTTCCTTGCttattattattattattat---tattttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcggcccactgcagcctctgcctcctgggttcaagtgggttcaagcgattctcccacctcagcctcccaagtatctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacggggtttcgccataattgcccaggctcgaactcctgagctcaggcaatccgcccacctcagcctcccaaagtgctaggattatagacatgagccaccgtgcctggccAGctttgttcctctttactgctggatattccattgtatggacataaccccattttatttatccattcaccaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTTCTTTTTGttttatttacccctgttcatgcagtatccccaggtccaagaacagttcctggcacacagtaagcagtcaatacattgttgctaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55981355 657 + 60714840 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttcctggagttttccgtctc--agtaaaactc--aggtccCACTTTGCAGCTTCCTCATGAACTGGCCATGTGCATCCTCTTCCTTGCttattattattatttttat-------ttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagcccactgcagcctctgcctcctgggttcaagtggattcaagcgattctcccacctcagcctcccaagtacctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacagggtttcaccataattgcccaggctcgaactcctgagctcaggcaatccacccacctcagcctcccaaagtgctaggattataggcatgagccaccatgcccggccAGctttgttcctctttactgctgaatattccattgtatggacataaccccattttatttatccattcaccaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTGGTTTTGGttttatttacccttgttcatgcagtatccccaggtccaagaacagttcctggcacatagtaagcagtcaatacattattgctaaataa i ponAbe2.chr19 I 1 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e calJac3.chr22 45456779 1137 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=368666.000000 s hg38.chr19_GL949748v2_alt 171920 773 + 1064304 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACATGACTTTCTAAGCATATTTTAAATAAATATACATACGTTAAGGTCATTTTTATTAATGAAAATTGTAGCATACTATGCACACTTCTGCATCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCATAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCGTGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCTGGTGCCATATGACTGGACCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTCATcagttgacccttgagcaacatgggtctgaactgctcgggtccacttttatgcagattGAAAAAAGTAaaggttacacagagcatgcctgcctctcctgctttgccttttacctcctccacctctggcaccctgagacagcaagaccaaaccctcctcttctttctgcacctctgcctactcagaatgaagacaaggatgaagacctttatgatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttctt s panTro4.chr19 59104599 772 + 63644993 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACATGACTTTCTAAGCatattttaaataaatatatataCGTTAAGGTCATTTTTATTAATGAAAATTGTAGCATACTATGCACACTTCTGCATCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCATAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCATGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCCGGTGCCATATGACTGGAGCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTCATcagctgacccttgagcaacatgggtctgaactgctcaggtccacttttatgcagattGAAAGAAGTAaaggttacacagagcatgcctgcctctcctgctttgccttgtacctcctccacctctggcaccctgagacagcaagaccaaaccctcctcttccttctgcacctctgcctactcagaatgaagacaaggatgaagacctttatgatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttc-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55982012 773 + 60714840 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACACGACTTTCTAAGCATATTTTAGATAAATATACATACGTTAAGGTCATTTTTATTAATGCAAATTGTAGCATACTATGCACACTTCTGCAGCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCGTAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCGTGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCCGGTGCCATATGACTGGACCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTTATcagctgacccttgagcaacatgggtctgaactgctcaggtccacttttatgcagattGAAAAAAGTAaaggttacacagagcatgcatacctctcctgctttgccttttacctgctccacctctggcaccctgagacagcaagatccaaccctcctcttccttctccacctctgcctactcagaatgaagacaagaatgaagacctttaggatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttctt i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45457916 759 + 49145316 ATGAGTGGTTTAAACTATCATTTTTAAATCAAGGCTGGCTGAGACAACTTGGAAATTATAATTTCCCCTAATATACGACTTTCTAAGCATATTTTTAATATGCATTTATG----------ATTTTTATTAATGCAAATTGTAGCATACTATACACAC-TCAGCAGCTTGCTTTTTTGATATGCCCAGGCTTGCTTCATTTTTGCAAACAGCTACATGCTTTTGCGTCCTACAGATGGGGCATAATTAGATTGTATTACACTTGTACAAAAGAAAAGAAAGGAATTCAGCTCCCCAAGCATGCCCAACTGGTCCCTGGCAACCCATGATGGAAACCAAGGGTTCCTTTTATATTACCTGTGTGCCTTTCAGAGCAGAAGGGCCAGAGGGCTCCAGGCTGAGTGAAAG-------GGAGGAAGCATGAGGGGTTTGTGGAAGAGGGGCCAGTGCCCTGTGATTGGACCATGCTTCTGAAGAGGATCAAGGTGAGGCCCAGTCTCATcagctgacccttgagcaacatgagtctgaactgctcagctccacttac-tgcagatttAAAGAAGTAaaggtcacac--agcatgcctacctctcctgctttgccttttaccccctccacctctgccaccttgaggcagcaagaccaatccctcctcctcct------cctctgtctactcagcatgaggacaaggatgaagacctttataatgatctgcttcctcttaatgaatagtaaatggattcatgtcttttctcaaagttttcttaatattttatt i calJac3.chr22 I 1137 I 429 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=562914.000000 s hg38.chr19_GL949748v2_alt 172693 1483 + 1064304 ttt----------tttttttttttgagacgaagtctcgctctgtcacccaagctggagtgcagtggcgcgatcttagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctccccggtagctgggactacaggtgcctgccaccacgcccggcaaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcct--gacctggtgatccgcccgccttagcctcccaaagtgctggggtaacaggcatgag--ccatcacgcccggccaatattttcttttctctagcttaattcatcataggaatacagaatataatacatatagcgtataaaatatgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaatgttttttttaa------atcctgagacagtgtcttgctctgccagctgggctggggtgcaggggcatgatcttagttcgctgctgcctcaacctccttgactcaagcagtcctcccaccacagcctcccaagtagctggaactacgggcacacaccaccacacccagtta--------atttttctgttttctgtagagtctgggttttgc-cgtgttgcccaggctgg-------------------------------tcttgaactcctgggctcaagtgctctgcccacctcagcttcccaaatcccacctggggttacaggtgtgagccacggtgcctggcctagtagttaagttttggggaagtcaaaagttatatgcagattttctttcttgatttttttttttttttttttgaggcagtcttgctctgtcgcccaggatggagtgcagtggtgcgatctcggctcactgcaatctccacgtcctgggttcaagcgatgctcttgcctcaacctcctaagtagctgggattacaggcacctgccaccacgcct-gcctaatttttgtatttttagtagagaccaggttttgtcatgttggccaggctggtctcgaactcctgacctcagttgatccgccggccttggccttccacatagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaagactctgtgctggttttcttttctttt-ttttttttttttactctaaatcatcaaaccctatgaggaaagtcctgttactttctcccatttagcactcttgaagaggctaatttgcctaagatcaagagctcgtcagtgactgctgaggttcaaacgcagatcttttttaagacttgagaaccTACAGGTTCAACCACCATTATAAAACCATCTCTGTAATCACGAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTATGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT s panTro4.chr19 59105371 1482 + 63644993 ttt----------tttttttttttgagacgaagtctcgctctgtcacccaagctggagtgcagtggcgcgatcttagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctccccagtagttgggactacaggcgcctgccaccacgcccggctaattttttgtatgtttagtagagatggggtttcaccatgttagccaggatggtctcgatctcct--gacctggtgatccgcccgccttagcctcccaaagtgctgggattacaggcatgag--ccatcacgcccggccaatattttcttttctctagcttaattcatcataggaatacagaatataatacatatagcgtataaaatatgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaattttttttttaa------atcctgagacagtgtcttgctctgccagctgggctggggtgcaggggcatgatcttagttcactgctgcctcaacctccttgactcaagcagtcctcccaccacagcctcccaagtagctggaactacgggcacacgccaccacacccagtta--------atttttctgttttctgtagagtctgggttttgc-cgtgttgccctggctgg-------------------------------tcttgaactcctgggctcaagtgctctgcccatctcagcttcccaaatcccacctggggttacaggtgtgagccacggtgcctggcctagtagttaagttttggggaagtcaaaagttatatgcagattttctttctt--tctttctttctttttttttgaggcagtcttgctctgtcgcccaggatggagtgcagtggtgcgatctcggctcactgcaatctccacgtcctgggttcaagcgatgctcttgcctcaacctcctaagtagctgggattacaggcacctgccaccacgcct-gcctaatttttgtatttttagtagagaccaggttttgtcatgttggccaggctggtctcgaactcctgacctcagttgatccgccggcctcggccttccacatagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaagactctgtgctggttttcttttcttttcttttttttttttactctaaatcatcaaaccctatgaggaaagtcctgttactttctcccatttagcactcttgaagaggctaatttgcctaagatcaagagctcgtcagtgactgctgaggttcaaacgcagatcttttttaagacttgagaacctacaggttcaaccaccattataAAACCATCTCTGTAATCACCAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTATGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55982785 1476 + 60714840 tttgttttttttgtttttttttttgagacggagtctcgctctgtcacccaagctggagtgcagtggtgcaatctcagctcactgcaagctctgcctcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacgcccggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcagtctcct--gacctggtgatcagcccgccttagcctcccaaagtgctgggattacaggcatgag--ccactatgcccggccagtattttcttttctctagcttaattcatcataggaatacagaatataatatatacagcgtacaaaatgtgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaatttttttttttattttttatcttgagacggtgtcttgctctgccagctgggctggggtgcaggggcattatcttagttcactgccgcctcaacctccttgactcaagcaatccttccaccacagcctcccaagtagctggaactacgggcacacgccaccacacccagcta--------atttttctgttttctgtagagtctgggtttcgc-catgttgcccaggctgg-------------------------------tcttgaactcctgggctcaagtgctct----------gcttcccaaatcccacctggggttacaggtgtgagccatggtgcctggcctagtagttaagttttggggaagtcaaaagttttatgcagattttctt------ttcttttttttttttttttgaggcagccttgctctgtcgcccaggatggagtgcagtggtacgatctcggctcactgcaacctccacgtcctgggttcaagcgatgctcttgcctcaacctcctgagtagctgggatttcaggtgcttgccaccatgcct-gcctaatttttgtatttttagtagagaccgggttttgccatgttggccaggctggtctcgaactcctgacctcagttgatctgccggccttggccgtccacaaagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaaggctctgggctggttttttt--------tttttttttttacttctaaatcatcaaaccctatgaggaagctcctgttgctttctcccatttagcactcttgaagaggctaatctgcctaagatcaagagctcgtcagtgacagctgaggttaaaacgcagatcttttttaagacttgagaaccTACAGGTTCAATCACCATTATAAAACCATCTCTGTAATCACGAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTACGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45459104 1346 + 49145316 ttt----------tttttctctctgagacagtgcctcgctctgccacctgggctggggtgcagtggcataatcttggttcactgcagcctcaacctctttggctcaagcagtcttcccacttcagcctcccaagtagctggaactatgggcgcatggcaccacatccagctaatttttc-tgttttctgtagagatgcggttttgccatgttgcccaggctggtctctaatttctaggttcaagtgatctacccacctcagcttcacaaagtgctgggatttcaggtgtgaaatccaccattcctggcc----------------------------------------------tagta---------------------gttaa--------gtt-ttggggaagtcaaaagttacatgcagattttcttttttgtcg------ttgttgaggaa--gtcttgctctgtcacccaggctggagtgcagtggcatgatcttggctcaccgcaacttctgcctcgcgggttcaactgattctcctgtctcagtctcctgagtagctgggattaccggcgcctgcctccatgcctggctaattcttgtattttttttcttttttttgagacggacttttgctcttattacccagactggagtgcaatggtgcgatctaggctcaccacaatctccgccttctgggttcaggcaattctcctgcctcagcctcccgagt---agctgggactacaggcacacaccaccatgcccagctaa---------------------------------------------------tttttatatttttagtagagacggggtttcaccatgttgaccaggatgg-------------------------------tcttgatctcttgacctc--gtgatctacccgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcacccggcctgatttttgtatttttagtagagacggggtcttaccatgttggtcaggctgttctggaactcctgacctcatttgatttgcctgcctcggcctcctacaaagtgctgagattacaggtgtgagccacctcgcccggcctatatggaggttttcagctgagctggagatcaatgctcccagccccctcattggacaggagtcagctg--------GAGGAagcaccttcagtgtgcagggctctggtctgcttttcttttct----ttctttttttttactctaaatcatcaaaccctgtgaggaaagtcctgttacatgctcccacttagcactcttgaagaggctaatttgcctaagattaagagctggccagtgacagctgaggttcaaacaca----tttttt--gacttgagaacctacaggcttagccaccattataAAACCATCTC--TAATCATGAGGCACCTGGAATGTGTGGCGCTTGGACTTCATCCTGAAGGGAGTGAAAAGTTATGGAAGAGTTTTTTCCTCTCATGTTTTCCCCTTCCTGAT i calJac3.chr22 I 429 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=94504.000000 s hg38.chr19_GL949748v2_alt 174176 57 + 1064304 GAATAATAT-ACGCGTGTTCAAGATACAAAAATGCATAAAATTTggccaggcatggtg s panTro4.chr19 59106853 57 + 63644993 GAATAATAT-ACGCGTGTTCAAGATACAAAAATGCATAAAATTTggccaggcatggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984261 57 + 60714840 GAGTAATAT-ACGCGTGTTCAAGATATAAAAATGCATAAAATTTggccgggcatggtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041088 57 + 64156825 gaataatat-ACGCATGTTCAGGATACAAAAATATATAAAATTTggccgggcatggtg i rheMac3.chr19 I 527 C 0 s macFas5.chr19 55066635 57 + 59248254 gaataatat-ACGCATGTTCAGGATACAAAAATATATAAAATTTggccgggcatggtg i macFas5.chr19 I 522 C 0 s chlSab2.chr6 46874522 57 + 50890351 gaataatat-ACGCGTGTTCAAGATACaaaaatgcgtaaaatttggccgggcatggtg i chlSab2.chr6 I 535 C 0 s calJac3.chr22 45460450 58 + 49145316 GAAAAATGTAAAGCGTGTTCAAGATAAAAAAATGCATAAAATTTGGCCGGGCTCAGTG i calJac3.chr22 C 0 I 15 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=743525.000000 s hg38.chr19_GL949748v2_alt 174233 605 + 1064304 gcttacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaacaacaaaacaaaCAAACAAAAAACCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGATGGTAGCTACCactaggcgctttatttatgc----cactctcctcaacactggatagactctcacttaatcctcac----aagcttatgaggtaggcgctaccatcattcgccgttttacagaggaggacgctgaggcacagagtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGGCGGGTGGGACTGCTTCCTGAGGAGATAGTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatataaaaagagaactctAggtcaggcgcggtgg s panTro4.chr19 59106910 609 + 63644993 gcttacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaacaacaaaacaaaCAAACAAAAAACCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGATGGTAGCTACCactaggcgctttatttatgccagacactctcctcaacactggatagactctcacttaatcctcac----aagcttatgaggtaggcactaccatcattcgccgttttacagaggaggacgctgaggcacagagtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGGCGGGTGGGACTGCTTCCTGAGGAGATAGTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatataaaaagagaactctAGGTCACgcgcggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984318 596 + 60714840 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaataaca----aaacaaaCAAAAAACCCTTAAAACTGAACAAGGTAGTTTGTAAGATATGGAAATACAATGCAGATGGCGATAATGACGatggtagctaacactaggccc----tttatgccagaca--ctcctaaacactggatagactctcacttaatcctcac----aagcttatgaggtgggcactaccatcattccccgttttacagaggaggacgctgaggcac--agtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGACGGGTGGGACTGC-TCCTGAGGAGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatacaaaaagagaactctAggtcaggcgcggtgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041145 602 + 64156825 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcctgggcaacatggcaaaaccccatttcaaaac--------aaacaaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacgccagacactttcctaaacactggatagactctcacttaagcctcacaaataagcctctgaggtaggcactaccatccttccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACAGCTTCCTGAGGGGATACTGA-TGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCT---GTGGAGACAGATCATCGCATCCGGTGTGGACAGAtgggtatgcaagcggacaataaccagactatatataaaaagagaa--ctAggtcaggcgcggtgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55066692 599 + 59248254 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcccgggcaacatggcaaaaccccgtctca------------aaataaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacgccagacactttcctaaacactggatagactctcacttaagcctcacaaataagcctctgaggtaggcactaccatccttccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACAGCTTCCTGAGGGGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCT---GTGGAGACAGATCATCGCATCCGGTGTGGACAGATGGGTATGCAAGCAGACAATAACCAGACTATATATAAAAAGAGAA--CTAggtcaggctcggtgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46874579 602 + 50890351 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcctgggcaatatggcaaaaccccgtcttaaaac--------aaacaaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacactagacactttcctaaacactggacagactctc----aatcctcacaaataagcctatgaggtaggcactaccatcattccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACTGCTTCCTGAGGAGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCTATGGTGGAGACAGACCATTGCATCCGGTGTGGACAGAtgggtacacaaacggacaataaccagactatatataaaaagagaa--ctAggtcaggcgcggtgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e calJac3.chr22 45460508 15 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=74016.000000 s hg38.chr19_GL949748v2_alt 174838 43 + 1064304 ctcacacctgtaatcttagcactttgggaggctgaggcgggtg s panTro4.chr19 59107519 43 + 63644993 ctcacacctgtaatcctagcactttgggaggctgaggcgggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984914 43 + 60714840 ctcacacctgtaatcctagcactttgggaggctgaggcgggtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041747 43 + 64156825 ttcacacctgtaatcccagcactttaggaggctgaggcgggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55067291 43 + 59248254 ttcacacctgtaatcccagcactttaggaggctgaggcgggtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46875181 43 + 50890351 ttcacacctgtaatcccagcactttaggaggctgaggtgggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45460523 40 + 49145316 ctcacacctgtaatccctgcactttgggaggccgaggcgg--- i calJac3.chr22 I 15 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=474825.000000 s hg38.chr19_GL949748v2_alt 174881 227 + 1064304 gatcacttgaggtcaggcgttggagaccaggagttcaaaaccccgtctctac-taaaaatttaaaaattagccgggcatggtggtgggcgcctgtagtcccagcttctcgggaggctgaggcacgagaatcgattgaacccgggaagcggaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacgagagcgaaaaactccgtctcaaaaataaa s panTro4.chr19 59107562 227 + 63644993 gatcacttgaggtcaggcgttggagaccaggagttcaaaaccccgtctctac-taaaaatataaaaattagccgggcatggtggtgggcgcctgtagtcccagcttctcgggaggctgaggcacgagaatcgattgaacccgggaagcggaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacaagagcgaaaaactccgtctcaaaaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984957 219 + 60714840 gatcacttgaagtcaggcgtttgagaccaggagttcaaaaccccgtctct-------aatataaaaattagctgggcatggtggtgggcacctgtagtcccagcttctggggaggctgaggcacgagaatcgattcaacctgggaagccgaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacaagagcg--aaactccgtctcaaaaataaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041790 217 + 64156825 gatcacctgaagtcaggcgtttgagaccgggcgttcgaaaccccgtctctac-taaaaacataaaaattagccgggcatggtggtgggcgcctgtagtcccagctactcgg--------ggcacgagaaccgattgaaccggggaagcagaggttgcaatgagccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccatctcaaaaataaa i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55067334 217 + 59248254 gatcacctgaagtcaggcgtttgagaccgggcgttcgaaaccccgtctctac-taaaaacataaaaattagccgggcatggtggtgggcgcctgtagtcccagctactcgg--------ggcacgagaaccgattgaacccgggaagcagaggttgcaatgagccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccatctcaaaaataaa i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47169350 218 + 51301725 gatcacttgaagtcaggcgtttgagaccggGCGttcgaaaccccgtctctacttaaaaacataaaaattagccgggcatggtggtgggcgcctgtagtgccagctactcgg--------ggcacgagaatcgattgaacccgggaagcagagcttgcagtgagccgagatcgcgc-cactgcactccagcctgggtgacaagaggg--aaactccgtctcaaaaataaa i papAnu2.chr19 M 1926 I 5 s chlSab2.chr6 46875224 217 + 50890351 gatcacttgaagtcaggagtttgagaccgggcattcgaaaccctgtctctac-taaaaacataaaaattagccgggcatggtggtgggcacctgtagtcccagctactcgg--------ggcacgagaatctattgaacccgggaagcagaggttgcagtgaaccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccgtctcaaaaataaa i chlSab2.chr6 C 0 T 10752 s calJac3.chr22 45460563 223 + 49145316 -atcacttgaggtctggagtttgagaccaggagttcgaaaccccgtttctac-taaaaatacaaaaattagcctggcatggtggtgggcgcccatagtcctagttactcgtgaggctgaggcatgaaagtcgattgaaccagggagtcgaaggctgcggtgagctgtgatctcgcgcactgtactccagcctgggtgac--gagtg--aaactccatttcaaaaataaa i calJac3.chr22 C 0 I 5 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I a score=28651.000000 s hg38.chr19_GL949748v2_alt 175108 12 + 1064304 ataaaTTACTGA s panTro4.chr19 59107789 12 + 63644993 ataaaTTACTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985176 12 + 60714840 ataaaTTACTGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60042012 12 + 64156825 ataaaTTACTGA i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55067556 12 + 59248254 ataaaTTACTGA i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47169573 12 + 51301725 ataaattagtga i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 46864689 12 + 50890351 aTAAATTACTGA i chlSab2.chr6 T 10752 C 0 s calJac3.chr22 45460791 12 + 49145316 gtaaaTTACTGA i calJac3.chr22 I 5 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I a score=1504910.000000 s hg38.chr19_GL949748v2_alt 175120 560 + 1064304 TAATAGTACTAATACCCCTTAAGTGGCTAT-TGATAATAATAGTACCAT---GGGTGGGGGGGCAACTTCTCTGAGAGTGCTCTG-----TAAGTAtgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacat----agcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt--gggggggccacggcgggaggctctctcgaggccgggagttcaagaccagcctgggcaacatggcaagacgccgactgtt----a---aaaaaaaaaaaatgctacccgggcgtcg---tggcgtgtgcctgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggcctcagtgagccgaaatcacgccactgcactccagcctgggcgacggagcgagaccctg--tctcagaaagaaaaaga-aaaaCCACCGTCCAGGGGCGGAGAAGGAAGGTTCTCCCTACTTCTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT s panTro4.chr19 59107801 565 + 63644993 TAATAATACTAATACCCCTTAAGTGGCTAT-TGATAATAATAGTACCAT--GGGGGGGGGGGGCAACTGCTCTGAGAGtgctctg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacat----agcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt--gggggggccacggcgggaggctctctcgaggccaggagttcaagaccagcctgggcaacatggcaagacgccgactgttaaaaa---aaaaaaaaaaaaagctacccgggcgtcg---tggcgtgtgcatgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggccgcagtgagccgaaatcacaccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaaaaga-aaaaCCACCGTCCAGGGGCGGAGAAGGAAGGTTCTCCCTACTTCTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985188 559 + 60714840 TAATAGTATTAATACCCCTTAAGTGGGTAT-TG---GTAATAGTACCGT--GGGGCGGGGGGCCAACTTCTCTGAGAGtgctccg-----taagtatgtattgaagattgagtaaatacatttaaaattcttacaacagtaggtggcacatagaaagcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgtctgtaatcccagcacttt---ggggggccaaggcgggaggctctctcgaggccaggagttcaagaccagcctgggcaacatggcaagacgccgactgtt---------aaaaaaaaaaatgttacccgggcgtcg---tagcgtgtgcctgtaattccagctactggggaggaggtgggacgatcgctcgagcccgagaggttggtcggggctgcagtaagccgaaatcacgccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaagaga-aaaaCCACCGTCCAAGGGCGGAGAAGGAAGGTTCTCCCTGCTTCTCAGGTTTCCACTCCTTGGCCGGAAAAAGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102754890 553 - 106955855 TAATAGTATTCATACCCTTTAAGTGGGTAT-TG---GTAATAGTACCAT-GGGGGGGGGGGGGCAACTTCTCTGAGAGtgctccg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacatagaaagcgttccagaatgccacattattgttAGTGAC--AAATAATCTCggctgggcgcggtggctcatgcctgtaatcccagcacttt---ggggggccacggcgggaggctctctcgaggccaggagttcaaggacagcctgggaaacatggcaagacgccgactgtt-----------aaaaaaaaaagttacccgggcgtcg---tggcgtgtgcctgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggctgcagtgagccgaaatcacgccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaagaga-aaaaCCACCGTCCAGCGGCGGAGAAGGAAGGTTCTCCCTA---CTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT i nomLeu3.chr10 I 3534 C 0 s rheMac3.chr19 60042024 561 + 64156825 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCCT-----GGGGGAGGGCAACTTCTCCGAGAGtgctcca-----taagtatgtattgaagattgagtaaatacttttaaaattcttagaacagtatgtggcacatagaaagcgttccataatgccacattattgtCAGTGACAGAAATAACCTCggctgggcgcggtggctcacgcctgtaattccagcacttt---ggggggccaaggtgggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgccgattgtacca-----aaaaaaaaaaaaagttacccgggc-tcg---tggcgtgtgcttgtaatcccatctactggggaggaggtgggaggatcgctcaagcccgagaggttggtcggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctgattctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCTATTCCTTGCCCGGAAGAAACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55067568 548 + 59248254 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGtgctcca-----taagtatgtattgaagattgagtaaatacttttaaaattcttagaacagtatgtggcacatagaaagcgttccataaTGCCACATTATTGTCAGTGACAGAAATAACCTCggctgggcgcggtggctcacgcctgtaattccagcacttt---ggggggccaaggtgggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgccgattgtacc------aaaaaaaaaaaaagttacccgggc-ttg---tggcgtgtgcttgtaatcccagctactggggaggaggtgggaggatcgctcaagcc------------cggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctgattctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCTACTCCTTGCCCGGAAGAAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47169585 552 + 51301725 taATAGTACTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGTGCTCCA-----TAAGTATGTATTGAAGATTGAGTAAGTACATTTAAAATTCTTAGAACAGTATGTGGCACATAGAAAGCGTTCCATAATGCCACATTATTGTCAGTGACAGAAATAacctcggctgggcgcggtggctcacgcctgtaatcccagcacttt---ggggggccaaggcaggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgcCGActgtaccaaaaagaaaaaaaaaaaaagttacccgGGC-TCG---TGGCgtgtacttgtaatcccagctactggggaggaggtgggaggatcgctcaagCCCGAGAGGTTGGTCGGGGcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctg--tctcagaaagaaagaga-aataccaCCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTC------------TCCTTGCACGGAAGAAACCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864701 557 + 50890351 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGTGCTCCA---------TAtgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacatagaaagcgttccataatgccacattattgtCAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt---ggggggccaaagcgggaggctctctcgaggccaggagttcaagaccagactgggcaacatggcaagacgctgactgtaccaaa---agaaaaaaaaaaagttacccgggc-tcg---tggcgtgtgcttgtaatcacagctactggggaggaggtgggaggatcgctcaagccggagaggttcgtcggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctg--tctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCCACTCCTTGCACAGAAGAAACCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45460803 564 + 49145316 TAATGCTATTAATATTTCTTAAGCGAGAATCTC---ATAATAGTACCCTTTGGTGAGGGGGGGCACCTTCTCTGAAAGTGCTCCGTAACATAAGTATATACTGAGGATTGAGTAAATCCATTTAAAATTCTT-----AGTATGTGTCACAC----AGCGTTCCAGAATGCCACATGATTGTTCGTGACAGAAATAATCTCggctgggcgcggtggcacacgcctgtgatctcagcactttggggggggaccaaggcggaaggacctctcgaggccaggagttcgagaccagcctggacaacgtagcaagacgccgactgt---------acaggaaaaaaaagttacccgcgc-gcgcgctggcgtgtacctttaatcccatctactccggaggaagtgggaggatcgctcgagcccgagaggttggtcggggctgcagtgagcagagatcatgcaactgcaccccggcttgggcgacagagggagaccttg--tctcaaaaagcaaaagaggaaaCCACAGTCCAGGGATGGAGAAGGAAGGTTCTCCGCACTTGTCAAGTTTCCACTCCTTAGCCGGAAGAAAGCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I a score=48771.000000 s hg38.chr19_GL949748v2_alt 175680 15 + 1064304 AGTCCTCCCAGGTTA s panTro4.chr19 59108366 15 + 63644993 AGTCCTCCCAGGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985747 15 + 60714840 AGTCCTCCCAGGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102755443 15 - 106955855 AGTCCTCCCAGGTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042585 15 + 64156825 AGTCCTCCGAGGTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068116 15 + 59248254 AGTCCTCCCAGGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170137 15 + 51301725 AGTCCTCCCAGGTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865258 15 + 50890351 AGTCCTCCCAGGTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461367 15 + 49145316 AGTCATCCCAGTTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3703894 15 + 145441459 AGTCGGCCCAGCGAA i mm10.chr7 I 2697 C 0 e canFam3.chr1 19659152 64854 - 122678785 I a score=645206.000000 s hg38.chr19_GL949748v2_alt 175695 192 + 1064304 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGAAAACGTCACGAGACGCCGGCGTTACTATAAGAGCGCAGCCGTGGCGCTTGCGCGCCTCTTTCTCAGTGACCGGGTGGTTTGCTTA-GGTGAGGTGCGGCGG-TGT s panTro4.chr19 59108381 192 + 63644993 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGATAACGTCACGAGACGCCGGCGTTACTATAAGAGCGCAGCCGTGGCGCTTGCGCGCCTCTTTCTCAGTGACCGGCTGGTTTGCTCA-GGTGAGGTGCGGTGG-TGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985762 192 + 60714840 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGATAACGTCACGAGGCGCCGGCGTTACTATAAGAGCGCAGCCGTGTCACTTGCGCGCCTCTTTCTCAGGGACCGGGTTATGCGTTCA-GGTGAGGTGTAGTGG-TGT i ponAbe2.chr19 C 0 I 8 s nomLeu3.chr10 102755458 192 - 106955855 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCC--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCATGGTGCGTGATAACGTCACGAGGCGCCAGCGTTACTATAAAAGCGCAGCCGTGCCGGTTACGCGCCTCTTTCTCAGCGACCGGGTCTTTCGCTCA-GGTGAGGTGCGGTGG-TGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042600 192 + 64156825 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTGCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGTAGCCTTGTCGCCGGCGCGCCTCTTCGTCAGTGGCCGGCTCTTGCGCTCA-GGTGAGATGTGGTGA-TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068131 192 + 59248254 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTGCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGTAGCCTTGTCGGTGGCGCGCCTCTTCGTCAGTGGCCGGCTCTTGCGTTCA-GGTGAGGTGTGGTGA-TGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170152 192 + 51301725 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGACGCGCCGGCGTTACTATAAGAGCGTAGCCCGGTCGCTTGCGCGCCTCTTTGTCAGTGGCCGGGTCTTGCGCTTA-GGTAAGATGTGGTGA-TGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865273 192 + 50890351 GTACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTTCT--TAGCCAGTCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGCAGCCTGGTCGCTTGCGCGCCTCTTTGTCAGTGGCCGGGTCTTTCGCTTA-GGTAAGTTGTGGTGA-TGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461382 192 + 49145316 GCACGCCGCTCTAGCCCAGACTCACATCTCGACTGCTTCT--CCGCCAGCCAACGCCTCCTCTGATTGGCTCAGACGTGCGTTGTGCGTGATAAGGTCACGAGGCGCTGGCGTTACTATAAGAGCGCAGCTGTGTCGCGTGCGCGTCTTTTTCTCAGTGTCCGGGCCCCGTACTTA-GGTGAGGTGTGGTGA-TGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3703909 172 + 145441459 G--CGCCGCTCTAGCCGGCCTGCTCGTCTCTATGGCTTTC--CTG-------------CTTCTGATTGGCGTAGTCGCGAGCGGTGCGTGATGACGTCACTACAAGGCGACGTTACTATAAGACCTCGGTCCAACCGCCT-TGTCTCTCTTTGTCTCGGGCCTGA----GTTCGTA-GGTGAG-TGTTCTGATTGT i mm10.chr7 C 0 I 3 s canFam3.chr1 102989285 186 + 122678785 GCTCGTCGCTCTGGCCCAACCTCTCGTCTCGAATGCTTTTTCCCGTCCGCCTACGCCTCTTCTGATTGGTGCAGATGTGCGGCGTGCGCGCTGACGTCACCAGGCCGCGGCGTTGCTATAAAAGCGTGCTCGGG--GGCCGCGTGCTTCTCTTTCTCCGGTCTGG----GAGCTCACGGTAAGGAGTAGTGT---- i canFam3.chr1 n 64854 C 0 a score=28137.000000 s hg38.chr19_GL949748v2_alt 175887 15 + 1064304 GCTTTTTCTCTAGGG- s panTro4.chr19 59108573 15 + 63644993 GCTTTTTCTCTAGGG- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102755650 15 - 106955855 GCTTTTTCGCTAGGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042792 15 + 64156825 ACTTTTTCGCTAGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068323 15 + 59248254 CCTTTTTCGCTAGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170344 15 + 51301725 CCTTTTTCGCTAGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865465 15 + 50890351 GCTTTTTCGTTAGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461574 15 + 49145316 GCTTTGTGGCTAGGG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3704084 15 + 145441459 GTTCGCCTTTTAGGG- i mm10.chr7 I 3 I 1 s canFam3.chr1 102989471 15 + 122678785 -GTTGTGCCCGCGGGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55985954 8 + 60714840 I a score=1386271.000000 s hg38.chr19_GL949748v2_alt 175902 423 + 1064304 -----TTTGGGTTGGATGGTGGCCCGGGCCTTCCGAGTTTCCATGAGTAAGCTAAAGACGTTAGGAAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTGTGGGGGCAGATACTGACTATGAGAGCGTTGGAGGTTATTCTCGCGAGATCGGATCTGGGCTCCGCGAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTTTGG--AGCC-CTTACGCTCACACTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA s panTro4.chr19 59108588 417 + 63644993 -----TTTGGGTTGGATGGTGGCCCGGGCCTTCCGAGTTTCCATGAGTAAGCTAAAGACGTTAGGAAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTGTGGGGGCAGATACTGACTATGAGAGCGTTGGAGGTTATTCTCGCGAGATCGGATCTGGGCTCTGCGAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTCTGG--AGCC-CTTACG------CTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985962 423 + 60714840 -----TTTGGGTTGGATGGTGGCCTGGGCCTTCCGAGTTTCCATGAGTAACCTGAAGACGTTAGGGAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTTTGGGGGCTGATACTGACTGTGAGAGCGTTGGAGGTTATTCTCGCGAGATCCGATCTGGGCGCCGCGAGTTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCTGG--AGCC-CTTACGCTTATGCTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA i ponAbe2.chr19 I 8 C 0 s nomLeu3.chr10 102755665 422 - 106955855 -----TTTGGGCCGGATGGTGGCCTGGGCCTTCCGAGGTTCCATGAGTAAGCTAAAGACGTTAGGGGTGAGAGC-AGGGTGGTTGAACGGGAGTGCGGCACGGTTGTGGGGGCGGATACTGACTATGAGACCATTGGAGGTTATTCTCGCGAGATTCTATCTGGACGCCGCGAGGTTTTGGCGTAGTTTTGGGACTGCGCAGGCGCTGCTTGG--GGCT-CTTA-ACTCACGCTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAATATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGAGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGAATGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042807 426 + 64156825 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACAGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGAGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTGCGGCTTCCGGGAGGAGGCGGGTAGCACGTGGATGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068338 426 + 59248254 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACAGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGCGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTTTGGGAAGTGGTGCGGCTTCCGGGAGGAGGCGGGTAGCACGTGGATGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170359 426 + 51301725 -----TTTGGGTTGGATGGTCACGCGGGCCTTCCAAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTACAACACGGTAGTGGGGGAGGATACTGGCGGTGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAGTCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGCGGAGGCCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTTCGGCTTCCGGGAGGAGGCGGGTAACACGTGAATGa i papAnu2.chr19 C 0 M 1331 s chlSab2.chr6 46865480 423 + 50890351 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACGGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGTCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTATGTCGCAAAACTTACGTGACCCCGCGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTTCGGCTTCCG---GGAGGCGGGTAACACGTGGATGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461589 409 + 49145316 -----TTTGGGCTGGATGTTCGCGCGGGCCTTCCGAGCTTCCATGAGCAAGCTAAAGACGTTAGGGATCAGAGC-AGGGAGGCTGAATGAGAAAGCAGCACGGTTTTTGGGGCGGATACTGATTATGAAAGCTTTTGAAGTGATTCTCGCGAGATCCAATCTGGGCGCCGCGAAGTTTTGGCGCAGTTGTGGGACTGCGCTGGCGCCACCTAG--AGCC-CTCATTTTCCAACTTTCCTTCCGCGCAGGCGCAGACGGGTAAGCGGAGCCAGCCAGCATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGCC----TTCCGAGAGGCG---------------------GGTTAGCACGTGGATGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3704100 406 + 145441459 -----TTGATGGTGTAAGGTAACG-GAGCCATTCGAATCTTCATGAACATGCTGA----GTAAGAGGGTGGGGCGAAGGTGGCTGGAAG---TTACAACACGGTTGTGGAA--CAATCCCATTTTCAAGTTTTCTAAGGCGGATTTCTCTGAGAGCCGAGTTGGTGTCGCCGTGTCCCTAGCGGGGTTTTG---CTGCACATGCGCCACAAGATTATTT-TTTAAAACGACACTTTACT---GCGCAGGCGCAGCCGGCCTAGCGA----GGTCAACATGCCGGTCGCCAGAAGCTGGGTTTGTCGCAAAACCTATGTGACCCCACGGAGACCCTTCGAGAAGTCGCGTCTCGACCAGGAGCTAAAGTTGATTGGTGAGTGGCCAAAGTAGAATTTCGAATTGCGG------ATCCGGGAAGAGTTAGGTAGCC-----ATGA i mm10.chr7 I 1 I 4 s canFam3.chr1 102989486 286 + 122678785 CAGGGGGTGGGTTGCGAGGTCG-----------------------------------------------------GAGACGGTCAGATGAGACTGCAGCGCGGGAGTGTGGG---------------------------------TTCGCTAG-------------------------------------GGGGCCGCGTAGGCGCCGTCCAC--GCCCACACGGGCCCTTCTTGCCCTCCCGCGCAGGCGGACGC------GCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTGTGTCGTAAGACTTATGTGACCCCTCGGAGGCCCTTCGAGAAGTCGCGCCTCGACCAGGAACTGAAACTGATCGGTGAGTAGCCTGGAC------CCG------GCTTCCGCTTCCG---GGTGAGGG-------GTGGGCGA i canFam3.chr1 C 0 C 0 a score=207965.000000 s hg38.chr19_GL949748v2_alt 176325 113 + 1064304 AGGTGCCCA-TGTACTCTATCTAGTCCGTCCCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGATTCCAAAGCTGCCAGTCTAGTTGTTGTGCCAGTACGTGGGAC s panTro4.chr19 59109005 113 + 63644993 AGGCGCCCA-TGTACTCTATCTAGTCCGTCCCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGAATCCAAAGCTGCCAGTCTAGTTGTTGTGCCAGTACGTGGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986385 113 + 60714840 AGGCGCCCG-CGTGCTCGATCTAGTCCGCCTCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGTATCCAAAACTGCCAGCCTAGTTTTTGTGCCAGTACGTGGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756087 114 - 106955855 ACGCGCCCAGGGTGCTCGATCTAGTCCGCCCCCTAAATTTGGTACTAT----TGGTGGTTTAGGAAGGTTTTGTGTATCCAAAGCTGCCAGCCTGGTTTTTGTGCCGGTACGTGGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043233 113 + 64156825 AGGCGCCCA-CGTGCTTGATCTAGTCGGCCCCCTAAATTTGGTACTCT----TCGTGGTTTGGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55068764 113 + 59248254 AGGCGCCCA-CGTGCTTGATCTAGTCGGCCCCCTAAATTTGGTACTCT----TCGTGGTTTGGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i macFas5.chr19 C 0 I 18 s chlSab2.chr6 46865903 113 + 50890351 AGGCGCCCA-CGTGCTTGATCTAGTCTGCCCCCTAAATTTGGTACTCT----TCGTGGTTTAGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i chlSab2.chr6 C 0 I 10741 s calJac3.chr22 45461998 113 + 49145316 GGGTGCCCA-CGTGCTCGATCCAGTCTGCCCTCTAAATTTGGCACTGT----TCGTGGTGTAGAAAGGTTTTGTTTGTCCAACGTTGCCGGCCTAGTTTTTGTACTAATCTCCGAGAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3704510 93 + 145441459 TGTCTCCCA-CGTGCTCGTTCTGGAGCATCCT----GTGTGGCGCCAGAGGATTGCAGTTTA-----GTTTTGTGTTCTC-------------TAGTCGCCATGC--ACATGTAGTAA i mm10.chr7 I 4 I 5 s canFam3.chr1 102989772 37 + 122678785 -GGCCGCCG-CGTGCTGGCTCTGCGCCACCTGCCGGGCC------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47170785 1331 + 51301725 M a score=594972.000000 s hg38.chr19_GL949748v2_alt 176438 164 + 1064304 TACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG s panTro4.chr19 59109118 164 + 63644993 TACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCTCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986498 164 + 60714840 TACACTTG-TTCACCCCTTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756201 164 - 106955855 CACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAATAAACGTGAGGTCTGGAGGGTCAAATTTACCTTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGTGTATGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043364 164 + 64156825 TACACTTT-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTACGTATGGG i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55068895 164 + 59248254 TACACTTT-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTACGTATGGG i macFas5.chr19 I 18 C 0 s chlSab2.chr6 46876757 164 + 50890351 TACACTTG-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGACTGTTCGAAGGTACGTGTGGG i chlSab2.chr6 I 10741 C 0 s calJac3.chr22 45462111 170 + 49145316 TAAACTTG-TCCATCTCCTTCTCCCCACCATATGCAGGCGAGTATGGGCTTCGGAACAAACGTGAGGTCTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGCAAGGCCGCCCGAGAGCTGCTGACACTTGACGAGAAGGATCCACGGCGTCTTTTCGAAGGTGCGTATGGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3704608 171 + 145441459 GGCTCTTGCCCCGCGGTCTCCTCCCAACCACGTGCAGGAGAGTATGGACTCCGGAACAAACGTGAGGTTTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGTAAGGCGGCCCGGGAGCTGTTGACGCTAGACGAGAAGGATCCCCGGCGTCTGTTTGAAGGTGTGTATGAG i mm10.chr7 I 5 I 907 s canFam3.chr1 102989809 163 + 122678785 CCCAGCCA-GCCAGCGCCCTGTCTCCG-------CAGGCGAGTACGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAGCTGCTGACGCTGGACGAAAAGGACCCGCGGCGCCTGTTCGAAGGTGTGTGTGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47170785 1331 + 51301725 M a score=24664.000000 s hg38.chr19_GL949748v2_alt 176602 9 + 1064304 AGTCCACAG s panTro4.chr19 59109282 9 + 63644993 AGTCCACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986662 9 + 60714840 AGTCCACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756365 9 - 106955855 AGTCCACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043528 9 + 64156825 AGTCCACAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069059 9 + 59248254 AGTCCACAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46876921 9 + 50890351 AATCCACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462281 9 + 49145316 AGCCCACAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102989972 9 + 122678785 CGTGCACGG i canFam3.chr1 C 0 I 483 e mm10.chr7 3704779 907 + 145441459 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=1072851.000000 s hg38.chr19_GL949748v2_alt 176611 528 + 1064304 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGTTGC-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAACCAGCCTTCTAAC------TTTTAGTGGCACTTGTGAAGTAGGAAAAGTGTATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTATTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGCCTGGCACACCTGGGCACCCGTCTATATCTTTAT-----------------ATTCTGTTTATGTGGCCTGTTTGCTAGTGGATGAGAGTAGACTATGAAGTGGAATTTCTGGGCTAAGTGATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTATTG--TTTTTTTAATTAAGTTTTCTCGttttatttagtcttttgagacggagtcttgctctgttgcccaggctggagtgccgtggcgccatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg s panTro4.chr19 59109291 544 + 63644993 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGTTGC-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGTAGGAAAAGTGTATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGATAAAGATAGGCCTGGCACACCTGGGCACCCGTCTATATCTTTATATGATGTCTC-AAAACAATTCTGTTTATGTGGCCTGTTTGCTAGTGGATGAGAGTAGACTATGAAGTGGAATTTCTGGGCTAAGTTATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTGTTG--TTTTTTTAATTAAGTTTTCTCGttttatttagttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986671 543 + 60714840 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGGTGT-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGTAGGAAAAGTGGATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTGGTAATGACCAGAGCTAAAGATAGGCCTGGCACACTTGGGCACTTGTCTGTGTCTTTATATGATGTCTC-AAAACAGTTCTGTTTATGTGGCCTGTTTGTTGGTGGATGAGAGTAGACTATGAAGTGGGATTTCTGGACTAAGTGATGGTGGTAACAGGGTTTGCACGTTTGCTTGGTTTATTG--TTTTTTTAATTAAATTTTCTCGTGttattta-ttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756374 537 - 106955855 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTAATTCTGCCTTCTGCTGC-----CTCTGTTCCAGTGATGAGAG--GTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGGAGGAAAAGTGGATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAACGACCAGAGCTAAAGATAGGCCTGGCACACTTGGGCACCTGTCTA------TATATGATGTCTC-AAAACAGTTCTGTTTCTGTGGCCTGTTTGCTGGAGG-TGAGAGTAGACTATGCAGTGGAATTTCTGGACTAAGAGATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTATTGTTTTTTTTTAATTAAACTTTCTCGttttatttatttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcagcttactgcaacccctgcttcctgggttcaaacaattctcctatctcagcctcccaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043537 543 + 64156825 CAGAGCGATGGGGCGCAGGGCTTGTGAGGGGCATTCTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGGCAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGCGGAGTAGGAAATGTGGAACTGGATC--AGTCTTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGCCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTGTGTGGCCTGTTTGCTGGTGG-TGAGAGTAGACTAGGAAGTGGAATTTCTGGAATAAGTGATGGTGGTAACAGGGTTTGCACGTTTGCTTGCttta-----tttttttttttaattttttttgttttgtttatttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggctcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069068 541 + 59248254 CAGAGCGATGGGGCGCAGGGCTTGTGA-GGGCATTCTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGACAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGCGGAGTAGGAAAAGTGGAACTGGATC--AGTCTTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGTCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTGTGTGGCCTGTTTGCTGGTGG-TGAGAGTAGACTAGGAAGTGGAATTTCTGGAATAAGTGATGGTGATAACAGGGTTTGCACGTTTGCTTGCttta------tttttttttaaattttttttgttttgtttatttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggctcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46876930 539 + 50890351 CAGAGCGACGGGGCGCAGGGCTTGTGAGGGGCATACTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGACAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGTGGAGTAGGAAAAGTGGAACTGGATCAGAGTCGTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTGAGTTTGGTAATGACCAGAGCTAAAGATAGGCCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTATGTGGTCGGTTTGCTGGTGG-CGAGAGTAGACTATGAAGTGGAATTTCTGGAATAAGTGATGGTGATAACAGGGTTTACACATTTGCTTGCTTTA-----TGTTTTTAAAAAATtttttttgt----tttatttttttgggac--agtcttgctctgttgcccaggctggagtgcagtggctcaatttcggcttactgcaacccctgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462290 522 + 49145316 CAGAGGGATGGACCGCAGGGCTTGGGAGGTTCATTGTCCCTTATTGTGAGGCTGCTCTGTTCCAATGATGGGAGTTGTGACCTTGGACAAACAGAGACAGCCTTTTAACTTGGTGTTTTAATGGGACTTGTGGAGTAGGAACAGTGGAGCTGGATC--AGTCTTTGCCCTGTTTCCTAGCTCTGTGGC-TTGTTACCCAGTTCCTGGACTTTGAGTTTAGTAATGACCAGAGCTAAAG--AGGCCTGGCACACTTGGGCACCTGACTATATCTTTATATGATGTCACAAAAACAATTCTGATCATGTGACCTCCTTGCTAGTGG-TGAGAGTAGACTGTGAAGTCGAATTTCTGGAATGAGTGATGGTGATAACAGGTTTT-CACATTTGCTTAT---------TTTTTTAAATTAAA--------------------ttttgagacagaatctcacttta--gcccaggttagagtgcaatggcaggatctcagctcactgcaacctgcacctcccgggttcaagcaatactcctgcctcagcctcccaagtagctggg i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=273581.000000 s hg38.chr19_GL949748v2_alt 177139 164 + 1064304 actacagacaggcgcacgccaccacacctggctaattttacttttgagacggagtctcgctccattgcccatgctggagtgtagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaagcgattctcctgtcttagcctcctaagtagctgga s panTro4.chr19 59109835 164 + 63644993 actacagacaggcgcatgccaccacacctggctaattttacttttgagacggagtctcgctctattgcccatgctggagtgtagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaagcgattctcctgtcttagcctcctaagtagctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987214 164 + 60714840 actacagacaggcgcacgccaccacgcctggctaattttacttttgagatggagtctcgctctattgcccgtgctgtagtgcagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaaacgattctcctgtcttagcctcctaagtagctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756911 164 - 106955855 actacagacaggcacacgccaccacgcctggctaattttacttttgagacggagtctcgcgctgttgcccatgctggagtgcagttgtcgcaatcttggctccctgcaaactccgcctccagattgcaagcgattctcctgtcttagcctcctaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044080 164 + 64156825 actacagacagtcacacgccaccacgcccggctaattttacttttgattcggagtctcgctcagttgcccaggctggagtgcagttggtgcagtctccgctcactgcaaactctgcctcccgggttcaagcgattttgcagtctcagcctcccaagtagctggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069609 164 + 59248254 actacagacaggcacacgccaccacgcccggctaattttacttttgatacggagtcttgctcagttgcccaggctggagtgcagttggtgcagtttccgctcactgcaaactctgcctcccgggttcaagcgattttccagtctcagcctcccaagtagctggg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46877469 164 + 50890351 actacagacaggcacacgccaccacatccggcTAAttttacttttgatacggagtctcgctcagttgcccaggctggagtgcagttggtgcagtctccactcactgcaaactctgcctccctggttcaagcgattttccagtctcagcctcccaagtagctggg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e calJac3.chr22 45462812 0 + 49145316 C e papAnu2.chr19 47170785 1331 + 51301725 M a score=600142.000000 s hg38.chr19_GL949748v2_alt 177303 279 + 1064304 atcacaggc-----atgggccaccaagcctggctaattttctattattagtggagatgggttttcaccatgttgtccaggctggtGCTTGTTTTTTtaagctggtcaaggacatttaggtggtatttagcaaaggcctgaacaggagagaacctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCACATAGACTTAGGCTTACtttactaattgtggtgaaatacacattaaattgaaaatgtaccatcttaaccatc s panTro4.chr19 59109999 279 + 63644993 atcacaggc-----atgggccaccaagcctggctaattttctattattagtggagatgggttttcaccatgttgtccaggctggtGCTTGttttattaagctggtcaaggacatttaggtggtatttagcaaaggcctgaacaggagagaatctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCACGTAGACTTAGGCTTACtttactaattgtggtgaaatatacattaacttgaaagtgtaccatcttaaccatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987378 279 + 60714840 atcacaggc-----atgcgccaccaaacctggcTAAttttgtattatgagtggagacgggttttcaccatgttgcccaggctggtgcttgttttattaagctggtCAAGGACATTTaggtggtatttagcaaaggcctgaacaggagagaatctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCGCATAGACTTAGGCTTACTTTACTAATTGTGGTGAAATATATATTAACTTGAAAATGTGCCATCTTAACCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757075 276 - 106955855 atcacaggc-----atgcgccaccaagcctggcTAAttttgtattattagtggagacgggttttcaccatgttgcccaggctggtGCTTGTTTTATTAAGCTGGTCAAGGACATTTAGGTGGTATTTAGCAAAGGCCTGAA---GAGAGAATCTGTAAAATGTTTCAGGGAACAGCATTTCAGGTGATGGCTTTAGGAGGGCACGCAGATCGCATGGACTTAGGCTTACTTTACGAATTGCGGCGAAATATACATTAACTTGAAAATGTACCATCTTAATCGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044244 284 + 64156825 atcacaggctaataatgcaccaccacgcccggctaattttgtattattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTAGATGGCATTGAGCAAAGGCCTGAACAGGAGAGAATCTGTAAAATGTCTCAGGGAACAGCATTTCAGGTGATGACTTTAGAAGGGCATGCAGATCATATAGATTTAGGCTTGCTTTACTAATTGTGGTGGAACAGACATTAACATGAAAGTTGATCATGTTAACCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069773 284 + 59248254 atcacaggctaataatgcaccaccacgcccggctaattttgtattattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTagatggcattgagcaaaggcctgaacaggagagaatctgtgaaatgtctcagggaacagcatttcaggTGATGACTTTAGAAGGGCATGCAGATCATATAGACTTAGGCTTGCTTTACTAATCGTGGTGGAACAGACATTAACATGAAAGTTGATCATGTTAACCATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46877633 278 + 50890351 atcacaggc---taatgcaccaccacgcccagctaattttg---tattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTAGATGGCATTGAGCAAAGGCCTGAACAGGAGAGAATATGTAAAATGTCTCAGGGAACAGCATTTCAGGTGATGACTTTAGAAGGGCATGCAGATCATATAGACTTAGGCTTACTTTACTAATTGTGGTGGAACAGACATTAACATGAAAGTTGATCATCTTAACCATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462812 279 + 49145316 atcacagtc-----atgcgccaccatgcagggctaattttgtatttttagtagagaccaggtttccccatgtgggccaggctggtGCTTGCTTTATTAAGCTGGTCAAGGACGTTTAGGTAGCATTAAGCAAAGGCCTGAACAGGAGAGAATCTGTTAAATGTCTCAGGGGACAGCATTTCAGTTGATGACTTGGGAGGGGTATGCAGGTCATACAGACTTCGGCTTACTTTACTAACTGTGGTGAAATAGACGTTAAGATGAAAATCTGTCGTCTTAACCATT i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=233549.000000 s hg38.chr19_GL949748v2_alt 177582 82 + 1064304 ttG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTTGTA s panTro4.chr19 59110278 82 + 63644993 ttG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987657 82 + 60714840 TTG---TTTTAAAATCTGCTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757351 80 - 106955855 TTG---TTTGAAAGTCTACTCTGAGATGC--TGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCGAGATTGGCGTTAGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044528 82 + 64156825 TTG---TTTTAAAATTTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACGGCAGATTGGCGTGACCAAGATTGGCATTAGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070057 82 + 59248254 TTG---TTTTAAAATTTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACGGCAGATTGGCATGACCAAGATTGGCATTAGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172117 82 + 51301725 TTG---TTTTAAAATCTACTCTGAGATGCAGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i papAnu2.chr19 M 1331 C 0 s chlSab2.chr6 46877911 82 + 50890351 TTG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463091 85 + 49145316 TAGGATCTTGAGCTTCTGCTCTGAGACGCGGTGTTGCTGGAGTGCTTTCTACAGCAGACTGGCACCCCTGAGACGGACATTAGTA i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I a score=531398.000000 s hg38.chr19_GL949748v2_alt 177664 194 + 1064304 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-GGCAT--GAGAGTGGTCATCCATGTTAGGCGTTGAGAAAGTCCTGGCGCATGTTTAGCTACAGATTATCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt s panTro4.chr19 59110360 194 + 63644993 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-GGCAT--GAGAGTGGTCATCCATGTTAGGCGTTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTGTCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987739 195 + 60714840 TATTCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACGCCTGAGCCCTGACTGTTGTGGCAT--GAGAGTGGTCGTCCATATTAGGTGTTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTATCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757431 194 - 106955855 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGACTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-AGCAT--GAGAGGGGTCATCCATATTAGGCATTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTATCACAGTTTGT-CCCAGGTTTGCAGATGTTAGAAGC------------------tt--tttttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044610 210 + 64156825 TTTCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGAC--TGA-GGCAT--GAGAGTGGTCATCCACGTTAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCCGGGCTTGCAGATGTTAGAAGCtttttttttttttttttttt--ttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070139 206 + 59248254 TTTCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGAC--TGA-GGCAT--GAGAGTGGTCATCCACGTTAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCCGGGCTTGCAGATGTTAGAAGC----TTTTTTTTTTTttttt--ttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172199 198 + 51301725 TATTCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAATCAGTCTCTGCACCTGAGCCCTGACTGTGA-GGCAT--GAGAGTGGCCATCCATAGGAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGACCCCGGGCTTGCAGATgttagaagc---------------ttttt--ttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46877993 208 + 50890351 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCGTGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGACTGTGA-GGCAT--GAGAGTGGTCATCCATATTAGGCATTGAGAAAGTCCCGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCTGGGCTTGCAGATGTTAGAAGC----CTTTTTTTTTTttttt--ttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463176 193 + 49145316 TATCCTGAGACGCTGCATT-TGCCTGCGCTTGGGTAGTCATGATTTATGGTGAAGAGCAGAGTCTGCACCTGAGCCCTGACTGTTA-GGCGTCAGAGAGCGGTTGTCCATATTGGACAT------------GGAGCGTGCTTAGCCACAGATTATCACAG--TGC-CCCAGGCCTGCGGATGTTACAAGC-------TTTCTtttctttt--ctttttt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102990464 121 + 122678785 TATCCT--GATGTTGCTTTGGGCCTGAGCTTAGGGAATCTTGGTTTATGGTGAAAGGCAG-----------GAG-------------GGGCT--GGGAATA-----------------------------------ATGCCTGGT---------------TTTTT-CCTGAGTTTTCAAA-GTTACTAGT------------------TTGATTTCTTT i canFam3.chr1 I 483 I 110 e mm10.chr7 3704779 907 + 145441459 I a score=374450.000000 s hg38.chr19_GL949748v2_alt 177858 147 + 1064304 aaata--------ggcacaggatcttgcagtgttgacc-----aggatggtttccaactcctaacctcaagtgatccatccacctcagctttccaaagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG s panTro4.chr19 59110554 147 + 63644993 aaata--------ggcacaggatcttgcagtgttgccc-----aggatggtttccaactcctaacctcaagtgatccttccacctcagctttccatagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987934 147 + 60714840 aaata--------ggcataggatcttgcagtgttgccc-----agggtggtttccaactactgacctcaagtgatccttccgcctcaggtttccatagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCGATTTGTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757625 134 - 106955855 aaata--------ggcacaggatcttgcagtgttgccc-----aggatggtttccaactcctgacctcaagtgatcc-------------ttccatagtgctggggttacaggtgtaagccactgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044820 147 + 64156825 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccacctcagccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070345 147 + 59248254 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccacctcaaccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172397 130 + 51301725 aaaaaaaaaaaaNGGCACAGGATCTTGcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccgcctcagccttaAATAG-------------------------TGCACCTGaccctttcattctttttgtcaATTTGTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878201 147 + 50890351 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccgcctcagccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463369 134 + 49145316 aaata--------gggacaggatcttgcaatgttgcccaggataggatggtttccaactcctggcctca------------------gccttgcaaagtgctggaattacaggtgtaagccactgcaccagaccCTTTCACTCTTTTTCTTAGATTGTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102990585 110 + 122678785 I a score=1285342.000000 s hg38.chr19_GL949748v2_alt 178005 445 + 1064304 ACCCCGTTGATAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGGGGAGTGGGC--TATAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGGACATAGATCCTAATTGCAATGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGTTGTTCAGGTGAGTACACTTTCTAGTAAATGAAGCCATCTAGCCTAGTCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------AGCGAGATTCTGAGTCTC-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT s panTro4.chr19 59110701 445 + 63644993 ACCCCGTTGGCAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGGGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGGACATAGATCCTAATTGCAATGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGTTGTTCAGGTGAGTACGCTTTCTAGTAAATGAAGCCATCTAGCCTAGTCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------AGCGAGATTCTGAGTCTC-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988081 446 + 60714840 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGAGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGAATATAGATCCTAATTGCAGTGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGCTGTTAAGGTGAGTACACTTTCTAGTAAATGAAGCCATTTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTctttggtgtaatcctgccttgat------tcagatccagcctttcccactaagctgtgtgact------ggcgagattctgagtctcagtctgtT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757759 437 - 106955855 ACCCTGTTGACAATCTCATGAACGTGCTGGAGATCCCTCCCCCATGGATACCGATGCT-GGGTGGGAGTTCATCCCAGAGTTCTGTGGGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGAC-TTCTAGATATAGATCCTAATTGCAATGAAACTT--AGTCATGTGGGAAAGCGGTGCAGATGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGCTGTTCAGGTGAGTACACTTTCTAGTAAATGAAGCCATCTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------GGCGAGAT--TGAGTCTT-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGT---T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044967 441 + 64156825 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCCGAATATAGAGCCTAATCGCAATGAAACTT--AGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACA------GGCGAGATTCTGAGTCTC-ATCTGGTA-AAAGACTG--------AACAGCCCGCTAACATTTGGCTGGCAGT---T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070492 441 + 59248254 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCCGAATATAGAGCCTAATCGCAATGAAACTT--AGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACA------GGCGAGATTCTGAGTCTC-ATCTGGTA-AAAGACTG--------AACAGCCCGCTAACATTTGGCTGGCAGT---T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172527 440 + 51301725 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCTGAATATAGAGCCTAATCGAAATGAAACTT--AGTCATGTGAGAGAGCGGTGCAGGTGTCAGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACT------GGCGAGATTCGGAGTCTC-ATCTGTTA-AAAGACTG--------AACAG-CCGCAAACATTTGGCTGGCAGT---T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878348 437 + 50890351 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCTGAATATAGAGCCTAATCGCAATGAAACTT--AGTCACGTGAGAACGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTATACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA--------TTGCTCTTTGGTGTAATCCCGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACT------GGCGAGATTCTGAGTCTC-ATCTGTTA-AAAGACTG--------AACAG-CCGCTAACATTTGGCTGGCAGT---T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463503 445 + 49145316 CCCCCTTTGACAATTTCATGAAAGTGCTGGAGTTGCC-AGCCCAAGGTTACTAATAATCGGATGGGAGTTTATCCCAGAGTCCTGTGGCAAGTGGGCTATACAGCTGGTTCTGGTTTTAGGGAGGACTTTGTTCATATAGAGCCTAATAGCAATGAAATTT--AGTCATGTGAGAA-GCGGTGTAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGGAGAAGTGAA--AGATCCCAAGGGGCAGACAGCTCTTTAGGTTGGTACACTTTCTAGTAAGTGAAGCCATCTAGCCTAGCCAGGGGCAGGAAGGGAGGAG-CTTTGA-----TGTTTGCTCTTTGGTGTAGTCGTGCCTTGAT------TCAGATCCAGCATTTCCCACTAA--CGTGTGACT------AGCAAGAT-CTGAGTCTC-ATCTGTTAGAAAGATTG--------AACAG-CTGTTAACGTTTGGCTGACAGTTAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102990695 419 + 122678785 ACCCAGTT---------CTGAAAATTCAGGAATCCCCTCCCCT----ATCCCACAGCT-AGTTGAAAGTGGA----GGAACTTTGTGAAGA--------TAGAGCTAGGTCAGGTCCTTGGTTGGA---------------------------TAAGCATT--CGTGTGGTGGGGTTGAGCAGCAGGTAACCCAGGAGTACTTGTGGTTCCCTGTGGCAGAAGAGGAGTGAGTTACAGGAGGTAGGCAGCACCACAGGTT-GTAGGCTTTCAAGTAAATAAGGCATTTAACTCCA---AGGGACAAGAA-GGAGGAACCCTGGAAGCTCTGCCAGTCTATTGGAGAGGTGTCTCACTCATAGAGCCTGGGGTCCAATCCATCCCACCGAGGCCTATGACTTTGGGCAGAAAACTTCTCTG-CTT-GCCTGTTCAAGAGACTGACTCTTAAACCAA-CAGCCAACATGTGGCAGAGGGTTCAT i canFam3.chr1 I 110 I 30 e mm10.chr7 3704779 907 + 145441459 I a score=485882.000000 s hg38.chr19_GL949748v2_alt 178450 190 + 1064304 AATCAACAGATAGAggccaggcgtggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcaggagacctcaagtcagagaccagcctggccaacgtggtgaaattccatctctacgaaaaatacaaaaattagccgagcatggtggtgt--gcctataatcccagc s panTro4.chr19 59111146 182 + 63644993 AATCAACAGATAGAggccaggcgtggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agttcgagaccagcctggccaatgtggtgaaattccatctctacgaaaaatacaaaaattagccgagcatggtggtgt--gcctataatcccagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988527 182 + 60714840 AATCAACAGATAGAggccaggcgtggtggcttatgcctgtaaccccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agtttgagaccagcctggccaacatggtgaaattcgatctctacgaaaaatacaaaaattagccgggcatggtggtgt--gcctgtaatcccagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758196 182 - 106955855 AATCAACAGATAGAggcccggcgtagtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agttcgagaccaccctggccgacatggtgaaattccatctccacgaaaaatacaaaaattagccgggcatggtggtgt--gcctataatcccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045408 182 + 64156825 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatctcttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtgttgg--tcctgtaatcccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070933 182 + 59248254 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtggtgg--tcctgtaatcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172967 182 + 51301725 AACCAACAgatagaggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcccatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtggtgg--tcctgtaatcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878785 182 + 50890351 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagctgggcctggtggtgg--tcctgtaatcccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463948 135 + 49145316 AACCAAC----Agaggccgggc--------------------------------gggaga-------------atcacctgaggttaag--------agttcaagaccagcctggccaacatggtgaaaccccatctttactaaaagtacaaaaattagctggatgtggtggggggcgcctgtatttccagc i calJac3.chr22 C 0 I 19 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991114 30 + 122678785 I a score=209023.000000 s hg38.chr19_GL949748v2_alt 178640 132 + 1064304 tactcgggaggctgaggcaggagaattgattgaacctgggagacagagactgcagtgagccgagatccgcggcactgcac-------tgggtgacagcgagac-----------AC-AAAACAACACGAACTCCCCCCCCACCCCCCAGCA s panTro4.chr19 59111328 129 + 63644993 tactcgggaggctgaggcaggagaattgattgaacttgggagacggagattgcagtgagccaagatccgcgacactgcac-------tgggtgacagcgagac-----------AC-AAAACAACACGAACTCCCCCC---CCCCCCAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988709 132 + 60714840 tactcgggaggctgaggcaggagaattgattgaacctgggagacagagattgcagtgagccgagatccgcggcactgcac-------tgtgtgacagcgagac------tcaaaac-aaaaaaacacaaaCTACCC-----ACCTCCAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758378 126 - 106955855 tactcaggaggcagaggcaggagaattgattgaacctgggagatggcgattgcagtgagccaagatccgcggcactgcac-------tgggtgacagcgagac-----------tcaaaaaaaaCACGAATTTC-------CCCCTCAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045590 126 + 64156825 tactcgagaggctgaggcgggagaattgatcgaacctgggagacgga-----------------atccgcggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATT-C-------ACCCTCAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071115 126 + 59248254 tactcgagaggctgaggcgggagaattgatcgaacctgggagacgga-----------------atccgcggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATT-C-------ACCCTCAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47173149 127 + 51301725 tactcgggaggctgagacaggagaattgatcgaacctgggagacgga-----------------atcCCCggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaatcaggaatTCC-------ACCCTCAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878967 127 + 50890351 tactcgggaggcggaggcgggagaattgatcgaacctgggagacgga-----------------atccgcagcactgcactccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATTCC-------ACCCTCAGCA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991114 30 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I a score=74518.000000 s hg38.chr19_GL949748v2_alt 178772 30 + 1064304 CAACTGTGAAGAAATGTAGGAGTCATGTCC s panTro4.chr19 59111457 30 + 63644993 CAACTGTGAAGAAATGTAGGAGTCATGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988841 30 + 60714840 CAACTGTGAAGAAATGTAGGAGTCATGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758504 30 - 106955855 CAACTGTGAAGAAATGTAGGAGTCATGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045716 30 + 64156825 CAACTGTGAATAAATGTGGGAATCATGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071241 30 + 59248254 CAACTGTGAATAAATGTGGGAATCATGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47173276 30 + 51301725 CAACTGTGAATAAATGTAGAAATCATATCC i papAnu2.chr19 C 0 I 1499 s chlSab2.chr6 46879094 30 + 50890351 CAATTGTGAATAAATGTAGGAATCATGTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102991144 28 + 122678785 cagccgtaaagaaact--ggtattgcatcc i canFam3.chr1 I 30 C 0 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I a score=502350.000000 s hg38.chr19_GL949748v2_alt 178802 270 + 1064304 ATTTTTCAGATCAGAAATGAAGGCATTGTAATACCTAACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGTGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--TCTCCTGTTCTTTTTCAGGAGATAGATGGTTCAATA s panTro4.chr19 59111487 270 + 63644993 ATTTTTCAGATAAGAAATGAAGGCATTGTAATACCTGACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGCGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--TCTCCTGTTCTTTTTCAGGAGATAGATGGTTTAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988871 270 + 60714840 ATTTTTCAGATCAGAAATGAAGGCATTGTAATACCTAACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTTTCTTGGTGCATTGGCCCAGCGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGATGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--CCTCCTGTTCTTTTTCAGGAGATAGATGGTTTAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758534 270 - 106955855 ATTTTTCAGATCAGAAAGGAAGGCGTTGTAATACCTAATTGCTTTGTAT---GAGGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTACAGTATTTTAAATTCTCCTGGCGCATTGGCCCAGTGGCGC-------------CTCAGCAGCAGGACATGCTTTTGTTGCAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTACT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--CTTCGTGTTCTTTTTCAGGAGATAGATGGTTTAATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045746 276 + 64156825 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTTGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTCGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGGTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTC---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAGGAGATAGATGGGTTAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071271 276 + 59248254 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTTGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTCGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGGTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTC---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAGGAGATAGATGGGTTAATA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46879124 272 + 50890351 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTCGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGATTTTGTTGAAGGTGTAAGGTTTAT----GGTGCTGTTGAAAACTGTT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAG----TAGATGGGTTAATA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102991172 288 + 122678785 gtttttcagatcagaaactgaagtacTTGAGT-------TGCCTTGTGTCATGATGACAGGGAAAGACGTATGCGTCTGAGAATTGTCCTCATTGCTTTTACGTTTGTAAAATGTCCTGATTCTTGTT------TTGGCCAAACGGAGCCCACGTGATCT--TTCAGTGGTTGGACATACTCCTGTTGAAGATGCAAAGTTTATTCAGTGTGC-ATTGAAAATTATTTTAGTTCTTATATGTAGATAAGGCTGT-TCTGGTGTTGATGGGATGCTGGCTTTCCTCAGTGTGTAGGTGGTTTAATA i canFam3.chr1 C 0 I 1810 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I e papAnu2.chr19 47173306 1499 + 51301725 I a score=1281984.000000 s hg38.chr19_GL949748v2_alt 179072 763 + 1064304 AATGTGGGCctgagtgcagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggcggatcacccgaggtcgggagtttgagactagcctgaccaaagtggagaaaccccttagtctctactgaaaa-aatacaaaattagcggggcgtggtggcgcatgcctgtaatcccaggctgaggcaggagaatcccaggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacgagagcgaaactctg---------------------------------tctcaaaaaTGATAATAAATGTGAAACAT--TTTTTTAAAATCATGCCTTTGTTTTGCCTAATGGTGACgatctca---ctttgtctcccgggctggagcacagtggcatggtcgtggctcactgcagcctggacctcctgtgcttaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtaccaccatgcccagctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactgtgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatattgggtttataggcCAGGCATAAGGGACTGTGCGTGGCttaagtttccattttctaatgtaaagacaaaaaggcgtgaagtgtccaaagaggtaaatgatcccaaactcattttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaatatcctctgatg s panTro4.chr19 59111757 763 + 63644993 AATGTGGGCctgagtgcagtggctcatgcctgtaatcccagcactttgagaggccaaggcaggcggatcacctgaggtcgggagtttgagactagcctgaccaaagtggagaaaccccctagtctctactgaaaa-aatacaaaattagcggggcgtggtggtgcatacctgtaatcccaggctgaggcaggagaatcccgggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaactctg---------------------------------tctcaaaaaTGATAATAAATGTGAAACAT--TTTTTTAAAATCATGCCTTTGTTTTGCCTAATGGTGACgatctca---ctttgtctcccgggctggagcacagtggcatggtcgtggctcactgcagcctggacctcctgtgcttaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtaccaccatgcccggctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactatgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaattattgggtttataggcCAGGCATAAGGGACTGTGCGTGGCTTAAGTTTCCATTTTCTAATGTAAAGACAAAAAGGCGTGAAGTGTCCAAAGAGGTAAATGATCCCAGACTCATTTTCATCACCTTTTGGACGTGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989141 754 + 60714840 AATGTGggccag-gtgcagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggtggatcacctgaggtcgggagtttgagactagcctgaccaaagtggagaagcgccctagtctctactgaaaa-aatacaaaattagctgggcgtggtggcacatgcctgtaatcccaggctgaggcaggagaatcccgggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagggaaa--ctg---------------------------------tctcaaaaatgataataaaTGTGAAACA---TTTTTTAAAATCATG-CTTTGTTTTGCCTAATGATGATgatctca---ctttgtctcccaggctggagcacagtggcatggtcgtgggtcactgcaacctgga----ctgtgcttaagtgatcctcctcagctctagtagctgggaccgcaatccaccatgtaccaccatgcctggctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactatgttgccaaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatactgggtttataggccaggcataagatactgtgcctggctGAAGTTTCTATTTTCTAATGTAAAGACAGAAAGGCGTGAAGTGTCCAAAGAGGTAAATGATCCCGAACTCATTTTCATCACCTTTTGGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758804 760 - 106955855 AATGTGggccgg-gtgcagtggctcacgcctgtaatcccagcactttgggaggcagaggcaggcggatcacctgaggtc-ggagtttgagactagcctgaccaaagtggagaaaccccctag--tctactaaaaa-aatacaaaattagccgggcgtggtggcgcatgcctgtaatcccaggctaaggcaaggcaatcccgggaggcggagtttgcagtgagccgagatcacaccattgcactccagcctgggcagcaagagcgaagctctg---------------------------------tctcaaaaaTGATGATAAATGTGAAACAC-ATTTTTAAAAATCATGCCTTTGTTGTGCCTAATGGTGATgatctca---ctttgtctcccaggccagagcacagtggcgtggtcgtggctcactgcagcctggacctcctgtgcctaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtatcaccatgcctggctaatttagttttac--ttttttgtttgttttcgtacaaatgcggtctcactatgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatactgggttgataggccaggcataaggtactgtgcctggcTGAAGTTTCTATTTTCTAATGTAAAGACAAAAAGGTGTGAAGTGTCCAAAGAGGTAAATGATCCCAAACTCATTTTCATTGCCTTTTCGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046022 793 + 64156825 AATGTGggtcgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcaggagttcaagcccagcctgaacgacgtggagaaaccccctagtctctactaaaaacaatacaaaattagccggccatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcagagtttgcagtgagccgagatca--ccattgtactccagcccgggcaac--gagggaaactccgtctgaaaaaTGATTGGCAACGAGGGAAACTCCATCTGAAAAATGATAATAAATGTGAAACACTTTCTTTTTAAATCATGGCTTTATTTTGCGTAATGGTGATgatctca---ctttgtctcccaggctggagcacagtggcatggttgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgcctggctaatttagttttcc--tttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggactcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTCTAATGTAAACACAAAAAGGCATGAAGTGTCCAAGGAGGTAAATGATCCCAAACTCGTTTTCATTGCCTTTTGGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAAAATTCTCTGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071547 760 + 59248254 AATGTGggttgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaacaacgtggagaaaccccctagtctctactaaaaacaatacagaattagccggccatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcagagtttgcagtgagccgagatca--ccattgtactccagcccgggcaac--gagggaaactccg---------------------------------tctgaaaaaTGATAATAAATGTGAAACACTTTCTTTTTAAATCATGGCTTTATTTTGCGTAATGGTGATgatctca---ctttgtctcccaggctggagcacagtggcatggtcgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgcctggctaatttagttttcc--tttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggactcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTctaatgtaaacacaaaaaggcatgaagtgtccaaggaggtaaatgatcccaaactcgttttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaaaattctctgatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46879396 765 + 50890351 AATGTGggtcgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaacaacgtggagaaaccccctagtctctactaaaaaaagtacaaaattagccaggcatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcggaatttgcagtgagccgagatca--ccattgtactccagcctgggcaac--gagggaaaatccg---------------------------------tctgaaaaatgataataaaTGTGAAACACTTTCTTTTCAAATCATGGCTTTATTTTGCCTAATGGTGATGTCTCCAAcgctttgtctcctaggctggagcacagtggcatggtcgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgactggctaatttagttttcccttttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggatgcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTctaatgtaaacacaaaaaggcatgaagtgtccaaggaggtaaatgatcccaaactcgttttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaaaatcctctgatg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991460 1810 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I e papAnu2.chr19 47173306 1499 + 51301725 I a score=18134.000000 s hg38.chr19_GL949748v2_alt 179835 14 + 1064304 ttga--gtta----aaaaag s panTro4.chr19 59112520 16 + 63644993 TTGAGTGTTA----AAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989895 16 + 60714840 TTGAGTGTTA----AAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102759564 16 - 106955855 TTGAGTGTTA----AAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046815 18 + 64156825 TTGAGCATTAAA--AAAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55072307 18 + 59248254 ttgagcattaaa--aaagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47174805 13 + 51301725 -------ttaaaataaaaaa i papAnu2.chr19 I 1499 C 0 s chlSab2.chr6 46880161 18 + 50890351 ttgagcattaaa--aaagag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991460 1810 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I a score=1677080.000000 s hg38.chr19_GL949748v2_alt 179849 736 + 1064304 aacaaaaattgaagccatagtatgacataggatgctggaaatgcacacagctggtgtt--tccattttgat----tctccctacctgtaactgctccctacTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTAGATCTATTTATGAAAGCTTGCTTGAATGGTTTGCTGTAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGGTTGAGGTGTTTACCCCA--GTCAAGGGGCAGTTGATTTGCTGAAGGCGTGTGGGATTATAGCAGTGAGCGGGAGCCTAGGGGATGGCGTTTGCCCCCAGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGCCGTCCTGAGCCTGGGGTTGGAAGAAAGGTGTAGTAG--GGCATCTGTTGGAT-ATTTTATGCAGTGC----ATTGTTAGGTTATATACATACTAGATCTATTTTTGGTGGAAAATTTTGTACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTCTCTC---CTTAAAAGATGTAGATACTGC--------TATTTATGGCAC--GGAATGTGATTCAATCTCACATCTGCTTAATCAGAA----GAGCTTTCTGGGCT-GAGGATATGAACTCTTCAGC s panTro4.chr19 59112536 738 + 63644993 AACAAAAATTGAAGCCATAGTATGACATAGGATGCTGGAAATGCACACAGCTGGTGTT--TCCATTTTGAT----TCCCTCTACCTGTAACTGCTCCCTACTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATATGGATCTATTTATGAAAGCTTGCATGAATGGTTTGCTGTAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGGTTGAGGTGTTTACCCCA--GTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGCGGGAGCCTAGGGGATGGCGTTTGCCCCCAGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTAGACAGGGTAAGGAGCAAGCCATCCTGAGCCTGGGGTTGGAAGAAAGGTGTAGTAGCTGGCATCTGTTGGAT-ATTTTATGCAGTGC----ATTCTTAGGTTATATACATACTAGATATATTTTTGGTGGAAAATTTCGTACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAACTCTAGTGTTAGAAATTACTTTTCTCTC---CTTAAAAGGTGTAGATACTGC--------TATTTATGGCAC--GGAATGTGATTCAGTCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGGCT-GAGGATATGAACTCTTCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989911 742 + 60714840 AACAAAAATTGAAGCCATAGTATGACATAAGATGCTGGAAATGTACACAGCTGGTGTT--TCCATTTTGAT----TCTCCCTACCTGTAACTGCTCCTTACTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTGGATCTATTTATGAAAACTTGCTTGAATGGTTTGCTATAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCCGAACGCGTATGGGATTATAGCAGTGAGCGGGAGCCTAGGGGAAGGCGTTTGCCCCCAGGGCCCTGTGGCTGTGGGCAAGGGCAGT---CCAGAGTTATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGTTGCAAGTCGTCCTGAGCCTGGGGTTGGAAGAAAGGTATAGTAGCTGACATCTGTTGCAT-ATTTTTTGCAGTGC----ATTGTTAGGTTATATACATACTAGATATATTTTTGGTGCAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTGTCTC---CTTAAAAGGTGTAGATACTGC--------TA-TTATGGCACAGGGAATGTGATTGAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-GAGGATATGAACTCTTAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102759580 742 - 106955855 AACAAAAATTGAAGCCATAGTATGACATAGGTTGCTGGAAATGTACACGGCTGGTGTT--TCCATTTTGAT----TCTCCCTACCTGTAACTGCTCCCTACTGGGAAGAC--T--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAAC--TGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTGGATCTATTTATGAAAGCTTGCTTGAATGGTTTGCTATAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAATGAGTGGGAGCCCAGGGGAAGGCGTTTGTCCCCGGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCACGGCTTTGGACAGGGTAAGGAGCAAGCCGTCCTGAGCCT-GGGTTGGAAGAAAGGT---GTAGCTGACATATGTTGGAT-ATTTTATGCAGTGCATTGATTGTTACGTTATATACATACTATATATATTTTTGGTGGAAAATTTCATACAGAATAGTAAAATAAATGACATGTACTTAAC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTCTCTT---CCTAAAAGGTGTAGATACTGC--------TATTTATGGCACAGGGAATGTGATTTAATCTCGCATCTGGTTAATCAGAAGAGCGAGCTTTCTGGACT-GAGGGGATGAACTCTTAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046833 729 + 64156825 AACAAAAATTGAAGCCATAGTATGACACAGGATGCTGGAAAGGTACACAGCTGGTGTT--TCCATTTTGATTCTATCTCCCTACCTGTAACTGCTCCCTATTGGGAAGACTTT--GGGTCCTCAC--AGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTAACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTACGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGACATTTGCCTTGAC--------GGAGGTGGGCAGGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTTGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTATAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55072325 729 + 59248254 aacaaaaattgaagccatagtatgacacaggatgctggaaaggtacacagctggtgtt--tccattttgattctatctccctacctgtaactgctccctATTGGGAAGACTTT--GGGTCCTCAC--AGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTAACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTACGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGACATTTGCCTTGAC--------GGAGGTGGGCAGGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTTGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47174818 731 + 51301725 aaaaaaaattgaagccatAGTATGACACAGGATGCTGGAAAGGTACACAGCTGGTGTT--TCCATTTTGATTCTATCTCCCTACCTGTAACTGCTCCCTATTGGGAAGACTTT--GGGTCCTCACAAAGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTGACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTGATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGGCATTTGCCTTGAG--------GGAAGTGGGCAAGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTCGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATacatattgtgtatatttttagtggaaaatTTCATACAGAATAGTAAAATGAATGACATGTGCTTAGC----TGGAAAAATTCTAGtgttagaaatttcttttctctc---cctaaaAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880179 729 + 50890351 aacaaaaattgaagccatagtatgacacaggatgctggaaaggtatacagctggtgtt--tccattttga---aatctccctacctgtaactgctccctgTTGGGAAGACTTT--GGGTCCTCACAAAGTCAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGTAACAACAGTGCCAGGAATATCAGAAGTGCCTGATGAATGTGGGTCTATTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGACACTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGGCATTTGCCTTGAG--------GGAGGTGGGCAAGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTCGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTGGC----TGAAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTTAACC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102993270 643 + 122678785 AAAAAAAAT----GCCATGTTACAATTTGGGGTATTGGGAA-------AGATAGTGTTTCTCCATTTTGATCCTATCTCTTTTCCATTAAGTG--------TGCTAAGACTTTCAGTGTCTTCATAAAGTCCTGCAGCTTTCCTTG------CGGGCAAGAGGT---CACGATGCAGAGAATATTGGAAATGACCAAT-AATATGG-------------AGCTTGCTTGAATAG-----------AAATAATGGTTACTTCATAACATCCTCTTTAAGGGAAA---GCAGGGGGGAAAGGGTTGGGCCTTTACCCCA-TGACAAGGT---GTTGATTTGCT--ATGAGTCTGTGGTAATCCCAGTGAGTATGAGCTCTGGGCCAGG-GTTTGCCCCCAGGGTCCT------------AAGGGCAGTCCCCCATGG-AGCCATCT-GGAGCCAT-----------GGACACATAGCAGGGCCTCCTGTGCCTGG------------GG---------------CTGCTGGGTCACTTCTTGCCATGC----ATTGTTAA---AACCACATG----ATAATTTTTTAGTGGAAAACCACAGGTAAAATAGTAAATCGAGTAACAGATACTCAAACACGTGG-------CCAGTTTGGGA-------TTTTTCTCAGGCCTAGAAA--CTAGGTACTGACAGTCTAGTATTATTGGTAAGGAGGGTGGTGTTTAGCCTCAGATCTGACTAGT----A----GGGCTTTTTTGACTGCAGCGGGTTAGCCCTTGACC i canFam3.chr1 I 1810 C 0 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I a score=241835.000000 s hg38.chr19_GL949748v2_alt 180585 83 + 1064304 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGCAGCTGCATTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGGTGATTT s panTro4.chr19 59113274 83 + 63644993 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGTAGCTGCATTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990653 82 + 60714840 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGTAGCTGCATTTGGTC-TTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760322 83 - 106955855 ACTGTGCTTTGTT-GCGGTG-GTAGTGGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCCTGTAAGGAGATGATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60047562 84 + 64156825 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073054 84 + 59248254 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175549 84 + 51301725 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGACTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880908 82 + 50890351 AC--TGCTTTGTTAACAGTG-GTGGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464102 80 + 49145316 ACTGTGCTTTGTC-AGGGTG-GGAGGAGCTTAATCGCAGCTGCACTTGCTCTTTTGCAG-----ACTGAGTCGTTGTAAGGAAATCT--- i calJac3.chr22 I 19 C 0 s canFam3.chr1 102993913 82 + 122678785 ATTATG---TGTC-ACTGTGAGTAATGGTTTAGCAACAGCAGCA----GAGTTTTACAGGGGTTACTAAGTCCTTTTGCAGGGATTGTGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I a score=178787.000000 s hg38.chr19_GL949748v2_alt 180668 120 + 1064304 CCTTTACTCTTGCTAAGAATGTGGAGCGAGGGATG-TATGCTC-----TCAGATGAGGAGGCAGGTGTATTTTGCCCTCCTGTCATCTG-CAGTTTACTATGAATGATGACCTGACAACCATAGGGT s panTro4.chr19 59113357 63 + 63644993 CCTTTACTCTTGCTAAGAATGTGGAGCGAGGGATGTTATGCTC-----TCAGA-----------------------------------------------------------TGACAGCCATAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990735 121 + 60714840 CCTTTAGTCTTTCTAAGAATGTGGAGCGAGGGATGTTACATTC-----TCAGATGGGGAGGCAGGTGTATTTTGCCCTCCTGTCAGCTG-CAGTTTACTATGGATGATGACCTGACAACCATAGGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047646 122 + 64156825 CCTTTACTGTTGTTAAGAATGTGGAGCGAGGGATGTGACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CACGTTACTATGGATGATGGCCTGACACCCATAGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073138 122 + 59248254 CCTTTACTGTTGTTAAGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CACGTTACTATGGATGATGGCCTGACACCCATAGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175633 122 + 51301725 CCTTTACTGTTGCTAAGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTTCTATCACCTG-CAGGTTACTATGGATGATGGCCTGACACCCATAgggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880990 122 + 50890351 CCTTTACTGTTGCTACGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CAGGTTACTATGGATGATGGCCTGACACCCATAGGGT i chlSab2.chr6 C 0 I 38 s calJac3.chr22 45464182 99 + 49145316 CATTTACTCTTGCTAAGAATGTGGAGCAAAGGATGTTACATTT-----TCGGGTGTA-------------TTTGCCCTCCTGTCTCCTGCCAGGTTACTATGGA--------TGATAGCCATAGG-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102993995 106 + 122678785 -CATTTCTCTC-CTGACAATTC----CAGGGAAGGTTCTACTCCTTTTTCAGATGAGAGCAGAGGTGTGTGTGGTCACCTGCCCTCCTT----GGTAAGATGGGTA------TGATCATTAT----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C a score=-1423.000000 s hg38.chr19_GL949748v2_alt 180788 12 + 1064304 AGTTTGG-ttttt s panTro4.chr19 59113420 12 + 63644993 AGTTTGG-ttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990856 11 + 60714840 AGtttgt-tttt- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047768 7 + 64156825 -----GG-Ttgtg i rheMac3.chr19 C 0 I 24 s macFas5.chr19 55073260 8 + 59248254 -----GGTTtgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47175755 7 + 51301725 -----gg-ttttg i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45464281 9 + 49145316 ---CTGG-ttttt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994101 10 + 122678785 GATTTGC-CTT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I a score=1260.000000 s hg38.chr19_GL949748v2_alt 180800 15 + 1064304 tgtattgttttgttt s panTro4.chr19 59113432 15 + 63644993 tgtattgtttcgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990867 11 + 60714840 ----ttgttttgttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55073272 15 + 59248254 tgtgtgtgtgtgtgt i macFas5.chr19 I 4 I 7 s papAnu2.chr19 47175764 15 + 51301725 tgtgtgtgtgtgtgt i papAnu2.chr19 I 2 I 7 s calJac3.chr22 45464290 5 + 49145316 ----------tgtgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994111 8 + 122678785 -----TGGATTGT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I e rheMac3.chr19 60047775 24 + 64156825 I a score=9133.000000 s hg38.chr19_GL949748v2_alt 180815 5 + 1064304 tgtga s panTro4.chr19 59113447 5 + 63644993 tgtga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990878 5 + 60714840 tgtga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047799 5 + 64156825 tgaga i rheMac3.chr19 I 24 C 0 s macFas5.chr19 55073294 5 + 59248254 tgaga i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47175786 5 + 51301725 tgtga i papAnu2.chr19 I 7 C 0 s calJac3.chr22 45464295 4 + 49145316 -gtga i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994119 4 + 122678785 -GTGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I a score=393117.000000 s hg38.chr19_GL949748v2_alt 180820 193 + 1064304 cagggcctcactc-tgtcgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctgggttcaagcagttttccttcctcagcctcctgaatagctgggattacaggcagtgcgccaacggcctggctaatttttcgtaatcttagtggagacgggctttcgccatgttggccgggct s panTro4.chr19 59113452 193 + 63644993 cagggcctcactc-tgtcgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctgggttcaagcagttttccttcctcagcctcctgaatagctgggattacaggcagtgcgccaacggcctggctaatttttcgtaatcttagtggagacgggctttcgccatgttggctgggct i panTro4.chr19 C 0 I 14 s ponAbe2.chr19 55990883 193 + 60714840 cagggtctcactc-tgttgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctggattcaagcagttttccttcctcagcctcctgaatagccgggattacaggcagtgcgccaacagcctggctaatttttcgtaatcttggtggagacggggtttcgccatgttggccaggcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047804 193 + 64156825 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctaaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073299 193 + 59248254 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctaaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175791 193 + 51301725 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctgaatagctgggattacgggcagtGTGCCaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881150 193 + 50890351 caggatctcactc-tgtgtcccaggctggagagcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctgaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i chlSab2.chr6 I 38 C 0 s calJac3.chr22 45464299 187 + 49145316 caaggtttcactcttgtcatccaggctggagtgcagtggctccatctcaggtcacagcaacctctgcctgc-gggttaaagtgattttcctacctcagcctcctgaatagctgggattacaggca-tacaccaacagcctggctcattatttgtatttttagtagacctggggtttcgccatgttgccc----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994123 52 + 122678785 ---------------------------GGACCGCAGAGGTTACAC------------------------------------------------------------AGTGGCTGC------------TATGTTAA----------AATCTTTTAT--------------CAGAATT------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C a score=14689.000000 s hg38.chr19_GL949748v2_alt 181013 18 + 1064304 ggtctctcaaactcctga s ponAbe2.chr19 55991076 18 + 60714840 ggtctctcaaactcctga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047997 16 + 64156825 gg--tctcaaactcccgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073492 16 + 59248254 gg--tctcaaactcccga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175984 16 + 51301725 gg--tctcaaactcccaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881343 16 + 50890351 gg--tctcaaactcctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464486 8 + 49145316 ----------actcctga i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994175 9 + 122678785 ---------GGTTCTTAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e panTro4.chr19 59113645 14 + 63644993 I a score=179010.000000 s hg38.chr19_GL949748v2_alt 181031 107 + 1064304 cctcaagtgatccgtctcggactcccgaagtgctgggattacaggtgtgagccaccactcccagccCGTAGGGTGGTTTTGACAGTGACATGGGTCACGGTGA-TGGC s ponAbe2.chr19 55991094 108 + 60714840 cctcaagtgatctgtctcgggctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccCGGAGGGTGGTTTTCACAGTGACATGGCTcacagtgactggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760405 102 - 106955855 cctcacgtgatccgt------ctcccagagtgctgggattacaggtgtgagccaccacgcccagccCATAGGGTGGTTTTGACAGTGACATGGGTCACGGTGACTGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048013 108 + 64156825 cctcaagtgatccatctcacactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATATGGGTCACAGTGACTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073508 108 + 59248254 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATATGGGTCACAGTGACTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176000 108 + 51301725 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcatgagccaccacgcccagcccatagGATAGTTTTGACAGTGATACGGGTCACAGTGACTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881359 108 + 50890351 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATACGGGTCACAGTGACTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464494 60 + 49145316 ----------------------cctcaAAGTGTTGGGATTACAAGCATG--------------------------GTTTTGACGATGGCCTGGGTCACAGTGACTGGT i calJac3.chr22 C 0 I 27 s canFam3.chr1 102994184 33 + 122678785 ---------------------CTTC-----TGCTCGTATCACAG--------CTCCA----------------------TGATAATGGA------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e panTro4.chr19 59113645 14 + 63644993 I a score=165718.000000 s hg38.chr19_GL949748v2_alt 181138 69 + 1064304 GCT-GTACTACTTGTGCCTCACCGCCGCGGCATGGagctac-caagaggcggagccaggatttgaacccaa s panTro4.chr19 59113659 69 + 63644993 GCT-GTACTACTTGTGCCTCACCACCGCGGCATGGagctac-caagaggtggagccaggatttgaacccaa i panTro4.chr19 I 14 C 0 s ponAbe2.chr19 55991202 64 + 60714840 gct-gtactacttgtg-----ccaccgtgacgcggagctac-caagaggtggagccaggatttgaacccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760507 69 - 106955855 GCT-GTACTACCTGTGCCTCACCACCACGACATGGAGCTAC-CAAGAGGTGGAACAAGGATTTGAAGCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048121 70 + 64156825 GCTAATACTACCTGTGCCTCACCACCGTGACATGGagctac-gaagaggtggagccaggatttgaacccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073616 70 + 59248254 GCTAATACTACCTGTGCCTCACCACCGTGACATGGagctac-gaagaggtggagccaggatttgaacccaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176108 69 + 51301725 GCTAATACTACCTGTGTCTCACCACCGTGACATGGAGCTAC-GAAGAGGTGGAGCCAGAA-TTGAACCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881467 70 + 50890351 GCTAATACTACCTGTGCCTCACCACCGTGACATGGGgctac-gaagaggtggagccaggatttgaacccaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464581 66 + 49145316 ACTAATACTACC-GTGCCTCACCACCGCAA-ATGGAGC--C-taagaggacgagccaggatttgaacccaa i calJac3.chr22 I 27 C 0 s canFam3.chr1 102994217 28 + 122678785 ------------------------------------GCTCCTCAAGAGGT-------GGGTTTGAATCCAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I a score=2257962.000000 s hg38.chr19_GL949748v2_alt 181207 532 + 1064304 gAAGCCTGAGGTCAGAAGGCGGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCGGATGGGCACCTGAATCTTCCTCCACCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCTTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA s panTro4.chr19 59113728 532 + 63644993 gaagcctgaggtcagaAGGCTGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAATGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCGGATGGGCACCTGAATCTTCCTCCACCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAATTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991266 533 + 60714840 gaagcctgaggtcagaaggctgagtccgtgtgtccttccactCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCACATCAGGTACCACCTCTGATGGGCACCTGAATCTCCCTCCACCTGCCTCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCCATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCGTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCACGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGAGGGGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760576 532 - 106955855 GAAGCCTGAGGTCAGAAGGCTGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTACAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCACCTGAATCTTCCTCCATCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTTGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCCTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048191 530 + 64156825 gAAGCCGGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTGTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCAAACCTTCCTCCGCCT-CCCCT-CTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGTTGGGGCAGCCTCATGC----CCCACTAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073686 529 + 59248254 gAAGCCGGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTGTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATTCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAACCTTCCTCCGCCT-CCCCT-CTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCA--CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCACTAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176177 530 + 51301725 GAAGCCTGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAAccttcctccacct-cccct-cTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTGAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881537 530 + 50890351 gaagcctgaggtcagaAGGCTGAATCAGTGCTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGGCGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAACCTTCCTCCGCCT-CCCCT-CCGGTGGGTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464647 529 + 49145316 gaagtctgaggtcagaa-gctgAATCCGGGCTTCCTTCTACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTAGAGAGACGTCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCACGTGTACTGATCCGCCAGCGCCATATCAGGTATCACCTCTTGTGGGCGCCCAAAGCTTCCTCCACGCTGCTCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCC--TGCAGCCCTTGGAGGCGAT--GGGTGTGAGCTCACCC-TGAGGGTACAGATTCAC-CCTTGCACACAGCTCACGCGGGAGCTGGGGCAGCCTCATGT----CCCAAAAGCCCAGCGCAAGGGTCACTGCGGCTCCAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGCC---TCCCCGGTGGA-GGGAGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3705686 531 + 145441459 GAAGTCTGAGGTCGG---GCCTCATTGGCTGCTGCTCCCCCTG-TCACAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCATTGGGGTGCTGGACGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTGGAGAGGCGGCTGCAGACCCAGGTCTTTAAGCTGGGCCTGGCCAAATCTATTCACCATGCCCGTGTGCTCATCCGCCAACGTCACATTAGGTG-AGTTGCAGCTGGGCCTGTAAATCTTTATTTCCCTACTTGTGCCGTTGGTTTCGTTAGCTAAG-TTGCCAT-TCTATCTCCTGTGCAGCCTTTGGAGCTGAC--AGATGTGAGCTTACCCTTGAGGGTTCAGAATCGTGCCCTGCAAACAGCTTATGGGGGACTGGGGACAGCCTTGTTT----CCCCATAGCCCAGCGCAAGGGTCACTGCGGCTCAAGCCGTACACCTTGTGAAGGTGTCTGCCAGGCACTCAAGCAGCTGGACAGGTAACAGCTCTTGGTGCCACCCCCCCTGGA-GGGAGA i mm10.chr7 I 907 I 157 s canFam3.chr1 102994245 518 + 122678785 GATGTCTAAAGT----------GATCAGTGCTTCCTTCCCCTCCTATCAGGTAATGCCCTACTGCGCCGACTTGTACGCATCGGGGTGCTGGATGAGGGCAAAATGAAGTTGGATTACATTCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTTAAGCTGGGCTTGGCCAAGTCCATCCACCATGCCCGTGTGCTGATCCGCCAGCGCCATATCAGGTAACACATCTAGGGG---------TCTATCTTCTCCATCCTCC-TTGGTGGTTGCCCTCACTAAGCTTGCTGTCCTTATCCCCTATGCAGCCCTCGGAGGTGACAAAGGTGTGAACACACCT-TGAGGGTACAGATTGAC-ACCTGCAAAGTGCTCATGGGTTGCTGGGGAGAGCCTCATCCCCTGCCCCGTAGCCCAGCGCAAGGGTCACTGCGGCCTAAGCCGTACACCTTGCGAAGGCTTCTA-CAGGCATGCATGCAGCCAGACAGGTAACCGTTCCCGGTG---TGCCTGGTGAA-CAGAGA i canFam3.chr1 C 0 C 0 a score=556289.000000 s hg38.chr19_GL949748v2_alt 181739 195 + 1064304 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCGCTTGTGAAGTTGATTCCAGACCCCGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCCTTTCTGTAATGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT s panTro4.chr19 59114260 195 + 63644993 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCGCTTGTGAAGTTGATTCCAGACCCCGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCCTTTCTGTAATGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991799 195 + 60714840 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCGGCTGTCTCCTGGCTTGCTTGTGAAGTCGATTCCAGACCCTGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCATTTCTGTAACGTGGCACCA---------TTGAGGCGGAGGAGCTGTACAGAAAGAGCGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761108 195 - 106955855 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCTCTTGTGAAGTTGATTCCAGACCCTAATCCATGACTGCATTCTGGGTACTCAGTGTGCCCCTTCTGTAACGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048721 195 + 64156825 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTCCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTGTACAGGAAGAGGGCAAGATGTTAGCGTTTAGAATCTCCGCCCCAGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074215 195 + 59248254 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTCCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTGTACAGGAAGAGGGCAAGATGTTAGCGTTTAGAATCTCCGCCCCAGCCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176707 194 + 51301725 GAACCA----GCCTCTCCTCGCTCGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGCTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCTCTT-CTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTATACAGGAAGAGGGCAAGATGTTAGCATTTAGAATCTCCTCCCCAGCCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882067 195 + 50890351 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGTTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTTCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTACACAGGAAGAGGGCAAGATGTTAGCATTTAGAATCTCTGCCCCAGCCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465176 191 + 49145316 GAACCA----GCCT--CCTCACTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCTCTTGTTAAGTCAGTTCCAGACCGTAAGCTGTGAGTGCGTTCTGGGTACTCGG-GTGCCCTTTCTGTAACATGGCACCA---------TTGAGAGGGAGGAGCTGTGCAGG-AGAGGCCACGACGTTTACATGTAGAATATCCACCTCAGCCCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994763 168 + 122678785 -AGTCATTGGATCTCTACTGGTTTGGGTGGGTGTGTGGGTTCAGTTG------GGCCCACTTGTGGAATC-ATTCAGGAGCCTGGT-GGTTATCGTGTCCTG---ACACACTGT-CCGTGTTGGTGAGTTGACCACAGTCCATGGTCTGATGGTCAAGTGCTG----------GGGC---CTGTGGGAGTCTGG------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706217 157 + 145441459 I a score=704981.000000 s hg38.chr19_GL949748v2_alt 181934 326 + 1064304 CACTAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGT-CAATGCT----------TTCGTCGGA-GACG--TAGCCTCGGGTTGCTGTGTTATTGTGGGCATTGCTGCTGCACGT------GGTAATACAGCTCAGTGTCAGGTGTGGGGTTCACGATA--TTTCAGACTCGGAACTTGGGGGCTCTCACATGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTCAGATT------TCTCCTATAAAATGGGGT---TGAGAAAGTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGG------AGGGCGCACGTAGGATCAGGTGCACCCTTCCTGCAGC s panTro4.chr19 59114455 328 + 63644993 CACTAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGT-CAATGCT----------TTCGTCGGA-GACGCGTAACCTCGGGTTGCTGTGTTATTGTGGGCATTGCTGCCGCACGT------GGTAATACAGCTCAGTGTCAGGCGTGGGGTTAACAATA--TTTCAGACTCGGAACTTGGGGGCTCTTACACGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTATCGGATT------TCTCCTATAAAATGGGGT---TGAGAAAGTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCGTAGGATCAGGTGCACCCTTCCTGCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991994 326 + 60714840 CACTAACCCTGTGAGCCATAGGCAGA---GCCTTGTGTGT-CAGTGCT----------TTCGTCGGA-GACG--TAGCCTCGGGTTGCCGTGTTATTGTGGGCATTGCTGCCGCACGT------GGTAATACAGCTCAGTGTCAGGTGTGGGGTTCAGGATA--TTTCAGACTCGGAACTTGGGGGCTCTTACACGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTCGGATT------TCTCCTATAAAATGGGGT---TGAGAAACTCATC----TGAAGTATT--TTG--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCATAGGATCAGGTGCACCCTTCCCGCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761303 326 - 106955855 CACGAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGT-CAGTGCT----------TTCGTCGGA-GACG--TAGCCTCGGGTTGCTGCGTTATTGTGGGCATTGCTGCCGCGCGT------GGTAATACAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTTGGGGGTTCTTACACGGCCACCTCATTTGCTTTGTAGTCTTAGGT------GGGAT-----------------------------GCTTTTGAATT------TCTCCTATAAAATGGGGT---TGAGAAACTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCATAGGATCAGGTGCACCCTTCCCGCAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048916 315 + 64156825 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGT-CAGCG----------------------------TAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCGGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAGTT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCGTT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074410 315 + 59248254 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGT-CAGCG----------------------------TAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCGGCCGCCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAGTT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCATT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176901 315 + 51301725 CACTAAGCCTGTGAGCCGCAGGCAGA---GCGTCGTGTGT-CAGCG----------------------------TAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--CTTCAGACTCGGAACTT--GGGCTCTTCTTCGGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCATT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882262 314 + 50890351 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGT-CAGTG----------------------------TATCCCCGCGTTGCCGTGCTTTTGTGGGCATTGCTGCTGCACCT------GGTAATGCAGCTCAGTGTCAGG-ATGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCAGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCTAGAAAATGTGGT---TGAGAAACTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465367 307 + 49145316 CACTAACCCTGTGAGCCGTGGGCAGA---GCCTTCTGTGTGTGACGCC----------TTCACTGTG-GACA--TAGCCTCAGGTTGCTGTGTTACAGTGGGCATTGCTGCCGTGTGT------GGTCA---AGCTCAGTGCCAGGTGTGGGGTTGAG--TG--TTTCACACTTCGGACTT--------TTAAT--GCCACCTCATTTGCGTTGTGGTCTTATGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCT---AAATGTGGT---TGAGA--------------AAGCATT--TTTGGGGGGGTGAAGGTGATGCCCTAAGACCCTGGACTCACATGAGGCCCACAGGATCAGGAGCGCCCTTCCGGCAGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3706374 194 + 145441459 CACCAATCATGACAGCTATACA-------------------GAGTG----------------------------AAGTCTCAGATTTCTTTCTCACCA--------GCTTTCGTTTAT------GG---------------------GCAGAGAT----------------------------GTACTCTT--------GTCTGAGGTGGTTTGAGACC--ACAT------GGCAT-----------------------------------------------------TACAATGTGGA---CAGGAAGCAAATC-----AAAGCATTAGTAT--GGGCACTCTTGTTTTCCTTCCAAGTTACTGAGTC------------TGAGGTCAGG--------------AGT i mm10.chr7 I 157 C 0 s canFam3.chr1 102994931 383 + 122678785 --CTGGCTCAAGAAGACA-GGGCAGATGGGTCTTTTATCT-GGGTGCTCAGTTTGACCTTTGTCAGATTTTG--TAGACTGGAGTCTCAG----GTGAAGGACAGTAAGGCTGCTCCTTAGATAGATAGTAAAGCCCAGTGTCTGGCAC--ACTTCACTTTGAAAATCAGACCCTGGAATTACTGGCTGCCACT-GGCTCCCCTCCTTCCTTTGTGGTCTTGAGTTCCTCCTGAATGCATCCACAATGCAAACCAGAAGCTCCACACGTTTGAGTTCAGTGATATTCTAAAACTTgggatccctgggtggcgcagcggtttggcgcctg--cct--ttggcccagggcgtgatcctgaagacccgggatc----gaatcccac---atcggg--ctccctgcatggagc i canFam3.chr1 C 0 I 159 a score=234579.000000 s hg38.chr19_GL949748v2_alt 182260 96 + 1064304 GCCTTGGTGTCT------------GCAGCCGTGGCGGCCTCACGGGGTGGGTGGAGAGGAAAGAGTGGTGCGGTAGCTGGGGTTAGCGTCCGTTTCTCCTCCAGTCCA s panTro4.chr19 59114783 96 + 63644993 GCCTTGGTGTCT------------GCAGCCATGGCAGCCTCACGGGGTGGGTGGAGAGGAAAGAGTGGTGCCGTAGCTGGGGTTGGCGTCCGTTTCTCCTCCAGTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992320 96 + 60714840 GCCTTGGTGTCT------------GCGGCCATGGCAGCCTCACGGGGTGGGTGAAGAGGAAAGAGTGGTGGCTTAGCTGGGGTTAGCGTCCGCTTTTCCTCCAGTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761629 93 - 106955855 GCCTTGGTGTCT------------GCAGCCATGGCAGCCTCACAGCGTGGGTGAAGAGGAGAGAGTGGTGCCTTAGCTGGGGTTAGCGTCCGTTT---CTCCAGTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049231 96 + 64156825 GCCTCCGTGTCT------------GTGGCCATGGCAGCCTCATGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074725 96 + 59248254 GCCTTGGTGTCT------------GTGGCCATGGCAGCCTCATGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177216 96 + 51301725 GCCTCGGTGTCT------------GTGGCCATGGCAGCCTCACGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882576 96 + 50890351 GCCTCGGTGTCT------------GTGGCCATGGCAGCCTCACGGGGTGGGTGAAGACGAGAGAGTGGTGCCTGAGCTGGGGTTAGCGTCTGTTTCTCCTCCAGTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465674 99 + 49145316 GCCTGGGTGTCTGCAACCCTAGCAGCAGCCGTGGCCACCTCACGGGCTGAGTGAAGAGGAGA----GGCACCTC-GCTGGGCTT-GCTTCATTCT---CCCCGGTCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3706568 59 + 145441459 GCCTGTGAGCCT------------GC----------------TTGAGTCAAAGGGCAGGACCAAATGGT-------------TCAGCCTCACTTT--------GTCCC i mm10.chr7 C 0 C 0 e canFam3.chr1 102995314 159 + 122678785 I a score=1212966.000000 s hg38.chr19_GL949748v2_alt 182356 293 + 1064304 CCTCACCTTGTCG--CTTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGCTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC s panTro4.chr19 59114879 293 + 63644993 CTTCACCTTGTCA--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGTTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992416 293 + 60714840 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGCTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761722 299 - 106955855 CTTCACTTTGTCA--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGTGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAAC-CCACTTGTC--CCTCCT-----GGGCTGCTGGATTGTGATTGTCTTGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049327 293 + 64156825 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCGTTCATTGTCCGCCTGGATTCCCAGAAGCACATTGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCAGCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGTGGGTGT-CTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074821 293 + 59248254 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCGTTCATTGTCCGCCTGGATTCCCAGAAGCACATTGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ACTGGTGTGTGTGGGTGT-CTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177312 293 + 51301725 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------Gttggtgtgtgtgggtgt-ctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882672 293 + 50890351 CTTCACTTTGTTG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTGTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------GTTGGTGTGTGTGGTTGT-CTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465773 297 + 49145316 CTTAACC-CGTCC--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTCCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGTCAGGGCGGGGCTGGGGCTGGGGATGACGAGGAGGAGGATTAAGC-CCACCTGTCCGCCTCTG-----GGGCTCGTG------GATTGCCGAGTTTTCCTGCT---GAATAAACAGGATCAGCGCTTTATATA-------CTTGGTGTGTTTGTGTCTCCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3706627 286 + 145441459 CTTATTCTGTTCT--TCCTGTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTTCGCCTGGACTCTCAGAAGCACATCGACTTCTCCCTCCGTTCTCCTTATGGCGGCGGCCGTCCAGGCCGAGTGAAGAGGAAGAATGCCAAGAAAGGCCAGGGCGGGGCTGGAGCTGGTGATGATGAGGAAGAGGATTAATTAATACTTGGC-------T-----GAACTGGAG------GATTGTCTAGTTTTCCAGCTGAAAAATAAAAAAGA------ATT--GATA-------CTTGGTTTATTGGTGTGC-CTC i mm10.chr7 C 0 I 5733 s canFam3.chr1 102995473 303 + 122678785 CCTCACC-TGCCATCCCCCCTCCAGGGTCCGAAAGCAGGTAGTGAACATCCCGTCCTTCATTGTCCGCCTGGACTCCCAGAAGCACATCGACTTCTCCCTCCGTTCTCCGTATGGGGGTGGCCGCCCAGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGAGCCGGTGATGACGAAGAGGAGGACTGAAC-CCACCCTTC--CATCCCTTTCAGGGCCCGTG------GATTATCTAGTTTTCTAGGC---CAATAATAA--AACAGTGTTT--TGGAATCGTTTATTGGTTTATTGGTGTGT-CT- i canFam3.chr1 I 159 C 0 a score=61115.000000 s hg38.chr19_GL949748v2_alt 182649 59 + 1064304 ATCCTTGACTCTTTCCCCTGCTCTAAACATGCAGCCTTCCCTGGGA--------------GGCTCAC----------TCACTT---- s panTro4.chr19 59115172 58 + 63644993 CTCTTTGACTCTTTCCCC-GCTCTAAACATGCAGCCTTCCCTGGGA--------------GGCTCAC----------TCACTT---- i panTro4.chr19 C 0 I 13 s ponAbe2.chr19 55992709 59 + 60714840 CTCCTAGACTCTTTCCCCTGCTGTAAACATGCAGCCTTCCCTGGGA--------------GGCTCAC----------TCACTT---- i ponAbe2.chr19 C 0 I 733 s nomLeu3.chr10 102762021 29 - 106955855 CTC---GGCTCACTCTCT-------------------TCCGGGTGA--------------TACTT---------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049620 48 + 64156825 CTT---GACTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075114 48 + 59248254 CTT---GACTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177605 48 + 51301725 CTT---GACTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882965 48 + 50890351 CTT---GCCTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466070 66 + 49145316 CTT---GACTCTTAACCCTGCTCTGACCTTGCCGCCTTTCCTAGGA--------------AGCTTGGGGCAGCTCACTCGCTT---- i calJac3.chr22 C 0 I 18 s canFam3.chr1 102995776 60 + 122678785 ---------------CCCTGTTCTGAACATACAGC--TCCCTGTGGTGGGAAAAAATGATGGCTGGG----------TCCTCCAACC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=33766.000000 s hg38.chr19_GL949748v2_alt 182708 13 + 1064304 GGGAGTGCCTACC- s panTro4.chr19 59115243 13 + 63644993 GGGAGTGCCTACC- i panTro4.chr19 I 13 C 0 s ponAbe2.chr19 55993501 13 + 60714840 GGGAGTGCCTACC- i ponAbe2.chr19 I 733 C 0 s nomLeu3.chr10 102762050 13 - 106955855 GGGAGTGCCTACC- i nomLeu3.chr10 C 0 M 276 s rheMac3.chr19 60049668 13 + 64156825 GAGCGTGCCTACC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075162 13 + 59248254 GAGCGTGCCTACC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177653 13 + 51301725 GAGCGTGCCTACC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883013 13 + 50890351 GAGCGTGCCTGCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466154 13 + 49145316 GGGAATGCCTACC- i calJac3.chr22 I 18 C 0 s canFam3.chr1 102995836 11 + 122678785 ---AGGACCCTCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=163226.000000 s hg38.chr19_GL949748v2_alt 182721 106 + 1064304 AGCTAGTGGTCCCTGGCCT-------------CTCAGTACTA---TTCTACAGTAGTGAAC-ACACATCTTTACCAGAAACTTCTGTCATCAGGGGAGAGACGAGTGGTATTTTTGGAAAAAC s panTro4.chr19 59115256 106 + 63644993 AGCTAGTGGTCCCTGGCCT-------------CTCAGTACTA---TTCTACAGTAGTGAAC-ATACATCTTTACCAGAAACTTCTGTCATCAGGGGAGAGACGAATGGTATTTTTGGAAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993514 106 + 60714840 ACCTAGTGGTCCCTGGCCT-------------CTCCGTACTG---TTCTGCAGTAGTGAAC-ACACATCTTTACCAGAAACTTCTGTCATCACGGGAGAGACGAATGGTATTTTTGGAAAAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60049681 107 + 64156825 AGACAGTGGTCCCCGGCCT-------------CACAGTACTACTCTTCCACAGTGGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i rheMac3.chr19 C 0 I 321 s macFas5.chr19 55075175 107 + 59248254 AGACAGTGGTCCCCGGCCT-------------CGCAGTACTACTCTTCCACAGTGGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177666 107 + 51301725 AGACAGTGGTCCCCGGCCT-------------CTCAGTACTACTCTTCCACAGTACTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883026 107 + 50890351 AGACAGTGGTCCCCAGCCT-------------CTCAGTACTACTCTTCCACAGTCGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466167 65 + 49145316 AGATGGTGGGCCCTGGCCT---------------CAGTAATG-----------------------------------------CTGTCATCAGCAGAGAGAC--ACGGTATCTTGGGAAAAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995847 103 + 122678785 AGCAGGTGGTCCTTGTTCCTTGTTCCTTGGGGCATGGGTATAATCTGGTACACTCCTGAGCAACACAAACACACC---ACTTCCTTATTTCAGTGGGGATGCCAGC----------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e nomLeu3.chr10 102762063 276 - 106955855 M a score=849.000000 s hg38.chr19_GL949748v2_alt 182827 6 + 1064304 TGTGTC s panTro4.chr19 59115362 6 + 63644993 TGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993620 6 + 60714840 TGAGTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55075282 4 + 59248254 --AGTC i macFas5.chr19 C 0 I 337 s papAnu2.chr19 47177773 4 + 51301725 --AGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883133 4 + 50890351 --AGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102995950 4 + 122678785 TGTG-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e calJac3.chr22 45466232 0 + 49145316 C e nomLeu3.chr10 102762063 276 - 106955855 M e rheMac3.chr19 60049788 321 + 64156825 I a score=74474.000000 s hg38.chr19_GL949748v2_alt 182833 31 + 1064304 AAAACCAGAAGGAAATTCCAAGTAAGCCGGT- s panTro4.chr19 59115368 31 + 63644993 AAAACCAGAAGGAAATTCCAAGTAAGCCGGC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993626 31 + 60714840 AAAACCAGAAGGAAATTCCAAGTAAGCCGGC- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60050109 31 + 64156825 aaaaCCAGATGGAAATTCCAAGTAAGCCGGC- i rheMac3.chr19 I 321 C 0 s macFas5.chr19 55075623 31 + 59248254 aaaaCCAGATGGAAATTCCAAGTAAGCCGGC- i macFas5.chr19 I 337 C 0 s papAnu2.chr19 47177777 31 + 51301725 AAAACCAGATGGAAATTCCAAGTAAGCCGGC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883137 31 + 50890351 AAAACCAGATGGAAATTCCAAGTAAGCCGGT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466232 29 + 49145316 --AGCCAGAAGGAAATTCCAAGTAAGCCAGC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995954 25 + 122678785 ----CTAGGGGGAAGTTCT---CAAGCCACCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e nomLeu3.chr10 102762063 276 - 106955855 M a score=1673992.000000 s hg38.chr19_GL949748v2_alt 182864 680 + 1064304 GTTTGCATATAGGGGTGGGAGGGAGCCGGTCATTGCTAGGCAGGGCAGGCGCCGAGTGGAGGTGGG--GGCCTTCCCTGCCTGCTGGCCCTGGGACCCTGACCCCGCCAGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CAGAGGCTGA-CGGGTTGCTGGGGAAGG---TG-AACTGTTGGTGATTG----TTG---GGGAACACTTCACAGAATTTGCTTGCTAGTTTCAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGAGAAGGGGCGTTGAGGGAAGTCTGTTCCTCCTCTCCGCGTTCAGTGCTTCTGTGGACTCA--CGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCAGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACCCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGGGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCTTACTCAAGCTAGG---------------------------------------------------------------TGGTTGGCCCTT-CCTTCCCTCAGCGTTGCTACTTGGG--AAATGACGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCATCT s panTro4.chr19 59115399 680 + 63644993 GTTTGCATATAGGGGTGGGAGGGAGCCAGTCATTGCTAGGCAGGGCAGGTGCTGAGTGGAGGTGGG--GGCCTTCCCTGCCTGCTGGCCCTGGGACCCTGACCCCACCGGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CAGAGGCTGA-CAGGTTGCTGGGGAAGG---TG-AACTGTTGGTGATTG----TTGTTGGGGAACACTTCACAGAATTTGCTTGCTAGTTTCAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGAGAAGGGGCGTTGAGGGAAGTCTGTTCCTC---TCCGTGTTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCGTTTTCTCAGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACCCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGGGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTGAACCACGCGGAGAATC----CCATTGCGGCTTACTCGAGCTAGG---------------------------------------------------------------TGGTTGGCCCTT-CCTTCCCTCAGCGTTGCTACTTGGG--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993657 681 + 60714840 GTTTGCATATAGGGGTGGGAGGGAGCCAGTCGTTGCTAGGCAGGGCAAGCGCCGAGTGGAGGTGGG--GGCCTGCCCTGCCTGCTGGCCCTGGGACCCTGACCCCGCCGGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CTGAGGCTGA-CGGGTTGCTGGGGAAGG---TG-AACTGTTAGTGATTG----TTGTTGGGGAGCACTTCACAGAATTTGCTTGCTAGTTTTAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTAGGTTAGCGTAGGGGAAGGGTCGTTAAGGGAACTCTGTTCCTCCTCTCCGCGTTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGTCTTGTTGATCATC--TGTT---------GGGGAGGGGTTTGGTTTCTGAGGAAGTGAGAAGCCTGAAATTGTGCAACCCTCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCTTACTTGAGCTAGG---------------------------------------------------------------TGGTTGGCCCTT-CCTTCCCTCAGGGTTGCTACTTGGG--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102762339 677 - 106955855 GTTTGCATATAGGGGTGGGAGGGAGCCAGTGATTGCTAGGCAGGGCAGGTGCCACGTGGAGGTGGG--GGCCTGCCCTGCCTGCTGGCCCTGGGACCCTGACCCCACCCAGCAAGAGACAGGT--GGGACGGGAGCTGAC--CTGAGTCTGA-CGGGTTGTTGGGGAAGGTGATG-AACTATTAGTGATTG----TTG---GGGAGCACTTCACAGAATTTGCTTGTTAGTTTCAAAGC----TTGTGATGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGGGAAGGGGCGTTGAGGGAA--CTGTTCGTCCTATCCACGGTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACTCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGACAGTTCTGGAACACAGCTGAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCCGACTCGAGCTAGG---------------------------------------------------------------TGGTTGGC-----CCTTCCCTCAGGGTTGCTACTTGGA--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCGTCT i nomLeu3.chr10 M 276 C 0 s rheMac3.chr19 60050140 669 + 64156825 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTTGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGACGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CGGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACACGTAGGGGAAGTGGGTTTGTGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCCTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAACCTTGAACTTGGGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCGGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGT---GAAGT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGA---TGGTCTTGTTGGATGTCCATGGGGCCAGCTGCTGCAGCGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075654 672 + 59248254 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTCGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGACGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CGGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACACGTAGGGGAAGTGGGTTTGTGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCTGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGT---GAAGT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGATGGTGGTCTTGTTGGACGTCCATGGGGCCAGCTGCTGCAGCGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177808 675 + 51301725 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTCGATGCCAGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTg-tggccctgggaccctgacCCTGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGATGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACTGAATTTGC----CAGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTTCCGGTTTTGTCTTCACATGTAGGGGAAGTGGGTTCATGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGTGGAGAAGT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGATGGTGGTCTTGTTCGACGTCCATGGGGCCAGCTGCTGCAGCGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883168 643 + 50890351 GTTTGCTTATAGGGGTGGGAGGGAGCCTGTCGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCTGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAGGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGAAGG---TG-AACTGTTAGTGACTC-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CAGTTTCAAAGCTTGTTTGTGATGTGGTTGATGTTGGGCAAGTTCCCGGTTTTGTCTTCACATGTAGGGGAAGTGGGTTCGTGTAGGGGAAGGGGCGTTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGCCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGCTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTGGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAGACCACGCGGAGAAAT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTA----------------------------------CATGGGGCCAGCTGCTGCACCGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466261 645 + 49145316 GTTTGCATATA-GGGTAGAAGGGAGTTGTTCATTTCCAGGCAGGGGATGCAGC--GTGCAGGT-GG--GGCCTGCCCTGGCTGTTGGCCCTTTGACCCTGACCCGG-------GGAGAGAAGT--GGGCTGGGAGCTGACCTCTGAGGCTGGCCTGGTTTTTGGGGAAGG---TG-GACTGTTGGTGGTGA--TTTCGCTGGGCAGCACTTCATAGAA-CTGCGGGCTCGTGTCGGAGC----TCGTGATGTGGGTGATGCTGGGCAAGTTCCCAGCTTTGTCTTCACTCCGAGGGGAAGTCGGTTGGTGT-GGGGGAGGGGTGTTGAGGGAA--CTCTTCCTCCTACCCACGCTTGGT--TTCTGTGGACTCA--TGGTCAGGAGGTT---AGGCTTCCGTTTTCTCTGCCTTGTTGATAAGCTGTGTC---------GGGATGGGG-TTGGTCTCTGAGGAAGTGAGAAACTTGAAACTGTGCAACCTTCT---------------------------CAGGCCCTAGTCGCTGGGGTTCTTGTCTA--------GAGGCCTTCAGTC------------TTTGAGGG---------------TCAGGGGCGCAGCTGAGTT-CT--------GTAAACCCTGCAGAGCAGTCAGCCCACTGCAGCTT----GAGCTAGG---------------------------------------------------------------TGGGCAGC-----CCTTCTCTCCGGGTTGCCACTTGGG--AAATGATGGTGGTCTTGTTGGACGTTCACGGGGCCAGCTGCTGCACCTTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995979 713 + 122678785 ATTTGCATGGTGGTGAGCGAGGGA---------------GCAGGGAAAGTG-TGGGTGGAGGTTGGTTGGCATGGTCAACC---CAGCCCT-----TCTAGCCTTGGCAAAAAGAAGTCGGGTTCAGGTTGGCAACTGAGCGCTGAACCT---TGGGTTACAAGTGAGAA---TGAAACAGTT--TAATTGGGTTTTGCTGGGGAGCATTGGACAGGAAGGACAGGCCAGTTTCAAAGC----TTATTTCG--------------------------------------------------------GTGTGGGGAAAATGGC--TGAGGCACCCTGCTCCATCCCCCCTGCATCTGGAG--TTTGTGAACCCAGTGAGTCAGGAAGAAGACTGGCTTCCATTTTCTCTGTCTTGCTGAGAAGTTGGATCAGGCAGAGGAGGAAGGGGCTTGGTCTCAGGAAACACAAAGCCCTTGGCATTGAGCAAC-CCCTCATGGGCTGTGGCACTGCTGAGCTCTGAGGTCAGTGATGGCCTGGGACGCTGCCAGGCTGCCATGGAGCCTGCAGGAGGTCCCCAGTCCTTCCAGCTTAGTGCTGG----GTTCCCCCACGCCACAAGGTTACCATGTGGTAATAAATGATGTTAGCATTT----CCTTGGCATCTTACAGAAACTAAGATGAGCTGTGTACTGATGGGAATTCTGGAAGCAATCGACTCTCGTAAGACCCCAGGAAGTTCCTGG-TGGTCCTTGTCCTGCCTCCAGGCTG--GCTGGGGTCAAGTGGTA-----CCTGC----------TGTGAGCAGCTCCTGTGCCTTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=631131.000000 s hg38.chr19_GL949748v2_alt 183544 225 + 1064304 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCGTGGGGTCTGGG------------CTAGTGGATGGCCGGGGCAGCGTACTCACTGGGCTC--CTGGGAGCTCC----CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAA-TTGC-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTGGGGAGAAG s panTro4.chr19 59116079 236 + 63644993 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-CTGGGCTAGTGGATGGCCAGGGCAGCGTACTCACTGGGCTC--CTGGGAGCTCC----CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAA-TTGC-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTGGGGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994338 221 + 60714840 GGGCTCACTGT----GGT---CTT---CCTTGGAGTGTGGGGTCTGGGTCTTGT-CTGGACTAGTGGATGGCCAGGGCAGCCTACTCACTGGGCT------------------CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGCAGCTCACCTGGGTGTAGCTCGCAA-TTGT-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTCGGGAGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763016 235 - 106955855 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCATGGCGTCTGGGTCTTGT-CTGGGCTAGTGGATGGCCAGGGCAGCGTATTCACTGGGCTC--CTGGGGGCTCC----CC----TGGGAGGAAGAGA---CAGTTG--TCTGGTCT-AGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAATTTGT-GGAGTTCCAGATGCAGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGTGGTT---CTGGGGAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60050809 234 + 64156825 GGGCTCACTGT----GGT---CTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTCGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGGGTGCAGTTG--TCTGGTCT--GAG---GT---GGTGGCCCACCTGGGGGTAGCTCCCCC------AGAGCTCCAGATGCAGCCGCCTGGAGGGAGAGAGGAGTGGGAGGTGAGGCGTGCGGTTCTGCTGGGGAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076326 232 + 59248254 GGGCTCACTGT----GGT---CTT---GCTTGGACCGTGGGGTCTGGGTCTTGT-GTGGGCTCGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGA--GTGCAGTTG--TCTGGTGT--GAG---GT---GGTGGCCCACCTGGGTGTAGCTCCCCC------AGAGCTCCAGATGCAGCCGCCTGGAGGGGGAGAGGAGTGGGAGGTGAGGCGTGCGGTTCTGCTGGGGAGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178483 234 + 51301725 GGGCTCACTGT----GGT---CTT---GCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTAGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGAGTGCAGGTG--TCTGGTCT--GAG---GT---GGTGGCCCACCTGGGTGTAGCTCACCC------AGAGCTCCAGATGCAGCCgcctggagggagagaggagtaGGAGGTGAGGTATGCGGTTCTGCTGGGGAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883811 234 + 50890351 GGGCTCACTGT----GGT---CTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTAGTGGATGGCCAGGGCAGCGTAGTCATTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGAGTGCAGTTG--TCTGGTCT--GAG---GT---GGTGGCTCACCTGGGCGTAGCTCACCC------AGAGCTCCAGATGCAGCAGCCTGGAGGGAGAGAGGAGTGGGAGGTGAGGTATGCGGTTCTGCTGGGGAGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466906 214 + 49145316 GGGGTCACCGT----GGT---CT------TTGGAGCGTGGGGTCTGGGTCTTGTCCTGGCCTAGTGGATGGCCAGAGCAGCGGATTCACTGGGCTC------------C----CT----TGGGAGGAAGAAAGTGCAGTTGCCTCTAGTCTGAGAT---CT---GGTGGCTCATCTGGGTGCAGCTCACATCTTATGGGAGTTCCAGATGCAGCAGCCTGGAGGGAGGG-------------GAGGGATGTGGTT---CTGTGGAGAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3712646 232 + 145441459 GGGGTCATTGC----TCC---ATG---TCCTTGGGAACAGCCTCTGG--------ACGAGC-----AGCCGCCAGAGTAGCATATACACTGGGCTCCTCTGGGGCTTCCCCTGCC----TGGGAGAGAGGAGATGCAGCTGCCCCCTGTCT--GAGTGTCC---TGCTGCACAGCTGGGCATAGGTCACATCCTGG-GACTCCCCAGATTCGGCAGCCTGGAGTGGGAGAGG-GTGAGAGA-AAGGTATGTGATT-TGCTTGGG-GAAA i mm10.chr7 I 5733 C 0 s canFam3.chr1 102996692 243 + 122678785 GGGGTCCCTGTAGGGAGT---CTTAAGACCTCGAGTGTGGGGTCTGGGTCCT-T-CTGGGCTAGTAGAAGGCCAGAGCAGCATACACACTGGGCTCCTCTGGGGGCTCC----TCTGATTGGGAGGGAGAGGATGCACTTGTTTCCTGTCG--GAG---GGTCAGATGGTTCAGTTGGATATAGATCACATCTTGC-TGGTCCTCAGATATAGCCACCTGGAGCAGGGGGAGAGGA------AAGGCACGTGG-----CTGAGAAGAGG i canFam3.chr1 C 0 I 3199 a score=37203.000000 s hg38.chr19_GL949748v2_alt 183769 15 + 1064304 CCTACGGGCTTGGAA s panTro4.chr19 59116315 15 + 63644993 CCTACGGGCTTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994559 15 + 60714840 CCTACGGGCTTGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763251 15 - 106955855 CCTATGGGCCTGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051043 14 + 64156825 CCTGCAGGCTTGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076558 14 + 59248254 CCCACAGGCTGGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178717 15 + 51301725 CCTACAGGCTTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884045 15 + 50890351 CCTACAGGCTTGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467120 15 + 49145316 CCTACCGGCTTGGGA i calJac3.chr22 C 0 I 203 s mm10.chr7 3712878 15 + 145441459 CCTGCAGGTCTGTGG i mm10.chr7 C 0 C 0 e canFam3.chr1 102996935 3199 + 122678785 I a score=20962.000000 s hg38.chr19_GL949748v2_alt 183784 8 + 1064304 AGGAAAAG s panTro4.chr19 59116330 8 + 63644993 AGGAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994574 8 + 60714840 AGGAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763266 8 - 106955855 AGGAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051057 8 + 64156825 AGGAAACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076572 8 + 59248254 AGGAAACG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178732 8 + 51301725 AGGAAACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884060 8 + 50890351 AGGAAACG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712893 8 + 145441459 AGGACAGG i mm10.chr7 C 0 I 3546 e canFam3.chr1 102996935 3199 + 122678785 I e calJac3.chr22 45467135 203 + 49145316 I a score=120798.000000 s hg38.chr19_GL949748v2_alt 183792 65 + 1064304 GG------TCTTCAGGGCTCTGTCTACAGAGGCAGCGAGCGGGGCAACAGAG---GGAGACTCCATCTCAAG--------------------------------------------------AA s panTro4.chr19 59116338 63 + 63644993 GG------TCTTCAGGGCTCTGT--ACAGAGGCAGCGAGCGGGGCAACAGAG---GGAGACTCCATCTCAAG--------------------------------------------------AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994582 71 + 60714840 GGTCTTCATCTTCAGGGCTCTGTCTACAGAGGCAGCGAGCGGGGCAACGGAG---GGAGACTCCATCTCAAA--------------------------------------------------AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763274 120 - 106955855 GGTCTTCATC-TCAGGGCTCTGTCTACAGAGGCAGCGAACGGGGCAACAGAG---GGAGACTCCAGCTCAGGGCTCTGTCTACAGAGGTGGCGAGCGGGGCAACAGAGAGAGACTCCAGCTCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051065 73 + 64156825 GGTCTTCATCTTCAGGGCTCTGTGAACAGAGGCAGCGAGT-GGGCAACAGAGGGAGGAGACTCCGTCTCGAA--------------------------------------------------AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076580 73 + 59248254 GGTCTTCATCTGCAGGGCTCTGTGAACAGAGGCAGCGAGT-GGGCAACAGAGGGAGGAGACTCCGTCTCGAA--------------------------------------------------AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178740 74 + 51301725 GGTCTTCATCTTCAGGGCTCTGCGTACAGAGGCAGCGAGTGGGGCAACAGAGggaggagactccatctcgaa--------------------------------------------------aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884068 74 + 50890351 CGTCTTCATCTTCAGGGCTTTGCCTACAGAGGCAGCGAGTGGGGCAACAGAGGGAGGAGACTCCATCTCGAA--------------------------------------------------AA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e canFam3.chr1 102996935 3199 + 122678785 I e calJac3.chr22 45467135 203 + 49145316 I a score=304076.000000 s hg38.chr19_GL949748v2_alt 183857 115 + 1064304 tttgtagagatggagtctcaatgtgttgccccggctgatctaaaaccct----tggcctcaagcaatccactc------gcctcccaaagcgctaggatgacaggtgtgagccacagtgcctggc s panTro4.chr19 59116401 115 + 63644993 tttgtagagatggagtctcaatgtgttgccccggctgatctaaaaccct----tggcctcacgcaatccaccc------gcctcccaaagcactaggatgacaggtgtgggccacagtgcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994653 115 + 60714840 tttgtagagatggggtctcaatgtgttgccccggctgatctaaaactct----tggcctcaagcaatccactc------gcctcccaaagcgctaggatgacaggtgcgagccacagtgcctggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763394 115 - 106955855 tttgtagagatggggtctcactgtgttgccccggctgatctaaaactct----tggcctcaagcaatccaccc------gcctcccaaagcgctaggatgacaggtgtgagccacagtgcctggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051138 114 + 64156825 tttgtagagacga-gtctcactgtgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacagtgcccggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076653 114 + 59248254 tttgtagagacga-gtctcactgtgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacagtgcccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178814 114 + 51301725 tttgtagagacgg-gtctcactatgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacaatgcccggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884142 118 + 50890351 tttgtagagacgg-gtctcaccatgttgccctggctgatctcaagcaatccacccacctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccgcagtgcccggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467338 119 + 49145316 ttagtagagacggggtttcaccatgttgaccaggatggtctcgatctct----tgacctc--gtgatccacctgcctcggcctcccaaagtgctgggattataggcatgagccaccgtgcccggc i calJac3.chr22 I 203 C 0 e mm10.chr7 3712901 3546 + 145441459 I e canFam3.chr1 102996935 3199 + 122678785 I a score=4500.000000 s hg38.chr19_GL949748v2_alt 183972 1 + 1064304 c s panTro4.chr19 59116516 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994768 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763509 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051252 1 + 64156825 c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076767 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178928 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884260 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467457 1 + 49145316 c i calJac3.chr22 C 0 I 54 s canFam3.chr1 103000134 1 + 122678785 C i canFam3.chr1 I 3199 C 0 e mm10.chr7 3712901 3546 + 145441459 I a score=46133.000000 s hg38.chr19_GL949748v2_alt 183973 20 + 1064304 TGCGTGGGTCTGTTTAATCT s panTro4.chr19 59116517 20 + 63644993 TGCGTGGGTCTGTTTAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994769 12 + 60714840 TGCGTGGGTCTG-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763510 20 - 106955855 TGCATGGGTCTGTTTAATCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051253 20 + 64156825 TGCGTGGGTCTGTTTAATCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076768 20 + 59248254 TGCGTGGGTCTGTTTAATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178929 20 + 51301725 tGCGTGGGTCTGTTTAATCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884261 20 + 50890351 TGCTTGGGTCTGTTTAATCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103000135 20 + 122678785 TGAGTGGATGTCCTTCATCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e calJac3.chr22 45467458 54 + 49145316 I a score=11340.000000 s hg38.chr19_GL949748v2_alt 183993 6 + 1064304 CCGGGC s panTro4.chr19 59116537 6 + 63644993 CCGGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102763530 6 - 106955855 CCGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051273 6 + 64156825 GCGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076788 6 + 59248254 GCGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178949 6 + 51301725 CCGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884281 6 + 50890351 CTGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467512 6 + 49145316 CCTGGC i calJac3.chr22 I 54 C 0 s canFam3.chr1 103000155 6 + 122678785 CCATGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e ponAbe2.chr19 55994781 0 + 60714840 C a score=108917.000000 s hg38.chr19_GL949748v2_alt 183999 38 + 1064304 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC s panTro4.chr19 59116543 38 + 63644993 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994781 35 + 60714840 ----TTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGATCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763536 38 - 106955855 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----TTCCTTGGACCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051279 38 + 64156825 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i rheMac3.chr19 C 0 I 43 s macFas5.chr19 55076794 38 + 59248254 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47178955 38 + 51301725 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46884287 38 + 50890351 CT-CTTGCTCCCCCTTCCTTGG-TGAT-----CTCCTTGGACCAC i chlSab2.chr6 C 0 I 46 s calJac3.chr22 45467518 39 + 49145316 CTGCTGGGTCTCCCTTTCCTGG-TGAG-----CTCCTTCGACCAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3716447 38 + 145441459 CT-CCTGTTCTCATCTTCTT-G-TGATCAATCCTGCTTAGG---- i mm10.chr7 I 3546 C 0 s canFam3.chr1 103000161 39 + 122678785 CC-CTCACCGGCCATTTTTCAGCCCCT-----GTCCCTAGAACAT i canFam3.chr1 C 0 C 0 a score=24858.000000 s hg38.chr19_GL949748v2_alt 184037 23 + 1064304 ATCCCTGTAT-CATTCT-----------------CTCTCTC- s panTro4.chr19 59116581 23 + 63644993 TTCCCCGTAT-CATTCT-----------------CTCCCTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994816 23 + 60714840 TGCCCCGTAT-CATTCT-----------------CTCTCTC- i ponAbe2.chr19 C 0 I 19 s nomLeu3.chr10 102763574 23 - 106955855 TTCCCTGTAT-CATTCA-----------------CTCCCTC- i nomLeu3.chr10 C 0 I 19 s macFas5.chr19 55076833 23 + 59248254 GCCCCCATCT-CATTTT-----------------CTCCCTC- i macFas5.chr19 I 1 I 19 s papAnu2.chr19 47178994 22 + 51301725 GCCCCCATC--CATTTT-----------------CTCCCTC- i papAnu2.chr19 I 1 I 19 s calJac3.chr22 45467557 23 + 49145316 TGCCCCATCT-CATTCC-----------------CTCCCTC- i calJac3.chr22 C 0 I 19 s mm10.chr7 3716485 41 + 145441459 ATTCCTGTATCCATCCTAGCCATAAGCTCCCCAGCCCTCTC- i mm10.chr7 C 0 C 0 s canFam3.chr1 103000200 24 + 122678785 GGCCCCATCT-CAGCCT-----------------GTGCTCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46884325 46 + 50890351 I e rheMac3.chr19 60051317 43 + 64156825 I a score=267977.000000 s hg38.chr19_GL949748v2_alt 184060 95 + 1064304 GACCCT-------GAGCCC-----A--------GGGT----------CCAGAG----CAGAGAACGGGATGGGGTCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGGTGGGGGCGACGGGGGA s panTro4.chr19 59116604 95 + 63644993 GACCCT-------GAGCCC-----G--------GGGT----------CCTGAG----CAGAGAACGGGATGGGGGCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGGTGGGGGCGACAGGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994858 95 + 60714840 GACCCT-------GAGCTC-----A--------GGGT----------CCTGAG----CAAAGAACGGGACGGGGGCTGGGTA---GGGGCCCCTCACTTGGAACCAGGATGTTGGGTGGGGGCGACAGGGGG i ponAbe2.chr19 I 19 C 0 s nomLeu3.chr10 102763616 95 - 106955855 GGCCCT-------GAGCCC-----A--------GGGT----------CCTGAG----CAGAGAACGGGATGAGGGCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGATGGGGGCGACGGGGGG i nomLeu3.chr10 I 19 I 112 s rheMac3.chr19 60051360 92 + 64156825 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGACGGGG-- i rheMac3.chr19 I 43 C 0 s macFas5.chr19 55076875 92 + 59248254 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGACGGGG-- i macFas5.chr19 I 19 C 0 s papAnu2.chr19 47179035 92 + 51301725 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGTGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGATGATGGGG-- i papAnu2.chr19 I 19 C 0 s chlSab2.chr6 46884371 92 + 50890351 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTGGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGTTGGGG-- i chlSab2.chr6 I 46 C 0 s calJac3.chr22 45467599 94 + 49145316 GACCCT-------GAACCC-----A--------GGGT----------CCTGAG----CAGATAACAAGATGGGGGCTAGGCA---GGGGCTTCTCATCTGCAACCAGGATGTTGGGTGGGGGCCGCAGGGG- i calJac3.chr22 I 19 C 0 s mm10.chr7 3716526 100 + 145441459 CCCCCT-------TATCCCCCATGA--------GAGC-----------CTGAG----CAGAGGCTAGGTCCCTGACTGAGTCTGTTGAGTTCCTCACCTGTGATCAGGATGTCCA--GGGGCTCACTGGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 103000224 119 + 122678785 GACCCTCTCCCCGGACCCC-----ATCACCCAGGGGTGACAGTGGCCCCTGAGCCTTCAGCAGACAGGACATGGGGCAG------GGGGCTCCTCACCTGTGATCAGGATGTCCAGAGGGGCACTGGGTG-- i canFam3.chr1 C 0 C 0 a score=224229.000000 s hg38.chr19_GL949748v2_alt 184155 64 + 1064304 CCGACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGGCCCCCAGGGGGGTGGCT s panTro4.chr19 59116699 64 + 63644993 CCGACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGGCCCCCAGGGGGGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994953 64 + 60714840 CCAACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGTCCCCCATGGGGGTGGCT i ponAbe2.chr19 C 0 I 114 s nomLeu3.chr10 102763823 64 - 106955855 CCAACCTTGGGCAGGAGGCACTGTGTCCACCGCAGCATCTGTGCTGGCCCCCATGGGGGTGGCT i nomLeu3.chr10 I 112 C 0 s rheMac3.chr19 60051452 64 + 64156825 TCAGCCTCCGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGTGGGTGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076967 64 + 59248254 TCAGCCTCCGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGTGGGTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179127 64 + 51301725 CCAACCTCGGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGGGGGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884463 64 + 50890351 CCAACCTCTGGCAGGAGGCATCGTGTCCACCGCAGCATCCCTGCTGGTCCCCATGGGGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467693 59 + 49145316 CCTACCTTGGGCAGGA---AATGTGTCCGCCTCAGCATCTGTGCTGGCCCCC--GGGTGTGGCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3716626 64 + 145441459 CTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACT i mm10.chr7 C 0 C 0 s canFam3.chr1 103000343 64 + 122678785 CTGACCACGTGGAGGAGAGATTGTGTCCACTGTAGCACCTGTACCGGCCCCCGTGGGTGCGGCT i canFam3.chr1 C 0 C 0 a score=571175.000000 s hg38.chr19_GL949748v2_alt 184219 211 + 1064304 CGCATGGC-CCAGGGGGACGT------CCAGGAGGTGCTGCCCA-TCTAGGCGCTGGCGGGCTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCGGCCTCTGAGTGATGCT-GAGGGGTCAGGCTGTCTCCAGAGAGCACCGGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATGAGGCGACTGGTA--- s panTro4.chr19 59116763 211 + 63644993 CACATGGC-CCAGGGGGACGT------CCAGGAGGTGCTGCCCA-TCTAGGCGCTGGCGGGCTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCGGCCTCTGAGTGATGCT-GAGGGGTCAGGCTGTCTGCAGAGAGCACCGGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGACGAGGCGACTGGTA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995131 211 + 60714840 CACAGGGC-CCAGGGGGACGT------CCGAGAGGTGCTGCCCA-TCTAGGCGCTGGGGGGTTG---------GGAGCCCCTCGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGCCTCTGAGTGACGCT-GAGGGCCCAGGCCGTCTCCGGAAAGCACCAGTGATCCCGGCTGTGCTGAGAGGGGGGACTGAGGGCTGTCTGGAC-GCCCCTGAGATGAGGCAACTGGTA--- i ponAbe2.chr19 I 114 C 0 s nomLeu3.chr10 102763887 212 - 106955855 CACAGGGC-CCAGGGGGACTT------CCGGGAGGTGCCGCCCATTCTAGGTGCTGGGAGATTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCAGCCTCTGAGTTACGCT-GAGGGCTTAGGCCGTCTCCAGAGAGCACCAGCGATCCTGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAT-GCCCCTGCGATGGGGCGGCTGGTA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051516 187 + 64156825 CACAGGGC-CCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAACCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077031 187 + 59248254 CACAGGGC-CCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAACCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179191 184 + 51301725 CACAGGGC-CCAGGAGGAAGT------CCG---GG-----------------------GGGTTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCGGAGATAAGGCGACTGGTA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884527 188 + 50890351 CACAGGGCACCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAGCCCCTTGTCC-CGGTCAATGCAGAGCTGTCAAAACCGGC--CTGAGTGACACT-GGGTGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467752 208 + 49145316 CACAGGGC-CCAGGAAGAAGT------CGGGTATGTGCTGCCCA-CATAGGCACTGGGGGGTTG---------GGAGCTCCTTGTCC-TGATCAATGCAGAGCTGTCAGATCTGGC--CTCAATGATGCTGGGGGGGTCAGGCTGTCTCCAGTGAGCTCCAGCGAGCCCAGCTGTGCT--GAGGGAGGGCTGTGGGCTGCCTGTGC-GCCCCTGAGAGGAGAGGATTGGTA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3716690 221 + 145441459 CACATAGC-CCAGTGTGAAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCT-TGTGCAGAGCAAATCTGTCATAGTTGATGTCAGAGAAACACT-GCAGGGTGAGGGTCATTCCAGGGTCCA-----GGATATGGCCTTGGTGAGTCAGCAGA--GAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCTA--- i mm10.chr7 C 0 T 4822 s canFam3.chr1 103000407 208 + 122678785 CACAGGGT-CCAGGGGGAAGT------CGGGGCTGGGTTGACCA-TCCAGATGCTGGGCAGGTC---------TGAGCTCCTCATCCTTGGTCAGAGCGAATCTATCAAAGCCAGCTTCTGAGCGACACT-GCAGGGTCAGGTTTTCTCCAGAATGAACCAGTGAGCCCGGCTGGGCCATGAG-------TGAAGGCTCCCTGTAG-GCACCTGCATGGAAGGGCACAGTGACA i canFam3.chr1 C 0 C 0 a score=381315.000000 s hg38.chr19_GL949748v2_alt 184430 153 + 1064304 TTTAGGGGATGCGTACTCTC-TGGGGCCCGCTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACTGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC s panTro4.chr19 59116974 153 + 63644993 TTTAGGGGATGCGTACTCTC-TGGGGCCCGCTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACTGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995342 140 + 60714840 TTTAGGGAATGCGCACTCT-----------CTGGGGCCTGCAGGGAGAGCTCG---CGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACCGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764099 141 - 106955855 TTTAGGGGATGCGCACT-------------CTGGGGCCTGCAGGGAGAGCTCTCACTGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCCGGCCCAAG-AGGTCGGGGTCACCGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051703 141 + 64156825 TTTAGGGGATGCACACTCT-----------CTGGGGCCTGCAGGGAGAGCGCCCA-CGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTCGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077218 141 + 59248254 TTTAGGGGATGCACACACT-----------CTGGGGCCTGCAGGGAGAGCGCCCA-CGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTCGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179375 142 + 51301725 TTTAGGGGATGCACTCTCT-----------CTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTTGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884715 144 + 50890351 TTTAGGGGATGCACTCTCT-----------CCGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAACGTCGGGGTTACTGACCACCCTGTGTC-TGCCTAAGGCTTCCCTGGACACACAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467960 130 + 49145316 TTAAGGGGATATACTCTGT----------------------GGGGATAGTTCTCA-CAGTCTCAGCTCCATGTCTTCTGCC-TGTGGTTCTGGCCCAAG-AGGTCAGTGTCACCAACCACCCTGTGTC-CACCTGAGGCTTCCCTGGACACACAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 103000615 146 + 122678785 CTGAGGGGACCCAGACCCACATTGGGC---CCAAGGCCTACATGA--AGCTACCGTGGGTCCC--TCCCAAAGCCTCCAACCTGTAGTTCTGGCCCTAGGAGGCCAGTGTCAT---CCAGCCTGCATCACTCCCAGGGCTCTATTGGGCATATGGC i canFam3.chr1 C 0 I 1210 e mm10.chr7 3716911 4822 + 145441459 T a score=10476.000000 s hg38.chr19_GL949748v2_alt 184583 3 + 1064304 AGG s panTro4.chr19 59117127 3 + 63644993 AGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995482 3 + 60714840 AGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764240 3 - 106955855 AGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051844 3 + 64156825 AGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077359 3 + 59248254 AGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179517 3 + 51301725 AGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884859 3 + 50890351 AGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468090 3 + 49145316 AGG i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103000761 1210 + 122678785 I a score=1216363.000000 s hg38.chr19_GL949748v2_alt 184586 442 + 1064304 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTCACGGTCCCCAGCAGTGCAGATGAATTAGACCATTGAG-CCACAGAGCCTGGAGGGCAGATGGGTGTGCT-GGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTTCCCCAGGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCACATTTGAGTCAAAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTCATCCA-GGGGTGACCCTTGTTCTAGCACATGAGGCTGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AAGCCCCTTCCATGTCCTGAG-CTCTGTAAT- s panTro4.chr19 59117130 441 + 63644993 GAGATGGGCAATGAGGGTGGGG-TTGTGGCCCTGCCTGTCACGGTCCCCAGCAGTGCAGATGAATTAGACCATTGAG-TCACAGAGCCTGGAGGGCAGATGGGTGTGCT-GGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTTCCCCAGGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCACATTTGAGTCAAAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTCATCCA-GGGGTGACCCTTGTTCTAGCACATGAGGCTGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCC---------------AGAGGC---------------AAGCCCCTTCCATGTCCTGAG-CTCTGTAAT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995485 434 + 60714840 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTTACGGTCCCCAGCAGTGCAGGTGAATTAGACCACTGAG-CCACAGAGCCTGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTCGCTCTGCTGCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCGTATTTGAGTC-AAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTTATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCAC--TTCTAATTCT---------------AGAGGC---------------AGGTCCCTTCTGTGTCCTGAG-CTCTGTAAT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764243 384 - 106955855 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTCACCGTCCCCAGCAGTGCAGATGAATTAGACGACTGAG-CCACAGAGCCTGG-GGGCAGGT-GGCATGCTAGGCATAAGGAGCCCTGGGCTCTGTGTTGCAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCC-GGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGA-------------------------------------------------CCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCA--------CGAGGCTAGAG----AGGGCAGGGCCTTAGGACACAGCC----CACTGTTCTCATTCT---------------AGAGGC---------------AAGCCCCTTCCGTGTCCTGAG-CTCTGTAAC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051847 423 + 64156825 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAA-CCACAGAGCGTGGGGGTCAGATGGGCGTGCTGGGTATTAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGGGAT- i rheMac3.chr19 C 0 I 292 s macFas5.chr19 55077362 423 + 59248254 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAA-CCACAGAGCATGGGGGGCAGATGGGCGTGCTGGGTATTAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCAGTGGCCTTGCAGGAAGGGAACAGCCCCTCCCCCAGGGCCTTGCCCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TAAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGGGAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179520 421 + 51301725 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAG-CCACAGAGCATGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCTGGGCTC--TGTTACAGgtcatgtgt-tctcatcagtGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACCTTTGACTC------------CCCCAagc-----tctgcctgcctccacctcaccCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAACTCC---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGTAAT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884862 413 + 50890351 GAGATGGGCAATGAGGGTGGAGGTTGTGACCCTGCCTGTCATGGTCCCCAGCAGTGC---------AGACCACTGAG-CCAC--AGCATGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCCGTGGCCTTGCAGGAGGAGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCGCTTC-GTGTCCTGAG-CTCTGTAAT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468093 419 + 49145316 GAGATGGACAATGA-AGTGGGGCTTGTGGCCCTGCCTGTCATGATCCCCAGCAGTGCAGATGAATTAGACCATTGAGCCCACAGAGCCTGGAGGGCAGATGGGTGCACTGGGTGCAAGGAGTCCCGGACTC--------------TGTGT-TCTCACCAGTGGCCTCGAAGGAGGGGAAAAGCCCCTACCCCAGGGCCTCGCTCTGCTTCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCT-GGGGCCTTTCAGACCACATTTGGGTC-ACGTTTGACT-CCCCATGC-----TCTGCCTGCCTCCACCGTGCCCAACCCAAATCCA--GGGTGACCCTTGTTCTAGCACA------CGAGGTCAGAG----AGGTCAGGGCCTCAGGACACAGCCCAGTCACGGTTCTAATTCT---------------AGAGGC---------------AAGTGCCTTCTGTGTCCCGAG-CTCTGCAAC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 103001971 447 + 122678785 GAGAAGGACAGTGAGGTTCAGGGTGCTGGTGCTGCTTCCCATGGTCCCCAGAGGTGCAGACAGCTTATAAAGT-----CCTCAGAGCCTACAAGATGGACAGATACTCAGGGGGTGACAGGGCCCAGGCCCTGTGTTCCCCGTCACGGGTCTCTCATGAGCAGCCTCACAG-------------CCCTGCCTAGGGCCTTGCTTTGCTCTCCCTGAAGGGTGGCCCCACAG---CAGAAATCCCT-GGGACCTTGCAGACCAGATGTGAGTC-----------TCCCCAGACCCCATTCCCTCTACCTTTTCCTCACAGATCCCATGTCCAAAGAGTGGCCATCGTACCAGGTCT------CCAggctggggaggtagggcagggcct-gggagccagtccaatgtcagttccagttctgcccctgcctgtcacagaggctgtgtgacccgggctgagacacttccctttcctgagtttctgtAAAT i canFam3.chr1 I 1210 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=389133.000000 s hg38.chr19_GL949748v2_alt 185028 139 + 1064304 GCA-------TCTTTTCTTTCATGAGCCTTGCGATCAGGCGATGTTTATTCAGTGGTTACCACATCCAGGCATGCTGCCAG-----GAGGAGGGGAGTCGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACAGAGCCTGGGTTAAT---GA s panTro4.chr19 59117571 139 + 63644993 GTA-------TCTTTTCTTTCATGAGCCTTGCGATCAGGCGATGTTTATTCAGTGGTTACCACATCCAGGCATGCTGCCAG-----GAGGAGGGGAGTCGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCCTGGGTTAAT---GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995919 142 + 60714840 GCA-------TCTTTTCTTTCATGAGCCTCACGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccag-----gaggaggggagtcttgggtgaagctgataggattcct-gctggactcacagagctTGGGTTAATGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764627 142 - 106955855 GCA-------TCTTTTCTTTCGTGAGCCTCGCGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccgg-----gaggaggggagtcatgggtgaagctgataggattcct-gctggactcacggagcttGGGTTTATGAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60052562 140 + 64156825 GCA-------TCTTTTCTTTAATCAACCTCGCGATCAGGCG--GTGTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i rheMac3.chr19 I 292 C 0 s macFas5.chr19 55077785 140 + 59248254 GCA-------TCTTTTCTTTAATCAACCTCGCGATCAGGCG--GTGTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179941 140 + 51301725 GCA-------TCTTTTCTTTCATCAGCCTCGCGATCAGGCG--GTTTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46885275 140 + 50890351 GCA-------TCTTTTCTTTCATCAGCCTCGCAATCAGGCG--GTTTATGGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGGGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACAGAACTTGGGTTACTGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468512 142 + 49145316 GCA-------TCTTTTCTCTCATCAGCCTCATGATCAGAAGAAGTTTATTGAGCAA--GCCACATCCAGGCTTGCTGCCGGAAGGAGGGGAGGGGAGGGGTGGGTGAGGCCGGTAGGATTCCT-GCTGGACTCATGGAGCTTGCGTTAATGA--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 103002418 144 + 122678785 GCAAATTTTTTCCTTCCTTCTACGAGGCTGGCAATCAAGCA-TGTTTAGTGAGAAGTCATCATATCCAGTCATGGTCCCCA-----GCACTGGAGATTCATTGTTGAGG-TGACACACTCCTTCCCTGGACTCAT-GTGCTGTGATTAGTGA--- i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=1583869.000000 s hg38.chr19_GL949748v2_alt 185167 718 + 1064304 ------CACATTACCCATGTTTA-GATAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTACACCT---GTCATGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGTGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGGAAGCTGGGACCTTGTCATTCAGGGGACTTGTGCACCGTGAAGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCCggcccggcacggtggtttgcacctgtaatcccagcactttgggaggcggaggtgggtggattatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctc--tactaaagacacaaaaaatcagccaggtgtggtggtggacgcct-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccgagattgcgccacagcactccagc-ctaggtgacagagtgagactccatctcaaa-------------------------------aaaaaaaaaaaa-----------aaaaCCGGGGAATCTTTAGAAAGCACAGTGGAAACAGATGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTCACTAATGGTTAACCATAACCACACTCC s panTro4.chr19 59117710 723 + 63644993 ------CACATTACCCATGTTTA-GATAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTGCACCT---GTCACGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGTGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAAAGTGAGCCAAAGGAAGCTGGGACCTCGTCATTCAGGGGACTTGTGCACCATGAAGATTTATTGGATGC----TGTTTAAGAAAATGGAAAATCCggctgggcacggtggttcacacctgtaatcccagcactttgggaggcggaggtgggtggattatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctg--tactaaagacacaaaaaatcagccaggtgtggtggtggaagccgagtag--ccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatcgcgccacagcactccagc-ctaggtgacagagtgagactccatctcaaa-----------------------aaacaaacaaacaaaaaaaa-----------caaaaCGGGGAGTCTTTAGAAAGCACAGTAGAAACAGATGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTCACTAATGGTTAACCATAACCACACTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996061 719 + 60714840 ------CACATTACCCATGTTTA-GATTGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTGCACCT---GTCATGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGGGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGGAAGCTGGGACCTTGTCATTCAGGGGACTTGTGCACCATGAAGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCTggccgggcgcggtggttcacacctgtaatcccagcactttgggaggtggaggtgggtggattacgaggtcaggagttcgagaccagcctggccaacatggtgaaactccatctc--tactaaagacacaaaaaatcagccaggcgtggtggtggacgtgt-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccggaaggtggaggttgcagtgagccgagatcgcgccacagcactccagc-ctaggtgacagagtgagactccgtctcaa--------------------------------aaaaaaaaaaaa-----------aaaaagaGGGAATCTTTAGAAAGCACAGTAGAAACAGGTGTCTGTTTTTACAAGCCCATCACTGTGCACAGAAGGCAATATGGGAGGGTTTTACTAATGGTTAACCATAACCACACTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764769 747 - 106955855 ------CACATTACCCATGTTTA-GATAAGAGGTAATTCTGCGCCGGTTTCA----------ACAAGTTGTAGGAAA-----------AAAAACATG----CTCAT---AGGTGAGCAGCGTGCACCT---GTCACGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGATGTGAACAGCGAGTGTG-------GCGCGCGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGATGGGACCTTGTCATTCAGGGGACTTGTGCACCATGAGGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCCAgccgggcgcggtggttcacacctgtaatcccagcactatgggaggtggaggcgggtggattacaaggtcaggagttcgagaccagcctggccagcatggtgaaaccccgtctctatactaaagacacaaaaaattagccaggcgtggtgatggatgcct-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaaaccaggaggtggaggttgcagtgagccaagatcgcgccacagcactccagcactaggtgacagagtgagactccgtctcacaaaaaaaaacaaaaaaaaaaaacaaaacaaacaaacaaaaaaaa-----------aaaaaCAGGGAATCTTTAGAAAGCACAGTAGAAACAGGTGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTTACTAATGGTTAACCATAACCACACGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60052702 716 + 64156825 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATACGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtaatcctagcactttgggaggtggaggtgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaaaaattaaccaggcgtggtggtggacacct-ggaatcccagctgctttggaggctaaggcaagagaatcactggaacccaggaggcggagtttgcagtgagccgagattgtgccacagcgctctagc-ctgggcgacagagtgag-ctccgtctcaaa-------------------------------aaaaaaagaaaa----------------TGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTCTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACGGTTAACCATAACCACACTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077925 717 + 59248254 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATACGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtaatcctagcactttgggaggtggaggtgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaaaaattaaccaggcgtggtggtggacacct-ggaatcccagctgctttggaggctaaggcaagagaatcactggaacccaggaggcggagtttgcagtgagccgagattgtgccatagcgctctagc-ctgggcgacagagtgagactccgtctcaaa-------------------------------aaaaaaagaaaa----------------TGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTGTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACGGATAACCATAACCACACTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180081 725 + 51301725 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGtaggaaagg-------aggaaaacatg----CCCATAGCAGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGTGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATATTATACGTTTAAGAAAATGGGagatctggctgggcgcagtggttcacacctgtaatcctagcactttgggaggcggaggcgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaacaattaaccaggcatggtggtggacacct-ggaatcccagctgctttggaggctgaggcaggagaatcactggaacccgggaggcggagtttgcagtgagctgagattgtgccacagcactctagc-ctgggcgacagagtgagactccctctcaaa-------------------------------aaaaaaaaaaaa--------aggaaaatgggggAATCTTTAGAAAGCACAGTAGAAACAGACGTCTCTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACAGTTAACCATAACCACACTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46885415 733 + 50890351 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCAGTTTCA----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCATGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGATCTGAGAGTGAGCCAAAGAAAGCTAGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATATGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtagtcctagcactttgggaggcggaggcgggcggattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccctctc--tactaaagatacaaaaaattaaccaggcgtggtggtaggcgcct-ggaatcccagttgctttggaggctgaggcaggagaatcactggaacccgggaggcggagtttgcagtgagctgagatggtgccacagcgctctagc-ccgggcgacagagtgagactccgtctcaaa-------------------------------aaaaaaaaaaaagaaagaaaaaagaaaATGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTGTTTATACAAGCCCAACAC--TGCACAGAATGTAATAT-GGAGGGTTTTACTGACGGTTAACCATAACCACACTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103002562 424 + 122678785 CCAACAGACAATACAAATATTTAGGGGAGAAAACAATTCTACTATGGTCTAATAAGAGTCTTCCAAGTTGGAAGAAAAAAGAAAACAGGGAACCATGAGATTCGGTAACATGTAGATGTCATACAACCTGGGTCCTGGTCATGAGAGGTCCTTCTAGGGGATGGAATGATGGAAGGCACAAGCCAGGGGTATGCAGAGACGAGAGTGGGGGACATCCTCAACCAGAAAGATCTTGAGCTGTTCTCAGAACCGAGAGTGATC---AGGAGGCCAggaccttgtcacgca-ggattttgagccccaag------------------------taagca-------------------------------------------------tttggga------------------------------------------------------------------tttc--tact---------------------------------------t------------------------taaggcaatgggaagattttaacc----------------------------------------------agc-------------------------------------------------------------------------a------------------gagagtc-----------------aaacaaatttctgtctggaaaagactaACAC--TGTAAGAAAT------------------ACTGACAATTA---GTAGTAAAATTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468654 0 + 49145316 C a score=113253.000000 s hg38.chr19_GL949748v2_alt 185885 42 + 1064304 AGCGTGAGCCCAGCCACTAGGCAATGTGCTGATAAGGATTCT s panTro4.chr19 59118433 42 + 63644993 AGCGTGAGCCCAGCCACTAGGCAATGTGCTGATAAGGATTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996780 42 + 60714840 AGCGTGAGCCCAGCCGCTAGGCGATGTGCTGATAAGGATTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102765516 42 - 106955855 AGTGTGAGCCCAGCCGCTAGGCGATGTGCTGATAAGGATTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053418 42 + 64156825 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55078642 42 + 59248254 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180806 42 + 51301725 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886148 42 + 50890351 ATTGTGAGCCCCACCGCTAGGTGACGTGCTAATAAGGAGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468654 42 + 49145316 AGTGTGAACCCAGTTGCTAGGTGATATGCTGATCAGGAttct i calJac3.chr22 C 0 I 1844 s canFam3.chr1 103002986 34 + 122678785 AGCATTCATGTGGTCTCTGGGT--TGTGCTGATCAG------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=1145860.000000 s hg38.chr19_GL949748v2_alt 185927 501 + 1064304 AAGTGGTTTATGTGGACTCCTCATG-ACCTATGACAC-ACATACGTTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTCTCTTTGTCATAGTCTAC----------CAGCTCTGCAGAGGTG-TCAGCTACATCCGGATTGGCTCAGGGAGCGG-CCGTCAGAAGACTT-ACACGTGTTTAATAACTGAGGTTGTGTGTGTGTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACATGAAGTACAGGAACGTGCATCTTATTTTTGGAAGATGGAGCCCCGTTGGGGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATGGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGGT-GCAGTG-CACAGACAGGG-CGTCCTCGGTCCCCAGCTGAGCT s panTro4.chr19 59118475 495 + 63644993 AAGTGGTTTATGTGGACTCCTCATG-ACCTATGACAC-ACATACGTTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATAGTCTAC----------GAGCTCTGCAGAGGTG-TCAGCTACATCCGGATTGGCTCAGGGAGCGG-CCGTCAGAAGACTT-ACATGTGTTTAATAACTGAGGTTGTGTGTATGTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCA------CAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGCATCTTATTTTTGGAAGATGGAGCCCCGTTGGAGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATGGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGGT-GCAGTG-CACAGACAGGG-CGTCCTCGGTCCCCAGCTGAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996822 498 + 60714840 GAGTGGTTTACGTGGACTCCTCATG-ACCTGTGACAC-ACATACATTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATAGTCTAC----------AAGCTCTGCAGAGGTG-TCGGCTACATCCAGATTGGCTCAGGGAGCGG-CTGTCAGAAGACTTAACACTTGTTTAATAACTGAGGTGGTGTGTGTCTGGCAGGGAG--CGGGTAAC--TGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAA--GTATCAGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTTTGGAAGATGGAGCCCCATTGAAGGAATTTGAGCCGT-----GGAGGGTCACAGCCAGGTCAGATTGTCAGAAGAGGCCTT------GGAAGTGATGAGAGGGATGGGCTGGAGTAGGGATGGGAGCCAG--TA-GGGGCCAGGAGGGAGGCTGAT-GTAGTG-CACTGACAGGGCCGTCTTCGGTCTCCAGCTGAGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102765558 500 - 106955855 AAGTGGTTTACGTGGACTCCTCATG-ACCTGTGACAC-ACATACATTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATCGTCTAC----------GAGCTCTGCAGACGCG-TCGGCTACATCCAGATCGGCTCAGGGAGCAG-CCATCAGAAGACTT-ACACGTGTTTAATAACTGAGGTTGTGTGTGTCTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACGTGAGGCACA-GAACGTGAATCTTATTTTTGGAAGATGGAGCCCCGTTGAAGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGAT-GCAGTG-CACAGACGGGG-CGTCCTCCATCTCCAGCTGAGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053460 492 + 64156825 CAGTGGTTTGTGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAGTGGAATGAGGCAGGAGGGCTTGTCTTTATCATTGTCTAC----------GAGCTCTGCAGAGGCGCCCGGCTACATCCAGATTGGCTCAGGAAGCAG-CCATCAGAAGACTT-ACCAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGAGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCCCTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCCTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGAGGCCAGGAGGGA-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTTGGTCTCCAGCTGAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55078684 492 + 59248254 CAGTGGTTTGTGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAGTGGAATGAGGCAGGAGGGCTTGTCTTTATCATTGTCTAC----------GAGCTCTGCAGAGGCGCCCGGCTACATCCAGATTGGCTCAGGAAGCAG-CCATCAGAAGACTT-ACCAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGAGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCCGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGAGGCCAGGAGGGA-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTTGGTCTCCAGCTGAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180848 502 + 51301725 AAGTGGTTTGCGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAATGGAACGAGGCAGGAGGGCTTGTCTTTATCATCGTCTACGAGCTCTGCAGAGCTCTGCAGAGGCG-TCGGCTACATCCAGATTGGCTCAGGAAGCAG-TCATCAGAAGACTC-ACAAGTGTTCAATAAcggagggtgtgtgtgtctggcAGGGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCTGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGGGGCCAGGAGGGA-GCTGACGGCAGTG-CACAGACAGGG-CGTCCTCGGTCTCCAGTTGAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886190 491 + 50890351 GAGTGGTTTGCGTGGTGTCCTCATG-ACCTGTGACAC-AAACATGTTTGCAGTTGAGTGGAACGAGGCTGGAGGGCTTGTCTTTATCATAGTCTAC----------GAGCTCTGCAGAGGCG-TCGGCTACATCCAGATTGGCTCAGGGAGCAG-TCATCAGAAGACTT-ACAAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGGGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCTGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGGCGGG---------AG--TAGGGGACCACGAGGGG-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTCGGTCTCCAGCTGAGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103003020 463 + 122678785 --------TATTTAAGCCTCACATGAACCTATCATACAAAACACATGTACAGTTGAGCAGAACGAGCCAGGATGGCTTCTCC--------ATCTGG----------CAGGT-TGGGGAGGAG-TTGGCCAGGTTCAGATTGGCTAAGGAGACAGCCCGAGAAAAGGCGT-GGAATTGTTGAGTAGCTCAGTGTGTGT-TGCTTGGGAAGGTATTTGGGTGAGAGGGGAGTTGTGTTTGCTGGGGC-------------TAGTGGGTTTAGC-----------TCTGGCCTGATGGTC-ACAGCCTTAAAGATGAGATAGTGCAACTTATATC---TTTCTGAAGGAGAG-----TGTGGGAGGGTTTTGAGCATCCCACAGGATGAGCCCAGCCTGGTGA-----TTAGTAGGGTCTTCTAATCTAGAGGTGGTGAGAGGAATGCAATGGGGAGAGG---GGGGCCTGCTTGGAGGAGCAGTGGGGAGGCTGAT-CTGCTGACGCACACAGA--CTTCTTGAGTCTTGCGATGGGTT i canFam3.chr1 C 0 I 48 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=267639.000000 s hg38.chr19_GL949748v2_alt 186428 115 + 1064304 TAGACTGTGGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGTGGGCAGAGAGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC s panTro4.chr19 59118970 115 + 63644993 TAGACTGTAGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGTGGGCAGAGAGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997320 112 + 60714840 TAGACTGTGGGGATGGACCAGCGGGACACGGGTGGAGCCGGGTGACGAGGGATGGGGAC----CGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766058 114 - 106955855 TAGACTGTGGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGGGGGCAGCGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAA-AGTGTGA-------GGAGTTTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053952 115 + 64156825 TGGACTGTGGGGATGGACCAGG-GCACATGGGTGGAGCCAGGTGAGGAGCAATGGGGGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55079176 110 + 59248254 TGGACTGTGGGGATGGACCAGG-GGACATGGGTGGAGCCAGGTGAG-----ATGGGAGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47181350 115 + 51301725 TGGACTGTGGGGATGGACCAGG-GGACACGGGTGGAGCCAGGTGAGGAGCAACGGGGGCAGAGTGGTTTGAATTTGTTCAGTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886681 115 + 50890351 TGGACTGTGGGGATGGACCAGG-GGACACGGGTGGAGCCAGGTGAGGAGCGACGGGGGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19724006 107 - 122678785 -TGACTGTGGTGATGG-------TCGCATTAATGGA-----ATGAG--GGCTCCCGGGCAGAACTGTGTGGAGTCG-TCATCGTGTGTCATGTAGAAGGGTGTGAAGCACGGAGAGCTCTCTC i canFam3.chr1 I 64854 T 23254 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=433570.000000 s hg38.chr19_GL949748v2_alt 186543 182 + 1064304 ACTCTCTGCCTTGGTTGATGGGAGGAACCAGTGGGGCTGCCGCAGGACAGACGACCCGCGTGGGAGAAGGAGGCTCGGGGAGATGTTTCTAAGAC--TTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------CTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt s panTro4.chr19 59119085 182 + 63644993 ACTCTCTGCCTTGGTTGATGGGAGGAACCAGTGGGGCTGCCGCAGGACAGACGACCCGCGTGGGAGAAGGAGGCTTGGGGAGATGTTTCTAAGAC--TTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------CTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997432 184 + 60714840 ACTCTCTGCCTTGGTCGATGGGAGGAGCCAGTGGGGCCGCCACAGGACAGACGACCTGCGTGGGAGAAGGAGGCTGGGGGAGATGTTTCTAAGACTGTTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTTCCCAGACAGATCCCTTCACTGACtttc-tttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766172 184 - 106955855 ACTCTCTGCCTTGGTTGATGGGAGGAGCCAGTGGGGCCGCCGCAGGACAGATGACCCGCGTGGGAGAAGGAGGCTGGGGGAGATGTTTCTAAGACTGTCAACTTGCTCACAGAGGGAAGCACGA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60054067 182 + 64156825 ACTCTCTGCGTTGGTTGATAGGAGGAGCCGGTGGGGCCGCCACAGGACAGACGGCCCGCATGGGAGAAGGAGGCCTGGGGAGGTATTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTCAAGCCTGGG---------TTTTGTTTCCCCAAACAGGTGCCTTCCCTGACtttcttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55079286 181 + 59248254 ACTCTCTGCGTTGGTTGATAGGAGGAGCCAGTGGGGCCGCCACAGGACAGACGGCCCACATGGGAGAAGGAGGCCTGGGGAGGTATTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTCAAGCCTGGG---------TTTTGTTTTCCCAAACAGGTGCCTTCCCTGACTGAC-tttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47181465 178 + 51301725 ACTCTCTGCTTTGGTTGATAGAAAGAGCCAGTGGGGCCGCCACAGGACAGACGACCCGCATGGGAGGAGGCGGCCTGGGGAGGTGTTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTTGAGCCTGGG---------TTTTGTTTCCCCGAACAGGTGCCttccctgact----tttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886796 179 + 50890351 ACTGTCTGCGTTGGTTGATAGGAGGAGCCGGTGGGGCCGCCACAGGACAGGCGACCCGCGTAGGGGGAGGAGGCCTGGGGAGGTGTTTCTAAGACCGTT---TCGCTCACAGA--GAAGCACAA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTCCCTGAACAGGTGCCTTCCCTGACtttc-tttttt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103003531 188 + 122678785 ACTCTCTGTCT--GGTGCCTGGAGGAGCCAGTGGGGCCATCCCAGGA-GGATGATCCA---GGAAAAGGCAGGGACTGGGAGGTGATTTGAAGACAGATCATCATTTCTCAGAAGGAAGCATGACCCTTCCTCCTACCCTGGGATTGTGGATTTTCTTTGTACCCCACACTTCCCTTCACTGACTTCC-TTATTT i canFam3.chr1 I 48 T 5795 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=89658.000000 s hg38.chr19_GL949748v2_alt 186725 37 + 1064304 ------gagacggagtctcgctctgtcgcccaggctggagtgc s panTro4.chr19 59119267 37 + 63644993 ------gagacggagtctcgctccgtcgcccaggctggagtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997616 37 + 60714840 ------gagacggagtctcaatctgtcgcccaggctggagtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766356 37 - 106955855 ------gagacggagtctcgctctgttgcccaggctggagtgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60054249 43 + 64156825 tttttagagacggattctcgctctgtcgcccaggctggagtgc i rheMac3.chr19 C 0 M 651 s macFas5.chr19 55079467 43 + 59248254 tttttagagacggattctcgctctgtcgcccaggctggagtgc i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47181643 43 + 51301725 ttttttgagacggagtctcgctctgtcacccaggctggagtgc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46886975 43 + 50890351 ttttaagagacggagtctcgctctgtcccccaggctggagtgc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I a score=910.000000 s hg38.chr19_GL949748v2_alt 186762 1 + 1064304 a s panTro4.chr19 59119304 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997653 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766393 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46887018 1 + 50890351 a i chlSab2.chr6 C 0 I 10 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e papAnu2.chr19 47181686 1 + 51301725 I e macFas5.chr19 55079510 1 + 59248254 I e rheMac3.chr19 60054292 651 + 64156825 M a score=646446.000000 s hg38.chr19_GL949748v2_alt 186763 588 + 1064304 gtggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatcttttgtatttttagtagagacggggtttcaccgtgctagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccatcgcgcccagccAACTTTCCTGTTAATGAGTAGCA--CTCTTTTtttctttcttttctttcccccttttttttttttttt-----agacatggtcttgctctgtttcccaggctggagtgcagtggcgtgaccccagctcactacaacctccacctcctgggttcaggtgattgtcctgcttcagcctcccaagtagct-ggattacaggcacgtgcaaccacgcctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctattctcgaactcctgaccttaaatcatcctcttgccttggccccccaaagtgttaggattacaggcatgagccatcatgctcggc s panTro4.chr19 59119305 580 + 63644993 gtggcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatcttttgtatttttagtagaggcggggtttcaccgtgttagccaggatggtctcaatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccAACTTTCCTGTTAATGAGTAGCA--CTCTTTTtttctttcttttctttcc-----tttttttttcttt-----agacacggtcttgctctgtttcccaggctggagtgcagtggcgtga---cagctcactacaacctccacttcctgggttcaggtgattgtcctgcttcagcctcccaagtagct-ggattacaggcacgtgccaccatgcctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttgaactcctgaccttaaatcatcctcttgccttggccccccaaagtgttaggattacaggcatgagccatcatgcttggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997654 573 + 60714840 gtggcgcgatctcggctcactgcaagctccgcttccggggttcacgccattctcctgcctcagcctccggagtagctgggactacaggcacccgccaccacgcccggctaattttttgtatttttagtagagacagagtttcactgtgttagccaggaaggtctcaatctcctgacctcatgacctgcccgcctcggccttccaaagtgctgggattacaggcatgagccactgcgcccagccAGCTTTCCTGTTAATGAGTAGCACTCTCtttttttctttctcttctttcctttcttttttttttttttttaaaagacatggtcttgctctgtttcccaggctggagtgcagtggcgtgatctcagctcactacaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggcacgtgccaccacgcctcactaatttttgtatttttagtagagacggagtttcaccatgttggccagcctgttcttaaac----------------------tgccttggcctcccaaagtgttaggattacaggcatgagccaccatgcttggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766394 518 - 106955855 gtggcgcgatctcggctcactgcaagctccacctcccaggttcac-ccagtctcctgcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcccggctaatgttttgtttcttcagtagagacagagtttcactgtgttagccaggatggtctcaatctcctgacctcgtgacccgcccgtctcggcctcctaaagtggt-ggattacaggcgtgaggcaccgcacccggccAACtttcct----------------------------------------------attttttttttta-----agacgcggtcttg--ctgtttcccagggtggatggcagtggcatgatctcagctcactaccacctccacctcctcggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggcacgtgccaccacgcctggctaatttttgtatttttagtagagatggagtttcaccatgttggccaggctgttctcaaac----------------------tgcgttggcctcccaaagtgttaggagtacaggcatgagccaccatgcttggc i nomLeu3.chr10 C 0 M 1151 s macFas5.chr19 55079511 568 + 59248254 gtggcgcgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccatgcccggctaa-tttttgtatttttactagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgattcgcctgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccAACTTTCCTGTTA--GAGTAGCA--Ctctctctt------ttttctt--------ttcttttttttca-----agacacggtcttgctctgtttcccatgctggagtgcagtggcatgatctcagctcactggaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggtgtgtgccaccacacctggctaatttttgtatttttagtagagac--agtttcaccatgttggccaggctgttctcgaactcctgacttcaattaatcctcttgccttggcctcccaaagtgttaggattacaggcgtgagccaccatgcttggc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47181687 578 + 51301725 gtggcacgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggaccacaggcgcccgccaccacgcccggctaattttttgtatttttactagagacggggtttcaccgtgttatgcaggacggtctcgatctcctgacctcgtgattcgcccgcctcagcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccaactttccTGTTA--GAGTAgca--ctctctcttt-tttcttttctt--------ttcttttttttca-----agacacaatcttgctctgtttcccatgctggagtgcagtggcgtgatctcagctcactggaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagctaagattacaggtgtgtgccaccacacctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctgttctcaaactcctgacttcaattaatcctcttgccttggcctcccatagtgttaggattacaggcgtgagccaccatgtttggc i papAnu2.chr19 I 1 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60054292 651 + 64156825 M a score=163217.000000 s hg38.chr19_GL949748v2_alt 187351 213 + 1064304 cTCTTTTttctttttctttttttttttttttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcagcctccacctcccaggtgccagcgattctcctgcctcaatctcccagttagctgggattacagatgcgcgccaccatatccagctaaattttgtattttttagtaaagacagag s panTro4.chr19 59119885 211 + 63644993 cTCTTttttctttttc--tttctttttttttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcagcctccacctcccaggttccagcgattctcctgcctcaatctcccagttagctgggattacagacgtgcgccaccatatccagttaaattttgtattttttagtaaagacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55998227 201 + 60714840 ctcttttttctttttc------------tttgtttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcgcgatctcagctcactgcagcctccacttcccaggttccagcgatgctcctgcctcaatctcccggttagctgggattacagatgcgcgccaccatgtctggctaaattttgaattttttagtagagatggag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55080079 197 + 59248254 ctcttttttctttttc----------------tttttgagatagagtcttgctctgtcacccaggctggagtgcagtggtgccatctcagctcactgcagcctccacctcccaggttccagcaattctcctgcctcagcctccctggtagctgggattacagatgcgcgccaccatgtccggctaatttttgtattttttagtagagatggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47182265 197 + 51301725 ctcttttttctttttc----------------tttttgagatagagtcttgctctgtcacccaggttggagtgcagtggtgccatctcagctcactgcagcctccacctcccaggttccagcaattctcctgcctcagcctccctggtagctgggattacagatgcgtgccaccatgtccggctaatttttgtattttttagtagagatggag i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60054292 651 + 64156825 M a score=687469.000000 s hg38.chr19_GL949748v2_alt 187564 541 + 1064304 ttttaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcttcagcctcccaaagtgttgggattacgggcatgagccaccatgctcggcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaggtgatcctcccgcctcaggctcccgag------------tggctgggactacagacgtgcacctccacagccactacttatttttgtaGCGatgtctatcagctggtgaatagag----aaagtgtggtatatccttacaacaaaatattattcaaccgtagaaaggaatgaagtactcatacatgctacatgtgtgaaccttgataatatactagataaaagcagtcaggaaaaaaaggtcacatatgacgttatttcatttataagaagtatccagcctgggtgtggtggctcattgcctgtaatccagcactttgggaggccaaggcaggtggattgcctgagtttaggagtt s panTro4.chr19 59120096 540 + 63644993 ttttaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgttgggattacgggcatgagccaccatgctcagcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaggtgatcctcccgcctcaggctcccgag------------tggctgggactacagacatgcacctccacagccactacttatttttgtaGCGatgtctatcagctggtgaatagag----aaagtgtggtatatccttacaacaaaatattattcaaccgtagaaaggaatgaagtactcatacatgctacatgtgtgaaccttgataatatactagataaaagcagtcaggaaaaaaaggtcacatatgacgttatttcatttataagaagtatccagcctgggtgtggtggctca-tgcctgtaatccagcactttgggaggccaaggcaggtggattgcctgagtttaggagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55998428 544 + 60714840 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagcgttgggattacgggcatgagccaccatgctcagcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaagtgatcctcctgcctcaggctcccgag------------tggctgggactacaaacatgcacctccacagccactacttatttttgtaGCaatgtctatcagttggtgaatagagaaacaaagtgtggtatatccttacaataaaatattattcaaccgtaaaaaggaatgaagtactcatacatgctacatgtgtgaaccttggtaatatactagataaaagcagtcaggaaaaaaaggtcacatacgacattatttcatatataagaagtatccaggctgggtgtggtggctca-cgcctgtaatccagcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i ponAbe2.chr19 C 0 I 1191 s rheMac3.chr19 60054944 556 + 64156825 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcggcctcccaaagcgttgggattatgggcatgagtcaccacacctggcctcttttttctttgctgaaaagaaaaggtttgttgcccaggctggagtgcagtggcactatcctagctcactgcagccttgacatcctgactcaagtgatcctcccgcctcaggctcccgagtggctgggactatggctgggactacagacatgcaccaccatagccacgacttatttttgtaGCaatgtctatcagctgatgagtagagaaacaacgtgtggtatatccttacaacaaaatcttattcaaccatacaaaggaatgacacactcacacatgctacacaggtgaaccttgataatatattagatgaaagcagtcaggaaaaaagggtcacatatgacgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtgggttgcctgagtttaggagtt i rheMac3.chr19 M 651 C 0 s macFas5.chr19 55080276 544 + 59248254 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcggcctcccaaagcgttgggattatgggcatgagccaccacacctggcctcttttttctttgctgaaaagaaaaggtttgttgcccaggctggagtgcagtggctctatcctagctcactgcagccttgacatcctgactcaagtgatcctcccgcctcaggctcccgag------------tggctgggactacagacatgcaccaccatagccacgacttatttttgtaGCaatgtctatcagctgatgagtagagaaacaacgtgtggtatatccttacaacaaaatcttattcaaccacacaaaggaatgacacactcacacatgctacacaggtgaaccttgataatatattagatgaaagcagtcaggaaaaaaaggtcgcatatgacgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47182462 544 + 51301725 tttcaccatgttggccaggctggtcttgaactcctgacttcagatgatccgcccgcctcagcctcccaaagcgttgggattacaggcgtgagccaccacacctggcctcttttttctttgcttaaaagATAAggtctgctgcccaggctggagtgcagtggcactatcctagctcactgcagccttgacatcctggctcaagtgatcctcccgcctcaggctcccgag------------tggctggggctacagacatgcactaccatAGCCACTACTTATTTTTGTAGCAATGTCTATCAGCTGATGAGTAGAGAAACAACGTGTGGTATATCCTTACAACAAAATCTTATTCAACCATACAAAGGAATGACATACTCACACATGCTACACAGGTGAACCTTGATAATATATTAGATGAAAGCAGTCAGGAAAAAAGGGTCACATATGACgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=508204.000000 s hg38.chr19_GL949748v2_alt 188105 587 + 1064304 tgagaccagcctgggcaacatggtgaaataccatctctaccaaaaatacaaaaaattcacccggcatggtggcatgtgcctgtgatcccagctacttgggaggctcaggtggcaggatcgcttgagcctgggaggcagaggttacagtgagccgagatcacaccactgcactccaacctgggtgacagagtgagtccctgtctc------aaaaaaaaaaaaaaaaggtattcaaagaaggccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgcttgatgtaaactcggtttccttctcggtatgataaaaatgtttcggaatgagatagaggtgatgcttacaccatattgtgaatttactaaatgccacaaaatAGAGTTGTATCTCAATAAAAATATATTTGTTGggccgggtgcggtggctcacgcctataatcccagcactttgggaggcaggcagatcaagaggtcaggagttcaagaccagcctggc---------aaaaccctgtctctactaaaaatataaaacttagccaggcgtggtggcatgtgtctgtaatcccagctactc s panTro4.chr19 59120636 602 + 63644993 tgagaccagcctgggcaacatggtgaaataccatctctaccaaaaatacaaaaaattcacccggcgtggtggtatgtgcctgtgatcccagctacttgggaggctcaggtggcaggatcgcttgagcctgggaggcagaggttacagtgagccgagatcacaccactgcactccaacctgggtgacagagtgagtccctgtctcaaaaaaaaaaaaaaaaaaaaaaggtattcaaagaaggccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgcttaatgtaaactcggtttccttctcagtatgataaaaatgtttcggaatgagatagaggtgatgcttacaccatattgtgaatttactaaatgccacaaaatAGAGTTGTATCTCAATAAAAATATATTTGTTGggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggcaggcggatgaagaggtcaggagttcaagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaacttagccaggcgtggtggcatgtgtctgtaatcccagctactc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60055500 591 + 64156825 agagaccagcctgggcaacatggtgaaataccacctctacc--aaacacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccatctacttgggatgctcaggaggcatgatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgggtgacagagtgaggccctgtctc---------aaaaaaaaaaaaaggtattcaaagaaagccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgctgaatgtaaactgggtttccttctcagtatgataaaaatgttttggaatgagatagaggtgatgcttacaacatattgtgaatttactaaatgccaccaaatagtGTTGTATCTCAATAAAAATATATTTGTTGggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggcatgtgcctgtaatcccagctactc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55080820 592 + 59248254 cgagaccagcctgggcaacatggtgaaataccacctctacc--aaacacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccagctacttgggaggctcaggaggcaggatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgggtgacagagtgagaccctgtctc--------aaaaaaaaaaaaaaggtattcaaagaaagccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgctgaatgtaaactgggtttccttctcagtatgataaaaatgttttggaatgagatagaggtgatgcttacaacatattgtgaatttactaaatgccaccaaatagtGTTGTATCTCAATAAAAATATATTTGTTGggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaatcagccaggtgtggtggcatgtgcctgtaatcccagctactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183006 595 + 51301725 cgagaccagcctgggcaacatggtgaaataccaccTCTACC--AAAcacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccagctacttgggaggctgaggaggcaggatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgagtgacagagtgagaccctgtctc-----aaaaaaaaaaaaaaaaaggtattcaaaGAAAGCCAATcgatagaggcagaaagtaggtTAATTGTTGCATGGGATTAGGTGGGAGTGATTGCTGAATGTAAACTGGGTTTCCTTCTCagtatgataaaaatgttttggaatgaGATAGAGGTGATGCTTACAACATACTGTGAATTTACTAAATGCCACCAAATAGtgttttatctcaataaaaatatatttgttgggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacaaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagccaactgtggtggcgtgtgcctgtaatcccagctactc i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=8864.000000 s hg38.chr19_GL949748v2_alt 188692 17 + 1064304 gggaggctgaggtagaA s panTro4.chr19 59121238 17 + 63644993 gggaggctgaggtagaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55081412 17 + 59248254 gggaggctgaggcagga i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47183601 17 + 51301725 gggaggctgaggcagga i papAnu2.chr19 C 0 I 10 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056091 0 + 64156825 C a score=7441.000000 s hg38.chr19_GL949748v2_alt 188709 87 + 1064304 TGGAGCGAGACTCCGTCTCAAAAAAAAatatatatatatgtaaatatatatatgttgggcatagtggtgcacacatgtagtcccagc s panTro4.chr19 59121255 85 + 63644993 cggagcgagactccgtctc--aaaaaaatatatatatatgtaaatatatatatgttgggcatagtggtgcacacatgtagtcccagc i panTro4.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47183618 10 + 51301725 I e macFas5.chr19 55081429 10 + 59248254 I e rheMac3.chr19 60056091 0 + 64156825 C a score=1083.000000 s hg38.chr19_GL949748v2_alt 188796 5 + 1064304 tactt s panTro4.chr19 59121340 5 + 63644993 tgctt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55081439 5 + 59248254 aacct i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47183628 5 + 51301725 aacct i papAnu2.chr19 I 10 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056091 0 + 64156825 C a score=77281.000000 s hg38.chr19_GL949748v2_alt 188801 122 + 1064304 gggaggctgaggcaggagaaccacttgaacctgggaagcggaggttgcagtgagccgagactgcaccattgcactcctgcctgggcaaaaagagtgaaactccatctcgaaaaaaaaaaaaa------------- s panTro4.chr19 59121345 121 + 63644993 gggaggctgaggcaggagaaccacttgaacctgggaagtggaggttgcagtgagccgagactgcaccattgcactcctgcctgggcaaaaagagtgaaactccatctcg-aaaaaaaaaaaa------------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60056091 135 + 64156825 gggaggctgaggcaggagcaccacttgaacctgggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaaaagaaaagaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081444 103 + 59248254 --------------------------------gggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaagaaaaaaaaaaagaaaagaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183633 102 + 51301725 --------------------------------gggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaag-aaaaaaaaaagaaaagaaaaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=348529.000000 s hg38.chr19_GL949748v2_alt 188923 323 + 1064304 CCACACACACACAC--GTAGATAAAATCAAAT---ATTctgtattccataaatatgtacaattattatttttcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcggagatgggaggctcttgagcccacaagtttgaggccagtttgggcaacatcgtgagatcccattgctacaaaaaaatttaaaaTATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctgtgttttcagttacctggtggtcaaccatggtccaaaaatattaaatagaaaa s panTro4.chr19 59121466 323 + 63644993 CCACACACACACAC--GTAGATAAAATCaaat---attctgtatgccataaatatgtacaattattatttgtcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcggagatgggaggctcttgagcccacaagtttgaggccagtttgggcaacatcgtgagaccccattgctacaaaaaaatttaaaaTATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttccttctgtgttttcagttacctggtggtcaaccatggtccaaaaatattaaatagaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102768084 326 - 106955855 CCACACACACACACTAGTAGATAAAATCaaataccattctgtatgccataaatatgtacaattattatttgtcaattaaaaa--CTTAAgctgggcacaatggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcagagatgggaggctcttgagtccagaagttcgaggccagtttgggcaacatagtgagaccccatctctacaaaaaaaTTTAAAATATATTTTTAAAAAACCCTAATAcagtagtccccctttatctgtaattttctttctgtgttttcggttacctggtggtcaaccatggtccaaaaacattaaatagaaaa i nomLeu3.chr10 M 1151 C 0 s rheMac3.chr19 60056226 312 + 64156825 CCACACATACACTA--GTAGATAAAGTCAAAT---ATTCtgtaccctataaatatgtacaattattatttgtcaattaaaaaCTCT------------------------------TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------------NNNNNNNTgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctatgttttcagtaacctggtggccaaccatggtccaaaaatattaaatagaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081547 323 + 59248254 CCACACATACACTA--GTAGATAAAATCAAAT---ATTctgtaccctgtaaatatgtacaattattatttgtcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggtggagatgggaggctcttgaacccaggagtttgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctatgttttcagtaacctggtggccaaccatggtccaaaaatattaaatagaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183735 323 + 51301725 ccacacatacACTA--GTAGATAAAATCAAAT---ATtctgtaccctataaatatgtacaattattatttgtcaattaaaaactcttaagctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggtggagatgggaggctcttgaacccagaagttcgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatatatttttaaaaaactctaatacagtagtccccctttatctgtaattttctttctatgttttcaGTAACCTGGTGGCCAACCAtgatccaaaaatattaaatagaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e chlSab2.chr6 46887019 10 + 50890351 I a score=3437.000000 s hg38.chr19_GL949748v2_alt 189246 5 + 1064304 gttaa s panTro4.chr19 59121789 5 + 63644993 gttaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60056538 5 + 64156825 gttca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081870 5 + 59248254 gttca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184058 5 + 51301725 gttCA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I a score=8220.000000 s hg38.chr19_GL949748v2_alt 189251 16 + 1064304 ggaatcataagttttt s rheMac3.chr19 60056543 16 + 64156825 ggaatcgtaagttttt i rheMac3.chr19 C 0 I 782 s macFas5.chr19 55081875 16 + 59248254 ggaatcgtaagttttt i macFas5.chr19 C 0 I 23 s papAnu2.chr19 47184063 16 + 51301725 GGAATTGTAAGTTTTT i papAnu2.chr19 C 0 I 21 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e panTro4.chr19 59121794 0 + 63644993 C a score=3305.000000 s hg38.chr19_GL949748v2_alt 189267 13 + 1064304 ttttttttttttt s macFas5.chr19 55081914 13 + 59248254 ttttttttttttt i macFas5.chr19 I 23 C 0 s papAnu2.chr19 47184100 13 + 51301725 tttcttttttttt i papAnu2.chr19 I 21 I 304 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=250.000000 s hg38.chr19_GL949748v2_alt 189280 5 + 1064304 attga s macFas5.chr19 55081927 5 + 59248254 tttga i macFas5.chr19 C 0 I 289 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 189285 654 + 1064304 tcattcttgggtgtttctcgcagagggggatttggcagggtcataggacaacggtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcagccttccgcagtgtttgtgtcactgggtacttgagattagggagtggtgatgactcttaacgagcatgctgccttcaagcatctgttcaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaaatgaaaagtctcccatgtctacctctttctacacagacaccgcaaccatccgatttctcaatcttttccccacctttccccgctttctattccacaaaaccgccattgtcatcatggcccgttctcaatgagctgttgggtacacctcccagacggggtggcggccgggcagaggggctcctcacttcccagtaggggcggccgggcagaggcgcccctcacctcccggatggggcggctggcctggcggggggctgacccccccacctccctcccggacggggcggctggccgggcgagggg e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e macFas5.chr19 55081932 289 + 59248254 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=17980.000000 s hg38.chr19_GL949748v2_alt 189939 24 + 1064304 GGAATCATAAGTTTTTAACAAATC s panTro4.chr19 59121794 24 + 63644993 ggaatcataagttttTgacaaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000163 24 + 60714840 ggaatcgtaagtttttaaCAAATC i ponAbe2.chr19 I 1191 C 0 s nomLeu3.chr10 102768410 24 - 106955855 ggaatcataagtttttaaCAAATC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45470540 22 + 49145316 GGAATCAT--GTTTTTAACAAAAC i calJac3.chr22 I 1844 I 2 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e macFas5.chr19 55081932 289 + 59248254 I e rheMac3.chr19 60056559 782 + 64156825 I a score=576319.000000 s hg38.chr19_GL949748v2_alt 189963 407 + 1064304 AAAA-------TATTTCTAAAAA-CCTAGAGTAGGCAGGAAAGG---GGAAACAACACACAGCAGAGGAGA----CAAACAAAAAGGCACACCTGAACAcagtcatgcaccgcataacgatgtttcgctccactacacatttcatatgtgatggtatagcctatgtatgtagtaggttataccacgtaggtttg------tgtaagtagact----ctatgatgttcacacgacgg----tgaattttttttt-ttcttttt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccggctaatttttgtatttttagtagagaca s panTro4.chr19 59121818 413 + 63644993 aaaactaaaaatatttctaaaaaacctagaatacgcaggaaagg---ggaaacaacacacagcagaggaga----caaacaaaaaGGCACACCTGAACAcagtcatgcaccgcataacgatgtttcgctccactacacatttcatatgtgatggtatagcctatgtatgcagtaggttataccacgtaggtttg------tgtaagtagact----ctatgatgtttacacgacgg----tgaattttttttt---cttttt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccggctaatttttgtatttttagtagagaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000187 411 + 60714840 AAAA--TAAAATATTTCTAAAAAACCTAGAGTAGGCAGGAAAGG---GGAAACAACACACAACAGAGGAG--------ACAAAAAGGCACACCTGAACAcagtcatgtgccacataatgatgtttcggtacactacacatttcatatgtgatggtatagcctatgtatgtagtaggttataccacgtaggtttg------tgtaagtacact----gtatgatgttcacacaatgg----tgagttgtttttt-ttttttttaatttgagatggag-tctcattc-tgtttcccaggctggagtgaaatggcatgattttggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggactacaggcgcgtgccacgatggccggctaatttttgtatttttactagagaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768434 413 - 106955855 AAAA--CAAAATATTTCTAAAAACCCAAGAGTAGGCAGGAAAGGGGAGGAAACAACACACAACAGAGGAG--------ACAAAAAGGCACGCCTGAACAcagtcacgtaccgcataacggtgtttcggtccactacacactgcatatgtgatggtatagcctgtgcatgtagtaggttatagcacgtaggtttg------tgtaaatacact----ctgtgatgttcacacaatgg----tgaattttttttttttcttctt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacaattttggctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccagctaatttttgtatttttagtagagaca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55082221 405 + 59248254 -------aaaatatttctaaaaaaccaagagtaggcagcaaagg---ggaaacaacaaaaaacagaggaga----cagacaaaaaGGCAAGCCTGAGCACAATCAGGTGCTGCAGAACGATGTTTCGATCCGCTACACATTGCGTATGTGATGGtacagcctatgtatgtagtaggttataccacgtaagtttgtgtaattgtaagtacact----ctatgatgttcacacaatag----tgaattttttttt-tttttttt--tttgagatggag-tctcactc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccagg---------ttctcctgcctcagcttcccaagtagctgggattacaggtgcgcaccacgatgcctggctaatttttgtatttttagtagagaca i macFas5.chr19 I 289 C 0 s papAnu2.chr19 47184417 403 + 51301725 -------aaaatatttctaaaaaaccaacagtaggcagcaaagg---ggaaacaacaaaaaacagaggaga----caaacaaaaaggcaaGCCTGAGCACAGTCAGGTGCTGCAGAACGATGTTTCGATCCGCTACACATTGCGTATGTGATGGTACAGCCTATGTATGTAGTAGGTTATACCAcataggtttgtgtaagtgtaagtacact----ctatgatgttcacacaatag----tgaa--ttttttt-tttttttt--tttgagatggag-tctcactc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccagg---------ttctcctgcctcagcttcccaagtagctgggattacaggtgcgcaccacgatgcctggctaatttttgtatttttagtagagaca i papAnu2.chr19 I 304 C 0 s calJac3.chr22 45470564 406 + 49145316 -------AAAACATTTCTAAAAAACTAAGAGTAAGCAGGAAGTG---GGAATCAGCAAACAACAGAGGAGAGAGGCAAACAAAAAGGCAAGCCTGA-TGCAGTCACGTGCTGCGTAACGGCCTTGCAGTCCGCTACACGTCGCG--TGTGATGACGTAG-CGATGCGCGGACtaggttatatcctgtaggttt-------tgcaagtacgctcgcactatgaggttcgcacagtggtttttgtttttgttttt-gtttttgt--tttgagacagagttttcgctcttgttgcctagac----atgcaatggcatgatctcggctcaatacaacctctacctcccgggttcaa-------tcctgcctccgcttcctgagtagttgggattacaggcatgtgccatgatgcccagctaatttttgtatttttaataaagaca i calJac3.chr22 I 2 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056559 782 + 64156825 I a score=139685.000000 s hg38.chr19_GL949748v2_alt 190370 58 + 1064304 gggtttcaccatgttgagcaggctggtctcgaattcccgacctctggtgatccaccca s panTro4.chr19 59122231 58 + 63644993 gggtttcaccatgttgagcaggctggtctcgaattcccgacctctggtgatccaccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000598 58 + 60714840 gggtttcaccatgttgagcaggctggtatcgaattcccgacctctggtgatccaccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768847 58 - 106955855 gggtttcaccatgttgagcaggctggtctcgaattcccaacctctggtgatccaccca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55082626 58 + 59248254 gggtttcaccatgttgagcaggctggtctcgacctcctgacctctggtgatccaccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184820 58 + 51301725 gggtttcaccatgttgagcaggctggtctcgaactcctgacctctggtgatccaccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887029 58 + 50890351 gggtttcaccatgttgaacaggctggtctcgaactcctgacctctggtgatccaccca i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45470970 58 + 49145316 gggtttcaccatgttggccaggctggtcctgaactcctgacctctggtgatttgcccg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60056559 782 + 64156825 I a score=447156.000000 s hg38.chr19_GL949748v2_alt 190428 173 + 1064304 tcttggcctcccaaagttctgggattacaggcatgagccaccacgcct------ggccaaaattttttaatgatggctttctcagaacatatccctgtcattaagtgacatacggttgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAAtt s panTro4.chr19 59122289 173 + 63644993 tcttggcctcctaaagttctgggattacaggcgtgagccaccacgcct------ggccgaaattttttaatgatggttttctcagaacatatccctgtcattaagtgacatacgattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAAtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000656 168 + 60714840 tcttggcctcccaaagttctggg-----aggcatgagccaccacgccc------ggccaaaattttttaatgatggatttctcagaacatatccctgtcattaagtgacatacaattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768905 173 - 106955855 tcttggcctcccaaagttctgggattacaggcatgagccaccacgccc------ggccaaaattttttaatgatggatttctcagaatatatccctgttattaagtgacatacaattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057341 169 + 64156825 Tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGATCTAAAAGAGATTACAAGATTGGA--- i rheMac3.chr19 I 782 C 0 s macFas5.chr19 55082684 169 + 59248254 tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGATCTAAAAGAGATTACAAGATTGGA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184878 169 + 51301725 tcttggcctcccaaagttctggaattacaggagtgagccatcataccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattCAGTGACACACAATTGTAATGCCATCAgtgattacattaaatataagtgATCTAAAAGAGATTACaagattgga--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887087 169 + 50890351 tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGACCTAAAAGAGATTACAAGATTGGA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471028 163 + 49145316 tctccgcctctcaaagtgctgggattaccggcgtgagccaccgcgcccggccatggccaacactttttaaagatggatttctcagaacatatgcccgtcattaagtgacatgaa----------cgtaagtgat----ctaaatac-agcaat-tgaaagagattacaagattggattt i calJac3.chr22 C 0 I 142 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=76016.000000 s hg38.chr19_GL949748v2_alt 190601 38 + 1064304 tttttttttt---gagacagagtcttgctc-tgttgcccagg s panTro4.chr19 59122462 40 + 63644993 tttttttttt-ttgagacagagtcttgctc-tgttgcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000824 41 + 60714840 tttttttttttttgagacagagtcttgctc-tgttacccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769078 40 - 106955855 tttttttttt-ttgagacagagtcttgctc-tgttgcccaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057510 39 + 64156825 --TTTTTTTT-TTGAGATGGAGTTTCGCTCTTGTTGCCCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55082853 39 + 59248254 --tttttttt-ttgagatggagtttcgctcttgttgcccagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185047 39 + 51301725 --tttttttt-ttgagatggagttttgctcttgttgcccagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887256 38 + 50890351 ---ttttttt-ttgagatggagttttgctcttgttgcccagg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45471191 142 + 49145316 I a score=31453.000000 s hg38.chr19_GL949748v2_alt 190639 11 + 1064304 ctgtagtgcag s panTro4.chr19 59122502 11 + 63644993 ctgtagtgtag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000865 11 + 60714840 ctgtagtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769118 11 - 106955855 ctggagtgcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057549 11 + 64156825 CTGGAGTGCAG i rheMac3.chr19 C 0 I 2778 s macFas5.chr19 55082892 11 + 59248254 ctggagtgcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185086 11 + 51301725 ctggagtgcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887294 11 + 50890351 ctggagtgcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471333 11 + 49145316 ctgcagtgcag i calJac3.chr22 I 142 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=222255.000000 s hg38.chr19_GL949748v2_alt 190650 104 + 1064304 tggtgtgatctcggttcactgcaaccactgcctcctgggttcaagcagttctctgcctcagcctccctagtagctgggattacaggtgcctgccaccacacctg s panTro4.chr19 59122513 104 + 63644993 tggtgtgatctcggttcactgcaacctctgcctcctgggttcaagcagttctctgcctcagcctccctagtagctgggattacaggtgcctgccaccacacctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000876 104 + 60714840 tggtgtgatcttggttcactgcaacccctgcctcccaggttcaagcaattctctgcctcagcctcccaagtagccgggattacaggcgcctgccaccacgccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769129 104 - 106955855 tggtgtgatctcggctcactgcaacctctgcctcccgggttcaagcagttctctgcgtcagcctccctagtagctgggattacaggcgtctgccaccaggcctg i nomLeu3.chr10 C 0 I 1977 s macFas5.chr19 55082903 104 + 59248254 tggtgtgatcttggctcactacagcctctgcctcccgggttcaagcaattctctgcctcagcatcctgagtagctgggattacaggtgccggccaccacacccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185097 104 + 51301725 tggtatgatcttggctcactacaacctctgcctcccgggttcaagcaattgtctgcctcagcatcccgagtagctgggattacaggcgcctgccaccacaccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887305 104 + 50890351 tggtatgatcttggctcactacaacctctgcctcctgggttcaagcaattgtctgcctcagcatcccgagtagctgggattacaggcgcctgccaccacaccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471344 101 + 49145316 tggcgccatctcggctcaccgcaacctctgtctcc-ggggtcaagcaattctctgcctc--cctccccagtagctgggattatagacatctgccaccacacctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60057560 2778 + 64156825 I a score=171433.000000 s hg38.chr19_GL949748v2_alt 190754 73 + 1064304 gccagtttttgtatttttagtagagatggggtttcaccatcttggccaggctagtcttgaactcctgaccttg s panTro4.chr19 59122617 73 + 63644993 gccaatttttgtatttttagtagagacggggtttcaccatcttggccaggctagtcttgaactcctgaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000980 73 + 60714840 gccaatttttgtatttttagtagagatggggtttcaccatcttggccaggctagtcttgaactcctgaccttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771210 73 - 106955855 gccaatttttgtatttttagtagagacggggtttcagcattttggccaggctagtcttgaactccttgacttg i nomLeu3.chr10 I 1977 C 0 s macFas5.chr19 55083007 73 + 59248254 gctaatttttgtatttttagtagggacggggtttcaccatcttggccagactagtcttgaactcctgaccttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185201 73 + 51301725 gctaatttttgtatttttagtagagacggggtttcaccatcctggccagactagtcttgaactcctgaccttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887409 73 + 50890351 gctaatttttgtatttttagtagagacggggtttcaccatcttggccagactagtcctgaactcctgaccttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471445 73 + 49145316 gctaatttctgtatttttagtagagacagggtttcaccatcttgggcaggctggtcttgcactcctgacctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60057560 2778 + 64156825 I a score=847624.000000 s hg38.chr19_GL949748v2_alt 190827 292 + 1064304 tgatccacccgccttggcctcccaaagtgctgggattacaggcatgaacccccgcgcctggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------tttttttgagacagggtctc------gtccaggctgaagtgctgtggtgcgatctcggctcattgcagcctcgacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg s panTro4.chr19 59122690 292 + 63644993 tgatccacccgccttggcctcccaaagtgctgggattacaggcatgagcccccgcgcctggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------ttgttttgagacagggtctc------atccaggctgaagtgctgtggtgcgatctcggctcattgcagcctcgacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg i panTro4.chr19 C 0 I 10 s ponAbe2.chr19 56001053 298 + 60714840 tgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagtccccgtgcctggccTGTTGTTTATATTTTATCACATTAAAAAACCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------tttttttgagacagggtctcactgttgtccaggctgaagtgctgtggtgcggtcttggctcactgcagcctcgacctcctgtaccca-agtgatcctcccatctcagcctctc-aagta-gctgtgactacaggtgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771283 298 - 106955855 tgatctacccgcctcagcctaccaaagtgctgggattacaggcatgagcccctgcgcctggccTGTTGTTTATATTTTATAACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGTCTTGTTAGttgttttg------tttttttgagacagtgtctcactgttgtccaggctgaagtgctgtggtgtgatcttggctcaccgcagcctcaacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060338 305 + 64156825 tgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgaggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i rheMac3.chr19 I 2778 C 0 s macFas5.chr19 55083080 305 + 59248254 tgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgaggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185274 305 + 51301725 tgatccaccctcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcctgttgtttatattttatcacattaAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCTTTTaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgtggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887482 305 + 50890351 tgatccaccctcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgtggtaccatcttggctcactgcagccttgacctcctgtgcccacagtgattctcccgcctcagcctctc-aagta-gctgggactacaggcgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471518 297 + 49145316 tgatccgcctgccttggcctcccaaagtgctgggattgcaggtgtg-gccaccacccctggcattttatttata-tTTATCACATTAAAAAAACCGAAGGTTGAAAAATGTATTATGCAAACACGAATCAACAGATAATTTCACTGGAtttttagtt-ttctg------atttttttagacagggtctcactgttgcccaggctggagagctgtggtgtgatcttggctcactgcagcctcgacctcctgtgccca-agtgatcctcccacctcagcctccctaagtgcgctggggctacaggtgtg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=49923.000000 s hg38.chr19_GL949748v2_alt 191119 22 + 1064304 tgccaccacgccggactggttt s ponAbe2.chr19 56001351 22 + 60714840 tgccaccgtgccagactggttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771581 22 - 106955855 tgccaccacgccggactggttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060643 22 + 64156825 tgccgccatgccggactagttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083385 22 + 59248254 tgccgccatgccggactagttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185579 22 + 51301725 tgccgccatgccggactagttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887787 22 + 50890351 tgccgccatgccggactagttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471815 22 + 49145316 tgccaccatgcctgactagctt i calJac3.chr22 C 0 I 39969 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e panTro4.chr19 59122982 10 + 63644993 I a score=125832.000000 s hg38.chr19_GL949748v2_alt 191141 66 + 1064304 tattttttgtagagatggggcctcacaatgctgatctgactga-ctcgaactcctgagctcaagcta s ponAbe2.chr19 56001373 66 + 60714840 tattttttgtagagatggggtctcactattctgctccgactga-cttgaactcctgagctcaagcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771603 66 - 106955855 tattttttgtagagatggggtctcactatgctgctccgactga-ctcgaactcctgagctcaagcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060665 66 + 64156825 tattttttgtagagatggggtctcactatgctgttcagactga-ctcgaactaccgagctcgagcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083407 66 + 59248254 tattttttgtagagatggggtctcactatgctgttcagactga-ctcgaactcccgagctcgagcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185601 65 + 51301725 ta-tttttgtagagatggggtctcactatgctgttcAGACTGA-CTTGAACTGCCGAGCGCGAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887809 66 + 50890351 tattttttgtggagatggggtctcactatgctgttcagactga-ctcgaactcccgagctcgagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45511806 65 + 49145316 tatttttagtagagacagggtttcaccatcttgggcaggctggtcttgcactcctgacctcatga-- i calJac3.chr22 I 39969 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e panTro4.chr19 59122982 10 + 63644993 I a score=164320.000000 s hg38.chr19_GL949748v2_alt 191207 59 + 1064304 tcctccccacttgccctcccaaagtattgggattacaggtgtgagccactgcacctggT s panTro4.chr19 59122992 59 + 63644993 tcctccccacttgccctcccaaagtattgggattacaggtgtgagccactgcacctggT i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56001439 59 + 60714840 tcctccccacttgccctcccaaagtattgggattacaggcatgagccactgcacctggT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771669 59 - 106955855 tcctccccacttgccctcccaaagtactgggattacaggcgtgagccactgtacctggT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060731 59 + 64156825 tcctccccgcttgccctcccaaagtattgggattacagatgtgagccactgcacctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083473 59 + 59248254 tcctccccacttaccctcccaaagtactgggattacagacgtgagccactgcacctggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185666 59 + 51301725 CCCTCCCCACTGaccctcccaaagtattgggattacagacgtgagccactgcacctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887875 59 + 50890351 ccctccccacttaccctcccaaagtattgggattacagacgtgagccactgcacctggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45511871 57 + 49145316 tccgcctgccttggcctcccaaagtgctgggattgcaggtgtg-gccaccacccctgg- i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=7890.000000 s hg38.chr19_GL949748v2_alt 191266 9 + 1064304 TATGCTTCT s panTro4.chr19 59123051 9 + 63644993 TATGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001498 9 + 60714840 TATGCttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771728 9 - 106955855 TATGCTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060790 9 + 64156825 TATGCTTCT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45511928 5 + 49145316 ----cattt i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C a score=61277.000000 s hg38.chr19_GL949748v2_alt 191275 121 + 1064304 --TTTTTAtt------------------------------------------------------------ttttttct---ttctttttttttt--tttttcgagacggaatctcactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctctgcctcccgggctcatgcc s panTro4.chr19 59123060 121 + 63644993 --TTTTTAtt------------------------------------------------------------atttttct---ttctttctttttt--ttttccgagacggaatctcactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctctgcctcccgggctcacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001507 112 + 60714840 --tttttatt-------------------------------------------------------------tttttct---ttctttttttt----------gagatggaatctcactctgttgcccaggccggagtccagtggtgcgatcttggctcactgcaagctccgcctcccgggttcacacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771737 128 - 106955855 --TTTTTATTTTTTtc-----------------------------------------------------tttctttct---ttctttttttttt--ttttttgagacagaatcacactctgccacccaggctggagtgcagtggcgtgatctcagctcactgcaagctctgcctcccgggctcacgcc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45511933 186 + 49145316 tatttatatTTATCACATTAAAAAAACCGAAGGTTGAAAAATGTATTATGCAAACACGAATCAACAGATAATTTCACTGGAtttttagttttctgatttttttagacagggtctca--ctgttgcccaggctggagagctgtggtgtgatcttggctcactgcagcctcgacctcctgtgcccaagtg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C e rheMac3.chr19 60060799 0 + 64156825 C a score=150522.000000 s hg38.chr19_GL949748v2_alt 191396 200 + 1064304 attctcctgcctcagcctcctgagtagctgggactataggcactcgccaccacgcccggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcatg--atccgcccgcat---cagcctcccaaagtgctgagattataggcgtgagccaccgcgcccggccTATT s panTro4.chr19 59123181 200 + 63644993 attctcctgcctcaacttcctgagtagctgggactataggcacccgccaccacgcccggctaatttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcgtg--atccgcccgcct---cggcctcccaaagtgctgagattataggcgtgagccaccgcgcccggccTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001619 200 + 60714840 attctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccgcgcctggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtgtcgatctcc-------------------------cgacctcatg--atccgcccacct---cggcctcccaaagtgctgagattacaggcgtgagccaccgcgcccggccTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771865 200 - 106955855 attctcctgcctcagcctcccgagtagctgggactataggtgcccgccaccacgcccagctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcatg--atccgcccgcct---cggcctcccaaagtgctgagattataggcatgagccaccgcgcccggccTATT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45512119 191 + 49145316 atcctcccacctcagcctcccaagtcgctggggctacaggtgtgtgccaccatgcctgactagctt-----tactttctggagaggttgggtctcacgatgctgctcaggctggctgcaa-ctcc-------------------------tgagctcaagccatcctccccact---tgccctcccgaagtgttgggattacaggcgtgagccactgtacctggT----- i calJac3.chr22 C 0 C 0 s mm10.chr7 3712089 210 + 145441459 atttgcctggctctacctccttagtt-ctgagatggaaggcatgcaattccaagcttggcCTATtgatt--catttttagaaagggtctagt------gtgtt--ccaggctggcctcttactcctaggctatgtagctgaaaatgaccttgacctcttg--accctccctcctttccactcctctaaaatgctgggatttcaggtgtgttctac----cCTGGCCT--- i mm10.chr7 T 4822 C 0 e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C e rheMac3.chr19 60060799 0 + 64156825 C a score=21980.000000 s hg38.chr19_GL949748v2_alt 191596 9 + 1064304 TATGCTTCT s panTro4.chr19 59123381 9 + 63644993 TATGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001819 9 + 60714840 TATGCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772065 9 - 106955855 TATGCTTCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55083532 9 + 59248254 TATGCTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185725 9 + 51301725 tatgcTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887934 9 + 50890351 TATGCTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512310 9 + 49145316 TACGCCTCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3712299 0 + 145441459 C e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60060799 0 + 64156825 C a score=566480.000000 s hg38.chr19_GL949748v2_alt 191605 217 + 1064304 TAATTTTCCCATGTCATAAGTTCGATGTATAATATTTACATTATCATTCAGTTTAAAACATTCACT--------------Gttt-ttttttttagagacaaggtctcgctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttgtgttcaaggaatcctccccactcagcctcctgagtaccacacccg-----------------gcctttac s panTro4.chr19 59123390 216 + 63644993 TAATTTTCCCATGTCGTAAGTTCGATGTATAATATTTACATTATCATTCAGTTTAAAACATTCACt---------------ctt-ttttttttagagacaagttctcgctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttatgttcaaggaatcctccccactcagcctcctgagtaCCACACCCG-----------------GCCTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001828 229 + 60714840 TAAGTTTCCcatttcataagtttgatgtgtaatatttacattatcattcaatttaaaacattCACTCACtcttttttttttttt-ttttttttagagacaaggtcttgctctgtcacacaggctggagtgcagtggcacagtc--agctcactgcagcctcagcagccttaacttcttgtgttcaaggaatcctccccactcagcctcccgagtaCCACACCCG-----------------GCCTTTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772074 218 - 106955855 TAATTTTCCcatttcgtaagtttgatgtgtaatatttacattatcattcagtttaaaacattCACT-------------CAtct-ttttttttagagacaaggtctcgctctgtcccataggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttgtgctcaaggaatcctccctactcagcctcctgagtaCCACACCCG-----------------GCCTTTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060799 210 + 64156825 TAATTTTCCCATTTCGTAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAACATTCACT-------------CACtc-tttttttt--------ggtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaaacctcccgactcggcctcccgagtaCCACACCTG-----------------GCCTTTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083541 210 + 59248254 TAATTTTCCCATTTCGTAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAACATTCACT-------------CACtc-tttttttt--------ggtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaatcctcccgactcagcttcccgagtaCCACACCTG-----------------GCCTTTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185734 211 + 51301725 TAATTTTCCCATTTCATAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAACATtcact-------------cactcttttttttt--------tgtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagCCTGAACCTCTTgtgttcaaggaatcctcccgactcagcctcccgagtgccacacctg-----------------gcctttac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887943 211 + 50890351 TAATTTTCCCATTTCATAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAACATTCACT-------------CACtcttttttttt--------tgtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaatcctcccgactcagcctcccgagtGCCACACCTG-----------------GCCTTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512319 215 + 49145316 TAATTTTCCCATTTTGTAAGTTGGATGTGGAATATTGACATTATCATTCAATTAAAAACATTCACt----------------ct-tttttttaagagacaaggtctcgatctatcacacaggctggagtgcagcggcagagtcatggctcactgcagcctcagcatccttaacctcttgggttcaaggcattctcccgactcagcctcccaagtGCCACAACTG-----------------GCCTTTAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3712299 139 + 145441459 ---------------------TTGGTGGCTAAT-----------------GTTTAAAAca------------------------------------------------ctctgtagcccaggttggcatgaaattcactag--atgactcaccatggccaca----------------------aaacaaattcccctcgtcagcctcctgtgggttggaattgtggggctgtgcaacagtgcctgTAA i mm10.chr7 C 0 C 0 e canFam3.chr1 103003719 5795 + 122678785 T a score=220687.000000 s hg38.chr19_GL949748v2_alt 191822 80 + 1064304 gtctgtttttgtttt--------------------------------------------------------ttgtTTTTTTGTTATT-AACTCA-TTGATTGTTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGGGACG s panTro4.chr19 59123606 77 + 63644993 GTCTGTTTTTTTTTT--------------------------------------------------------TT---TTTTTGTTATT-AACTCA-TTGATTGTTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGGGACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002057 78 + 60714840 GTCTGTGTTTTTTTT--------------------------------------------------------TT--ttttttcttatt-aactca-ttgattattgagaagtctgttgcttt-atttccaaaatgcgacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772292 78 - 106955855 GTCTGTGTGTTTTTT--------------------------------------------------------TT--TTTTTTCTTATT-AACTCA-GTGATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061009 73 + 64156825 GTCGG-----TTTTT--------------------------------------------------------TT--ttttttcttatt-aactca-ttaattattgagaagtctgttgcttt-atttccaaaatgcgacg i rheMac3.chr19 C 0 I 308 s macFas5.chr19 55083751 74 + 59248254 GTCGG----TTTTTT--------------------------------------------------------TT--TTTTTTCTTATT-AACTCA-TTAATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47185945 78 + 51301725 gtctgtttttttttt--------------------------------------------------------tt--ttttttcttatt-aactcA-TTGATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i papAnu2.chr19 C 0 I 315 s chlSab2.chr6 46888154 73 + 50890351 GTCTG-----TTTTT--------------------------------------------------------TT--ttttttcttatt-aactca-ttgattattgagaagtctgttgcttt-atttccaaaatgcgatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512534 71 + 49145316 GTCTG-------TTT--------------------------------------------------------TT--ttttttcttatt-gactca-ctgattattgagaggtctgctgcttt-atttccaaaatgcgagg i calJac3.chr22 C 0 C 0 s mm10.chr7 3712438 129 + 145441459 ATTTTCTCATTTCCTAGCTTTGTTGAGAAATATCATTAAAGTTAGCACTCAATGTAAAACCTTCCCTTCCATT--TCATTTCTCATT----TCACTTGATTATTGAGAAATCTCTAGCTTT-ATTTCCAAACTCTG--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19700859 79 - 122678785 gtctc-atttccatt--------------------------------------------------------tt--ggttttctcattaaattcc-tggattattgagaagtccactgctttaatttccatagtgtaggg i canFam3.chr1 T 23254 C 0 a score=533092.000000 s hg38.chr19_GL949748v2_alt 191902 156 + 1064304 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCATGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAGTGTGGGG s panTro4.chr19 59123683 156 + 63644993 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCATGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCACTG----GTGTCCACTGTGGGCAGCTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAGTGTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002135 156 + 60714840 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCATCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCATTG----GTGTCCACTGGGGGCAGCTCCTGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAATGTAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772370 154 - 106955855 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTATCCTCGTGGTC--TGTTAGGGGTCCAGGCTGACTGGGGTTCATTG----GTGTCCACTGGGGGCAGTTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTCCTGAGTGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061390 153 + 64156825 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCTCGTGCCTTCAGCAGTCCCGAGTCTC---CTGCTGAGTGTGGGG i rheMac3.chr19 I 308 C 0 s macFas5.chr19 55084139 153 + 59248254 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCCGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCCGAGTCTC---CTGCTGAGTGTGGGG i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47186338 156 + 51301725 atattaGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCCGAGTCTCCTTCTGCTGAGTGTGGGG i papAnu2.chr19 I 315 I 31878 s chlSab2.chr6 46888227 156 + 50890351 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGTGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGTCTGAGGTTCATTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAGTGTGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512605 148 + 49145316 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGTGCCTCCTGGTGGTCTGTGTTAAGGGTCCAGGCTGGCTGGGGTCTATTG----GTGTCCACTGGGGGCAGCTCCCATGTCTT--------CTGAGTGTCCTTCTGTTGAGTGTGGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3712567 126 + 145441459 ATGTTACTTAAAGTGCAG-------TCACGT---TTCCAAAAGTTCCCAGAGTCCCTTGGAGGTCTCTGCTAGGCATCCTGGCAGGCAGGGGGTCATTGCTCCATGTCC-TTGGGAACAGCCTCTGGAC---GAGCAGCC--------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19700938 137 - 122678785 atattagctatctttGAGGGCAGAATTGGGTGACTTGCAAAGGGTCCCAGGAGTTACTAGTGGTCTGTGTGAGGAGTCCAGGCTGGCTGG-------TA----GCACCCACTATGGGCAGGTCCTGTGCCTTC------CTTGGGTC-------------CGTGGGG i canFam3.chr1 C 0 C 0 a score=797111.000000 s hg38.chr19_GL949748v2_alt 192058 203 + 1064304 TCTGCGTACCCCCC-GGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCCGTCTAAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGAGGCTTCAGATGCAGCAGCCTGCAGCGGGGGAGAGTGAGAGGTAAGGAACGTGGTGGG s panTro4.chr19 59123839 203 + 63644993 TCTGCGTGCCCCCC-GGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCTGTCTAAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGCGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002291 204 + 60714840 TCTGTGTCCCCCCCTGGGCTAGTGGATGGCCAGGGTGGCGTAGACGCTGGCCTCAGCTGGAGGTTCCCGTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772524 203 - 106955855 TCTGGGTCCCCTCT-GGGCTAATGGATGGCCAGTGTGGCATAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCGTCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061543 203 + 64156825 TCTGGGTCCCCACC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCATAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084292 203 + 59248254 TCTGGGTCCCCACC-GGGCTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGGTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACATGGTGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47218372 202 + 51301725 TCTGGGTCCCCCAT-GGGCTAGTGGATGGCCAGAGTCTCAAAGACTCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAgtgggggagagtgagagggaaggagcgtggt-gg i papAnu2.chr19 I 31878 C 0 s chlSab2.chr6 46888383 202 + 50890351 TCTGGGTCCCCTCC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCGGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTAGGGGAGAGTGAGAGGGAAGGAACGTGCT-GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512753 202 + 49145316 TCTGGGTCCCC-CT-GGACTAGTGGATGGCCACAGTGGCGTAGATGCTGGGCTCAGCTGGAGGGGCCCCTTCCTGAGAGGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAAGTCACATCCTGGGGGCCTTCAGAGGCAGCAGCCTGCAGTGTGGGAGAGTGAGAGGTAGGGAACGTGGTGGG i calJac3.chr22 C 0 I 27011 s mm10.chr7 3712693 174 + 145441459 ----------------------------GCCAGAGTAGCATATACACTGGGCTCCTCTGGGGCTTCCCCTGCCTGGGAGAGAGGAGATGCAGCTGCCCCCTGTCTGAGTGTCCTGCTGCACAGCTGGGCATAGGTCACATCCTGGGACTCCCCAGATTCGGCAGCCTGGAGTGGGAGAGGGTGAGAGA-AAGGTATGTGATTT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701075 203 - 122678785 TCTGGGTCCTTCCT-GGGCTAGTGAATGGCCAGAGCAGCATACACGCTGGGCTCTGCTGGGGGCTCCCCTGACTGGGAGGGAGAGGATGCACTTGTCTTCTGTCTGAGGGTCAAGTGGTTCAGCTGAGCGTAGGTCACATCTGGGGGGGCGTCAGATGCAGCAGCCTGCAGCAGGGGAGAGTGAGAGGGGAGGTTGGTGTTGGG i canFam3.chr1 C 0 C 0 a score=273099.000000 s hg38.chr19_GL949748v2_alt 192261 73 + 1064304 GGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCCACCTG s panTro4.chr19 59124042 73 + 63644993 GGTCGGGGAGGCCTGGGGGTCTGGAGAGGAAAGGACTCACCTGAGTGTCCATCTGCCTGTCCTCTTCCGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002495 73 + 60714840 AGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTAAGTGCCCATCTGCCTGTCCTCTTCTGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772727 73 - 106955855 GGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCTGCCTG i nomLeu3.chr10 C 0 M 1242 s rheMac3.chr19 60061746 73 + 64156825 GGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCGGCCTGTCCTCTTCCGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084495 73 + 59248254 GGTGGGGGAGGGTTGGGGGCCTGGAGAGGAAAGGACCAGCCTCAGTGTCCCTCTGCCTGTCCTCTTCCGCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47218574 73 + 51301725 ggtgggggaggcctgggggcctggagaggaaaggaCCAGCCTGAGTGTCCATCTGCCTGTCCTCTTCCACCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888585 73 + 50890351 GGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTGAGTGTGCATCTGCCTGTCCTCTTCCGCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539966 73 + 49145316 GGTGGGTGAGGCCTGGGGGCCTGGAGAGGAAAGTATCTACCTGACTGTCCATCTGCCTGTCCTCTTCTGCCTG i calJac3.chr22 I 27011 C 0 s mm10.chr7 3712867 73 + 145441459 GCTTGGGGAAACCTGCAGGTCTGTGGAGGACAGGACCCACCTGATTGTTTGCTCCTTGGCCCTCTTCTGCTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19701278 73 - 122678785 GTGGGGGGAAGCCAGGGTGATCAGAGAAGACAGGGCCCACCTGACTGTCCATCCACCTATCTTCCTCTGCTTG i canFam3.chr1 C 0 C 0 a score=715824.000000 s hg38.chr19_GL949748v2_alt 192334 266 + 1064304 TCTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGAGGAGGGAGGAGAGGCCATTTCTCTCCTAGGACTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCTCCTGGAGTCAATTTTCCTCACTGTTCCCGGGGTGAT-----------------CCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct s panTro4.chr19 59124115 266 + 63644993 TGTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGGGGAGGGAGGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATTGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAATCCCCCT---GACCTCCTGGAGTCAATTTTCCCCACTGTTCCCCGGGTGAT-----------------CCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002568 266 + 60714840 TGTGTCCTTTGTGTCCAGGAATTCCTCAGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACTGGGGCATATGTCATTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAATCCCCCT---GACCTCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CTGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60061819 266 + 64156825 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGTCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CTGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGGGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084568 266 + 59248254 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCGTATGTCACTGCCTGGGGGTCTTCATCGTGTGGCCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCTTCACTGTTCCCAGGATGAT-----------------TCGACTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCGAAGGCCGTGGAGggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47218647 266 + 51301725 TGTGTCCTTTGTGTCCAGGAATTCCTCggacagtggggagggaggggaggccaTTTCTCTCCTAGGTCTGGAGTGTT------TCACCCGGGCATATGTCACTGCCTGGGGGTCTTCATCGTGTGGTCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCCCCACTGTTCCCAGGGTGAT-----------------CCGATTACACCCCT---TTCCTGATGGAATCT-CAGGGATGCCCTAAGGCCGTGGAGGGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888658 266 + 50890351 TGCGTCCTTTGTGTCCAGAAATTCCTCGGACAGTGGGGAGGGAGGAGAGGCCACTCCCCGCCTGAGTCTGGAGTGTT------TCACCTGGGCATGTGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACACTGGTGGGG-------g-----gtgtccttgaatccccct---gaccccctggagtcaattttcttcactgttcccagggtgat-----------------ccgattaTATCTCT---TTCCTGATAGAATCT-CAGGGATGCCCTAAGGGCGTGGAGggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540039 264 + 49145316 TTTGTGCTATGTGTCCAGGAATTTCCTGGACAGGGGGGAAGCAGGGGAGGCCATTTCTCTCTTAGGTCTGGAATGTT------TCACCTCAGCATAGGTCTTCGCCTGGGGGTCTTCATCATATGGGCTCTGCTCGAGACAGACAGTGGTGGGA-------G-----GTGTCCTTGAGTCCCCCT---GACCTCCTCGAGTCAGTTTTCC-CACTGTTCCCTGAGTGAT-----------------CCCATTACATCCCT---TTCCTGATGGAATCT-CAGGG-CGCCCTAAGGCTGTGGAGggtct i calJac3.chr22 C 0 C 0 s mm10.chr7 3712940 250 + 145441459 TTCATATTCTGTGTTCAGTTGTTCCCTTGACATGACAGAAGGTGAGACATGTCCTGCCTTCCTGAGCCTGGAGGGTT------TCACCTGGGCATAAGTCTCTCCCTGGGGATCTTCCTCAGGTGGTGTCTGT---AGCAAGGAAGTAGTGAGGTACAGACA-----GTGTCTTCCTGTTCCCCTGGGGATCTTCTTTGGCCAG-TTTCCATAGCATGGCTAGAGTGAC-----------------CTGTTTAGATTACTGCCTCTCTGATGGGAACT---------TCCT----------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701351 293 - 122678785 TCTGTCCTCTGAGTCCTGTAATCCTCCTGAAAGGGAGGAAGGAGGAGTGGCCAGGACCTGCCTGGGACTTGATCATTAGTAGCTCACCTGGGCGTACATGTCTCCATGGGGTTCTTCATCCTGTGTGTTCTTCTGCAGACAGACAGTGAGGGGG-------AGGTTTgtctccttgaattcactc---catcacttc-agtcaatttgccacactgtggccagagtgatgctttcaaactttcaggcagattaggtcact---ttcctgctggactctgcagggacttcctga-gccttgaagcatgt i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102772800 1242 - 106955855 M a score=88021.000000 s hg38.chr19_GL949748v2_alt 192600 23 + 1064304 ggccgctccctccctgtggttct s panTro4.chr19 59124381 23 + 63644993 ggccgctccctccctgtggttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002834 23 + 60714840 ggccgctccctccctgtggttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774042 23 - 106955855 GGCCGCTCCCTCCCTGTGGTtct i nomLeu3.chr10 M 1242 C 0 s rheMac3.chr19 60062085 23 + 64156825 GGCCGCTCCCTCCCTGTGGTTCT i rheMac3.chr19 C 0 I 43517 s macFas5.chr19 55084834 23 + 59248254 ggccgctccctccctgtggttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47218913 23 + 51301725 GGCCGCTCCCTCCCTGTGGTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888924 23 + 50890351 ggccgctccctccctgcggttct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540303 23 + 49145316 ggctactcccttcctgcggttct i calJac3.chr22 C 0 C 0 s mm10.chr7 3713190 21 + 145441459 GG--GTTTCCTTCTTACAGTTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19701644 22 - 122678785 -gatgttttctttctatggctct i canFam3.chr1 C 0 C 0 a score=151449.000000 s hg38.chr19_GL949748v2_alt 192623 50 + 1064304 ggcctctgctcctcactctga-ccttgcccatttggctgcagcctcaca-gg s panTro4.chr19 59124404 50 + 63644993 ggcctctgctcctcactctga-ccttgcccatttggctgcagcctcacg-gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002857 51 + 60714840 ggcccctcctcctcactctga-ccttgcccatttggctgcagcctcacgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774065 51 - 106955855 ggcctctcctcctcattctga-ccttgcccatttggctgcagcctcacgcgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60105625 50 + 64156825 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctaatgcc- i rheMac3.chr19 I 43517 T 43560 s macFas5.chr19 55084857 50 + 59248254 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctcacacg- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47218936 50 + 51301725 GGCCTCTCCTCCTCACTCTGA-CCTTGCCCATTTGGCTGAAGCCTCACGCC- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46888947 50 + 50890351 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctaatgcc- i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45540326 50 + 49145316 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctcacgcc- i calJac3.chr22 C 0 I 2 s mm10.chr7 3713211 50 + 145441459 AGCTTAACCTGA-CATTCAGACCCTTGCTGTCTTGGCTCTAGCCACACAGT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701666 50 - 122678785 -ggttctattcctgacactgtttcttgcccatttgccaccagccatatgac- i canFam3.chr1 C 0 C 0 a score=13929.000000 s hg38.chr19_GL949748v2_alt 192673 5 + 1064304 ---ccttc s panTro4.chr19 59124454 5 + 63644993 ---ccttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002908 5 + 60714840 ---ccttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774116 5 - 106955855 ---ctttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084908 5 + 59248254 ---ccttc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47218988 5 + 51301725 ---CCTTC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46888999 5 + 50890351 ---ctttc i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45540378 5 + 49145316 ---ccttc i calJac3.chr22 I 2 C 0 s mm10.chr7 3713261 5 + 145441459 ---CCATC i mm10.chr7 C 0 I 326 s canFam3.chr1 19701716 8 - 122678785 ccatgttc i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60105675 43560 + 64156825 T a score=115860.000000 s hg38.chr19_GL949748v2_alt 192678 49 + 1064304 ctgcaagagctcgctgctgcctgggggcctttgcacggctgtttcctct s panTro4.chr19 59124459 49 + 63644993 ctacaagagctcgctgctgcctcggggcctttgcacggctgtttcctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002913 49 + 60714840 ctgcaagagcttgctgctgcctcggggcctttgcacggctgtttcctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774121 36 - 106955855 -------------ctgctgcctcggggcctttgcacggctgtttcctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084913 49 + 59248254 ctgcaagagctcgctgctgcctcggggcctttgcacggctgtttcttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47218993 49 + 51301725 CTGCAAGAGCTTGCtgctgcctcaggacctttgcacggctgtttcctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889004 49 + 50890351 ctgcaagagctcgctgctgcctcaggacctttgcacggctgttgcctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540383 48 + 49145316 ccacaagagctcactgcggcctcggggcc-ttgcactgctgtttcctct i calJac3.chr22 C 0 C 0 s canFam3.chr1 19701724 44 - 122678785 ctgaaaaaccatgttgttgcctcaggacctttgcac-----ttgctact i canFam3.chr1 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e rheMac3.chr19 60105675 43560 + 64156825 T a score=282852.000000 s hg38.chr19_GL949748v2_alt 192727 122 + 1064304 gcctgcaggggctcgtctatcagaggatcatgtgccccactctgtccaggcttctcagatgacagctgagcagacagccctcccctt-ccattcagactggccccactgccccacactctctg s panTro4.chr19 59124508 122 + 63644993 gcctgcaggggctcgtccattagaggatggtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctt-ccattcagactggccccactgccccacactctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002962 122 + 60714840 gcctgtagggtctcgtccattagaggatcgtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctt-ccattcagactggccccactgccccacactctctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774157 122 - 106955855 gcctacaggggctcgtctattagaggatcgtgtgctcccctccgtccaggcttctcagatgacagctgagcacacagccctcccctt-ccattcagactggccccactgccccacactctctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084962 120 + 59248254 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctt-acattcagactggccccactgccccaca--ctctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47219042 120 + 51301725 gcctgcagGGGCTCGTCCATTAGAGGATCCTGTGGCCCCCTCCGTCCAGGCTTCTCAGATGACAGCTGAGCAGAGAGCCCTCGCCTT-ACATTCAGACTGGCCCCACTGCCCCACA--CTCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889053 120 + 50890351 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaagcttctcagatgacagctgagcagacagccctctcctt-acattcagactggccccactgccccaca--ctctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540431 123 + 49145316 acctgcaggggctcgtccattagaggatggtgtggccctctccgtccaggcttctcagatgacagctgaccagacagccctcgccttaccattcagactggccccactgccctgcactctctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e canFam3.chr1 19701768 0 - 122678785 C e rheMac3.chr19 60105675 43560 + 64156825 T a score=641048.000000 s hg38.chr19_GL949748v2_alt 192849 271 + 1064304 ccctttccctggtgtatgttcctta-cagcacgttgcactcctggacacgatgca-tttatttgcattttgtctccca-ccatgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccatggggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGAGGAGCCCAGGGGACGG-AGGTGGTTCATTTATTCGT-CATCCTCCTGAGGCCTGGGGA-GAGCTCTAACAACCAGACGG s panTro4.chr19 59124630 271 + 63644993 ccctttctctggtttatgttcctta-cagcacgttgcactcctggacatggtgca-tttatttgcattttgtctccca-ccatgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccacagggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGAGGAGCCCAGGAGACGA-AGGTGGTTCATTTATTCCT-CATCCTCCTGATGGCTGGGGA-GCGCTCTAACTACCACATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003084 267 + 60714840 ccctttccctggtttatgttcctta-cagcacgttgcactcctggacacggcgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagttccc-gggaacactcgctggatgaatgaatGAAGGGGAGCCTGGGGGACCA-GGGTGGTTCATTTATTCCT-CA---TCctgaggcctgcgga-gcgctctaacaaccagatga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774279 270 - 106955855 ccctttccctggtttatgttcctta-cagcacgttgcactgctggacacggtgca-tttatttgcattttgtctccca-gcacgaggtgagctca-gga-ggcgggggcggctctgctccctgctgcgtctgcagctcccacggggagcccgatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGGGGAGCCCAGGGGACT--GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagacgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55085082 268 + 59248254 ccctttccctggtttatgtttctta-cagcacgttgcactgctggacac--tgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctctgctccctgctgtgtctgcagctcccacagggagcccgatccacagtgagctcct-gggaacactggctggatgaatgaatgaaGGGGAGCCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagacgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47219162 269 + 51301725 CCCTTTCCCTGGTTTATGTTTCTTA-CAGCACGCTGCACTCCTGCACATGGTGCA-TGTAGTTGCATTTTGTCTCCCA-CCACGAGGTGAGCTCG-GGA-GGCGGGGGTGGCTTTGCTCCCTGCTGTGTCTGCAGCTCCCACAGGGAGCCTGATCCACAGTGAGCTCCT-GGGAACACtcgctggatgaatgaatgaa-gggagcCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGG-GCGCTCTAACCACCAGACCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889173 270 + 50890351 ccctttccctggtttatgtttctta-cagcacgttgcactcctgcacatggtgca-tttatttgcattttgtctccca-ccatgaggtgagctcc-gga-ggcgggggtggctctgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagctcct-gggaacactcgctggatgaatgaatgaaGGGGAGCCCAGGGGAGCA-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaaccaccagacgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540554 265 + 49145316 ccctttccctggttcattttcctta-cagcacgtcgcactcctggacac--tgtg-tttatttgcattttgtctccca-ccacgaggtgagctca-ggagggcaggggcggctttgctccctgctgtgtctgcagctcccacggggagccccatccacagggagctcct-gggaacactcgctgggtgaatgaatGAAGGGAAGCCCAGGGCACCA-GTGTGGTTC----ATTCCT-CATCCTCCTGAGGCCTGGGGA-TCCCTCTAACAACCAGACGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19701768 272 - 122678785 cccATATCTTGTTTTATATTTCTTAGCCTCACTTTGTGCTTGAGGATGC--TGCAGCTTCTTTGCATATTGTCTGACACCCACAAGGAGAGCTCACTGA-GTATGGTTCAGTTTTGCTTACTGTTGAGCTTGCAAC-ACTAGGTGGGGCCTGGT-AATATTAGACTGCTCGTGCTCCTCTGCTGAGTGAATGAATGAA-GGAGGCCTAGAGACTTGTGGGTGATTCACTTCTTCATGCACCCTGTTGAGATCTGGGTATGCATCCCAACAACAAGAAG- i canFam3.chr1 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e rheMac3.chr19 60105675 43560 + 64156825 T a score=540609.000000 s hg38.chr19_GL949748v2_alt 193120 208 + 1064304 CCAAACAGAGGATGAGGAG-CAGGAAGGGGAC-----CCGGGAGGAGGCCCACGAGGTCCCAGGACAG-CAGAAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCATGCTGGACA------AGGAGG--GGTCCAC-CGT-GACGATGCTGAGAGCCGGGGGAAG--GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCTGGGAC s panTro4.chr19 59124901 208 + 63644993 CCAAACAGAGGCTGAGGAG-CAGGAAGGGGAC-----CCGGGAGGAGGCCCACGAGGTCCCAGGACAG-CAGGAGAGAGTGAGGTCGCAGCAGGCGGGAGGCAGCATGCTGGACA------AGGAGG--GGTCCAC-CGT-GACGATGCTGAGAGCCGGGGGAAG--GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCTGGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003351 208 + 60714840 ccaaacagaggatgaggag-caagaaggggac-----ctgggaggaggcccacgaggtcccaggacac-caggagagagtgacgtcacagcaggcgggaggcagcgtgctggaca------aggagg--ggtccac-cat-gacgatgctgagagccaggggagg--gaggacagagaagtcc-ttcaggattagatctgacactgggaggcctttggtgcccgggac i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102774549 208 - 106955855 ccaaacagaggacgaggag-caggaaggggac-----ccgggaggaggcccacgaggttccaggacag-caggagagagtgaggtcgcagcaggcgggaggcagcgtgttggaca------aggagg--ggcccac-cgt-gacgatgctgagagccgggggaag--gaggacagagaagtcc-tgcaggattagatctggcaccaggaggcctttggtgcccgggac i nomLeu3.chr10 C 0 I 1 s macFas5.chr19 55085350 207 + 59248254 ccaaacagaggaggaggag-caggaaggggac-----ccgggaggaggcccgcgaggtcccaggacag-caggagagagtgaggtcacagcaggcgggaggcagcgtgctggaca------aggagg--ggtccac-cgt-gatgatgctgagaaccgggggaa---gaggacagagaagtcc-tgcaggattagatctggcaccaggaggcctttggtgcccgggac i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47219431 207 + 51301725 CCAAACAGAGGAGGAGGAG-CGGGAAGGGGAC-----CCAGGAGGAGGCCCGCGAAGTCCCAGGACAG-CAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACA------AGGAGG--GGTCCAC-TGT-GACGATGCTGAGAACCGAGTGAA---GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGAAC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46889443 207 + 50890351 ccaaacagaggaggaggag-cgggaaggggac-----ccgggaggaggcccgcgaggtcccaggacag-caggagagagtgaggtcacagcaggcaggaggcagcgtgctggaca------aggagg--ggtccac-cgt-gatgatgctgagaaccgggaaag---gaggacagagaagtcc-tgcaggattagatctggcaccaggaggcctttggtgcctgggat i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45540819 207 + 49145316 CCAAACAGAGGACGAGGAG-CAGGAAGGGGAC-----CCAGGAGTAGGCCCACGATGTCCCAGGACAC-CAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACA------TGGAGG--GTCCACC-CTG-GATGGTGCTGAGAGCCAGGGAAG---GAGGACAGAGAAGTCC-TGCTGGATTAGATCCGGCACCAGGAGGCCTTTGGTGCCCAGGAC i calJac3.chr22 C 0 I 1 s mm10.chr7 3713592 210 + 145441459 CCAGACACATGCTAAAGAGCCAGAAAGGGGACAGGAGCTGGAAGAA-----ACATGGTCCCAGGAAAACCAGGAGAGAGTGAGG-CATAGAACCCAGGAGGCAG-GTGCTGGGCATAGGGCGGGAGT--GGTCAGC-TTTGGATATTGCTGAGGGCTGAGGGAGGCAGAAGAAAGAAGAGCCC-TGT---ACTAAGCTTGGCCCTAAGG----TTTAGCACTGTGGAT i mm10.chr7 I 326 I 1 s canFam3.chr1 19702040 180 - 122678785 TCAGACAGTGGATGGGTAG-CCAGACA----------TGGGGAGGAGGGCC------------------CAGGAG--------GTCACAGCGGG-ATGACCCAG-GTGCCCAAGA------AGGGAGAAGGTACACGTGG-GACAGAGCTGAGACAGGGTGGTGT--GAGGACAGAGAAGCATGTGTCAGATTAAGTTTGGCACCAAGAGGACCCTATGGTCCAGATG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60105675 43560 + 64156825 T a score=1680035.000000 s hg38.chr19_GL949748v2_alt 193328 571 + 1064304 -GGGGCGGG-ATCTCACCTGACTGTCCAGCTCCACCCTGTCCTCAGACTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCT-----GGTTCTCTGAGACCTCTCAGTCCTGCTGGCCCCCTGCCCTGCTCCCAGATGGGGCCACCGA-ATGCAGG-------------------GAGGTCCCACAGTGTGG---GGCAAGACCATCTTCCACGGAGC----CCCAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGGGACTCCTGTCTCT--CCAGCAC-CCCCATTTG-----TCCC----CTCTCTT-CCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCTGGACCTGGAG-GAGGACATGGGAGTGTGA-GGGGCAGTGTATGGGCTGT---GGTGGGTGGGAGTCTG-TGGTCTTTGGGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGTCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CTC-CCATTCTACACATGCAACTTGAG-GG-AAAGAAG s panTro4.chr19 59125109 570 + 63644993 -GTGGCGGG-ATCTCACCTGACTGTCCAGCTCCACCTGGTCCTCAGACTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCTT-----GGTTCTCTGAGACCTCTCAGTCCTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACCAAGATGCAGG-------------------GAGGTCCCACAGTGTGG---GGCGAGACCATCTTCCACGGAGC----CCCAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGGGACTCCTGTCTCT--CCAGCAC-CCCCATTTG-----TCCC----CTCTCTT-CCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCCGGACCTGGGG-GAGGACATGGGAGTGTGA-GGGGCAGTGTATGGGCTGC---AGTGGGTGGGAGTCTG-TGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGTCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CCC-CCATTCTACACATGCAACTTGAG-GG-AGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003560 570 + 60714840 -ggggcagG-GTCTCACCTGAGTGTCCAGCTCCACTCCGTCCTCAGGCTGTGTGTCCTTCACAGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTGTCTCCT-----GGTTCTCTGAGACCTCTCAGTCCTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACTGAGATCTAGG-------------------GAGGTCCCACAGTGTGG---GGCGAGACCATCTTCCATGGAGC----CCTAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGGGACTCCTGTCTCT--CCAGCAC-CCCCAGTTG-----TCCC----CTCTCTT-CCTCTTACAGAGCTTTTCTTCCTGGATGTCAGCAGCTGGGCTGGACCTGGAG-GAGGAAACGGGAGTGTGA-GGGGCAGTGTATGGGCTGC---GGTGGGTGGGAGTCTG-GGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCCACAGCCGCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CCC-CCATTCTACACATGCAACTTGAG-GG-AAAGAAG i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102774758 570 - 106955855 -agggcggG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGACTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCT-----GGTTCTCTGAGACCTCTCAGTCTTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACTGAGATCCAGG-------------------GACGTCCCACAGTGTGG---GGCAAGACCATCTTCCACGGAGC----CCCAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGGGACTCCTGTCTCT--CCAGCAC-CCCCATTTG-----TCCC----CTCTCTT-CCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCTGGACCTGGGG-GAGGACATGGGAGTGTGA-GGGGCAGTGTATGGGCTGC---GGTGGGTGGGAGTCTG-GGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCTCCTGTCCTTGGGCTCTGGCTCTGCAGCCTCTGCAGGACGCTGGGAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CCC-CCATTCTACACATGCAACTTGAG-GG-AAAGAAG i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60062115 567 + 64156825 -GGGGCGGG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTGTCTCCTGGGAAGGATCCCTGAGAGCTCTCAGTCCTGCCGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGG-------------------GAGGCCCCACAGTGGGG---GGCGAGACCATCTTCCACGGAGC----CCCAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGG-------GTCTCC--CCAGCAC-CCCCATTTG-----TCCC----TTCTCTT-TCTCTTACAGAGGTTTTCTTCCTGGATGTCAGCAGCTGCGCTGGACCTGGGG-GAGGACACAGGAGTGTGA-GGGGCAGTCTATGGGCTGT---GGCGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCTGCAGCCCCTGCAGGATGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTGAGCCCTGGGAACATTAGAA-CCC-CCATTCTACACAGGCAACTTGAG-GG-GAAGAAG i rheMac3.chr19 T 43560 C 0 s macFas5.chr19 55085558 567 + 59248254 -ggggcggG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCAGGGAAACAGCAAGGGCTTCGTCTCCTGGGAAGGATCCCTGAGAGCTCTCAGTCCTGCTGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGG-------------------GAGGCCCCACAGTGGGG---GGCGAGACCATCTTCCACGGAGC----CCCAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGG-------GTCTCC--CCAGCAC-CCCCATTTG-----TCCC----TTCTCTT-TCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGCGCTGGACCTGGGT-GAGGACACGGGAGTGTGA-GGGGCAGTATATGGGCTGT---TTCGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CCC-CCATTCTACACATGCAACTTGAG-GG-GAAGAAG i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47219639 591 + 51301725 -GGGGCGGG-GTCTCACCCGACTGTCCAGCTCCACCCTGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGCCAGAGCAAGGGGTTCGTCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCTGG-CCCCTGCCCAGCTCCCA-CTAGAGTAGCCGAGATCCAGGGAGCGACTGTGATGTCCCCGAGGTCCCATAGTGTGG---GTTCAGACCACCTTCCCCTTGGC----CCCAGACCCTTCCC---AGCCTGTGCTCATGCCCCCATTGCTACAGAAACTTTGG-------AGCCCC--CTTGCCCACCCCAGGTG---CCCCCC----TTTTCTTGTCACTCACTGAGAATTTCCTCCTGGGCGTCAGCAACTGGGCTGGCCCTGGGG-GAGGACACGGGAGTGTGA-GGGGCAGTGAGGGGCCTGTGCGGGCGGATGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCCGCAGGACCTGGTCCTTGGGCTCTGGCTCCGCAGCCCCTGCAGGACGGTAGAAA------------TGGGCTGGGCAGAGATGGACAGAGTGTCAGGCTTGGGAGAATTCGAA-CCAGCTGCCCTGCACACACAACttgagcag-aaagaaa i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46889651 567 + 50890351 -ggggcggG-GTCTCACCTGACTTTCCAGCTCCACCCCATCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCAGGGACAGAGCAAGGGGTTTGTCTCCTGGGAAGGATCCCTGAGACCTCTGAGTCCCGCTGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGG-------------------GAGGTCCCACAGTGGGG---GGCGAGACCATCTTCCATGGAGC----CCCAGACCCTTCCC---AGCCCCT--------CCCTGTTGCTACTGAAATTTTGG-------GTCTCC--CCAGCAC-CCCCATTTG-----TCCC----TTGTCTT-TCTCTTACAGAGATTTTCTTCCTGGACGTCAGCAGCTGTGCTGGCCCTGGGG-AAGGACACGGGAGTGTGA-GGGGCAGTATATGGGCTGT---GGTGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGACTCTGGCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTCCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CCC-CCATTCTACACATGCAACTTGAG-GG-GAAAAAA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45541027 578 + 49145316 -GGGGCGGG-GTCTCACCTGAGTGTCCAGCTCCACCTCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGG-CAGAGCAAGGGGATTGTCTCCTGGGAAGTTTCCCTGGGATGTCTCAGCCCCGccag-cccctgcccagctcccagatggggcagctgagatccagggaggggttgtgatgtccc-aaggtcccaca------------------------CCCTGAGC----CCCAGACCCCTTCC---AGCCTCTGCCCTTT-CCTCATTGCGATGGAAACTGTGG-------GTCCCC--ATCTCCC-TCCTGGCTGGGGTCACCT----CTTCCTG-TCACTCACAGAGAGTTTCTTCTTGGGTGTCGGCAGCTGGGCTGGATCTGGGG-GAGGACACAGGAGCTGTA-GGAGCAGTGTGTGGGCTGG---GGTGAGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCTGCAGGCCTCCGCCTGTGGGTTCTGGCTTCACAGCCCCTGCAGGATGTTGGAAATCAGCCTCTCTCTGGGCTGTGTGAAGAAGGACAGAGTCTCAGCCTTGGGAACATTGGAA-CCATCTGCCCTGCAAACGCAGCTCGAA-GGTAAGGAAG i calJac3.chr22 I 1 C 0 s mm10.chr7 3713803 550 + 145441459 -AGGACAGGTGCCTTACCCAGCTGTTCAGCTCCACTCCATCCTCAGTTTGCATGTCCTCCACTGAAGCATCTGTCATAGCAGAACACATAGGATGTCTCCTGACTAGAGTCTA-GGGCTGTCTCAGACCCCTAGT-TTCCTGCCTTGCTCCAGGTTGGG---ACAGAGAATCAGG-------------------GAAAGCT---------G---GGACATCCCTGCTTCCATCAAGTGAAGTTCAGATCCGTACAATGAAACCCT--------CTCCAACACCCCGGTAATTCTGA-------AGCCCCAGCCATCTC-CCCC----------CCCCAGGACTCCCTT-TCTCTCACATAGGCTTTCTTCCTGGGTGGCAGCAGCTGGGTTGGGCCTGGAG---GGACAAGGAGACGTCACTTAGCAGTGAGATGTGTCA---TACGGGCAGGGGTCTA--GGTCTCT-GT----GATTTACCTCTTCTGGAGTTCTCCTTTCCTGGTTATGGGCTCTTCAGCTCCTGAAGAAAGTTGCAAGTCTTTCTCTTTCTGGACT--GCAAGGGAGG--GGAGTCTCAGC--TAGGAGGATGGGAAGCCC-CTCCCCTGGGCATG----TTCAG-GG-AAGGAAG i mm10.chr7 I 1 C 0 s canFam3.chr1 19702220 514 - 122678785 GGAGTGGGG-GTCTCACCCGATGGTCCAGCTCGACCCCTTCCTCAGGCCATGTGTCTTGCACAGCAGCATCTG-TGGAGTAGAAC--GGGGTGTGTGTCTTGGCG-GGTTCCCTGAGCTCTCTCAGGGGTGCAGA--CCCTGACCTGCTCCCAGATGAGGAGGCTGTGACCCAGG-------------------G-GATCCAGGGGTGAGGTTAGGTGCTAAGATCATGCATGTGGG----AATTG------------AGTCCTT--------ACCCCTTACCCCAAACCTTCCAG---------------CCCACCC-CCAAGGCAG-----CCCC---------TT-CCTCTCACAGAGGGTTTCCTCCTGGGTGGTAGCAGCTGGGCTGGAGCTGGGGAGGAGACATGG---TGTCA-GAGGGCATGCAGGGGGTG----GGTGGGTGGGAGTCTGGGGGTCTGT-GGGCAGGAGTTACCTGTCCTGCAGGCCTCTGTCCTTGGGCTCTGGGTCTGCATCCCCTGCAGGACATTAGGAATCAGCATCCCTCTGGAATGGG-----------------------------AGGTTACAA-CCT-CCTGCCTCCATGTGATACC--AG-GG-AAAGGAG i canFam3.chr1 C 0 I 125 a score=11595.000000 s hg38.chr19_GL949748v2_alt 193899 4 + 1064304 GAAA-------- s panTro4.chr19 59125679 4 + 63644993 GAAA-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004130 4 + 60714840 GAAA-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775328 4 - 106955855 GAAA-------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062682 4 + 64156825 GAAA-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086125 4 + 59248254 GAAA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220230 4 + 51301725 gaaa-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890218 4 + 50890351 GAAA-------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541605 4 + 49145316 GAAA-------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3714353 4 + 145441459 GAAG-------- i mm10.chr7 C 0 I 23 s canFam3.chr1 102997924 11 + 122678785 -AAAGGGTTCTA i canFam3.chr1 T 5795 C 0 a score=82266.000000 s hg38.chr19_GL949748v2_alt 193903 41 + 1064304 ACTAAAAATATTCCTGCATGGATGTTCCAAATATTTTATGA s panTro4.chr19 59125683 39 + 63644993 ACTAAAAATATTCCTGCATGGATGTTCCAAATATTTCAT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004134 39 + 60714840 ACTAAAAATATTCCTGCATGGATGTTCCAAATATCTCAT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775332 41 - 106955855 ACTAAAAATATTCCTGCCTAGATGTTCCAAATATTTCATGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062686 41 + 64156825 ACTAAAAATATTCCTGCATAGATGTTTCAAATATTTTATGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086129 41 + 59248254 ACTAAAAATATTCCTGCATAGATGTTTCAAATATTTTATGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220234 41 + 51301725 cctggaGGCCCACTGGCCCTGAGGTTTTAAATACAtcataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890222 41 + 50890351 ACCAAAAATATTCCTGCATCGATGTTTCAAATATTTTATGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541609 41 + 49145316 CCTGGACACACTCTTGCTTCCATGCTCCAAACGTCTCAAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102997935 39 + 122678785 AATAAACA-AAGCTTGTATGTGTGTT-CAAACATTTCATAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3714357 23 + 145441459 I a score=-11702.000000 s hg38.chr19_GL949748v2_alt 193944 15 + 1064304 ------------G---ATAGAAAAAAAC-TC s panTro4.chr19 59125722 15 + 63644993 ------------G---ATAGAAAAAAAA-CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004173 14 + 60714840 ------------G---ATAGAAGAAAA--CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775373 14 - 106955855 ------------C---ATAGAAAAAAA--CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062727 13 + 64156825 ------------G---ATAGAAAAAACT--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086170 13 + 59248254 ------------G---ATAGAAAAAACT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220275 15 + 51301725 ------------atttaaagtaaaatc---- i papAnu2.chr19 C 0 I 69 s chlSab2.chr6 46890263 14 + 50890351 ------------T---ATAGAAAAAAACT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541650 13 + 49145316 ------------G---ATGGAGAGAGCC--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3714380 13 + 145441459 ------------G---TGAGGAAATGTC--- i mm10.chr7 I 23 C 0 s canFam3.chr1 102997974 25 + 122678785 GCTTGAAAAGGCA---AAAGAAATATTC--- i canFam3.chr1 C 0 C 0 a score=61256.000000 s hg38.chr19_GL949748v2_alt 193959 44 + 1064304 CCATGA-ATAC-TGAA------------------GTTTGTAA-------ATGCGTATTGAAATTACGTGCC s panTro4.chr19 59125737 44 + 63644993 CCATGA-ATAC-TGAC------------------GTTTGTAA-------ATGCGTGCTGACATTACATGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004187 44 + 60714840 CCACGA-ATAC-TGAC------------------GTTTGTAA-------ATGTGTGCCGACATTACGTGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775387 44 - 106955855 GCATGA-ATAC-TGGA------------------GTTTGTAA-------ATGCGTGCTGACATTACGTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062740 44 + 64156825 CCATGA-ATAC-TGAA------------------GTTTGTAA-------ATGTGTGCTGACATTACGTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086183 44 + 59248254 CCATGA-ATAC-TGAA------------------GTTTGTAA-------ATGTGTGCTGACATTACGTTTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46890277 44 + 50890351 CCATGA-ATAC-TGAA------------------GTTTGTAA-------ATGCGTGCTGACATTACGTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541663 45 + 49145316 CAAAGG-ACGCTTTAC------------------ATTTGTAT-------GTGGGGACTGACACTAAGTGCT i calJac3.chr22 C 0 I 24 s mm10.chr7 3714393 52 + 145441459 CCAGAACATGG-TAAT------------------GTTCACAGGCATTGCATAGATTCTGAGACCAATTGCC i mm10.chr7 C 0 I 6 s canFam3.chr1 102997999 49 + 122678785 ACAAGT-ATAT-TCACATGGACCCCTCTTTCTGGGTTTCTCA-------TTGGGAGAT------------- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47220290 69 + 51301725 I a score=6667.000000 s hg38.chr19_GL949748v2_alt 194003 2 + 1064304 CC s panTro4.chr19 59125781 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004231 2 + 60714840 CC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775431 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062784 2 + 64156825 CC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086227 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220359 2 + 51301725 TC i papAnu2.chr19 I 69 C 0 s chlSab2.chr6 46890321 2 + 50890351 CC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541732 2 + 49145316 GC i calJac3.chr22 I 24 C 0 s mm10.chr7 3714451 2 + 145441459 TC i mm10.chr7 I 6 C 0 s canFam3.chr1 102998048 2 + 122678785 CC i canFam3.chr1 C 0 n 0 a score=1091059.000000 s hg38.chr19_GL949748v2_alt 194005 369 + 1064304 TGGAACCGGT---TTTCTAAACTG-ACACC-CCTGTGTGTTTGGGTTCCCTCTGGCTGGTGCCCTGAGCCCACCCTCGG-------------------TCGACCCA-----------------TGGGTCCC------CCGCTTCCCTACTCACCAGATGTCCTGTGTTTGCTGTGACGCTGACGTCggaggaggaggaa------gaggaggaggaagagcagcaggacgaAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CATGA-GGACGTCAGGAGTGG-G--AATGAtgtcattgatgtgagcacctactgtgtg-caggcgcgagccaggtcttt-ccttcgtgacctccaaccctcacaagcagtcgtgcaacatggaattg-----ccac--ccgtacaacccatttc s panTro4.chr19 59125783 369 + 63644993 TGGAACCGGT---TTTCTAAACTG-ACACC-CCTGTGTGTTTGGGTTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGG-------------------TCGGCCCA-----------------TGGGTCCC------CCGCTTCCCTACTCACCAGATGTCCTGTGTTTGCTGTGACGCTGACGTCggaggaggaggaa------gaggaggaggaagagcagcaggaCGAAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CATGA-GGACGTCAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgagccgggtcttt-ccttcgtgacctccaaccctcacaagcagtcgtgcaacatggaattg-----ccac--ccgtacaacccatttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004233 364 + 60714840 TGGAACCGGT---TTTCTAAACTG-ACACC-CTTGTATGTTTGGGTTCCCTCTGGCTGGCGCCCTGAGCCCACCCTTGG-----------------------CCCA-----------------TGGGTCCC------CTGCTTCGCTACTCACCCGATGTCCTGCGTTTGCTCTGACGCTGACGTCggaggaggaggaa------gaggaggaggaggagcagcaggaCGAAGGCCACCGATACCCCAATCAAAATCTCCAGGTATCTTCCCAGACCTTGA-CATGA-TGACGTCAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgtgctgggtcttt-ccttcatgagctccaaccctcacaagcagtcgtgcaacatggaattg-----ccgc--cc-cacaacccatttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775433 364 - 106955855 TGGAACCAGT---TTTCTAAACTG-ACACC---TGTGTGTTTCGGTTCCCTCTGGCTGGTGCTCTGAGCCCACCCTCGG-------------------TCGGCCCA-----------------TGGGTCCC------CCGCTTCCCTACTCACCAGATGTCCTGTGTTTGCTCTGACGCGGACGTCggaggaggaggaa------gaggaggaggaagagcagcaggacgaAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CAT----GACGTCAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgagccaggtcttt-ccttcatgacctccagccctcacaagcagtcgtgcaacatggaattg-----ccgc--ccccacaacccatttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062786 358 + 64156825 TGGAACCGGT---TTTCTAAACTG-ACACC-CCGGTGAGTTTGGGTTCCCTCTGGCTGGTG---------CACCCTCCG-------------------TCGGCCCA-----------------TGGGTCCC------ACAATTCCCTACTCACCCGATATCTTGTGTTTGCTCTGACGCTGACGTCggaggacgaggaa------gaggaggaggaagagcagcaggaCGAAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTTCCCAGACCTTGAGCATGA-TAA---CAGGAGTGG-G--AATGACGTCACTGATGtgagcacctactgtgtg-caggtgcgtgccaggtcttt-ccttcaagacctacaacccttacaagcagttgtgcaacatggaattg-----ccgc--ccccacaacccatttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086229 358 + 59248254 TGGAACTGGT---TTTCTAAACTG-ACACC-CCGGTGAGTTTGGGTTCCCTCTGGCTGGTG---------CACCCTCCG-------------------TCGGCCCA-----------------TGGGTCCC------ACAATTCCCTACTCACCCGATATCTTGTGTTTGCTCTGACGCTGACGTCggaggacgaggaa------gaggaggaggaaaagcagcaggacgaAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTTCCCAGACCTTGAGCATGA-TAA---CAGGAGTGG-G--AATGACGTCATTGACGTGAGCACCTACTGTGTG-CAGGTGCGTGCCAGGTCTTT-CCTTCAAGACCTCCAACCCTTACAAGCAGTTGTGCAACATGGAATTG-----CCGC--CCCCACAACCCATTTC i macFas5.chr19 C 0 I 31136 s papAnu2.chr19 47220361 365 + 51301725 TGGAGCAGTT---TTTCTAAGCTG-AGTTT-CCTGTGTGTTTGGGTTCCCTTTAGCTGGTGCCCTGAGCCCACCCTCGG-------------------TCAGCCCA-----------------CGGGTCAC------CCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGtcggaggaggaagaa------gaggaggaggaagagcagcagGATGAAGGCCACTGAGACCCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCGTGA-TGACGTCAGGAATGG-G--TATGACGTCATTGAtgtgagcacctactgtgtg-caggcgCGAGCTAGGTCTTT-CCTTCATGAGCTCCAACCCTCAC-AGCAGTCGTGCAACATGGGATTG-----CCAA--CCCC----CCAATTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890323 358 + 50890351 TGGAACTGGT---TTTCTAAACTG-ACATC-CCTGTGTGTTTGGGTTCCCTCTGGCTGGTA---------CACCCTCCG-------------------TCGGCCCA-----------------TGGGGTCC------CCACTTCCCTGCTCACCCGATATCTTGTGTTTGCTCTGACGTTGACGTCggaggacgaggaa------gaggaggaggaagagcagcaggatgaAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTCCCCAGACCTTGAGCATGA-TAA---CAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgtgccaggtcttt-ccttcaagacctccaacccttacaagcagttgtgcaacatggaattg-----ccgc--ccccacaacccatttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541734 376 + 49145316 TAGAACAGTT---TCTCAAAGCTGCGTTTT-CCCAGCAGTTTGGATTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGG-------------------TTGGCCCA-----------------CGGGGTCC------CCCCTTCTATACTCACCTGATGTCCAGTGTTTGCCCTGACGCTGATGTCggaggacgaggaagaggaggaggaggaggaagagcagcaggaTGAAGGTCACTGAGACCCCGGTCACAACCCCCAGGTTCCTTCCCAGACCTTGAGCATGA-GGACGTCAGGAATGG-G---GTGGTGTtactgat-tgagcgcctactgtgtg-caggtgactgctcggcctct-tattcaccaccttcaacccccacta-cagtcgagcagcgcggaattg-----acacatccaccccacccacttt i calJac3.chr22 C 0 C 0 s mm10.chr7 3714453 399 + 145441459 TGTGATCTGCACGTTTCTAAGCTA-CCCTG-CCCCAGGTTGAGCTTTCCCTATGGCTGGTG-TCTGAGCGCCTGCTTCGATGTTCACAGGGAGACACACCACCTCC-----------------TGAGACCCAAGTTACACATACCCTCCTCACCATCTTTCCTGAATTTTCCCCGATGTCTTCGTCGAAGAAGAATGAA------GATGAAGATGAAGAGGAACAGGATGAAGGCCACAGACACTCCAATGAGAGCCTTCAGGTACATATGCAGTCCTGAGGCACAAGTGACATCATTAGTGGAG--ACCTTTGCTGCTTACctgagcacctactgtgtgacaggctcatgctgggtctctgcacacaTCATCCCCCATCTTTACAA----TCATGTACCATGGAATTGTGTCTTTTc--ctgtccagccagt--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19702859 387 - 122678785 TGGAA---GT---GTCCTACATCG-GCCTTTCCCACCTCTCTGGGTTCCCTCTGGCTGCTGCCCTGAGCCCACCCTGGG-------------------TCAGCCCACAGAGCACCACCACCCCTGGGGTGC------CTCAGCCCCTTCTTACTTGACTTCCTGCATTTGCCCCGACGTTGCTGTCGGACCAGGAAGAG------GATGAGGAGGCAGAGCATCAGGATGAAGGCCACCGAGGACCCGATGAGGACGTACAGGTACCAGCTAGGACCTTGGGCAGGAGCTATACCATGAATGA-GCCAGTGATTCCATtttactgagcacctactgtgtgccaggcacctgctgggctctg-tgcttgc-acctgtgactctgacaa-tgatcatgcagcaggggattg-----ctgt--ccctcccacctgctcc i canFam3.chr1 I 125 C 0 a score=99128.000000 s hg38.chr19_GL949748v2_alt 194374 43 + 1064304 acagatgcacaaactgaggctcagagcagggagtcgcctgccc s panTro4.chr19 59126152 43 + 63644993 acagatgcacaaactgaggctcagagaggggaatcgcctgccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004597 43 + 60714840 acagatgcacaaactgaggctcagagcgggtagtcgcctgccc i ponAbe2.chr19 C 0 I 323 s nomLeu3.chr10 102775797 43 - 106955855 acagatgcacaaactgaggctcagagcggggaatcgcctgccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063144 43 + 64156825 acagatgcacaaactgaggctcagagaagtgaaccgcctgtca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47220726 43 + 51301725 ACAGaggagcaaactgaggctcagagaggagaatCGCCTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890681 43 + 50890351 atagatgcacaaactgaggctcagagaggggaatcgcctgccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542110 42 + 49145316 acagacaaa-aaactgaggctcagagaggggagtcgcctgccc i calJac3.chr22 C 0 C 0 s mm10.chr7 3714852 10 + 145441459 ---------------------------------tcacctgact i mm10.chr7 C 0 C 0 s canFam3.chr1 19703246 42 - 122678785 acagac-tgtaaactgaggcacagaggggtcaatcacgtgtcc i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 31136 + 59248254 I a score=3893.000000 s hg38.chr19_GL949748v2_alt 194417 2 + 1064304 ca s panTro4.chr19 59126195 2 + 63644993 cg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775840 2 - 106955855 cg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063187 2 + 64156825 ca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47220769 2 + 51301725 CA i papAnu2.chr19 C 0 I 501 s chlSab2.chr6 46890724 2 + 50890351 ca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542152 2 + 49145316 ca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703288 2 - 122678785 ca i canFam3.chr1 C 0 C 0 e mm10.chr7 3714862 0 + 145441459 C e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 31136 + 59248254 I a score=4683.000000 s hg38.chr19_GL949748v2_alt 194419 2 + 1064304 gg s panTro4.chr19 59126197 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775842 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063189 2 + 64156825 ga i rheMac3.chr19 C 0 I 41 s papAnu2.chr19 47221272 2 + 51301725 GG i papAnu2.chr19 I 501 C 0 s chlSab2.chr6 46890726 2 + 50890351 gg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45542154 2 + 49145316 gg i calJac3.chr22 C 0 I 1 s canFam3.chr1 19703290 2 - 122678785 gg i canFam3.chr1 C 0 C 0 e mm10.chr7 3714862 0 + 145441459 C e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 31136 + 59248254 I a score=38361.000000 s hg38.chr19_GL949748v2_alt 194421 30 + 1064304 -cctccagcgaggaagcggcagagctgggaa s panTro4.chr19 59126199 30 + 63644993 -cccccagcaaggaagcagcagagctgggaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775844 30 - 106955855 -cccccagccaggaagcggcagagctgggaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47221274 30 + 51301725 -CCCCACGGTGGGATGCAGCCGAGCTGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890729 30 + 50890351 -cccccagccaggaagtggcagagctgggaa i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45542157 30 + 49145316 -cccccagctaggcagcagcagagctgggaa i calJac3.chr22 I 1 C 0 s mm10.chr7 3714862 15 + 145441459 -----------ggaagtggcagagtt----- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703292 31 - 122678785 tcgtccagtgtggaggtggcagggctgggac i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 31136 + 59248254 I e rheMac3.chr19 60063191 41 + 64156825 I a score=191697.000000 s hg38.chr19_GL949748v2_alt 194451 136 + 1064304 gggagcccgggag--------tctgacctg---------------------cagcccttgttcct--------gcaccaGAGCCGAGACCCG-GAGCTGC-----AGGGAAAGAGCCTGACC----------GTCCTGAACCACGG---------------------------------CCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCACTGCTGCAG s panTro4.chr19 59126229 136 + 63644993 gggagctcgggag--------tctgacctg---------------------cagcccttgttcct--------gcaccaGAGCCAAGACCCG-GAGCTGC-----AGGGAAAGAGCCTGACC----------ATCCTGAACCACAG---------------------------------CCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCACTGCTGCAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775874 136 - 106955855 gggagcccgggag--------tctgacctg---------------------cagcccttgttcct--------tcACCAGAGCTGAGCCCCG-GAGCTGC-----AGGGAAAGAGCCTGACC----------TTACTGAATCACTG---------------------------------CCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCTCTGCTGCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063232 137 + 64156825 gagaaccgggaag--------tctgacccg---------------------cagcccttgttccc-------tgcaccgGAGCTGAGCCCCA-GAGATGC-----AGGGAAAGAACCTGACC----------GTCCTGAACCACAG---------------------------------CCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCACCGCTGCAG i rheMac3.chr19 I 41 C 0 s papAnu2.chr19 47221304 137 + 51301725 GTGAACCCGGGAG--------TCTGACCTG---------------------CAGCCCTTGTTCCC-------AGCACCAGAGCCGAGCCCCA-GAGATGC-----AGGGAAAGTGCCTGAAT----------GCCCCAAACCATGG---------------------------------CCCTGCTCCCCTCCTCCGCCCC----AGGTCACC------GTCACTGCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890759 127 + 50890351 gggaacctgggag--------tctgacccg---------------------cagcccttgttccc-------agcaccaGAGCTGAGCCCT----------------GGAAAGAGCCTGACC----------GTCCTGAACCACGG---------------------------------CGCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCACTGCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542187 163 + 49145316 gggaacctgggAG--------TTTGATCTGCTGAGAGCCAGGGAAGGAGGACAGCCCTTGTTCCC-------TGCACCTGAGCTGAGCCCTG-GAGCTGC-----AGGGAAAGAGCGTGACC-----------TACTGAACCAAAG---------------------------------CCCTGCTCCCCTCCTCTGCCCC----AGGTCACCGTCACTGTCACTGCTGCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3714877 122 + 145441459 --gaacccagaat-------ctctgacttc---------------------cagccctgctctct--------gcaccaGAGCTGAGAGCAATGAGTTG--------GAGAGGAGTGTGAAT----------GTCGTG--CTATGG---------------------------------CTGTGTATCCCACCCTTACTC-----------AT------GTCGCTACAGC-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703323 203 - 122678785 aggaagttgggatgaaggttccctgtgctc---------------------tACTCATGCCTCCCCTGTGAGGTCACCA-CTCCGAGGCTCT-GGGCTCCTCATTTGGGGCAGGATCTGTCCCAGCATCTTCATCCTGAGCTGAGGGTCCTTCCAGACCTCAACACCCCCAGCCATCAACTTCCCTCTCCTCCCCTCCTCCTACAATATCACT------GTCATTGCTGCAG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 31136 + 59248254 I a score=186268.000000 s hg38.chr19_GL949748v2_alt 194587 107 + 1064304 GTGGGACGGGACAGGCCCCTGT---GGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGGgtcagagctgaaaggaactttcccac s panTro4.chr19 59126365 107 + 63644993 GTGGGACAGGACAGGCACCTGC---GGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGGCACAGCTGGGGgtcagacctgaaaggaactttcccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004963 105 + 60714840 GTGGGACAGGACAGGC-CCTGC---AGAATCA-GGTTTGGGAGG-TTCCCT-GGAAGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggagctttcccac i ponAbe2.chr19 I 323 C 0 s nomLeu3.chr10 102776010 107 - 106955855 GTGGGACAGGACAGGCCCCTGC---GGAGTCA-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagaactgaaaggaactttcccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063369 107 + 64156825 GTGGGACAGGACAGGCCCCTGT---GGAATCG-ACTCTGGGAGCCTTCCCT-GGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47221441 32 + 51301725 GTGGGACAGGACAGGCCCCTGA---AGAA-------------------------------------------------------------------------------TCCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890886 108 + 50890351 GTGGGACAGGACAGGCCCCTGC---GGAATCG-GGTCTGGGAGGCTTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542350 108 + 49145316 TTGGGACAGGACAGGCTCCTGA---GGAATCA-GGCCTGGGAGGCTTCCCTAGGTGGCCTCCTCTCTCAG--GAGGTCACAGCTGGGAgtcagagctaaaaggaactttcccac i calJac3.chr22 C 0 C 0 s mm10.chr7 3714999 91 + 145441459 GTGGCTCTGGGC-----CCTGC---AGAATCA-GATTCTGGAGG-------------CCTTTTCTGTCAGGAGAGGTCACCACCAAG-GCCAGCACAGaaacaaacaaacaaac i mm10.chr7 C 0 I 106 s canFam3.chr1 19703526 103 - 122678785 ------AGGGACAGACACCTTCCCTAGAATCATGATTTGGGTAACTTCCCCATGAGCCCTCCTCTCCCag--gaggtcagagccatg-gtcagaacc--aaggacaaatctaat i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 31136 + 59248254 I a score=352036.000000 s hg38.chr19_GL949748v2_alt 194694 167 + 1064304 c--c----------------------acaggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccacatcaccacctccagaggagcctgaacctaggacagaacccacccctgcctcccCTGGACCCCGCCCATCTCCCACT--CAGAGCCCCTCACTCACGATTCTGAGG s panTro4.chr19 59126472 167 + 63644993 c--c----------------------gcaggcctctctcctttacacttggagaaactgagtcccatgcaggggaggggcctgtccacatcgccacctccagaggagcctgaacctaggacagaacccacccctgcctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCGCCACTCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005068 165 + 60714840 c--c----------------------gcaggcctctctcctttacacttggagaaactgaggcccaggcagggga-gggcccgtccacatcgccacctccagaggagcctgaacctaggacagaacccactcctacctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCTGAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776117 166 - 106955855 c--c----------------------gcaggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccaCATCGCCACCTCCAGAGGAGCCGGAACCTAGGACAGAACTGACCCCCGCCTCCCCAGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063476 166 + 64156825 c--c----------------------gcaggcttctttcctttacacctggagaaactgaggcccaggcagcggaggggcctgtccacgtcaccatctccagaggggcctgaacctaggacagaagccacctctgcctcccCAGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCTGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47221473 168 + 51301725 CTGT----------------------GCAGGCCTCTCTCCTTTACacctggagaaactgaggcccaggcaggggaAGGGCTTGTGCACATCACCATCTCCAGAGGAGCCTGAACCTAGGACAGaacccacccctgcctccccaggaccccgtccacctcccact--cagagcccc-cactcaccactcTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890994 166 + 50890351 c--c----------------------gcaggcttctttcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccacgtcaccatctccagaggggcctgaacctaggacagaagccacccctgcctcccCGGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCTGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542458 128 + 49145316 c--ct---------------------gcaggcctctctcctttacacttggagaaactgaggcctaggcaggggaggggcct----------------------------------------GAACTGAGCCCTGCCTCCCCTGGACCCCACCCACCTCCCGCT--CAGAGACCCCGACTAACCACTGTGGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715196 173 + 145441459 ----CCAAATAAGTTAAGACATGAGGGCAGGTTTCT---CTTTATACTCAGAGGAACAGCAGCCTA-GCAAGAGAAGGACTTGACCAAGTCAAGCTATCTAGAGGCAGCTGTATCAAGACTCTAACTAGCTATTG-TTCATCTGA-----GCACATATTTTAA---CAAACTGTT-TATTAGTC-TTCTGAG- i mm10.chr7 I 106 C 0 s canFam3.chr1 19703629 160 - 122678785 ---------------------ctgggccatgactctctcttttacacttggggaaactgaggcccacacatgggaggggcatgtccaagacagggaatgtagagggtcatgaagtgagggtgtaaatcagccctgatccccaTGA--CCCACCCACCACCTCCTGACAGAGACCCTCACTTAC---------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 31136 + 59248254 I a score=297134.000000 s hg38.chr19_GL949748v2_alt 194861 109 + 1064304 GCCTGACCCTGGGGGGTTAAGGGGCTGGTCCTCAGGACCTCCT-GGGTCAGGACAGGG--AGGTGAAGGCTGGGGCTGTCTTGCCCCCCACATCAGCCCGGCTCCTCCTCCT-- s panTro4.chr19 59126639 109 + 63644993 GCCTGACCCTGGGGGGTTGAGGGGCTGGTCCTCAGGACCTCCT-GGGTCAGGACAGGG--AGATGAGGGCTGGGGCTGTCTTGCCCCCCACATCAGCCCGGCTCCTCCTCCC-- i panTro4.chr19 C 0 I 3 s ponAbe2.chr19 56005233 108 + 60714840 GCCTGACCCTGCGGGGTTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGGACAGGT--AGGTGAGGGCTGGGGCTGCCTTGCCCCCCACATCAGCCTGGCTCC-CCTCCC-- i ponAbe2.chr19 C 0 I 3 s nomLeu3.chr10 102776283 109 - 106955855 GCCTGACCCTGAGGGGCTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGGATGGGG--AGGTGAGGGCTGGGGCTGCCTTGCCCTCCACGTTAGCCGGGCTCCTCCTCCC-- i nomLeu3.chr10 C 0 I 10613 s rheMac3.chr19 60063642 109 + 64156825 GTCCGACCCCGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGCGGCTGCCCTGCTCCCCACGTCAGCCCGGCTGCTCCTCCC-- i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55117723 109 + 59248254 GCCTGACCCTGAGGGGTTGAGGGGCTGGTCCTCAGGACCTCTG-GGGTCAGGACAGGG--AGGTGAGGGCTGAGGCTGCCTTGCTCCCCACATGAACCCAGCTGCTTTTCCC-- i macFas5.chr19 I 31136 I 3 s papAnu2.chr19 47221641 109 + 51301725 GTCCGACCCCGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGGGGCGGCCCTGTTCCCCACGTCAGCCCGGCTGCTCCTCCC-- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 46891160 109 + 50890351 GCCTGACCCTGAGGAGTTGAGGGGCTGGTCCTCAAGGCCTTCT-GGGTCAGGACAGAG--AGGTGAGGGCTGGGGCTGCCCTGCCCCCCATATCAGCCTGGCTCCTCCTTCC-- i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45542586 109 + 49145316 ATCTGGCTCCATGGGAGTGAAAAGCTGGTCCTCAGGGACTGCT-GGGTCAGGATGGGG--ACATGAGGATTGGGGCTGACCTGCTCCCCATGTCAGTCCGGCTGCTCCTCCC-- i calJac3.chr22 C 0 I 3 s mm10.chr7 3715369 105 + 145441459 GCCTGACTCCATGCAGGTGACAGG--GGCCATGCCGAGCTTTA-GGGGTAAGATAGGG--AACTGAGTGTTTGTGTT-CCCTGCTTTCAACTTCC-CACAACTGCCCCACCC-- i mm10.chr7 C 0 I 3 s canFam3.chr1 19703789 76 - 122678785 -----------------------------CCTCAGAGACTCCTGGGGTCAGTAGAGGGTCAGGGGAGGGCCTGTGTG-------CTTCCACTGCA--CCTGCTGCCCCTCCCCC i canFam3.chr1 C 0 C 0 a score=205943.000000 s hg38.chr19_GL949748v2_alt 194970 71 + 1064304 GGCTGGGCCCCAACATCTCCCTCTGCCTCGA-CCCCCC-ACT--CTTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA s panTro4.chr19 59126751 71 + 63644993 GGCTGGGCCCCAACATTTCCCTCTGCCTCAA-CCCCCC-GCC--CCTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i panTro4.chr19 I 3 C 0 s ponAbe2.chr19 56005344 71 + 60714840 GGCTGGGCCCCAACATCTCCCTCTGCCTCGA-ACCCCC-GCC--CCTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i ponAbe2.chr19 I 3 C 0 s nomLeu3.chr10 102787005 72 - 106955855 GGCTGGGCCCCAACATCTCTCTCTGCCTTGA-CCCCCCTACT--CTTCACCAGCCCAGTCTCAGAGCCCC------------------TGGGA i nomLeu3.chr10 I 10613 C 0 s rheMac3.chr19 60063754 72 + 64156825 GGCTGGGCCCCAACACCTCCCTCTGCCTCGCGCCCCCC-GCC--CCTCACCGGCCCAGCCTCGGAGCCCC------------------TGGGA i rheMac3.chr19 I 3 I 81543 s macFas5.chr19 55117835 72 + 59248254 GGCTGGGCCCCAACACCTCCCTCTGCCTTGAACCCCCC-ACG--CCTCACCAGTCCAGCCTCAGAGTCCC------------------TGGGA i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47221753 70 + 51301725 GGCTGGGCCCCAACACCTCCCTCTGCCTCGA--CCCCC-GCC--CCTCACCGGCCCAGCCTCAGAGCCCC------------------TGGGA i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 46891273 72 + 50890351 AGCTGGGCCCCAACACCTCCCTCTGCCTTGAACCCCCC-ACT--CCTCAGCAGCCCAGCCTCAGAGTCCC------------------TGGGA i chlSab2.chr6 I 4 C 0 s calJac3.chr22 45542698 65 + 49145316 GGCTGGGCCCCATCATCTCCCACTGCCTCGA-CCTCCT-GCC--CCTCA-----CCAGCCTCAGAG-CCC------------------TGGGA i calJac3.chr22 I 3 I 7 s mm10.chr7 3715477 81 + 145441459 TGATGAGCCTAAATACTTCTCTCTGAAT----CTCCCT-GCT-------GTAGCCCAACCTCTGAGCCCCAGCTTCAGTGGTCTCTGGTGAGA i mm10.chr7 I 3 I 21 s canFam3.chr1 19703865 67 - 122678785 AGATGGGTCCCCACCCCTCCCTATCCCATGAACACCCA-GCCTCCTCCACCAGCCGAG-------ACCCC------------------TGGTG i canFam3.chr1 C 0 C 0 a score=9088.000000 s hg38.chr19_GL949748v2_alt 195041 20 + 1064304 --CACAAGCC--CGT---------------------------CCTTGAGGG s panTro4.chr19 59126822 20 + 63644993 --CACAAGCC--CGT---------------------------CCTTGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005415 20 + 60714840 --CACAAGCC--CGT---------------------------CCTTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787077 20 - 106955855 --CACAAGCC--CGT---------------------------CCTTGAGGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55117907 20 + 59248254 --CACAGGCC--TGT---------------------------CCTTGAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221823 42 + 51301725 -------GCC--TGTGGCCCCTCCTGTGGCTCTGCCTGGCTCCCTGGAGGG i papAnu2.chr19 C 0 I 20 s chlSab2.chr6 46891345 20 + 50890351 --CACAAGCC--TGT---------------------------CCTAGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542770 33 + 49145316 --CCCCTGTC--TGT--------------CTCTGCCCAGCCCTCTGGAGGG i calJac3.chr22 I 7 I 19 s mm10.chr7 3715579 13 + 145441459 --TACAAGCTGAAGT------------------------------------ i mm10.chr7 I 21 I 2 s canFam3.chr1 19703932 18 - 122678785 CCCATCGGCC--CCC---------------------------TTTCA---- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60063826 81543 + 64156825 I a score=117156.000000 s hg38.chr19_GL949748v2_alt 195061 47 + 1064304 GAGGGGAGTGGGATCCTTTGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC s panTro4.chr19 59126842 47 + 63644993 GAGGGGAGTGGGATCCTTAGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005435 47 + 60714840 GAGGGGAATGGGATCCTTAGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787097 47 - 106955855 GAGGGGAGTGGGATCCTTTGGGAGACTCA-GACTG----C-------CCCGGGGGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145369 48 + 64156825 GAGGGGAATGGGATCCTCTGGGAGACTCAGGACTG----C-------CCTGCGGGAGGC i rheMac3.chr19 I 81543 I 19 s macFas5.chr19 55117927 47 + 59248254 GAGGGGAATGGGAATCTTTAGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221885 48 + 51301725 GAGGGGAATGGGATCCTCCGGGAGACTCAGGGCTG----C-------CCTGGGGGAGGC i papAnu2.chr19 I 20 C 0 s chlSab2.chr6 46891365 47 + 50890351 GAGGGGAATGGGGTCCTTCGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542822 40 + 49145316 GAGTGGAACAGGATCCTCTGGGAGACCCGGGACTG----C-------CCAG-------- i calJac3.chr22 I 19 C 0 s mm10.chr7 3715594 54 + 145441459 GATAGAAATGAGGACTGTGGTGGGCCAAG-AGCTG----CCAGGCAGCCTGGGGTGGGA i mm10.chr7 I 2 I 1 s canFam3.chr1 19703950 33 - 122678785 --------------TCTCTGAGAGACTGG-AACCAAAGCC-------CCTGGACG---- i canFam3.chr1 C 0 C 0 a score=15433.000000 s hg38.chr19_GL949748v2_alt 195108 12 + 1064304 GGCGCTCCCCAC s panTro4.chr19 59126889 12 + 63644993 CGCGCTCCCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005482 12 + 60714840 CGCGCTCCCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787144 12 - 106955855 TGCGCTTCCCAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55117974 12 + 59248254 CGTGCTCCCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221933 12 + 51301725 CGTGCTCCCTCT i papAnu2.chr19 C 0 I 5 s chlSab2.chr6 46891412 12 + 50890351 TGCGCTCCCCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542862 4 + 49145316 --------CTGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3715649 12 + 145441459 AATACTCCCTGC i mm10.chr7 I 1 I 2 e canFam3.chr1 19703983 0 - 122678785 C e rheMac3.chr19 60145417 19 + 64156825 I a score=167836.000000 s hg38.chr19_GL949748v2_alt 195120 54 + 1064304 GAGGCCTCAGTGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGAGGCTGG s panTro4.chr19 59126901 54 + 63644993 GAGGCCTCAGTGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGAGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005494 54 + 60714840 GAGGCCTCAGTGACTCACCAGATGTGGAGGGCGGCCCTGTGGGTTGGGGGCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787156 54 - 106955855 GAGGCCTCAGAGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGGGGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145436 54 + 64156825 GAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTGGGTTGGGGGCTGG i rheMac3.chr19 I 19 I 168 s macFas5.chr19 55117986 54 + 59248254 GAGGCCTCAGTGACTCACCAGGGGTGGATGGTGGCCCTGTGGGTGGGGGGCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221950 54 + 51301725 CAGATCTCAGCGACTCACCAggtgtgggggtggagcctgtgggtggggggccgg i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 46891424 54 + 50890351 GAGGCCTCAGTGACTCACCAGGTGTGGAGCGTGGCCCTGTGGGTGGGGGGCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542866 54 + 49145316 GAGGCGTTAGTTACTCACCAGGTGTGGGGGTGGGACCGGTGGGTGGAGGGCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715663 54 + 145441459 AGAGTACCTGATACTTACCACCTAGTGGCATGGACATTGTGGGTGGCGGGGTAG i mm10.chr7 I 2 C 0 s canFam3.chr1 19703983 54 - 122678785 GACGCCCCTGTAACTCACCAGCTGTTGGGCTGGATATTGTGGGTGGGGGACCAT i canFam3.chr1 C 0 C 0 a score=255997.000000 s hg38.chr19_GL949748v2_alt 195174 178 + 1064304 AGCCTCCAGAGTGTCCT-G-GAAGGAGCACGGGAGGCGGGTGAGGGGCGGGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCACTCTCCTGCTTCCGCCCAGTGGATTCCCTGGAACCATCTCTCTGCCCACCTGGTGCCTTCTGCATGCCAGGCAGGGGAGAAC--GGGTGGCCACGCCTA s panTro4.chr19 59126955 178 + 63644993 AGCCTCCAGAGGGTCCT-G-GAAGGAGCACGGGAGGCGGGTGAGGGGCGGGGGCCGTCCATGGAGTGTACCCTTCCACT---CCCACTCTCCTGCTTCCGCCCAGTGGATTCCCTGGAACCATTTCTCTGCCCACCTGGTGCCTTCTGCATGCCAGGCAGGGGAGAAC--GGGTGGCCATGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005548 178 + 60714840 AGCCTCCAGAGGGTCCT-G-GAAGGAGCACAGGAGGCGGGTGAGGGGCTGGGGCTGTCCATGGAGGGCACCCTTCCACT---CCCACTCTCCTGCGTCTGCCCAGTGGATTCCCTGGAACCATTTCTCTGCCCACCTGGTACCTTCTGCATGCCAGGCAGGGCAGAAC--AGGTGGCCATGCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787210 178 - 106955855 AGCCTCCAGATGGTCCT-A-GAAAGAGCACAGGAGGCGGGTGAGGGGCTGGGGCTGTCCATGGGGTGCACCCTTCCACT---CCCACTCTCCTGCATCCGCCCAGGGGATTCCCTGGAACCATTTCTCTGCCGACCTGGTACCTTCTGCATGCCAGGCAGGGGAGAAC--GGGTGGCCATGCCTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55118040 176 + 59248254 AGTCTCCAGAGGGTCCT-G-CAAGGAGCACAGGAGGCCGGTGAGGGACTCGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCACTCTCCT-CATCCGCCCAGTGGATCCCCGGGAACCATTCCTCTGCCCACCTGGTACCTTCTGCATGCCAGGCAAGG-AGAAC--GGGTGGCCATGCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47222004 177 + 51301725 ggtccccagagggtcctgg-gAATAAGCACAGGCAGGGAGTGAGGAGCTTTGG----TGCTGGAGTCCCCTCCTCCACTGAGACCCCTCCCTC-CACCTGCTCTGTGGCTTCTCCGGAACT-TCCTTCTGCTTACCTTTCACCTTTTGTGTCCCAGGAGATG-GGGCCAAGGGTGGGCATGCCTG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46891478 176 + 50890351 AGCCTCCAGAGGGTCCT-G-CGAGGAGCAC-GGAGGCGGGTGAGGGACTGGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCACTCTCCTGCATCTGCCCAGTGGATCCCCAGGAACCATTTCTCTGCCCACCTGGTACCTTCTGCATGCCAGGCAAGG-AGAAC--GGGTGGCCATGCCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542920 175 + 49145316 GTCCACTGGAGGGTCCT-G-GGTAAGGAATGGGAGGAGGCAGAGGAGCT-GGGCCTTGCCTGAAGCCTCCACCTCAAAC---CAAATTTCTCCACATCAGCCCTGTGGCCCTCCTGT--CCCCTCCCCTACCCGCCTCTCCTCTTCATGATGCTGGCGATGCTGCTGA--GGGTGGGTGTGCCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715717 169 + 145441459 AGGTTTCGATGGGTCCTAG-GAAAGAGAACAAGAAGAGGACGAGGATTAGATGCAAGCCCAGGA-------TCCTCACTTGGTTCACTGTCCTCTATCTGCCCTGTAAACTCTGCAAGATACTGATAGTCGCTACTCCAAACCT---AGATTGCAGTAGAGG---ACT--GAGTGGACATTACTC i mm10.chr7 C 0 I 3 s canFam3.chr1 19704037 169 - 122678785 GGTGTCCAGAGGATCCT-GTGCAAAAAGACAGGAG------CGGGGGCAGGAGCTTCCCTTAGAGACCCTGTCTATGCTCACACCCCTCCTCTTCATTTACCCTGAGG-TCCCCAGGTACTCCTCCTCC-TCCACGTGGAAAATTCTG-GTGACGGGGGCGAGGGAAG--GGGCAGGAGTG---- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60145490 168 + 64156825 I a score=5201.000000 s hg38.chr19_GL949748v2_alt 195352 7 + 1064304 GGAGAAC s panTro4.chr19 59127133 7 + 63644993 GGAGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005726 6 + 60714840 GGAGAA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787388 7 - 106955855 TGAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145658 7 + 64156825 GGAGAAC i rheMac3.chr19 I 168 N 0 s macFas5.chr19 55118216 7 + 59248254 GGAGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47222182 5 + 51301725 GGTGC-- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46891654 7 + 50890351 GGAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543095 7 + 49145316 GGAGGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715889 4 + 145441459 GGAG--- i mm10.chr7 I 3 C 0 s canFam3.chr1 19704206 6 - 122678785 GGAGGG- i canFam3.chr1 C 0 C 0 a score=72043.000000 s hg38.chr19_GL949748v2_alt 195359 30 + 1064304 CCCTGTTGGCCTCCTCCCCTCTG--AGGGCTG s panTro4.chr19 59127140 30 + 63644993 CCCTGTTGGCCTCCTCCCCTCTG--AGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005732 29 + 60714840 CCCTGTTGGCC-CCTCCCCTCTG--AGGGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787395 30 - 106955855 CCCTGTTGGCCTCCTCCCCTCTG--CGGGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3686762 30 - 64156825 CCCCGTTGTCCTCCTCCCCTCTG--AGGGCTG i rheMac3.chr19 N 0 I 28 s macFas5.chr19 55118223 30 + 59248254 CTCTGTTGGCCTCCTCCCCTCTG--AGGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47222187 30 + 51301725 CCCCACTGTCCTCCTCCCCTCTG--AGGGGTG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46891661 29 + 50890351 CCCTGTTGGCCT-CTCCCCTCTG--AGGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543102 29 + 49145316 -CCCATTGTCCTCCTTCCCTCTG--AGGCCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715893 31 + 145441459 CACTGCTAGCATTAATTCCTCTGCCAGGGAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 19704212 14 - 122678785 ----------------CAGTGTG--AAGGGTG i canFam3.chr1 C 0 C 0 a score=53986.000000 s hg38.chr19_GL949748v2_alt 195389 27 + 1064304 GGTGCCCTCTGGCTAAGCCTCCC-TCAC s panTro4.chr19 59127170 27 + 63644993 GGTGCCCTCTGGCTAAGCCTCTC-TCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005761 27 + 60714840 GGTCCCATCTGGCTAAGCCTCCC-TCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787425 27 - 106955855 GGTCCCCTCTGGCTAAGCCTCCC-TCAC i nomLeu3.chr10 C 0 I 761 s macFas5.chr19 55118253 27 + 59248254 CGTCCCCTCTGGCTAAGCCTCCC-TCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47222218 28 + 51301725 GTCCCCCTCTGGCTGAGCCTCCCATCAC i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46891690 27 + 50890351 CGTCCCCTCTGGCTAAGCCTCCC-TCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543131 26 + 49145316 AGGCCGCTCTGGCTGAGCCTCCT-TCA- i calJac3.chr22 C 0 C 0 s mm10.chr7 3715924 27 + 145441459 ACTGTCTTCTGACAAAGCCATCT-TCCT i mm10.chr7 C 0 I 2 s canFam3.chr1 19704226 11 - 122678785 ----------------GACTCCC-TCAG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 3686792 28 - 64156825 I a score=-2079.000000 s hg38.chr19_GL949748v2_alt 195416 12 + 1064304 AGCCTCC---CTCGG s papAnu2.chr19 47222246 11 + 51301725 -GAcccc---cccAA i papAnu2.chr19 C 0 I 7 s calJac3.chr22 45543157 12 + 49145316 -GACCCCGCTCCC-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3715953 12 + 145441459 TGTCTCC---TTAAT i mm10.chr7 I 2 C 0 s canFam3.chr1 19704237 11 - 122678785 AGCCCCT---CTCT- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56005788 0 + 60714840 C e nomLeu3.chr10 102787452 761 - 106955855 I e chlSab2.chr6 46891717 0 + 50890351 C e macFas5.chr19 55118280 0 + 59248254 C e rheMac3.chr19 3686792 28 - 64156825 I e panTro4.chr19 59127197 0 + 63644993 C a score=634668.000000 s hg38.chr19_GL949748v2_alt 195428 202 + 1064304 TCCATCCCAGCC--GAGAGCTCTCCTGGGGGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACGGGGTCA-GCGCCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTGGGGGTTGGAGCTGTATGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAAT s panTro4.chr19 59127197 199 + 63644993 TCCATCCCAGCT--GAGA--TCTCCT-GGGGCCTGGGCTTGAGCTGAG----CCTTTGAGCTCAGAGAGGACCGGGTCA-GGGCAGTCACCTGAGACCATGAGTTCCAGGGGGTCACTGGGGAAAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGTGTGGGCTGAGATCACAGGACTCACGGGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005788 200 + 60714840 TCCATCCCAGCC--GAGAGCTCTGCT-CGGGGCAGGGCCAGAGCTGAG-----GTTTGAGCTCAGAGAGGACAGGGTCG-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGAAAGACAGCAGGTGGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGACATCACAGGACTCATGGGGAAT i ponAbe2.chr19 C 0 N 0 s nomLeu3.chr10 102788213 199 - 106955855 TCCGTCTCAGCT--GAGA--TCTCCT-GGGGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACAGGGTCG-GGGCTGTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGAGAGACAGCAGGTGGGGGTTGGAGCGGAGTGAGCTGTAGCACCTGTACGTCCCTGTGTGAGCTGAGGTTACAGGACTCATGTGGAAT i nomLeu3.chr10 I 761 C 0 s rheMac3.chr19 3686820 201 - 64156825 TCCGTCCCTGCCCAGAGC--TCTCCT-GGCGGCAGGGCCTGAGCTGAG----CCATTGAGCTCAGAGGGGACAGGGTCG-GGAGCCTCACCTAAGACAGTGAGCTCCACGGGGTCACTGGGGCGTGACAGCAGGTAGTGGGAGAAGCTGCGTGAGCTGATGCACCTGTAGGTCCCCCCATGCACTGAGGTCACAGGACCCATGGGGAAT i rheMac3.chr19 I 28 C 0 s macFas5.chr19 55118280 199 + 59248254 TCCATCCCAGCT--GAGA--TCTCCG-GGGGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGGGGACAGGATCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGAGTGAGCTGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGGAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47222264 201 + 51301725 TCCATCCCAGCCCAGAGC--TCTCCT-GGGGGCAGGGTCCGAGCTGAG----CCTTTGAGCTCAGACAGAACAGGGTCA-GGGTCCTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTTGACAGCAGGTAGGGGTAGGACCTGACTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACCCATGGGGAAT i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 46891717 198 + 50890351 TCCCTCCCAGCT--GAGA--TCT-CT-GGGGGCCGGGCCGGAGCTGAG----CCTTTGAGCTCAGAGGGGACAGGATCA-GGGCCCTCACCTGAGACCATGAGCTCCAGGGGGTCACTGGGGAGAGACAGCAGGTGGGGGCTGTAGCTGTGTGAGCCGTAGCACCTGTAGGTCCCTGTGTGGACTGAGGTCACAGGACCCATGGGGAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543169 201 + 49145316 TCCATCCCAGCCCAGAGC--TCTCCT-GGGGGCAGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACATGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCATAGCACCTGTAGGTTCCTGCGTGGGCTGAGGTCACAGGACTCATGGGGAAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3715965 187 + 145441459 CCCAACCCAGTAAACAGC--TCTGCT-ACAGTATGGAAGTGA------------TTCATGCT--GAGAAGTCAGGATCA-----CCTCACCTGAGACTGTGAGCTCCACAGGGGCACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGAGCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAAT i mm10.chr7 C 0 C 0 s canFam3.chr1 19704248 202 - 122678785 TCCATCCCAGCCCCGTGC--TCTTGT-GGGCACAGGGCC----CTGAGGACAATGTGGCATATGAAGGAGACAGGGTCAGGGGCCCTCACCTGAGACCAGGATCTTCACGGGGACACTTGGGTGTGATAACAGGTAGGGGGAGGTGTTGAATGAGCCATAGCACCTGTAGGTGCCCCTGTGGGCTGAGGTCACAGGACTCATGGAAAAT i canFam3.chr1 C 0 C 0 a score=8595.000000 s hg38.chr19_GL949748v2_alt 195630 2 + 1064304 TC s panTro4.chr19 59127396 2 + 63644993 TC i panTro4.chr19 C 0 N 0 s nomLeu3.chr10 102788412 2 - 106955855 TC i nomLeu3.chr10 C 0 N 0 s rheMac3.chr19 3687021 2 - 64156825 TC i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55118479 2 + 59248254 TC i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47222465 2 + 51301725 TC i papAnu2.chr19 C 0 N 0 s chlSab2.chr6 46891915 2 + 50890351 TC i chlSab2.chr6 C 0 N 0 s calJac3.chr22 45543370 2 + 49145316 TC i calJac3.chr22 C 0 N 0 s mm10.chr7 3716152 2 + 145441459 TC i mm10.chr7 C 0 N 0 s canFam3.chr1 19704450 2 - 122678785 TC i canFam3.chr1 C 0 N 0 a score=142464.000000 s hg38.chr19_GL949748v2_alt 720632 174 + 1064304 AGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGATTTGTTATTATAGGttatttagtttgcttttttttttt------------cttgagacagactcttcctctgtcacccaagctggagttcagtggcttgagctcagctcactgcaacctccgcctcccaggttcaagctattctgatgcc s panTro4.chr19 59656366 184 + 63644993 agaaccccttaaaatttggtaacctcagtcctctgatttgttattATAGGTTATTTAGtttgcttttttttttttt--ttttttttcttgagacacactcttcctctgtcacccaagctggagttcagtggctcgagctcagctcaatgcaacctccgcctcccaggttcaagcagttctcgtgcc i panTro4.chr19 N 0 C 0 s ponAbe2.chr19 56590788 178 + 60714840 agaaccccttaaaatttggtaacctgagtcctctgatttgttattATAGGTTATTTAGtttgcttttttttttt--------ttttcttgagacagactcttcctctgtcacccaagctggagttcagttgctcgagctcagctcactgcaacctccgcctcccaggttcaagccattctcgtgcc i ponAbe2.chr19 N 0 C 0 s papAnu2.chr19 47707790 179 + 51301725 AGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGATTTGTTATTATAGgttatttagtttgcttttttttttttt-------ttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcctcccaggttcaagcaattctcgtgcc i papAnu2.chr19 N 0 T 15251 s chlSab2.chr6 47404993 185 + 50890351 AGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-TTTGTTGTTATAGGTTATTTAGTttccttttttttttttttttttcctttcttgagacagactcttcctctgtcacccaagttggatttcagtggtacgagctcagctcactgcaacctccacctcccagattcaagcacttctcgtgcc i chlSab2.chr6 N 0 T 15997 a score=23904.000000 s hg38.chr19_GL949748v2_alt 720806 48 + 1064304 tcTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTCTT s panTro4.chr19 59656550 48 + 63644993 tcTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590966 48 + 60714840 tcTGGTTTAGTACTAGAAACTCAAACAGGAAAATTAGAATGGCTTTTT i ponAbe2.chr19 C 0 I 39401 s chlSab2.chr6 47389181 48 + 50890351 TCTGGTTTAGTACTAGAAATTCAAGAAGGAAGATTAGACTGACTTTTT i chlSab2.chr6 T 15997 C 0 e papAnu2.chr19 47707969 15251 + 51301725 T a score=22402.000000 s hg38.chr19_GL949748v2_alt 720854 49 + 1064304 GTCACAATTACTCTGATAATGTTAATAATACCTGTTAGACATTTTGCAC s panTro4.chr19 59656598 49 + 63644993 GTCACAATTACTCTGATAATGTTAATAATACCTCTTAGATATTTTGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630415 49 + 60714840 GTCACAATGACTCTGAAAACCTTAATAATACCTATTAGATATTTTGCAT i ponAbe2.chr19 I 39401 C 0 s chlSab2.chr6 47389229 49 + 50890351 GTCGCAATTACTCTGATAATGTTAATAGTATCTGTTAGATATTTTGCAC i chlSab2.chr6 C 0 C 0 e papAnu2.chr19 47707969 15251 + 51301725 T a score=4682.000000 s hg38.chr19_GL949748v2_alt 720903 7 + 1064304 ATTACAT s panTro4.chr19 59656647 7 + 63644993 ATTACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630464 7 + 60714840 ATTACAC i ponAbe2.chr19 C 0 T 55491 s papAnu2.chr19 47692718 7 + 51301725 atagCAC i papAnu2.chr19 T 15251 C 0 s chlSab2.chr6 47389278 7 + 50890351 ATTACAC i chlSab2.chr6 C 0 T 15871 a score=640723.000000 s hg38.chr19_GL949748v2_alt 720910 375 + 1064304 ATGAAGAAGAGTTTGAATCTCAGATAAA---AACAAAAATACATCAAAAATCTTTAATGTAAGCACAGAATTCAATCATCTCGTGTATGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGGTCGTAGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACAGCACCATGTCGCTCATGGTCGTCAGCATGGC s panTro4.chr19 59656654 375 + 63644993 ATGAAGAAGAGTTTGAATCTCAGATAAA---AACAAAAATTCATCAAAAGTCTTTAATGAAAGCACAGAATTCAATCATCTCGTGTGTGAGAGTTTGGATCTGAGACGTCTTTTGAGTCTGGTCATAGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAAAAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56574980 371 + 60714840 ATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGATATTGGATCTGAGACGTGTTTTGAGT-TGGTAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCA-GAAGCCATATTCCGCTCTTGACCAAACAGCCACTGGGCCTCATGCAAGGTAGAAATAGCCTGCATACGTCATCCTCCCATGATGTGGTCAGCATGGAAACTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACAGGCAGCACCATGTCACTCATGGTCGTCAGCATGGC i ponAbe2.chr19 T 55491 C 0 s rheMac3.chr19 60521516 372 + 64156825 ATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGT-TGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACTGGGCCTCATGCAAGGCAAAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGC i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55621134 372 + 59248254 ATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGT-TGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACTGGGCCTCATGCAAGGCAGAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGC i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47692725 372 + 51301725 ATGGAGAAGAGTTTGaatctcagaagaaaacaacaaaaatacgtCAAAAGTCTTTCATGTCAGCACAAAATTCAATCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGT-TGGTAATAGTGAAGGATGCAAGGTGCCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACACCCACTGGGCCTCATGCAAGGCAGAAAGAGCCTGCGTACGTCATCCTCTCATGATGTGGTCAGCATGTAAACTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373414 372 + 50890351 ATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAATCCTCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGT-TGGTAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACACCCACTGGGCCTCGTGCAAGGCAGAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGC i chlSab2.chr6 T 15871 C 0 a score=111390.000000 s hg38.chr19_GL949748v2_alt 721285 53 + 1064304 GTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGATGGAGA s panTro4.chr19 59657029 53 + 63644993 GTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGATGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575351 53 + 60714840 GTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCGCTGGGGTGGAGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521888 53 + 64156825 ATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGGGTGGATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621506 53 + 59248254 ATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGGGTGGATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693097 53 + 51301725 GTGTGTTGGTGAGTCTCGGAAGGGAATCGAGGGAGGGAGCACTGGggtggaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373786 53 + 50890351 GTGTGTTGGTGAGTCCCGGAAGGGAATCGAGGGAGGGAGCACTGGGGtggata i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769230 50 + 49145316 GTGTCTGGGTGAGTCCTGGAAGGGAA---AGGAGGGCAGGGTTGGGATGGAAA i calJac3.chr22 N 0 I 747 a score=4011.000000 s hg38.chr19_GL949748v2_alt 721338 2 + 1064304 TC s panTro4.chr19 59657082 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575404 2 + 60714840 TC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521941 2 + 64156825 TC i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55621559 2 + 59248254 TC i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47693150 2 + 51301725 tc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47373839 2 + 50890351 tc i chlSab2.chr6 C 0 I 1 e calJac3.chr22 45769280 747 + 49145316 I a score=-32.000000 s hg38.chr19_GL949748v2_alt 721340 2 + 1064304 GG s panTro4.chr19 59657084 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575406 2 + 60714840 TG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521944 1 + 64156825 -G i rheMac3.chr19 I 1 C 0 s papAnu2.chr19 47693153 1 + 51301725 -g i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47373842 1 + 50890351 -g i chlSab2.chr6 I 1 C 0 e calJac3.chr22 45769280 747 + 49145316 I e macFas5.chr19 55621561 2 + 59248254 I a score=109035.000000 s hg38.chr19_GL949748v2_alt 721342 103 + 1064304 GGCCCAGAGTTGGAGATATAGGCCTGGAAGTGGAGTTATGGGCCTAGAGATGGAGTGATGGGCCTAGAAGTGGAGATC-----TGGGC-CTGGAGTGGAGATATGGGCC s panTro4.chr19 59657086 100 + 63644993 GGCCTAGAGGTAAAGATCTGGGCCTGG-AGTGGAGATATGGGTCT-GATGTGGAGATATGGGCCT-GGAGTGGAGATA-----TGGGC-CTGGAGTGGAGATCTGGGCC i panTro4.chr19 C 0 T 14286 s ponAbe2.chr19 56575408 105 + 60714840 GGCCTCGAG-TGGAGATATGGGCCTGG-AGTGGAGATATAGGCCT-GGAGTGGAGATATAGGCCT-GGAGTGGAGATCACTCTTGGTCACGGGGGTGGAGATATGAGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521945 100 + 64156825 GGCCTGGAGGTAAAGATATGGGCCTGA-GGTGGAGATACGAGCCT-GGAGTGGAGATATGGGCCT-GGAGTGGAGATA-----TAGGC-CTGGAGTGGAGATATGGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621563 100 + 59248254 GGCCTGGAGGTAAAGATATGGGCCTGA-GGTGGAGATACGAGCCT-GGAGTGGAGATATGGGCCT-GGAGTGGAGATA-----TGGGC-CTGGAGTGGAGATATGGGCC i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47693154 87 + 51301725 ggcctggaggtAAAGATATGGGCCTGA-GGTGGAGATAtgagcct-ggagtggagatataGGCCT-GGAGTGGAGACA-----TGGGC-CTGGAGC------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373843 67 + 50890351 ggcctggaggtaaaggtataggcctga-g--------------------gtggagatataggcct-ggAGTGGAGATA-----TGGGC-CTGGGG-------------- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I a score=603.000000 s hg38.chr19_GL949748v2_alt 721445 4 + 1064304 TGGA s panTro4.chr19 59642900 4 + 63644993 TGGA i panTro4.chr19 T 14286 C 0 s ponAbe2.chr19 56575513 4 + 60714840 TGGA i ponAbe2.chr19 C 0 I 20 s rheMac3.chr19 60522045 3 + 64156825 TGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621663 3 + 59248254 TGG- i macFas5.chr19 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e chlSab2.chr6 47373910 0 + 50890351 C e papAnu2.chr19 47693241 0 + 51301725 C a score=3838.000000 s hg38.chr19_GL949748v2_alt 721449 20 + 1064304 GGTTGAGATATGGGCC-------------------------------------------------------------------------------------------------TGCA s panTro4.chr19 59642904 116 + 63644993 -GTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTAGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTAGAGATATGGGCCTGGAGTGGAGATATTGGCTTGGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60522048 20 + 64156825 GGTGGAGATATGAGCC-------------------------------------------------------------------------------------------------TGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621666 20 + 59248254 GGTGGAGATATGAGCC-------------------------------------------------------------------------------------------------TGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693241 18 + 51301725 --TTTAGATATGGGCC-------------------------------------------------------------------------------------------------TGGa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373910 18 + 50890351 --TGGAGATATGAGCC-------------------------------------------------------------------------------------------------TGGA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56575517 20 + 60714840 I e calJac3.chr22 45769280 747 + 49145316 I a score=215938.000000 s hg38.chr19_GL949748v2_alt 721469 179 + 1064304 GTAGAGATATGGGCTTGTA--GTGGAGACA-TGGGCCTGGAG---------------------------------------ATGGAGATATGGGCCTGGAGATGGAGATATGGGCCTGCAGTAGAGATATGGGCCTGGAGTGG--------------------AGATATGGGCCTGGAGTGGAGATA-TGGATCTGGAGGTGGAGATACGGGCCTGCAG-TAGAGATATGGGCCTGGAGTGGA s panTro4.chr19 59643020 199 + 63644993 GTGCAGATATGGGCCTGGA--ATGGAGACA-TGGGCCTGGAG---------------------------------------GTGGAGATACAGGCCTGGAGGTGGAGATATGGGCCTGCAGTGTAGATATGGGCCTGGAGTAGAGATATGGGCCTGGAACTATAGATATGGGCCTGGAGTGGAGATATTGGGCCTGGA-GTGGAGATATGGGCCTGGAG-TGGAGATGTTGGCTTGGAGTGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575537 240 + 60714840 GTAGAGATATGGGCCTGCACCCCCGAGATAGTGGGCCTGGAACTGTAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGAGATATGGGCCTGGAG-TGGATATATGGGCCTGGACTGTAGATATGGGCCTGGAGTGGAGATATGAGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATA-TGGGCCTGGAGGTGGAGATTTGGGCCTGGAG-TGGAGATATGGGCCTGGAGTGGA i ponAbe2.chr19 I 20 C 0 s rheMac3.chr19 60522068 179 + 64156825 GTGGAGACATGGGCCTGGAG-CTTTAGATA-TGGGCCTGGA----------------------------------------ATGGAGATATGGGCCTGGAGATAGAGATATGGGCCTGGAGTGGAGATACTGGCTTGGAATGC--------------------AAGTATGGGCCTGGAATGAAGATA-CGGGCCTGGAGGTGGAGATATGGGCCTAGAG-TGTAGATAGGGGCCTGGAACTGT i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55621686 179 + 59248254 GTGGAGACATGGGCCTGGAG-CTTTAGATA-TGGGCCTGGA----------------------------------------ATGGAGATATGGGCCTGGAGATAGAGATATGGGCCTGGAGTGGAGATACTGGTTTGGAATGC--------------------AAGTATGGGCCTGGAATGAAGATA-CAGGCCTGGAGGTGGAGATATGAGCCTGGAG-TGAAGATATGAGCCTAGAACTGT i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47693259 160 + 51301725 atggagatatgggcctggag-------------------------------------------------------------atagagatatgggcctggaggtggagatgtgggcctggagtggagatattGGTTTGGAGTGA--------------------AAATATGGGCCTGGAATGGAGATA-CAGGCCTAGAACTGTAGATATGGGCCTGGAG-TGAAGATATGAGCCTGGAACTGT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47373928 180 + 50890351 GTGGAGACATGGGCCTGGAG-CTTTAGATA-TGGGCCTGGA----------------------------------------ATGGAGATATGGGCCTGGAGATAGAGATATGGGCCTGGAGTGGAGATATTGTCTTGGAGTGC--------------------AAATATGTACCTGGAATGGAGATA-CGGGCCTGGAGGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I a score=53480.000000 s hg38.chr19_GL949748v2_alt 721648 54 + 1064304 GATATGGGCCAGGAG-TGGAGTTATGGGCCTAGAGGTGGATATCTGGGCCTGGA-G s panTro4.chr19 59643219 55 + 63644993 GATATGGGCCTGGAA-AGGAGACATGGGCCTGGAGGTGGAGATACAGGCCTGGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575777 54 + 60714840 GATACGGGCCTGGAG-TGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGA-G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621866 54 + 59248254 GATATGGGCCTGGAG-TGAAGATATGAGCCTAGAACTGTAGATATGGGCCTGGA-G i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47693420 53 + 51301725 Gatatgggcctggag-tggagatatgggtctggag-tggagatatgggcctgga-g i papAnu2.chr19 I 1 I 6 s chlSab2.chr6 47374108 55 + 50890351 GATATGGGCCTGGAACTGTAGATATGGGCCTGGAGGTGGAGATATGGGCCTAGA-G i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e rheMac3.chr19 60522247 1 + 64156825 I a score=9343.000000 s hg38.chr19_GL949748v2_alt 721702 20 + 1064304 TGGAGATATGGGCCTAGGAA- s panTro4.chr19 59643274 20 + 63644993 TGGAGATATGGGCCTAGAGT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575831 19 + 60714840 TGGAGATATGGGCCTGGAA-- i ponAbe2.chr19 C 0 I 55296 s macFas5.chr19 55621920 20 + 59248254 TGGAGATATGGGTCTGGAG-T i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47374163 21 + 50890351 TATAGATATGGGCCTGGAACT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I e rheMac3.chr19 60522247 1 + 64156825 I a score=23361.000000 s hg38.chr19_GL949748v2_alt 721722 38 + 1064304 GGAGATATGGGCCTGGGTGTGGAGATATGGGACTGGAG s panTro4.chr19 59643294 38 + 63644993 GGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631146 38 + 60714840 GGAGATATGGGTCTGGCTGGGGAGATAtgggactggag i ponAbe2.chr19 I 55296 C 0 s macFas5.chr19 55621940 37 + 59248254 GGAGATACTGGCTTGGA-ATGCAAATATGGGCCTGGAA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47374184 37 + 50890351 GTAGATATGGGTCTGGA-GTGGAGATATGGGCCTGGAG i chlSab2.chr6 C 0 I 15895 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I e rheMac3.chr19 60522247 1 + 64156825 I a score=-83.000000 s hg38.chr19_GL949748v2_alt 721760 4 + 1064304 AGGT s panTro4.chr19 59643332 4 + 63644993 CTGT i panTro4.chr19 C 0 I 175 s ponAbe2.chr19 56631184 4 + 60714840 tgga i ponAbe2.chr19 C 0 T 55333 s macFas5.chr19 55621977 4 + 59248254 TGGA i macFas5.chr19 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e chlSab2.chr6 47374221 15895 + 50890351 I e papAnu2.chr19 47693473 6 + 51301725 I e rheMac3.chr19 60522247 1 + 64156825 I a score=12448.000000 s hg38.chr19_GL949748v2_alt 721764 14 + 1064304 GATATGGGCCTGGA s panTro4.chr19 59643511 14 + 63644993 GATATAGGCCTGGA i panTro4.chr19 I 175 C 0 s ponAbe2.chr19 56575855 14 + 60714840 GATATGGGCCTGGA i ponAbe2.chr19 T 55333 C 0 s rheMac3.chr19 60522248 14 + 64156825 GATATGGGCCTGGA i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55621981 14 + 59248254 GATACGGGCCTGGA i macFas5.chr19 C 0 I 1 e calJac3.chr22 45769280 747 + 49145316 I e chlSab2.chr6 47374221 15895 + 50890351 I e papAnu2.chr19 47693473 6 + 51301725 I a score=33322.000000 s hg38.chr19_GL949748v2_alt 721778 37 + 1064304 GTGGAGATATGGGCTTAGG-GTGGAGATCTGGGCC-TGG s panTro4.chr19 59643525 37 + 63644993 GTGGAGATATGGGCCTGGA-GTAGAGATATAGGCC-GGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575869 38 + 60714840 GTGGAGATATAGGCCTGGA-GTGTAGATATGGGCCTGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60522262 37 + 64156825 GTGGAGATATGGGTCTGGA-GTGGAGATATGGGCC-TGG i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55621996 37 + 59248254 GTGGAGATATGGGCCTAGA-GTGTAGATAGGGGCC-TGG i macFas5.chr19 I 1 I 1 s chlSab2.chr6 47390116 36 + 50890351 gtggagatatgggcctagaggtggaggtatgggtc-t-- i chlSab2.chr6 I 15895 C 0 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I a score=36975.000000 s hg38.chr19_GL949748v2_alt 721815 72 + 1064304 GGCAGAGATATGGGACTGGATTGGAGATATGGGCCTAG-GGTGGAAATATCAGCCTGGAGTGGAGATATGGGC s panTro4.chr19 59643562 73 + 63644993 GGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATATGGGC i panTro4.chr19 C 0 I 13595 s ponAbe2.chr19 56575907 73 + 60714840 GGTAGACATATGGGCCTGGAGTGGAACTATGAGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATATGGGC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622034 73 + 59248254 ACTGTAGATATGGGCCTGGAGTGAAGATATGAGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGT i macFas5.chr19 I 1 C 0 s chlSab2.chr6 47390152 37 + 50890351 ------------------------------------agaggtggaggtatggGCCTGGAGTGGAGATATAGGC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I e rheMac3.chr19 60522299 10 + 64156825 I a score=1491.000000 s hg38.chr19_GL949748v2_alt 721887 5 + 1064304 TTGTG s ponAbe2.chr19 56575980 5 + 60714840 CTGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622107 5 + 59248254 CTGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47390189 5 + 50890351 CTGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I e rheMac3.chr19 60522299 10 + 64156825 I e panTro4.chr19 59643635 13595 + 63644993 I a score=14502.000000 s hg38.chr19_GL949748v2_alt 721892 19 + 1064304 GTGGGGATCTGGGCCTGGA s panTro4.chr19 59657230 19 + 63644993 GTGTTGATCTGGGCCTGGA i panTro4.chr19 I 13595 C 0 s ponAbe2.chr19 56575985 19 + 60714840 GTGGAGGTATGGGCCTGGA i ponAbe2.chr19 C 0 I 55331 s macFas5.chr19 55622112 19 + 59248254 GTGGAGATATGGGCCTGGA i macFas5.chr19 C 0 I 7 s chlSab2.chr6 47390194 19 + 50890351 GTGGAGATATGGGCCTGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I e rheMac3.chr19 60522299 10 + 64156825 I a score=61747.000000 s hg38.chr19_GL949748v2_alt 721911 138 + 1064304 AACTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTAACTTCAGCCCAGGAAGGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGTCCTGGTTTGCC s panTro4.chr19 59657249 138 + 63644993 GCCTGGGTCTCTCCACAGCCGAGAGCCCTGTTCTTGGCAGCAGGTAGGCAGGGAGGCTAAGTTTACCTTCAGCCAATCAGGGGCCTGGCTACCAAGACTCACAGCCCAGTCGGGGCAGCAAGGGAGGCCTGGTTTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631335 138 + 60714840 ggctgggTCTCTGCACAGCCAACAGCCGTGTTCTTCGGTGCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGCTGCCAAGACTCACAGCCCAGTGGGAGCAGCAAGGGAGGCCTGATTTGCC i ponAbe2.chr19 I 55331 C 0 s chlSab2.chr6 47390213 138 + 50890351 GGCTGGGTCTCTGCACAGCTGAGAGCCCTGTTCTTGGGGACAGGTAGGCAGTGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGCTTAGTTTTCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 747 + 49145316 I e papAnu2.chr19 47693473 6 + 51301725 I e macFas5.chr19 55622131 7 + 59248254 I e rheMac3.chr19 60522299 10 + 64156825 I a score=1808.000000 s hg38.chr19_GL949748v2_alt 722049 2 + 1064304 TG s panTro4.chr19 59657387 2 + 63644993 TG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631473 2 + 60714840 TG i ponAbe2.chr19 C 0 T 55462 s macFas5.chr19 55622138 2 + 59248254 TA i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47693479 2 + 51301725 TA i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47390351 2 + 50890351 TG i chlSab2.chr6 C 0 T 16124 e calJac3.chr22 45769280 747 + 49145316 I e rheMac3.chr19 60522299 10 + 64156825 I a score=241797.000000 s hg38.chr19_GL949748v2_alt 722051 136 + 1064304 CAGATGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTCGGTTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGG s panTro4.chr19 59657389 136 + 63644993 CAGGTGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACACATGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576013 136 + 60714840 CAGATGGATCACCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCAGGCCACATGTGTGTGAGTCCTTCCTCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCCTGAAATGGGAGG i ponAbe2.chr19 T 55462 I 55459 s rheMac3.chr19 60522309 136 + 64156825 CAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACATGAGG i rheMac3.chr19 I 10 I 248 s macFas5.chr19 55622140 136 + 59248254 CAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACATGAGG i macFas5.chr19 C 0 I 38 s papAnu2.chr19 47693481 136 + 51301725 CAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCCCCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACACGAGG i papAnu2.chr19 C 0 I 38 s chlSab2.chr6 47374229 136 + 50890351 CAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCCACAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACACGAGG i chlSab2.chr6 T 16124 I 16124 e calJac3.chr22 45769280 747 + 49145316 I a score=144523.000000 s hg38.chr19_GL949748v2_alt 722187 185 + 1064304 GAAGTCCTGTCAGGGAGTCTCTCATAAACTGGGAAGAGAGGACCCTGGGGTGCTCGGCCCACATTTCTGACCTTGCC-TCCCTGGCCTCTCAACCCCTTGGCAGAGTCAAGTTCTGTGGGGACCA-GGG---TTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGA---------------------------------AGTGGTAGGAACAGCAGA-T s panTro4.chr19 59657525 221 + 63644993 GAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGAGGAGACCCTGGGGTGCTCAGCCCACAGTTCCGACCTTGCCCTCCCCAGCCTTCCTTTCCCTGGGCTGAGTCAGGTTCTGTGGGAACCC-GGGAGGGCAGACTGGGGTCCTCCAAGCTGTGCTGTGCGGCGGGGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631608 185 + 60714840 GAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGCCCACAGTTCTGACCTCGCC-TCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTCTGGGGACCA-GGG---TTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGA---------------------------------AGTGGTAGGAACAGCAGA-T i ponAbe2.chr19 I 55459 T 55396 s macFas5.chr19 55622314 210 + 59248254 GAAGCCATGT--GGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCCCTGTTCTTTCTTTCCCTTGGCTGAG------TCTGTGGGGACCCTGGG---GGAGACTGGAGTGCTCAAAGCAGCAGTGTGTGGGGAAGAAGTGGTGTCACCGACAGAGGAAGGGAGGGAAGCAGTG-CAAGAACAGCCAG-- i macFas5.chr19 I 38 C 0 s papAnu2.chr19 47693655 210 + 51301725 GAAGCCATGT--GGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCcctgttctttctttcccttggCTGAG------TCCTTGGGGACCCTGGG---GGAGACTGGAGTGCTCAAAGCAGCGGTGTGCGGGGAAGAAGTGGTGTCACCagcaaaggaagggagggaagcagtG-CAAGAACAGCAGG-- i papAnu2.chr19 I 38 C 0 s chlSab2.chr6 47390489 186 + 50890351 GAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCA-GGG---TGAGACTGGGGTGCTCAAAGCTGGGGTGTGGAGGGGGGAAGTGCT---------------------------------AGGAACAGCAGGA- i chlSab2.chr6 I 16124 T 16062 e calJac3.chr22 45769280 747 + 49145316 I e rheMac3.chr19 60522445 248 + 64156825 I a score=615654.000000 s hg38.chr19_GL949748v2_alt 722372 382 + 1064304 CCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGAT-GGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAA--GAGGTGGGA-AACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCGTTCAGGCATCCGCTGATAT-CCACTCACAAAGGACATGCCCTCCACCTCATGTCTACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTTACTCAGCACTTGCTCAAAGTTCTCAGCTGAGGCTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTCAGCCCTGGGCACCAAGGTGTGATAGTAGCCAT s panTro4.chr19 59657746 381 + 63644993 CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGAC-GGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC-TAA--GAGGTGGGGGAACCCCAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGCTATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCTATT-TGTGTTGTTTTACGCGAGTAATCTTGCACTATTAAAATCTAGTAAGAGTCGCTT-ATTCAGCACCTGCTCAAAGTTCTCAGCTGACACTTTTGTTGCAGGGAGATGCCATGTCTATGCGGGATGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576397 365 + 60714840 CCTCTGAGGACAAGAGCATAACTCACACTCTCCAGCGTTTCCATGACGGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAA--GAGGTGGGGGGACCACAGTCATGACCCTGACATTCCAGATCTTCTAATAGGGGCTCAGTTGTTTATTATGGTTCATGCATTAGCTGAT-----------------CATACCCTCCATCCTGTGTCTACCTTGTGTTCTTTTATGTCAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTCGCTT-CTTCAGCACTTGCTCAAAGTTCTCAGCTGACAC--TTGTTGTAGGGAGACACCATGTCTATGTGGGATGGGTCCTTCCCATAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTT i ponAbe2.chr19 T 55396 C 0 s rheMac3.chr19 60522693 384 + 64156825 CCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGG-AACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTT-ATTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTGTAGGGAGATGCCATGTCTATGCGAGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTT i rheMac3.chr19 I 248 C 0 s macFas5.chr19 55622524 384 + 59248254 CCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGG-AACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTT-ATTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTGTAGGGAGATGCCATGTCTATGCGAGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693865 384 + 51301725 CCTCTGAGGACAAGAGCATAACTCACACCCTCCAGCATTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGG-AACCACAGTCATGACCCTGACATTTCAGATCTTCTAATGAGGGCTCAGTTGTTTATTATGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTactttgtgttgttttatgtGAGTAATCTTGCAGTATTGAAATCTAGTAAGAGTCGCCT-ATTTAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTATAGGGAGACGCCATGTCTATGAGGGATGGGTTCTTCCTGTAGCCCTGGGCACTCAGGTGTGGTAGGAGCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374613 384 + 50890351 CCTCTGAGGACAAGAGCGTAACTCACACCCTCCAGCGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGG-AACCACAGTCATGACCCTGACATTTCAGATCTTCTAATGAGGGCTCAGTTGTTTATTATGGTTCGTGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTGGCTT-ATTTAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTATAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTT i chlSab2.chr6 T 16062 C 0 e calJac3.chr22 45769280 747 + 49145316 I a score=759690.000000 s hg38.chr19_GL949748v2_alt 722754 392 + 1064304 AGAAACGTGGAAAGCGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGTTCCACATCCTCCTCTCT-AAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTGTGGTGCCTCTAGGA---CATGTCATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTTCAGTCTGTACAAGGAAGGTGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCCGCACA-ACAGGGACATACAGATGT--CGGGGTTCACACACACACTCCCCCAGTGGGTGGTCAGCA---CCCAGCAACCCCCTGGTGATCGTGGTCATAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59658127 393 + 63644993 AGAAA-GTGGAAAT--GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCTTCCTGTCT-AAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGTCTGAAGGAGAATATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAGTATTCCGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--CGGGGTTCACACCCACACTTCCTCACTGGGTGGTCGGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576762 395 + 60714840 AGAAACGTGGAAAT-GGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACGTCCTTCTCTCT-AAGGTAGTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTGAAGGAGAACATGTGTCTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACAAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACGGAGTATTCCAGAACAGCTTCCTTATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--TGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGCTTTCTGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60523077 397 + 64156825 AGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCTCCTCTCTAAAGGCTGTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55622908 397 + 59248254 AGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCTCCTCTCTAAAGGCTGTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47694249 397 + 51301725 AGAAATGTGGAAAGTGGGGAGAATCTTCTGagcacagggagggaggggctgctTCACATCCTCCTCTCTAAAGGCTGTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCCGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTACCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCTCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGAACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374997 397 + 50890351 AGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCTCCTCTCTAAAGGCGGTGACTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGTGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGT--CAGGGTTCACACCTGAACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770027 390 + 49145316 AGAACAGTGGGAAG--AAGGAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCCCCTCTCT--AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCACACTGGCCGTTCC---AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 I 747 I 914 a score=1010662.000000 s hg38.chr19_GL949748v2_alt 723146 605 + 1064304 TTGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCATGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGTGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatgtatgttataggggaagggactgaaggggaagatggagctca-------------------------tggggagacagcctggactgtcccactgggctcagtgtaatcacaagggtgcacatgaaaggaggaggaagaggggagtggggattagagcagtccagt----ggaagtcttc--acca----------gctttgaaggtggaggaaggccaagagccatgaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattct--ccagagtctccagaggaaacgaagccctgcagatgccttgattttagcccaggaaaaatagggtccaatttctg-tctccagtactggaaggtgtcagtgtggtctctcctgcttccatgcttctgataattttgtacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTT s panTro4.chr19 59658520 630 + 63644993 TGGGATGCTCCTTGTCCCACCTCCTGAGTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAGGGGGATTGAATGCAGGGAAATGGCTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgttataagggaagggacagaaggggaagatggagctcaggttgttgattagttgaccttgagatggggagatggcctggactgtcccagtgggctcagtgtaatcacaagtgtccacatgaaaggaggaggaagaggggagtggggattagagcagcataat----gggagactca--gtca----------gctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattct--cctgagtctccagagggaacacagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctg-tctccagaattggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGCTCAAGGACAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577157 648 + 60714840 TGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCATCAGGGTCCGATCATCCAGGCCCTGACTgtatttggggtaaagggggattcagtacagagaaataggtgctgtggtgggaagaataattgtccccagtgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaaggtggagctcagtttgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgacaggaggaggaagaggagagtggggattagagcagcgtagtgggagggagactcc--atcagccacagtgggctttgaagatgggggaaggccatgagccacaaaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgaagacgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcgttgtattctctcctgccgccatgtttgtgataattttctccagcagcaacaggaaaccaacacaggaacccaggtgaaggacaagtt i ponAbe2.chr19 C 0 I 55604 s rheMac3.chr19 60523474 638 + 64156825 TGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaaaaataggtactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagggagactcactacag----------gctttgaaggtgaaggaaggccacgaaccatgaaggcaggtgg-ctctaagggctggagaagtcaagggaactgattct-ccctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatgtttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55623305 638 + 59248254 TGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaaaaatagatactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagggagactcactacag----------gctttgaaggtgaaggaaggccacgaaccatgaaggcaggtgg-ctctaagggctggagaagtcaagggaactgattct-ccctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatgtttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47694646 639 + 51301725 TGGGCTTCTCCTTGTCCCAACTCCTGAATCCCCGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTATTTGGGGTAAAGGGGGATTCAGTACAGAAAAATAGGTACTGTGATGGGAAGAAAAATTGTCCCTAGTTATGGCTACATGATAATCCGTGGACCCTATGACTGTTTATGTTATAGGGCAGAGGACTGAAGGGGAAGATGGAGCTCAGGTTGTTGATGAGTtgaccttgagatggggagacGACCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGCACCACatgagaggaggaggatgaggagagtGGGGATTAGAGCAGCATAGTGGGAGGGAGACTCACTACAG----------GCTTTGAAGGTGAAGGAAGGCCACGAGCCATGAAGGCAGGTGGCCTCTAAGGGCTGGAGAAGTCAAGGGAACTGATTCT-CCCTGAGTCTCCAGTGGAAGCACAGCCCTGCAGATGCCTTGGTTTTAGCCCAGAGAGAACTGGGTCAGATTTCTGTTCTCCATAAGTGGAAGGGGTTATTGTATTCTCTCCTGCTACCATGTTTGTGATAATTTtctacagcagcaacaggaaaccaacacaggaacTCAGGTCAAGGACAAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375394 639 + 50890351 TGGGCTTCTCCTTGTCCCATCTCCTGAATCCCAGAGCTTCTGCTGGGGgtatccaccagggtcccatcacccaggacctgactgtatttggggtaaagggggattcagtacagagaaataggtactgtgatgggaagaataattgtccctagttatggctacatggtaatccgtggaccctatgactatttatgttatagggcagaggactaaaggggaagatggagctcaggttgttgataagttgaccttgagatggggagacggcctggactgtcccgctgggctcagtggaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagagcagcacagtgggagggagactcactacag----------gctttgaaggtgaaggaaggccacgagccatgaaggcaggtggcctctaagggctagagaattcaagggaactgattct-ccctgagtctccagtggaagcacagccctgcagattccttgattttagcccagagagaactgggtcagatttctgttctcctttagtggaaggggttattgtattctctcctgccaccgtgtttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaagtcaaggacaagtt i chlSab2.chr6 C 0 I 16037 e calJac3.chr22 45770417 914 + 49145316 I a score=83375.000000 s hg38.chr19_GL949748v2_alt 723751 183 + 1064304 AAGAAACAACCCAAGGAAagccaggcatggtggcaggcgcatgtaatcctagcgactcaggaggctgagggcaggagaatcacttgaacccaggaaacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaaaaTTAATTAATTAA s panTro4.chr19 59659150 183 + 63644993 AAGAAAGGACACAAGGAtagccaggcatggtggcaggtgcatgtaatcctagcgactcgggaggctgagggcaggagaatcagttgaacccaggaggcagacgttgcagtgagcctagaccacaccacttcactccagcctgggcgaaggagtgagactctgtctctaaaaTTAATTAATTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633409 183 + 60714840 AAGAaaggacacaaggatagctgggcatggtggcaggcccatgtaatcctagtggctccggaggctgagggcaggagaaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaaaaTTAATTAATTAA i ponAbe2.chr19 I 55604 C 0 s chlSab2.chr6 47392070 180 + 50890351 AAGAAGTGGCCCAAGGAtagccgggcgtggtcgcaggcacatgtaatcctagtgactcgggaggctga-ggcaggagaatcgcttaaacccaggaggcagaggttgcagtaaaccgagaccacacctcttcactccagcctgggcaaaggagt--gactctgtctccaaaaTTAATTAATTAA i chlSab2.chr6 I 16037 T 16217 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47695285 0 + 51301725 C e macFas5.chr19 55623943 0 + 59248254 C e rheMac3.chr19 60524112 0 + 64156825 C a score=819.000000 s hg38.chr19_GL949748v2_alt 723934 3 + 1064304 TTA s panTro4.chr19 59659333 3 + 63644993 TTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633592 3 + 60714840 TTA i ponAbe2.chr19 C 0 T 55790 e calJac3.chr22 45770417 914 + 49145316 I e chlSab2.chr6 47392250 16217 + 50890351 T e papAnu2.chr19 47695285 0 + 51301725 C e macFas5.chr19 55623943 0 + 59248254 C e rheMac3.chr19 60524112 0 + 64156825 C a score=860478.000000 s hg38.chr19_GL949748v2_alt 723937 536 + 1064304 AagaaaccaaacaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgatactcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCGACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTATTCATCAGTTCATACCTTCTGCCAAGGATTGCAATTCATCCAAAAGAGATTGAACAAGGCTGATAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTTCACCCCCACATAAACAGCAGGAAAGACGTTAGTGTGAAATAGATACAACACCCCAAGAGATGAGGCTAAGCCCAGTGGGAAGGGAATCAGAGGCTACTagagacagagggacagagaagagggagggagacagaTGGAAGGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACA-GACACCAG s panTro4.chr19 59659336 522 + 63644993 Aagaaaccaaacaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgataatcctccaaccagcaccaggagccagcctatggaagctggcac--------------aggcatggcaagagtggctcccagTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGTCTGCTAAGAGCCTGGACATGCAGCCAATCCTGGTTCCTCTTCCACCCCCACATAGA-AGCAGGAAAGACATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAATCAGAGGCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGGAGACAGATGGAAGGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGATAAGACACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577805 527 + 60714840 aagaaaccaaacaaggagaa-gttggctacactgattttagcacgggtgggatactgatgctaccaccaggctcgatccacatagggaggagttgatgctcctggaaccagcaccaggggccaccttatggaagctggggccaTGGAGAATGCACAGACATGACAGGAGAGGCTCCCAATCCCCATCAGGAACGG-------GGACACTGATGCCTGCCTTACTGATGAGTTCATACCTCCTGCCGGCCTTTCCAATCTGTCCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGAACATGCAGCCTGTCGTGGTTCCTCTTCCACCCCCACATAAACACCAGGAAAGAGATTAGTGGGAAAGAGATACAACAGCCTAAGAGATGACGCTAAGCACAGTGGGAAGGGAATCAG-GGCTACTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGCAGGGACCTGCACCAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGAGAGGTAGGAGAGAGATA-GACACCAT i ponAbe2.chr19 T 55790 C 0 s rheMac3.chr19 60524112 527 + 64156825 aagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggttgattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGAACAG-------GGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAG-GGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCA-GGGTTATGGGCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATA-GACACCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55623943 527 + 59248254 aagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggttgattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGAACAG-------GGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAG-GGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCA-GGGTTATGGGCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATA-GACACCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47695285 528 + 51301725 AAGAAACCAAACAAGGAGAAGGTTGGCTACACTGATTTCAGCACAGGTGGAATACTGTTGCTACCACCAGGCTTGATCCACACAGGGAGGGGTTGATTCTCCTGGAACCAGCACCAGGGGCCACCCTATGGCAGCTGGGACCATGGAAAAGGCACAGACTTGGCAGGAGAGGCTCCCAACCCCCATCAGGAACAG-------GGACATTGATGCCTGCCTTACTGATGAGTTCACACCTCCCGCCAGTCATTCCAATTTGTCCAAAAGAGATTGATTCAAGCTGCTGAGAGCCTGGACGTGCAGCCTGTCATGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTgggaagggaatcag-gggtcctagagacagagagacagggaagagggagggagacagatggagggACCTGCACCAGGGGTTATGGGTACAGaaaaaaaCATGGAGACACAGACAGGGAGGAGAGAGATG-GACACCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376033 528 + 50890351 aagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacacagggaggggttgattctcctggaaccagcaccaggggccaccctatggcagctgggaccatggaaaaggcacagacatggcaggagAGGATCCCAACCCCCATCAGGAACAG-------GGACATTGATGCCTGCCTTACTGATGAGTTCACACCTCCCGCCAGCCATTCCAATTTGTCCAAAAGAGATTGAGTCAGGCTGCTGAGAGCCTGGACGTGCAGCCTGTCATGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGAAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAG-GGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGACAGGGAGGAGAGAGATA-GACACCAT i chlSab2.chr6 T 16217 C 0 e calJac3.chr22 45770417 914 + 49145316 I a score=764952.000000 s hg38.chr19_GL949748v2_alt 724473 400 + 1064304 CAAGGGGAAGCCTCACTCATTCTAGGTGCCATGGATGGGATGATAAAGAGAGACACCTTCTAAACTCACAACCTCTCTTCTTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCAGGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAAGTATAAGGACACTTTGCACCTCATTGGAGAGCACCATGATGGGGTCTCCAAGGCCAA------CTTCTCCATCGGTCCCATGATGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTCATCACAGGTGAGAGTGTCCGGAC s panTro4.chr19 59659858 400 + 63644993 CGAGGGGAAGCCTCACTCATTCTAGGTGCCATGGATGGGATGATAAAGAGAGACACCTTCTAAACTCACAATCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGATGTTTAACGACACTTTGCGCCTCATTGGAGAGCACCATGATGGGGTCTCCAAGGCCAA------CTTCCCCATCGGTCGCATGACGCAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTCTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578332 400 + 60714840 GGAGCGGAAGCCTCACTTATTTCAGGTCCCATGAATGGGATGAGAAAGGGAGACACCTTCTGAACTCACAACCTCTCTTCTTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTGCAATGTTGGTCAGATATCAGGTTTGAGCACTTCCTTCTGCACAGAGAGGGGACCACTGAGGACCCCTTGCGCCTCGTTGGAGAGCTCCACGATGCAGGTTCCCAGGTCAA------CTATTCCATGGGTCCCATGACACCTGCCCTTGCAGGGACCTACAGATGCTTTGGTTCTGTCACTCACTTACCCTATGAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524639 400 + 64156825 GGAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTACAGAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCACTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA------CTCTTCCGTGGGTCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55624470 400 + 59248254 GGAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTACAGAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCACTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA------CTCTTCCGTGGGGCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47695813 400 + 51301725 GGAGGGGAAGCCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCATTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA------CTATTCCGTGGGTCCCATGATGCCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGATCCACTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376561 400 + 50890351 GGAGGGGAAGCCTCACTTATTCCAGTTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTGCAATGTTGGTCAGATATGAGGTTTGAGCGTTTCCTTCTGCACAGAGAGGGGATCACTAAGGACCCCTTGCACCTCGTTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA------CTATTCCGTGGGTCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 402 + 49145316 CGAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGAACTTGACACGAGGTTGGAGGCTGGGACTTACTACGTCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGAC i calJac3.chr22 I 914 I 625 a score=1862.000000 s hg38.chr19_GL949748v2_alt 724873 2 + 1064304 AT s panTro4.chr19 59660258 2 + 63644993 AT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578732 2 + 60714840 CT i ponAbe2.chr19 C 0 I 55797 s rheMac3.chr19 60525039 2 + 64156825 CT i rheMac3.chr19 C 0 I 42 s macFas5.chr19 55624870 2 + 59248254 CT i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47696213 2 + 51301725 CT i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47376961 2 + 50890351 CT i chlSab2.chr6 C 0 I 3 e calJac3.chr22 45771733 625 + 49145316 I a score=2616.000000 s hg38.chr19_GL949748v2_alt 724875 5 + 1064304 TCT---CA s panTro4.chr19 59660260 8 + 63644993 TCTTCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634531 8 + 60714840 TCTTCTTA i ponAbe2.chr19 I 55797 C 0 s macFas5.chr19 55624875 5 + 59248254 ---TCTCA i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47696218 5 + 51301725 ---TCTCA i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47376966 5 + 50890351 ---TCTCA i chlSab2.chr6 I 3 I 33 e calJac3.chr22 45771733 625 + 49145316 I e rheMac3.chr19 60525041 42 + 64156825 I a score=17943.000000 s hg38.chr19_GL949748v2_alt 724880 34 + 1064304 TTGTCATTGGGCTGCAGAGTGAATGATCCACGAC s panTro4.chr19 59660268 34 + 63644993 TTTTCATTGGGATGCAGAGTGAATGATCCAGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634539 34 + 60714840 TTGTCATTGGGATGCAGAGTGAATGATCCAGAAC i ponAbe2.chr19 C 0 T 55798 s macFas5.chr19 55624880 34 + 59248254 CCCTTGCAGGGACAGGGAGTGAATGATCTAGCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47696223 34 + 51301725 CCCTTGCAGGGACAGGGAGTGAATGATCTGGGAC i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e chlSab2.chr6 47376971 33 + 50890351 I e rheMac3.chr19 60525041 42 + 64156825 I a score=180.000000 s hg38.chr19_GL949748v2_alt 724914 1 + 1064304 T s panTro4.chr19 59660302 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578775 1 + 60714840 T i ponAbe2.chr19 T 55798 C 0 s macFas5.chr19 55624914 1 + 59248254 C i macFas5.chr19 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e chlSab2.chr6 47376971 33 + 50890351 I e papAnu2.chr19 47696257 0 + 51301725 C e rheMac3.chr19 60525041 42 + 64156825 I a score=1324782.000000 s hg38.chr19_GL949748v2_alt 724915 799 + 1064304 TGGAACCCCCAGGTAGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGCTGAGGTTTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--GGAGgacagacacaggggccatacagggagttag-aaaagacagaaagagtt-aaaggag----acagacagacagacaTGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCACAGACCTGGCACAGGATAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAG--GCCATGTTTATTCTGACACCTCTGCCTTCCATGTAATGGAGA-GTAACCGTCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAAAGGAT-----------------CACTGAGAGGCACAGAGAGAAATCAGGAACACCAAAAAGCAAAGACATAA--ACACACAGAGAATGGGCCAGAGGAAGGAGATTGAGAGACTCACTGACACATAAAGAGAGAGAA-AAGAGGGCAGAGGAGTGGTGAGAATGATGGAAGGGAGCAGAGAAAAGCACTAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGATGAACTGCAGAGATTCC-AAAGAGAACTAGAGAGACCGAGAGGCAGAG s panTro4.chr19 59660303 798 + 63644993 TGGAGGCCC-AGCTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCATACAGGGAGTTAG-AAAAGACAGAAGGAGTT-AAAGGAG----ACAGACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGACACCTGGCACAGGTTAGAAGTTTCATTTGTGTTTTACCTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCCGTGGCCTCAGGCCTTGTGGCACCTACAGATGTCGTGGTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCGTCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGAT-----------------CACTGagagacacagagagaaatcagggacaccaaaaaacaaagacagaa--acacacagagaaagagccagaggaaggagattgagagactcacagacacataaagagagagaa---gagggcagagaagtggagacaatgatggaagagagcagagaAAACcactaaaattagagtcctgagggcgaggcacaagggcatagaaagatggagatgtggggatgaattgcagagattcc-aaagagaactagagaaaccgagaggcagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578776 838 + 60714840 TGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGGTTCCTATGGAGAGAAAGTGACTTGGTGAGGTCTGTACCAACAAAGGCAGAGAAACTGGAGACACAAGTACAGACCACATGTCATAACATAGAAGCCAGACACAGGGGCCACACAGGGTGTTAGAAAAAGAGATAAAGAGGT-AAAGAAGA--CACAGAGAGACAGACATGTCCCAGAAAGAGGTGTCCTTCCATGTTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGATTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACATCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCTGTGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCATCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACAGCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACATGTTATAGGATTGCTGAGAACAAAAGCCCACAGAGAGACACGGACTGAAATCAGGGAAATCAAAAAGCAAAGACATGAACACACACACAGAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACACATAAAGAGATAGAAAAAGAGGGCAGAGAAGTGGAGCATATGATGGAAGGGAGCAAAGAAAAGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAAAGGGAACTAGAGAGACTGAGAGGCAGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525083 838 + 64156825 CGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCGCACATCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGAAAAGAGATAAAGAGGT-AAAGAAGACACACAGAGAGACAGACATGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGACCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACGAAAACAGGGAAAGATAAAGATGTGGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAG i rheMac3.chr19 I 42 I 188 s macFas5.chr19 55624915 837 + 59248254 -GGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCACACATCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGAAAAGAGATAAAGAGGT-AAagaagacacacagagagacagacaTGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACGAAAACAGGGAAAGATAAAGATGTGGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAG i macFas5.chr19 C 0 I 14 s papAnu2.chr19 47696257 839 + 51301725 TGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCACACGTCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGaaaagagataaagaggt-aaagaagacacacagagagacagacatgtcccagagagagaTGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCTTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTTTTCTTaaacctctgccttccatgcAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACACGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACATGGAGTGAAATCAGGGAAATCAAAAAGCgaagacatgaacacacacacagaatgagcCAGAAGAAGGGAATTGAGAGACTCACAGACacataaagagatagaaaaagagggCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGATGGATTGCagagatgccaaaagagaactagagagactgagaggcagag i papAnu2.chr19 C 0 I 14 s chlSab2.chr6 47377004 840 + 50890351 TGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACATAGGTACAGACTGCACGTCATAACATAGAAGGCAGACACAGGGGCCATACAGGGTGTTAGGAAAAGAGATAAAGAGGTAAAAGAAGACGCACAGAGAGACAGACATGTCCCAGAGAGAGATGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCGTGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACACGTGATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAGAATGAGCCACAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-AAGCATATGACGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAAGGAGAGGCACAAAAACAGGGAAAGATAAAGATGTGGGAATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGAGAGGCAGAG i chlSab2.chr6 I 33 I 16185 e calJac3.chr22 45771733 625 + 49145316 I a score=8194.000000 s hg38.chr19_GL949748v2_alt 725714 7 + 1064304 CAagaca s panTro4.chr19 59661101 7 + 63644993 caagaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56579614 7 + 60714840 AAAGACA i ponAbe2.chr19 C 0 I 55760 s macFas5.chr19 55625766 7 + 59248254 aaagaca i macFas5.chr19 I 14 C 0 s papAnu2.chr19 47697110 7 + 51301725 aaagaca i papAnu2.chr19 I 14 C 0 s chlSab2.chr6 47394029 7 + 50890351 aaagaca i chlSab2.chr6 I 16185 C 0 e calJac3.chr22 45771733 625 + 49145316 I e rheMac3.chr19 60525921 188 + 64156825 I a score=31318.000000 s hg38.chr19_GL949748v2_alt 725721 32 + 1064304 gatgata----gatggatagatatagatagatgata s panTro4.chr19 59661108 32 + 63644993 gatgata----gatggatagatatagatagatgata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635381 32 + 60714840 gatgata----gatggatagatatagatagatgata i ponAbe2.chr19 I 55760 C 0 s macFas5.chr19 55625773 32 + 59248254 gatgata----gatagatataaatggatgaaagata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697117 32 + 51301725 gacgata----gatagatataaatggatgaaagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47394036 36 + 50890351 gatgatagatggatagatagatatagagagatgata i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e rheMac3.chr19 60525921 188 + 64156825 I a score=198267.000000 s hg38.chr19_GL949748v2_alt 725753 219 + 1064304 aataggtagatgatagataat--------aggttaaagatacatagatgatgattgattgattc----attaatagataatacatagagatgatgatgatgaagacagatag--------ataatacgtacagatagagaggcagacaga------aatcatagagaga--ga------------gatgatacatacat--ataaata-aca-----gatgattgatggat--------agatagacaactgata-----------gatacatagatgatatatag s panTro4.chr19 59661140 219 + 63644993 aataggtagatgatagataat--------aggttatagatacatagatgatgattgattgattc----attaatagatgatacatagagatgatgatgatgaagacagatag--------ataatacatagagatagagaggcagacaga--gagaaatcatacagaga------------------tgatacatagat--atagata-ata-----gatgattgatggat--------agatagacaattgata-----------gatacatagatgatatatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635413 231 + 60714840 aataggtagatgatagataat--------aggttatagatacatagaagatgattgattgattcattgattaatagatgatacatagagatgatgatgatgaagatagatag--------ataatacatagagatagagaggcagacaaagagagaaatcatagagagagaga------------gatgatacatagat--atagata-ata-----gatgattgatggct--------agatagacaattggta-----------gataaatagatgatatatag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526109 242 + 64156825 aataggtagatggtagataac----agataggttgtaggtacatagatgatgattgatggattgattgatagacagatgatacatagagataatgatgatgaagatagacag--------atgatacatagagatatagaggcagacaga---------gagagagata----------------gatgatacacagat--atagata-acacata-ggtgattgatggatagagagctagatagacaattgatagata---cagagatagatagatgatacataa i rheMac3.chr19 I 188 C 0 s macFas5.chr19 55625805 226 + 59248254 -agagatagatgatagataacagagagataggtgatagataaatagatgat--------gaatgactgatagac-gat-atagatagagaagtagat-----agatagacag--------atgatacataaagagacatagagagacaga---------aagacagaca-cgt------------gatgatagatagatggatagatacatacatacattgattgatagat---------gatagataacagagagagaggtcatagatgcacagatgacg----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697149 232 + 51301725 -agagatagatgatagataacagagagataggtgatagataaatagatgatgagtagacgat--atagatagat-gat-atagatagagaagtagat-----agatagacag--------atgatacataaatagacatagagagacaga---------aagacagaca-cgt------------gatgatagatagatggatagatacatacatacattgattgatagat---------gatagataacagagagagaggtcatagatacacagatgatg----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47394072 249 + 50890351 aatagttaggtgatagataat----agataggttatagatacatagatgatgattgcttgtttcattgattaatagatgatacatagagatgatgatgatcaagatagatagataaatatatgatacatcgagagagagagagaggcaga---------cagagagaga-aatcagagagagagagatggtacattgat--acagata-aca-----ggtgatggatggat--------agatagacaattgatagaga-------gataaatagatgatacatag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I a score=59984.000000 s hg38.chr19_GL949748v2_alt 725972 47 + 1064304 atatagatgacaggtagagaatttgtagataggcaccgaatagataa s panTro4.chr19 59661359 47 + 63644993 atatagatgacaggtagagaatttgtagataggcactgaatagataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635644 47 + 60714840 atatagatgacaggtagagaatttgtagataggcaccgaatagataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 0 47 - 21488 ATatagatgacaggtagagaatttgtagatagacaccaaatagataa i nomLeu3.chr10_GL398297_2_random N 0 C 0 s rheMac3.chr19 60526351 47 + 64156825 atatagatgatagatagataatttgtagatagacaccaaatagataa i rheMac3.chr19 C 0 T 4878 s macFas5.chr19 55626031 27 + 59248254 --atagatgatagatacat------------------acatagataa i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47697381 31 + 51301725 --atagatgatagatacatacat--------------acatagataa i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47394321 43 + 50890351 atatagatgacagataatt----tatagatagaccctgaatagatca i chlSab2.chr6 C 0 T 16215 e calJac3.chr22 45771733 625 + 49145316 I a score=48172.000000 s hg38.chr19_GL949748v2_alt 726019 23 + 1064304 atagatagatcgacagataatag s panTro4.chr19 59661406 23 + 63644993 atatatagatcgatagataatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635691 23 + 60714840 atagatagatcgatagagaatag i ponAbe2.chr19 C 0 T 55755 s nomLeu3.chr10_GL398297_2_random 47 23 - 21488 atagatagcttgatagataatag i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 24 23 + 40826 atagattgatcaatagataatag i rheMac3.chrUn_JH290802 n 4878 C 0 s macFas5.chr19 55626061 23 + 59248254 atagatcgatcaatagataatag i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47697415 23 + 51301725 atagatcgatcaatagataatag i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47378149 23 + 50890351 atagatcgatcaatagataatag i chlSab2.chr6 T 16215 C 0 e calJac3.chr22 45771733 625 + 49145316 I a score=627120.000000 s hg38.chr19_GL949748v2_alt 726042 311 + 1064304 atagaAATATGCAGAAAGTTATGAACAGGACACAACGTGAGAAACTTAGAATTTA--AAAAAGTAACATCAAGTCAACCAATCCAAGGAG---------AGTCAGAGAGAATAAAAGAATCCAAAAAGGGAAAACATATCTAGAGGTGGGGAAGCGAGGTCagagacctagagagacagagaaggtggaaggaggaaatagacatgaagagagatg-gggtggagggtgag----agagagagagagagagCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGATCCTCCCTGAGG s panTro4.chr19 59661429 302 + 63644993 atagaaatatgcagaaagttatgaacaggacacaaagtgagaaactcagaattta--aaaaagtaacatcaagtcaaccaatccaaggag---------AGTCAGAGAGAATAAAACAATCCAAAGAGAGAAAACATATCTAGAGGTGGGGAAGTGAGATCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATG-GG-TGGAGGGTGAG----AGAGAGAG--------CATTAGGTCATAGAGCAGGGGAGTGAGCTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGATCCTCCCTAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56579959 314 + 60714840 atagaAATATGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCCATCCAAGGAG---------GGTCAGAGAGAATAAAATCATACAAAAAAAGAAAACATAGCTAGGGATGGAAAAGTGAGGTCAGAGACCTAGACAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGTGGGTGGAGGGTGAA----AGAGAGAG--AGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 T 55755 C 0 s nomLeu3.chr10_GL398297_2_random 70 310 - 21488 atagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTTA--AAAAAGTAACATCAAATCAACCAATCCAAGGAG---------AGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATATCTAGAGGTTGGGAAGTGAGGTCagagacctagagagacagagaaggtggaaggaggaaatagacatgaagagagatgggggtggagggtgag----agagagac--agagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAG--GTGAAGGCAGCTGTGACAAGGAAGAACCTCCCTGAGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 47 303 + 40826 atagaAATATGCAGAAAGTTATGAATAAGACAGAAAATGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAATCCAAGTAGGGTCAGAAAGGTCAGAAATAATAAAATGGTACAAA-AGAGAAAACATAGATAGGGATGGGGAAGTGAAGTC----------AGAGACAGAGAAGGTGGAAGGAGGAGACAGACATGAAGAGAGATG-GGGTGGAGGGTG------AGAGAGAG--------CATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGTTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55626084 303 + 59248254 atagaAATATGCAGAAAGTTATGAATAAGACAGAAAATGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAATCCAAGTAGGGTCAGAAAGGTCAGAAATAATAAAATGGTACAAA-AGAGAAAACATAGATAGGGATGGGGAAGTGAAGTC----------agagacagagaaggtggaaggaggagacagacatgaagagagacg-gggtggagggtg------agagagag--------CATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGTTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697438 303 + 51301725 atagaaataTGCAGAAAGTTATGaataagacagaaaatgagagactcagaattaaagaaagaggaagatcAAGTCAACCAATCCAAGTAGGGTCAGAAAggtcagaaataataaaatggtacaaa-aaagaaaacatagatagGGATGGGGAAGTGAGGTC----------agagacagagaaggtggaaggaggagacagacatgaagagagacg-gggtggagggtg------agagagag--------cattaggCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378172 310 + 50890351 atagaAATATGCAGAAAGTTATGAATAAGACAGAAAATGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAATCCAAGTAG---------GGTCAGAAATAATAAAATGGTACAAA-AAAGAAAACATAGCTTGCGATGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAACAGACATGAAGAGAGATG-GGGTGGAGGGTGAGAGGCAGAGAGAG--------CATTAGGTCATAGAGCAGGGGAGTGAGCTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I a score=1607210.000000 s hg38.chr19_GL949748v2_alt 726353 646 + 1064304 --AAAATGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTTTGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACGTAGGTTCTCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGAACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAACCCCATATCTGTCTCATGTCCTAT---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGATGC--AGAGAGAAGACGA-AGCTTGGGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACACGGCCTGCATGAAGGCCCGCGGCCAGGGCTCCAGGCACACAGGCAGATGGAGAAAACGGTCAGGAGAGACCCAGA-GGAGAG-AGACTGGGCTCAGTTTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACA-TTATCCA-TTTCCCAGAAGCCCATCCTG s panTro4.chr19 59661731 646 + 63644993 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGATTCTGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGATCCTATGACATGTACCGTCTATCCAGGGAGGGGGAGTCTCATGAACGTAGGCTCCCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACCGATGCTTCGGCTATTTCCGTGACTCTCCGTACGAGTGGTCAAAGTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAGAGCCCATGCCTGTCCCATGTCCTAT---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAAGGATGAACAGATGC--AGAGAGAAGACGA-AGCTTGGGTGTGAGGGAGACATCAGGGCACAGGATGGCAGACAGGGCAGCTCCAAACCCTCCTACACGGACTGCATGGAGGCCTGCGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGTGGTCAGAAGAGACCCAGA-GGAGGG-AGACTGGGCTCAGTTTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCA-TTTCCCAGAAGCCCATCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580273 646 + 60714840 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCTGGCCCCACAGTCCAGGCAGGAGAGAGTGTGACCTTGTCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATCTATCCAGGGAGGAGGGGGGCCATGAACTTAGGCTCCCTGCAGTGCCCAAGGTCAACGGAACATTCCAGGCAGACTTTCTTCTGGGCCCTGCCA------CCCATGGAGGGACCTACAGGTGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAAAGTCGAGTGACCCACTGCTTATTTCTGTCACAGGTGAGGAAAGCCCATGCCTGTCCCATGTCTTAT---------GATCCTAGAGCCTTAGCTGAGGAACTTCCTGCTG--------------------ATGATGGAAA----GAAGGATGAACAGATGC--AGAGAGAAGACGA-AGCCTGGGTGTGAGGCCGGGGTCAGGGCACAGGATGGCAGACACGGCACCTCCAAACCCTCCTGCACGGCCTGCATGGAGGCCCGCGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGAATAGACCCAGA-GGAGGG-AGACTGGGCTCAGTTTGGGGAGATCAGAGGTTTCCTCAGCCCCTCAACC-TTACCCA-TTTCCCAGAAGCCCATCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 380 649 - 21488 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCATGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCAGGAGCTCCTATGACGTGTACCATCTATCCAGAGAGGAGGGGGGCCATGAACGTAGGCTCTCTGCAGTGCTCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CTCACGGAGAGGCCTACAAATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGAAAACACCCTGCTTGTCCCATGTCTTGT---------GATCCTAGAGCCATAACTGAGGAGCTTCCTGCTG--------------------ATGGTGGAGA----GAAGGATGGACAGATGCCGAGAGAGAAGACAA-AGCCTGGGTGTAAGGGCGGGGTCAGGGCACGGGATGGCAGACAGGACACCTCCAAACCCTCCTGTACGGCCTGCATGGATGCCTGCAGTCAGGGTTCCAGGCACCCAGGCAGATGGAGAAAGCAGTCAGGATAGACCCAGA-GAAGGG-AGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACTGTTACCCA-TTTCACAGAAGCCCATCCTG i nomLeu3.chr10_GL398297_2_random C 0 I 15579 s rheMac3.chrUn_JH290802 350 647 + 40826 --AAACTGCCTCTTCTCTTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCACGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCATCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGCAGTGCTGAGGGTCAGTGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------CCCACGGAGGGAACTACAGATGCTTTGGCTCTTTCCGTGCCCTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAACCCCATGCCTGTCCCACGTCTTGT---------AATCCTAGAGCCATAGCTGAGGAACTTCCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGATGC--AGAGAGAAGACAA-AGCCTGGGTGTGAGGGTGGGTTCAGGGCGCAGGATGGCAGACAGGGCACCTCCAAACCCTCCTTCACAGCCCACATGGAGGCCCGCGTTCAGGGCTGTCGGCACCCAGGCAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGTGGGGAGACTGGGCTCAGTTTGGGGAGATCTGAGGTTCCCTCAGCCCCTCAACC-TTACTTA-TTTCCCAGAAGCCCATCCCG i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55626387 647 + 59248254 --AAACTGCCTCTTCTCTTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCGTCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGCAGTGCCGAGGGTCAGTGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------CCCACGGAGGGAACTACAGATGCTTTGGCTCTTTCCGTGCCCTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAACCCCATGCCTGTCCCACGTCTTGT---------AATCCTAGAGCCATAGCTGAGGAACTTCCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGATGC--AGAGAGAAGACAA-AGCCTGGGTGTGAGGGTGGGTTCAGGGCGCAGGATGGCAGACAGGGCACCTCCAAACCCTCCTTCACAGCCCACATGGAGGCCCGCGTTCAGGGCTGTCGGCACCCAGGCAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGTGGGGAGACTGGGCTCAGTTTGGGGAGATCTGAGGTTCCCTCAGCCCCTCAACC-TTACTTA-TTTCCCAGAAGCCCATCCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697741 647 + 51301725 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGCGAAACCTTGTCTCTCAGCCCAGCCAGGCCCCATGGTGCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCATCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGCAGTGCCGAGGGTCAGTGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------CCCACGGAGGGAACTACAGATGCTTCGGCTCTTTCCGTGCCCTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCtgtcacaggtgaggaaaccccATGCCTGTCCCACGTCTTGT---------AATCCTAGAGCCATAGCTGAGGAACTTCCTTTTG--------------------ATGATGGAGA----GAAGCGTGGACAGATGC--AGAGAGAAGACAA-AGCCTGGGTGTGAGGGTGGGGTCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTTCACAGCCCACATGGAGGCCCGCGTTCAGGGCTGTCAGCACCCAGGCAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGTGGGGAGACTGGGCTCAGTTTGGGGAGATCTGAGGTTCCCTCAGCCCCTCAACC-TTACTCA-TTTCCCAGAAGCCCATCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378482 647 + 50890351 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTGTCTCTCAGTCCAGCCAGGCCCCATGGTTCAGGCAGGCGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCATCTATCCAGGGATGGGGAGGCCCATAGACTTAGGCTCCCTGCAGTGCCGAGGGTCAGTGGAACATTCCAGGCCGACTTCCCTCTGGGCCCTGCGA------CCAACGGAGGGAACTACAGATGCTTCGGTTCTTTCCGTACCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAAGTCCATGCCTGTTCCACGTCTTGT---------AATCCTAGAGCCATAGCTGAGGAACTTCCTTTTG--------------------ATGATGGAGA----GAAGCGTGAACAGATGC--AGAGAGAAGACAA-AGCCTGGGTGTGAGGGTGGGGTCATGGCACAGGATGGCAGACAGGGCACCTCCAAATCCTCCTTCACGGCCCACATGGAGGCCCGCGTTCAGGGCTGTCGGCACCCAGGCAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGAGGGCAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACTCA-TTTCCCAGAAGCCCATCCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772358 649 + 49145316 AAAATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAG--CCCACACCTGCCACCTGTCCTGTTGTCCACTAAGTCCCAGAGCCATACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATAC--AGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC-GCCCCTCCTACATGA--------------------------------------AGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCC-TTTTCCATTTTCTCCGAAGCCCCTCCTG i calJac3.chr22 I 625 C 0 a score=68732.000000 s hg38.chr19_GL949748v2_alt 726999 24 + 1064304 GCCTCTCACCCACACAGGGATGTC s panTro4.chr19 59662377 24 + 63644993 GCCTCTCACCCACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580919 24 + 60714840 GCCTCTCACCCACACAGAGATGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16608 24 - 21488 GCCTCTCACCCACACGGAGATGTC i nomLeu3.chr10_GL398297_2_random I 15579 C 0 s rheMac3.chrUn_JH290802 997 24 + 40826 GCCTCTCACCCACAGAGAGATGTC i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55627034 24 + 59248254 GCCTCTCACCCACAGAGAGATGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698388 24 + 51301725 GCCTCTCACCCACAGAGAGATGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379129 24 + 50890351 GCCTCTCACCCACAGAGAGATGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45773007 23 + 49145316 ACCCCTCA-CCACAGAGAGATTTC i calJac3.chr22 C 0 T 3003 a score=184342.000000 s hg38.chr19_GL949748v2_alt 727023 93 + 1064304 ATCACCAGCAACCCCTACACCCTTTAC-TTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATATAGCTTACCACCTTTAACAttttt----- s panTro4.chr19 59662401 88 + 63644993 ATCACCAGCAACCCCTACACCCTTTAC-TTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATATAGTTTACCACCTTTAACA---------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580943 89 + 60714840 ATCACCAGCAACCCCTACACCCTTTTCTTTTTGTTTGAAAAAATAtttattgaggtgaaatatacccatatagcttaccacctttaaca---------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16632 89 - 21488 ATCACCAGCAACCCTTACACCCTTTTCTTTTTGTTTGAAAAAATAtttattgtgattaaatatacctatatagcttaccacctttaaca---------- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 1021 94 + 40826 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTGGAAAAGTAtttattgaggtgaaatatacctatataatttatcacctttacca-----ttttt i rheMac3.chrUn_JH290802 C 0 I 1977 s macFas5.chr19 55627058 94 + 59248254 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTGGAAAAGTAtttattgaggtgaaatatacctatataatttaccacctttacca-----ttttt i macFas5.chr19 C 0 I 1975 s papAnu2.chr19 47698412 94 + 51301725 ATCACCAGCAATCCCTAcacccttttcttttcatttggaaaagtatttattgaggTGGAATATACCTATATAATTTACCtcctttacca-----ttttt i papAnu2.chr19 C 0 I 17761 s chlSab2.chr6 47379153 94 + 50890351 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTGGAAAAGTAtttattgaggtgaaatatacctatataatttaccacctttacca-----ttttt i chlSab2.chr6 C 0 I 16208 e calJac3.chr22 45773030 3003 + 49145316 T a score=375548.000000 s hg38.chr19_GL949748v2_alt 727116 339 + 1064304 tttttttttgaggcagagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaatttccgcctcctgggttcaagcgattctcttgcctcagccacctgagtagctggtgctacaggcgcgcaccaccacgccaggctactttttgtatttttagtagagaggtggtttcaccatgttggtcgagctggtctccaactcctgaccacgtgatccacccgcatgtgcctcccaaagtgctgggattacaggcatgagccaccacgcccagccACATTTACCATTTTTAAGTGTAAAGTCTAGTGGTCataaatacatt----------------tata s panTro4.chr19 59662489 351 + 63644993 tttttttttgaggcagagtcta--gctctgtcccctatgctgtagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtcctacaggcgcgcatcaccacgccaggctactttttgtattttcagtagagaggtggtttcaccatgttggtggagctggtctcaaactcctgaccacgtgatccacccacatcagcctcccaaagtgctgggattacaggcatgagacaccgcgcccggccACGTTTACCATTTTTAAGTGTAAAGTCTAGTGGTCATAAATACATTT---T-tatatgtatatata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581032 354 + 60714840 tttttttttgaggtggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgagttcaagcgattctcctccctcagccacctgagtagatggtactacaggcacgcaccaccacgccaggctactttttgtattttgagtagagagagggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccaccctcatcggcctcccaaagtgctgggattacaggcatgagccaccacgcccagccacatttaccatttttaagtgtaaagtctagtggTCataaatacatttatat-tatatatatatata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16721 346 - 21488 tttttttttgaggtggagtcta--gctctgtcccctacgctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtaccacaggtgcacaccaccatgccagcttactttct-tatttttagtaggggg--ggtttcaccctgttgttcaagctggtctcgaactcctgaccaggtgatccaccca------cctcccaaagtgctgggattataggcatgagccaacgcgcccggccacgtttaccatttttaagtgtaaagcctagtggtcataaatacatacatttgtttgtttgtttgtt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716267 333 + 51301725 ------tttgaggcgaagtcta--gctctgtcccctatgctggagtacagtggcacaacctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataaatacatttata---------------- i papAnu2.chr19 I 17761 C 0 s chlSab2.chr6 47395455 341 + 50890351 tttttttttgaggcggagtctcttgctctgtcccctatgctggagtacagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataaatacatttata---------------- i chlSab2.chr6 I 16208 I 64 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=-4671.000000 s hg38.chr19_GL949748v2_alt 727455 19 + 1064304 --------------------------------tatatata------------------------tatTTTTTTTT-------------- s panTro4.chr19 59662840 19 + 63644993 --------------------------------tatatata------------------------tTTTTTTtttt-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581386 43 + 60714840 --------------------------------tatatatatatatatatatattttttttttttttttttttttt-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17067 19 - 21488 --------------------------------tgtttgtt------------------------tgtttgtttgt-------------- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716600 89 + 51301725 tatttatgtgtgtgtgtgtgtatacatatatgtgtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatatatat i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47395796 64 + 50890351 I e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=130319.000000 s hg38.chr19_GL949748v2_alt 727474 107 + 1064304 TTTTTTTAccctccacccttttcttcctggcctctggaagccatcattctactctctaccttcatgagatccaccttttagct-ctgtatatgggtgagaaatgggaa s panTro4.chr19 59662859 108 + 63644993 tttttttaccctcttcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccacattttatctcctgtatatgggtgagaaatgggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581429 108 + 60714840 tttttttAccctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttcgctcctgtatatgggtgagaaatgggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17086 108 - 21488 ttgtttTAccctccacccttttctccctggcctctggtagccaccattctactctctcctttcatgagatccaccttttagctcttgtgtatgggtgagaaatgggaa i nomLeu3.chr10_GL398297_2_random C 0 T 15772 s papAnu2.chr19 47716689 107 + 51301725 ttttttaaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395860 108 + 50890351 tTTTTTAAccttcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaa i chlSab2.chr6 I 64 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=10290.000000 s hg38.chr19_GL949748v2_alt 727581 12 + 1064304 tctttgtaatga s panTro4.chr19 59662967 12 + 63644993 tctttgtaatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581537 12 + 60714840 tctttgtaatga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47716796 12 + 51301725 TCTTTGTAATGa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395968 12 + 50890351 tgtttgtaatga i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17194 15772 - 21488 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=728662.000000 s hg38.chr19_GL949748v2_alt 727593 607 + 1064304 cttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtcatcttggctcattgcaacctctgcctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgcacgccaccatgcctggctactttttgttttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgagatgcccgcctcagtctcccaaagtgccgggattacaggcctgatccaccacacccaacctctttttagttctttaaaggacttccatacttt s panTro4.chr19 59662979 607 + 63644993 cctccagttccatccatgtggctgcaaatgacaggatgttattctttctgtggatgagtagtctccactgagtgtatgtaccacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaagagtgctgcaccaatcatacgagtgtagatatcacatcgatatattcatttattttcctttggacatcaacccagtagtgaaattcctggatactatgaaagttctctttttagttttttgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaatctccgcctcctgggttcagatgattttcctgcctcagcctccgtagtagctgggatcacaggtgcatgccaccatgcctggctactttttgttttttttagtatacatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggagcccgcctcaggctcgcaaagtgctgggattacaggcatgatccactgcacccaagctatttttagttctttcaaggactcgcatacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581549 607 + 60714840 cctccagttccatccatctagctgcaaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctatccattcacccactgatgggcaggtaagttgactccacatcttggctacggtgaacagtgctgcaccaatcatacaagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgacggttctctttttagtttttcgtttgttgtttttgtttttgtttttgagacactttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgagttcaaacgattttcctgcctcagcctccctagtagcagggattacaggtgcacgccaccatgcctggctactttttgtattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcgttctcgcaaagtgctgggattacaggcgtgatccaccgcacccaacctctttttagttctttaaaggactttcatacttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 1422 606 - 21488 cctccagttccatccatgtgggtgcaaatgacagggtgttattgtttctatggatgagtagtctccactgtgtg--tgtactacattctctctatccattcacccactgacgggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatacgagtgcagatatcacttcgatatattgatttcctttccttcggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtgcaagtgatgtgatcttggcccattgcaacctccgcctcctgggttcagacgattttcctgcctcaccctccccagaagcaggcattacaggtgcaagccaccatgcttggctactttttatattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcctgcctcggtctcgcaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatgcttt i nomLeu3.chr10_GL398297_2_random T 15772 C 0 s papAnu2.chr19 47716808 607 + 51301725 gctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaagttctctttttagtttttcatttgttgtttttgttttggtttttgagacagtttccctctgtgcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395980 600 + 50890351 gctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgccttggtttttgagaccgtttccctctgtgcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 C 0 I 42340 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=338809.000000 s hg38.chr19_GL949748v2_alt 728200 416 + 1064304 tctccgtaatcgctgtactaatttacactcctcccaacagggtaccagggttctcctttctctaccaccttgccagcatttcttttgcctgtcttgcagctaaaagcc---attttattttatttcat--------------------------------------tttattttgagatggagttttgctcttctcacccaggcaggagtgcagtggcgctatctcggctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctggaattacaggcacactccaccacgcccgactaatttttgtatttttagtagagacagtgtttctctatgtgggtcagactggtctcaaactcctgaccttatgagattcacccacctcaggctctcaaagttctaggatgacagacgtgagccaccacgcccggcc s panTro4.chr19 59663586 440 + 63644993 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctaccaccttgcctgcatttcttttgcctgtcttgcagctaaaagcc---attttattttatttcattttat-------------tttattttattttatttta-tttattttgagatggagtttcgctcttctcacccaggctggagtgaaatgacgtgatctcggctcaccgcaacctgcacctcccaggttcaagcgattgtcctgcctcagcctcctgagtagctgggattacaggcacacgccaccacgcccggataatttttgtgtttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagattcgcccacctcgggctctcaaagttctaggatgacagatgtgagccaccacacctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582156 420 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcatttcttttgcctgtcttgcagctaaaagcc---gttttattttattttattttat---------------------------------tttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacacaccaccatgctcgtctaatttttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaact-ctgaccttaggagattcgcccacctcgggctctcaaagttctaggatgatagaggtgagccaccacgcccggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2028 456 - 21488 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctaccaccttgccagcatttgttttccctgtcttgcagctaaaagcctttattttattttattttattttattattttattttattttattttattttattttattttattttgagatggagttttgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccatctcccaggttcaagtgattctcctgccttagcctcccaagtagctggaattacaggcacaggccaccacgcgcggctaatttttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagatttgcccacctc-ggctctcaaagatctaggatgacagatgtgagccaccacgcccggcc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47717415 440 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagcc---attttattttattttattttat-------------tttattttattttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctcccaaatagctggaattacaggaatgtgccaccacgcccagcttatttttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaactcccgacctcaggtgattcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcc i papAnu2.chr19 C 0 T 17376 e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=51013.000000 s hg38.chr19_GL949748v2_alt 728616 102 + 1064304 taaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgatactgagcactttttagtatgtggggaaat s panTro4.chr19 59664026 102 + 63644993 taaaagccattttaatgggatgagatgaaaactcactttgattttaatttgcatttctctgatgatgagtgatagtgaccactttttcatatgcggggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582576 102 + 60714840 taaaagccatcttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctaatgatgaatgatactgagcattttttcatatgtggggaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2484 102 - 21488 taaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcatttctctgatgatgagtgatactgagcactttttcatatgcagggaaat i nomLeu3.chr10_GL398297_2_random C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e papAnu2.chr19 47717855 17376 + 51301725 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=272876.000000 s hg38.chr19_GL949748v2_alt 728718 346 + 1064304 ttcatgtcttctgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtt-tatttttagcagtgcagaagttgcttagtttgaggtaatcccaatggtcta-tttttgcttcgattacttgtgttttcaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttgttctacgtgtttcataggttcaggccttagactcacatctttaatccattttcatttg s panTro4.chr19 59664128 347 + 63644993 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagtcattaatcccatctcagatgcatagtttgcacattgttgctcccagtctgtgggttgtctcttcactttgttggtt-tatctttagtggtgcagaagttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcgtggagcatttccccaatattttcttctacgtgtttcataggttcaggccttagactcacatctttaatccattttcattcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582678 344 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgag---cttatatttctagtcattaatcctgtcttagatgcatagtttgcacatatttgctcccaatccgtgggttgtctcttcactttgttggtt-tatctttagcggtgcacaggttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgcgttttgaaggttttaaacaaaacgtccttcctcagacaaatgtcctggagcatttcctcaatattttcttctacgtgtttcataggttcagcccttagactcacatctttaatccattttcatttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2586 347 - 21488 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttctttgagcttcttatatttctagttattaatcttgtctcagatgcatagtttgcatgtatttgctcccaatctgtgggttgtctcttcactttgttggtt-tatctttagcagtgcagaagttgcttagtttgatgtaaccccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacatgtctcataggttcaggccttagactcacatctttaatccattttcatttg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47438920 348 + 50890351 ttcatgtcttttgctcattttttagttaaattctttgttttattgagttatgtgagcttcttatatttctagttataaatcccgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttatttgttttgcagtgcagaagctgcttagtttgatataatccctgtggtctgttttttgctttgattacttgtgtttttgaagtattaaacaaaatgtcttttctcagacaaatgtcctgaagcatttccctaatatttccttctacaaatttcataggttcaggacttagactcatgtatttaatccatttggatttg i chlSab2.chr6 I 42340 T 42370 e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47717855 17376 + 51301725 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=361524.000000 s hg38.chr19_GL949748v2_alt 729064 433 + 1064304 a-tttttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtcgatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggctgggcttggtggctgacacctgcaatttcagcactttgggaggccgaggcgggtggattacctgaggccaggagttcaagatcagtctggacgacgtgatgaaacatcgtctccactaaaaatataaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcaagagaa-tgattgaacccaggaggctgaggttgcagtgaactgagattgcacctctgcactccagcctgagtgacagagcaagactccatctcaaaagaaaaaata---- s panTro4.chr19 59664475 434 + 63644993 a-tttttgtgtttggtgacaggtagaggtgcagtttcattcttctgcatgtagatatccagttttccctgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggctgggcattgtggcccacacctgcaattccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctgaccaacatggtgaaacattgtctgtactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggtgagagaattgattgaacccaggaggctgaggttgcagtgaaccaagattgcacctctgcactccagcctgggtgacagaacaggaatccatctcaagagaaaaaata---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56583022 434 + 60714840 a-tttttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcactgtgtattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccaatggatgggctgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcaggcggatcacctgaggccagcagttcaagatcagcctggccaacatggtgaaacatcatctctactaaaaatacaaaaatcagctgagcatgatggtcagcacctgtaataccactattcaggagtttgaggcgagagaattgattgaacccaggaggcggaggtggcagtgaactgagattgcacctctgcactccagcctggatgacagagtgagactccatctcaaaagaaaaaata---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2933 435 - 21488 attttttgtgtatggtgacaggtagaggtgcagtttcattcctatgcatgtagatatccagttttccccgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggctgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcgggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcgggagtttgaggcgagagaattgattgaacccaggaggctgagtttacagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactctatctcaaaagaaaaaata---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47396898 438 + 50890351 a-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcacagtttattaaaaagtctgtcctttcctgattgtaagttcttggcacctttgtcaaagtccatcagatggactgggcatggtggttcacacctgcaattccagcactttgggaggctgaggcaggtggatcacctgaggcctggagttcaagatcagcctggccatcatggtgaaacatcgtctgtactaaaaatacaaaaattagctgagcatggtggtcggcgcctgtaataccactactcaggagtttgaggcaaaagaattgattgaacccaggaggctgaggttgcagtgaactgagattgcacctctgtactccagcccgggtgacagagcgagattctatctcaaaagagaaaaaaaaaa i chlSab2.chr6 T 42370 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47717855 17376 + 51301725 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=5615.000000 s hg38.chr19_GL949748v2_alt 729497 5 + 1064304 aaaaa s panTro4.chr19 59664909 5 + 63644993 aaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56583456 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 3368 5 - 21488 aaaaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47700479 3 + 51301725 --AAA i papAnu2.chr19 T 17376 I 2 s chlSab2.chr6 47397336 5 + 50890351 aaaaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55627152 1975 + 59248254 I e rheMac3.chrUn_JH290802 1115 1977 + 40826 I a score=4102.000000 s hg38.chr19_GL949748v2_alt 729502 2 + 1064304 cc s panTro4.chr19 59664914 2 + 63644993 ac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56583461 2 + 60714840 cc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 3373 2 - 21488 cc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 3092 2 + 40826 cc i rheMac3.chrUn_JH290802 I 1977 C 0 s macFas5.chr19 55629127 2 + 59248254 cc i macFas5.chr19 I 1975 C 0 s papAnu2.chr19 47700484 2 + 51301725 CC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47397341 2 + 50890351 cc i chlSab2.chr6 C 0 T 16116 e calJac3.chr22 45773030 3003 + 49145316 T a score=3795379.000000 s hg38.chr19_GL949748v2_alt 729504 1814 + 1064304 attggatgtaaatgcatggaatatatctgtgttattcattctgctccgttgttctatgtccctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATAAAAAAATTATGGAAAAAAGGATCCCAGGACTCCCAGGGCCCAATATTAGATAACAGAGTG-TTGGCCATGAACCATCCTCAAAGATTTCCACTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCGTTGACTCAGCATCTCACAGCTCTGACATTGTACCCCTGTCTTCCACCATCTCCGAACTCCAGATACTCCTACAGCGAAAGGGATCTGGGTCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACTTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG---------------G-AAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGAGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTG-TTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTATAGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGAAAGAGCCTTGCTGTAACAGAGAACAGAGCTCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCACTGTGGAAGCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttttttaattatcttacagtgctgtagctca-aagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaggattccaggcaagaatctgcttctcacttttctcagcttctagaggctcccacattccttcgctcctggtccccttcctccttcctcaaagcccacaaagactggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcattcaggatacccttgttttaagttcagctgattagcaaccataattccatctgcaatcttcattcctcctttccatgtaaaataagatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTTGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGTATGAAATCTAttt----gtttgtttcttcatttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcaccatcttggctcactgcaacctgcaccttctggatccaagtgattctcctgcgtcagcctctcaagtagctgggattacaggcaactgccaccatgcccggctaattcttttt-gtatatttttt-gt--agag s panTro4.chr19 59664916 1813 + 63644993 attggatgtaaatgcatggattatatctgtgttcttcattctgctccgttgttctatgtgcctttccttatgccaacatcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgtttactctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATATAAAAATTATGGAAAAAAGGATCCCTGGACTCCCAGGGCACAATATCAGATTACAGAGTG-TTGGCCATGAACCAACCTCAAAAATTTCCATTGAATAGAGGACAGACACTCACATTTCCTCACCTGTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAATCAAGCTCCAAAACCAGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGAGTCAGCATCTCACAGCTCTGACATTGGGCGCCTGTCTTCCACCATCTCCGAACTCCAGATACTTCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATCGCCAATCTGACATCTTTCTCAG---------------G-AAAAATGCAATGTTTCTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCCGATGAGGGCGAGGTG-TTTTAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCACGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCACGCATGCACACTTTGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttatttaattatcttacagtgctctagctca-aagtacgaagtgcatgtcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaagcccacaaaggctggtcacatctcacatggcatcactcagacacttcctcctta-ccacacctctttctctgaatgctgctctcccttcttccttatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcatccaggatactcttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctccttccc-tgtaaaataacatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGACGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAGTGAATGATCCACTGGGAAGCATCTGTGCATGAAATCTAttt-----tttgtttgttcgtttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgtgtctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattataggcaactgccaccatgcccggctaattcttttt-gtatatttttt-gtagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56583463 1816 + 60714840 attggacgtaaatgcatggattatatctctattattcattctgctccattgttctatgtgcctttctttatcccaacgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctcttttctctttACACCTTGAAGTCTCAAGACACTGGGCGTCACATATAAAAATTATGGAAAAAAGGATCCCAGGACTCCCTGGGCCCAATATTAGATAAGAGAGTG-TTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCGTGTCCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCCAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCTGTTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGACTCAGCATCTCACAGCTCTGACATTGTGCGCCTGTCTTCCACCATCTGCAAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAACTGAGACCTCTTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG---------------G-AAAAATGCAATGTTTGTTCTCCCTGCATTCCTAACTGGAGAATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAAGGAACATCTGATGAGGACGAGGTG-TTTTAGAGAAGTTCCACTTGTCAAGGAATGAGCTTCTGTTGGTCATGAAGCAACTCTGGCTGACTCATCAGAGCAAGAGCCTTGCCGTAACAAAGGACAGAGCTCATGCATGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaaaattcgtgggtgaaaacaaaacggttttttaattatcttacagtgctatagctca-aagtatgaagtgcatctcactgggttaaaatcaaggtgacagcaaggctgccttccctctgaagtttccaggcaagaatctgcttctcacttgtcccagcttctaaaggctcccatgttccttggctcccggtccccttcctcctttctcaaaatccacaaagactggtcacatctcgcatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgcttacacttcttcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccagaaatcatccaggataccctggttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccacataaaataacatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAttt----gtttgtttgttcgtttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgcgtctcctcgattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaactgtcatcatgcccggctaattcttttt-gtatttttttt-gtagagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 3375 1821 - 21488 attagatgtaaatgcgtggattatatctgtgttattcattctgctccattgttctatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACATATAAAAACTATGGAAAAAAGGATCCCAGGACTCCCCAGGCCCAATATTAGATAACAGAGTG-TTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACTCTCATTTCCTCACCTCTCTCCTGTCTCGTGTTCTAGGAAACCCTTCAAACAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATGCAGGCGTTGACTCAGCATCCCACAGCTCTGACATCGTGTGCCTGTCTTCAACCATCTCTGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG---------------GAAAAAATGCAGTGTTTGTTCTGCCTTCATTCCAAACTGGAGGATAAATTCCTGAGGGCTTGAGAGAGGGAAGAGAAGGGAACATCTGACGAGGGAGAGGTG-TTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACACAGAACAGAGCTCATGCACGTACACTTCGACTCACTGACTCATTCGGCCGCGGCCCCATGTTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcatgggtgaaaacaaaacagttatttaattatcttacagtggggtagctca-aagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttcccactgagggttccaggcgagaatctgcttctcacttgtcccagcttctaaaggctcccatgttccttggctcctggtcccattcctccttcctcaaaacccacaaagactggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctcggaatgctgctctcccttcctcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccaccacaatctcccggaaatcatccaggatacccttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatggaggttaggacagggacattttggggtgggacagccttctcctgccttccgcaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGGCCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACGAAATCTAtttgtttgtttgtttgtttgtttgtttAttgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcaccctcttgagtagctgggattacaggcaactgccaccacgcccggctaattcttttt-gtacatttttt-gtagagag i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 3094 1800 + 40826 attggatgtaaatgggtggattacgtctgtgttcttcattttgctccattgttctatgggtctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacgtatttttaagtcaggtagtgtgatgctcctgttttctcctCATACCTTGAAGTCTCAAGACAGTGAGCATCACATACAATGATTATGGAGAAGGGTACACCAGGACTTCCAGGGCCCAACATTAGATAACAGAATGTTTGGGCATGAACCAACCTTAAAGGTTTCCATTGAGTAGAAGACAGGCATCTTCATTTCCACACCTCTCTACTGTCCTGTGTTCTAGGAAACTCTTCAAGTACTTGGTCTTCACCCACAGAACCAAGCTCCAACACTGGTGAGTAAAGAACCCCTCTTGTCTCTGCTTTTGGAAACCTGGAGAGGTGGAAGCCTTGGATTCAAGCGTTAGCTCAGCTCCT------TCTGGGATTATGGGCCTGTCTTCTGCTGTCTCTGAACTCTAGACACTCCAACAGCACAAGGGATCTGGGGCCAACACAA---TCAGTGAAGTCTCTTAATCTCTAATTTTCTGCACCTGAGACCTC---CAAGCTAGAAGGATGAGTGCAAATCTGACACCCTTCTCAG-------AAAAAAAAA-AAAAATGCAGTATTTTTTCTGCCTGCATTCCTAACTGCAGGATAAATGCCTGGGGGCTTGAGAAAGGGAGGTGAAAAGAACATCTGATGAGGGTGGGATGTTTTTAGAAAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGACGCAATCCTGGTTGACTCAGCAGAGCAAGAAACTTGTAGTAACAGAGCATTTAGTTCATTTATGCACA---TGA--CACTCACTTGTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAAtattttcctattgttgccataacaaatttccacaagctttgtggatgaaagcgtgtt--tttcttaattatctcacagtgctatagctcagaagtacgaaatgcatctcactgggctgatatcaaaggcacagcaaggctgaacttctttttaaggttccaagcaagaatctgctccttacatttcccagttcctagaggctcccacgttctttggcccctagaccctttcctccttcctcaaagcccatgaaggctggtcacgtctcacatggcatcattcagac---tcttcttcacccacacctctttctctgaatgctactctgcctttttcctcatc-tttaaggactttgggattctattggggtcaccaagat---aatccatcataatctccctaaaatcgtctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgtaatcttcattcctcctttca-tgtaaaataatatattcacaagctatggaggctaggacagggacattttggggtggggaagcattcgcctgccttccacaAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTGttt----ttttggtttttgttttgtt--ttgaggtagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaaaattttttggtatattttttagtagag-- i rheMac3.chrUn_JH290802 C 0 I 27 s macFas5.chr19 55629129 1801 + 59248254 attggatgtaaatgggtggattacgtctgtgttcttcattttgctccattgttctatgggtctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacgtatttttaagtcaggtagtgtgatgctcctgttttctcctCATACCTTGAAGTCTCAAGACAGTGAGCATCACATACAATGATTATGGAGAAGGGTACACCAGGACTTCCAGGGCCCAACATTAGATAACAGAATGTTTGGGCATGAACCAACCTTAAAGGTTTCCATTGAGTAGAAGACAGGCATCTTCATTTCCACACCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAAGTACTTGGTCTTCACCCACAGAACCAAGCTCCAACACTGGTGAGTAAAGAACCCCTCTTGTCTCTGCTTTTGGAAACCTGGAGAGGTGGAAGCCTTGGATTCAAGCGTTAGCTCAGCTCCT------TCTGGGATTATGGGCCTGTCTTCTGCTGTCTCTGAACTCTAGACACTCCAACAGCACAAGGGATCTGGGGCCAACACAA---TCAGTGAAGTCTCTTAATCTCTAATTTTCTGCACCTGAGACCTC---CAAGCTAGAAGGATGAGTGCAAATCTGACACCCTTCTCAG------AAAAAAAAAA-AAAAATGCAGTATTTTTTCTGCCTGCATTCCTAACTGCAGGATAAATGCCTGGGGGCTTGAGAAAGGGAGGTGAAAAGAACATCTGATGAGGGTGGGATGTTTTTAGAAAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGACGCAATCCTGGTTGACTCAGCAGAGCAAGAAACTTGTAGTAACAGAGCATTTAGTTCATTTATGCACA---TGA--CACTCACTTGTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAAtattttcctattgttgccataacaaatttccacaagctttgtggatgaaagcatgtt--tttcttaattatctcacagtgctatagctcagaagtacgaaatgcatctcactgggctgatatcaaaggcacagcaaggctgaacttctttttaaggttccaagcaagaatctgctccttacatttcccagttcctagaggctcccacgttctttggcccctagaccccttcctccttcctcaaagcccatgaaggctggtcacgtctcacatggcatcattcagac---tcttcttcacccacacctctttctctgaatgctactctgcctttttcctcatc-tttaaggactttgggattctattggggtcaccaagat---aatccatcataatctccctaaaatcgtctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgtaatcttcattcctcctttca-tgtaaaataatatattcacaagctatggaggctaggacagggacattttggggtggggcagcattcgcctgccttccacaAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTGttt----ttttggcttttgttttgtt--ttgaggtagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaaaattttttggtatattttttagtagag-- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47700486 1813 + 51301725 ATTGGATGTAAATGGGTGGATTACCTCTGTGTTCTTCATTTTGCTCCATTGTTCTATGGGTCTTTCTTTATGCCAAtgtcatgctgttttgcttactacaGCTCTGTAACGTATTtttaagtcaggtagtgtgatgctccTGTTTTCTCCTCATACCTTGAAGTCTCAAGACAGTGAGCATCACATACGATGATTATGGAGAAGGGTACACCAGGACTTCCAGGGCCCAACATTAGATAACAGAATGTTTGGGCATGAACCAACCTTAAAGGTTTCCATTGAGTAGAAGACAGGCATCTTCATTTCCACACCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAAGTACTTGGTCTTCACCCACAGAACCAAGCTCCAACACTGGTGAGTAAAGAACCCCTCTTGTCTCTGCTTTTGGAAACCTGGAGAGGTGGAAGCCTTGGATTCAAGCGTTAGCTCGGCTCCT------TCTGGGATTGTGGGCCTGTCTTCTGCTGTCTTTGAACTCCAGACACTCCAACAGCACAAGGGATCTGGGGCCAACACAAGGCTCAGTGAAGTGTCTTAATCTCTAATTTTCTGCACCTGAGACCTC---CAAGCTAGAAGGATGAGTGCAAATCTGACatccttctcagaaaaaaaaaaaaaaaa-aaaaaagcagtatttttTCTGCCTGCATTCCTAACTGCAGGATAAATGCCTGGGGGTTTGAGAAAGGGAAGTGAAAAGAACATCTGATGAGGGTGGGATGTTTTTAGGAAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTCTCATGACGCAACCCTGGTTGACTCAGCAGAGCAAGAAACTTGTAGTAACAgagaatttagttcatttatGCACA---TGA--CACTCACTTGTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAATCTTTTCCTATTGTTGCCATAACAAATTTCCACAAGCTTTGTGGATGAAAGCATGTT--TTTCTTAATTATCTCACAGTGCTGTAACTCAGAAGTATGAAATGCATCTCACTGGGCTGATATCAAAGGCACAGGAAGGCTGAACTTCTTTTTAAGATTCCAAGCAAGAATCTGCTCCTTACATTTCCCAGTTCCTAAAGACTCCCATGTTCTTTGGCTCCTagtccccttcctccttcctcaaaGCCCATAAAGGCTGGTCACGTCTCACATGGCATCATTCAAACTGTTATTCTTCACCCACACCTCTTTCTCTGAATGCTACTCTgcctttttcctcatc-tttaaggACTTTGGGATTCTACTGGGGTCACCAAGAT---AATCCATCATAATCTCCCTAAAATCGTCTAGGATACCCTCCTTTTCAgttcagctgattagcaaccatAATTCCATCTGCAATCTTCATTCCTCCtttca-tgtaaaataatatattcacaaGCTATGGAGGCTAGGACAGTGACATTTTGGGGTGGGgcagcattctcctgccttccaCAAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAaatctgttt----ttttggtttttgttttgtt--ttgaggtagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctactgagtagctgggattacagccatgcaccaccacactcagctaaaattttttggtatattttttagtagag-- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47381227 1808 + 50890351 attggatataaatgggtggattacatctgtgttcttcattttgctccattgttctatgggtctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttttaagtcaggtagtgtgatgctcctgttttctcctCATACCTTGAAGTCTCAAGACAGTGAGCATCACATACAATGATTATGGAGAAGGGTACACCAGGACTTCCAGGGCCCAACATCAGATAACAGAATGTTTGGGCATGAACCAACCTTAAAGGTTTCCATTGAGTAGAAGACAGGCATCTTCATTTCCACACCTCTCTCTTGTCCTGTGTTCTAGGAAACTCTTCAAGTACTTGGTCTTCACCCACAGAACCAAGCTCCAACATTGGTGAGTAAAGAACCCCTCTTGTCTCTGCTTTTGGAAACCTGGAGAGGTGGAAGCCTTGGATTCAAGCATTAGCTCAGCTCCT------TCTGGGATTGTGGGCCTGTCTTCTGCTGTCTCTGAACTCTAGACACTCCAACAGCACAAGGGATCTGGGGCCAACACAAGGCTCAGTGAAGTCTCTTAATCTCTAATTTTCTGCACCTGAGACCTC---CAAGCCAGAAGGATGAGTGCAAATCTGACACCCTTCTCAG----aaaaaaaaaaaa-aaaaaTGCAGTATTTTTTCTGCCTGCATTCCTAACTACAGGATAAATGCCT-GGGGCTTGAGAAAGGGAAGTGAAAAGAACATCTGATGAGGGTGGGATGTTTTTAGAAAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTCTCATGACGCAACCCTGGTTGACTCAGCAGAGCAAGAAACTTGTAGTAACAGAGAATTTAGTTCATTTATGCACA---TGA--CACTCACTTGTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAATCTtttcctattgttgccataacaaattgccacaagctttgtggatgaaagcatgtt--tttcttaattatctcacagtgctgtagctcagaagtatgaaatgcatctcactgggctgatatcaaagggacaacaaggctgagcttctttttaaggttccaagtaagaatctgctccttacatttcccaactcctagaggctcccacgttctttggcccctggtccccttcctccttcctcaaagcccacaaaggctggtcacgtctcacatggcatcattcagactcttcttcttcacccacacctctttctctgaatgctactctgccttcttcctcatc-tttagggactttgggattctattggggtcatcaagat---aatccatcataatctccctaaaatcatctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttca-tgtaaaatgacatagtcacaagccatggaggctaggacagggacattttggggtggggcagcattctcctgccttccacaAATGGTAAACAGGGTGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCCACAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTGttt----ttttggtttgtgttttgtt--ttgaggtagagtctcactctgtcccacaggctggagtgcagtgacacaatctcaactcactgcaacctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaattttttttggtatattttttagtagag-- i chlSab2.chr6 T 16116 I 2 e calJac3.chr22 45773030 3003 + 49145316 T a score=30649.000000 s hg38.chr19_GL949748v2_alt 731318 26 + 1064304 gatgtttcaccatcttcgccaagctt s panTro4.chr19 59666729 26 + 63644993 gatgtttcaccatgttggccaagctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585279 26 + 60714840 gatgtttccccatgttggccgagctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5196 26 - 21488 gatgtttcaccatgttggccaagctt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55630932 26 + 59248254 gaggtttcaccgtgttgtgcaggctg i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47702301 26 + 51301725 gaggtttcaccgtgttgtgcaggctg i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47383037 25 + 50890351 gaggtttcaccgtgttgtgcagtct- i chlSab2.chr6 I 2 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chrUn_JH290802 4894 27 + 40826 I a score=307100.000000 s hg38.chr19_GL949748v2_alt 731344 139 + 1064304 ctctgaaactcccaacctcaagtgatccgaccgtctcagcatcctaaagtactgggataactggcgtgagccactgtgcccagccAGAATTTAAAATAAATAATACATAATGCTGAGTGTATGATTTTGGGTGACAGAG s panTro4.chr19 59666755 139 + 63644993 gtctgaaactcccaacctcaagtgatccaaccacctcagcatcccaaagtactgggattacaggcgtcagccactgcgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtatgattttgggtgacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585305 139 + 60714840 gtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacagacgtgagccactgtgcccagccAGAATTTAAAATAAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5222 139 - 21488 gtctgaaactcccaacctcaaatgatccaaccatctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATAAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAG i nomLeu3.chr10_GL398297_2_random C 0 I 15601 s rheMac3.chrUn_JH290802 4921 139 + 40826 gtctcaaactcccaatctcaagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagccAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagag i rheMac3.chrUn_JH290802 I 27 C 0 s macFas5.chr19 55630958 138 + 59248254 -tctcaaactcccaatctcaagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagccAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47702327 138 + 51301725 -tctcaaactcccaatctcaagtaatctgactgccttggcctccctaagtgcaaggattataggcgtgagccactgtgccaagccaggatttaaaataaataatagataatgCTGAGTGTATAATTTCAGGTGACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383062 139 + 50890351 gtctcaaactcccaatctcgagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagtcAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=254760.000000 s hg38.chr19_GL949748v2_alt 731483 124 + 1064304 AAGATCTCACTAATCAG---ATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCAGAAAGCTGAAAACAATCT s panTro4.chr19 59666894 124 + 63644993 aaggtctcactaaacag---atatttgtgacattaatgaaaaacacggattgaacccctggaagattggcagaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaaacaatct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585444 124 + 60714840 AAAGTCTCACTAATCAG---ATATTTGTGACATTAATCAAAAACATGGATTGAACACCTGAAAGATTGGCAGAAGGATTTTCCACACACAGCTGTCAGCTGTGAAGGCACAAAAGTGAAAACAATCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20962 122 - 21488 AGGGTCTCACTAATCAC---ATATTTGTGATGTTAATGAAAAAAATGGATTCAACCCATGGAAGACTGGTGGAAGGATTTTC--CACACAACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCT i nomLeu3.chr10_GL398297_2_random I 15601 C 0 s rheMac3.chrUn_JH290802 5060 127 + 40826 aaggtctcactgatcagataatatttatgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaggattttgcacactgagctctcagctgtgaaagcacaaaggtggaaacattct i rheMac3.chrUn_JH290802 C 0 I 42 s macFas5.chr19 55631096 127 + 59248254 aaggtctcactgatcagataatatttatgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaggattttgcacactgagctctcagctgtgaaagcacaaaggtggaaacattct i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47702465 127 + 51301725 AAGGTCTCACTGATCAGATAATATTTGTGAccttaatgaaaaaaatggatTCAACCCTTGGAAGATTGGCAGAAGGATTTTCCACACTGAGCTCTCAGCTGTGAAGGCACAAAGGTGGAAACATTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383201 127 + 50890351 aaggtctcactgatcagataatatttgtgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaagattttccacactgagccctcagccgtgaaggcaaaaaggtggaaacattct i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=4468.000000 s hg38.chr19_GL949748v2_alt 731607 7 + 1064304 GATGTGG s panTro4.chr19 59667018 7 + 63644993 gatgtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585568 7 + 60714840 GATGTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 21084 7 - 21488 GATGTTG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55631226 7 + 59248254 taagttc i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47702592 7 + 51301725 TAAGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383328 7 + 50890351 tatgttc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chrUn_JH290802 5187 42 + 40826 I a score=42835.000000 s hg38.chr19_GL949748v2_alt 731614 20 + 1064304 AAGGAAGAGGCTCTGC-CTCA s panTro4.chr19 59667025 20 + 63644993 aaggaagaggctctgc-ctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585575 21 + 60714840 AAGGAAGAGGTTCTACATTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 21091 20 - 21488 AAGGAAGAGGCTCTGC-CTGA i nomLeu3.chr10_GL398297_2_random C 0 T 15750 s rheMac3.chrUn_JH290802 5229 20 + 40826 AAGGAAGAGGCTCTGC-CCGA i rheMac3.chrUn_JH290802 I 42 C 0 s macFas5.chr19 55631233 20 + 59248254 aaggaagaggctctgc-ctga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47702599 20 + 51301725 AAGGAAGAGGCTCTGC-CCGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383335 20 + 50890351 aaggaagagGCTCTGC-CCAA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=1297355.000000 s hg38.chr19_GL949748v2_alt 731634 619 + 1064304 AATGCTGGGAATGAGGTGGGGAGAATGACAAGACGACTGTGGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGG-TAGCCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAACTGGGTGAAGCAGATGGATATAAGCTATGCTTGTGAGGTGGAATCATTGGCTGGAAAGGCTTGCTGGGTATGA-TTTTCCTAGTTGTCTAATCCTCGC----TTAATTTCTTTCTGAGCTTTA--TTCCTACTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTATT---ATAGCATAATATACAAGTCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaaggcgggtggatcacatgaagtcagcagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaacacaaaaattagcc s panTro4.chr19 59667045 623 + 63644993 aatgctgggaatgagatggggagaatgacaagacgactgtggagagacggagagcACACTGGGTACACAGGAAACGAAGGAGGAACAAAGGGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGG-TAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGCGTGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAAGTGGATGAAGCAGATGGATATAAGCTATGCTTGTGAGGTGGAATCATTGGCTGGAAAGGCTTGCGGGGTATGA-TTTTCCTAGTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTA--TTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTATT---ATAGCATAGCATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattcgatgaagtcaggagtttcagaccagcctggccaacatggtgaaaccctatctctatgaaaaatacaaaaattagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585596 623 + 60714840 AATGCTGGGAATGAGATGGGGAGAATGACAAGACGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGG-TAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGCAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGGATATAAGATATATTTGTGAGGTAGAATCATTTGCAGGGAGGGCTTGCAGGGTTTGA-TTTTCCTCGTTGTTTAATCCTCAGTAAATTAATTTCTTTCTGAGATTTA--TTCCTCCTACAGGTAAATCAATACCTGGCAAAGGAGTGACGGATATATGAGGGGTGGTGGAGATGAAGGGACCTATT---ATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaacacaaaaattagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5361 621 - 21488 AATGCTGGGAATGAGATGGGGAGAATGGCAAGTCGACTGTAGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACT--CAGACATTGGATTCACCTCGGGG-TAACTAGGAATCCCTACATGATTAATAGCGACTGACATGAAAATAAGGGAGGCCCAGGTATGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTCGACACCAAGTGGATGAAGTAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTACTGGGTTTGA-TTTTCCTAGTTGTTTAATCCTTGCTTCATTAATTTCTTTCTGAGATTTA--TTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTAGAAATGAAGGGACCTATT---ATAGCATAATATACAAGTCTGTGAAcggtggctcgctcccgtaacccagcactgcaggaggccaaggctggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagcc i nomLeu3.chr10_GL398297_2_random T 15750 C 0 s rheMac3.chrUn_JH290802 5249 623 + 40826 AACTCTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAAGAGAAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTATACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGACGTGAAAATAAAGGAGGCCCCGGTGCGTAACTGGAATCTAGGAGATTGTTGAAAAGGCAATTCCCACCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTATTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGTAATGGACACATGAGGGGTGGTGCAAATGAAAGGACCTAGT---ATAACATAATATACGAGACTGG--ATgggggctcatgcctgtaacccaacacttttggatgccaaggtgggtgcatcctttgagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcc i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55631253 623 + 59248254 aacgctgggaatgagatggggagaattacaagaCCACTGGAGAGAGACAGAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTATACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGACGTGAAAATAAAGGAGGCCCCGGTGCGTAACTGGAATCTAGGAGATTGTCGAAAAGGCAATTCCCACCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTATTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGTAATGGACACATGAGGGGTGGTGCAAATGAAAGGACCTAGT---ATAACATAATATACGAGACTGG--ATgggggctcatgcctgtaacccaacacttttggatgccaaggtgggtgcatcctttgagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47702619 627 + 51301725 AACGCTGGGAATGAGATGGGGAGAATTACAAGACcactggagagaga-ggagagcacACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTACACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAACAGTGACTGACGTGAAAATAAGGGAGGCCCCAGTGCATAACTGGAATCTAGGAGATTGTCGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTAGAGTTGATTTACAcactaaatgaatgaa--agatgGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATccttgttttattaatttctttctgaGATGTACtttttttCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGGGGTGGTGCAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGtgcatgggggctcacgcctgtaacctaaCACTTTTggatgccaaggcgggtgcatcCCTTGagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383355 627 + 50890351 AATGCTGGGAATGAGATGGCGAGAATTACAAGACCACTGGAGAGAAA-GAAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTATGTGTTTTATACTCGCCGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGATGTGAAAATAAGGGGGGCCCCGGTGCGTAACTGGAATCTAGAAGATTGTCGAAAAGGCAATTCACATCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATGTGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTACTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGAGGTGGTGTAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGTgcatgggggctcacacctgtaacccaacacttttggatgccaaggcgggtgcatcccttgagggtaggagcttgagaccagcctggccaacatggtgaaaccccgtgtgtactaaaaatacaaaaattagcc i chlSab2.chr6 C 0 I 37 e calJac3.chr22 45773030 3003 + 49145316 T a score=43032.000000 s hg38.chr19_GL949748v2_alt 732253 40 + 1064304 --gagcatggtggtgcatccctgtaatcccagctcctactct s panTro4.chr19 59667668 40 + 63644993 --gagcatggtggtgcatccctgtaatcccagctcctactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56586219 40 + 60714840 --gagcatggtgatgcatccctgtaatcccagctcctactct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5982 40 - 21488 --gagcatggtggtgcatccctgtaatcccagctcctactct i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 5872 37 + 40826 tggtgcat--tggcacgtgcctgtaatcccagttactag--- i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55631876 37 + 59248254 tggtgcat--tggcacgtgcctgtaatcccagttactag--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47703246 37 + 51301725 cggtgcat--tggcacatgcctgtaatcgcagttactag--- i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47383982 37 + 50890351 I a score=1342428.000000 s hg38.chr19_GL949748v2_alt 732293 654 + 1064304 ggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccgtctcaaaaaat-aaaaataagaaaTGCATAAATATAAATATAATATAACACATGCAAATGAGAAAGGGACCTGAATTCCAATCATGATTTTTCTATTTCTCTATA-ATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATACACAAAGTGCTCTGTTCATCACAAGAAAACA-TGCCCTCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCATCTGTGGAGATTCAGATAGGCCATGGGGAGGTAAATTCTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATTAGCGTCAGCAGTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAACCTAACATGTGTCTCCTGAGATCACAAAGAGTAGCACGTT s panTro4.chr19 59667708 647 + 63644993 ggaagatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactctgtcctaaaaaat-aaaaataagaaaTGC------ATAAATATAATAAAACACACATGAATGACAAAGGCGCCTGAATTCCAATCATCATTTTTCTATTTCTCTATA-ATTACTTCTTTGATCCTTTATCTCATCCGTTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCCTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATCACACAAAAAAA-TGCCCTCTCACCCAAAT-CCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGTGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATAGAAGCAATAGATGGCCGAGGAGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56586259 648 + 60714840 ggaggatgaagcaggagaatgacttcaacccaggagctggaggttgcagtgagtcgagatcgtatcactgcattccagcctggg-gacacaaggagactctgtctcaaaaact-aaaaataagaaaTTC------TTAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTCTA-ATCACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGATATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGTTCATGGCAAAAAAAACTTGCCCCCTCACCCAAATCCCCCACCTCAGCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGAAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTCGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCTGAGATCATAAAGAGTAGCACGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 6022 646 - 21488 ggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcgcatcactgaactccagcctgggtgacacaaggagactccatctcaaaaaat-aaaaaaaagaaaTGC------ATAAATATAACATAACACACACGAATGATGCAGGCACCTGAATTCCAATCATCA-TTTTCTATTTCTCTATA-ATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAACATGAGATCATGTGGAAAATATGAAAGCCCAGTGAACCCACCGGCACAGGTCCTGGTATAGAGAACGTGCTCTGTTCATGGCATAAAACT--TGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCAATCACCTGTGGATATTCAGATAGACCATGGGGAGGTAAACACTAATACTCCTTGGAGTGAGTTCAGATGTTGGAATCAGAGATCAGCGCCAGCACTAGCCCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGATGGTATGGAAGCAACAGATGGTCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTCACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 5909 647 + 40826 ggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggcgacacagggggactctgtctcaaaaaataaaaaataaaaaaTAC------ATAAATATGATATAACATACACAAATTACAAAGGCACCTGAATGCCAACCATCATTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTACCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGTTTGAGATCATACAGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAACT--TGCCCTGTCACTCAAATCCCCCACCCTACTCCTACTTCCAATCACCTGTGGAGATTCAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGCTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCACTGCCTCTCAGGTAGAACAACAGCTTAATA-ATGTCTCAGGAGATCACAAAAAGTAGCACGTT i rheMac3.chrUn_JH290802 C 0 I 30279 s macFas5.chr19 55631913 647 + 59248254 ggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggcaacacagggggactctgtctcaaaaaataaaaaataaaaaaTAC------ATAAATATGATATAACATACACAAATTACAAAGGCACCTGAATGCCAACCATCATTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGTTTGAGATCATACAGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAACT--TGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATTCAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGCTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCACTGCCTCTCAGGTAGAACAACAGCTTAATA-ATGTCTCAGGAGATCACAAAAAGTAGCACGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47703283 645 + 51301725 ggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggtgacacagggggactctgtctcaaaaaat-aaaaataaaaaatac------ataaatatgataTAAC--ACACAAATTACAAAGGCACCTGAATACCAACCATCGTTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGAGATCATATGGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAACT--TGTCCTCTCACCCAAATCCCCTACCTGACTCCTACTTCCAAGCACCTGTGGAGATACAGATAGATCATGGGAAGGTAAAAACTAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTCAGGTAGAACAACAGCTTAATATGTGTCTCAGGAGATCACAAAAAGTAGCACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47384019 646 + 50890351 ggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggcgccactgcactccagcctgggcaacacagggggactc--tctcaaaaaat-aaaaataaaaaaTAC------GTAAGTATGATATAACACACACAAATTACAAAGGCACCTGAATACCAACCATCATTTTTCTACTTCTCTGTCTTTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTTCTTATTTGGCTTTCTGTGAGCTTGAGATCATACGGAAAATGTGGAAGCCCCTTGAACCCACCAACGCAGGCTCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAACT--TGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATACAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCTAGCACTATCTCCTGATCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTTAGGTAGAACAACAGCTTAATATGTGTCTCGGGAGATCACAAAAAGTAGCACGTT i chlSab2.chr6 I 37 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=1255317.000000 s hg38.chr19_GL949748v2_alt 732947 597 + 1064304 TCACATGGGCTTCAACACTGTTTCCTGGCCATTTGACATAAGAGAATTCTACTTCGCTTTTTTT-ATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATGCCGTGGATGTAGAAATCCTAAAGCACAGTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacattacac-aggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgccttcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggtcgttgctgtcttagtttttttttttg---------------------------ttgctct--------------------------------------------------gaag s panTro4.chr19 59668355 596 + 63644993 GCACACGGGCTTCAACACTATTTCCTGGACGTTCGACATAAGAGAATTCTACTTTGCTTTTTTTAATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTGCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacattacac-aggcaggtgcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcatcccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcttag--tccatttttg---------------------------ttgctct--------------------------------------------------aaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56586907 594 + 60714840 TCACATGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTTGCTATTTTT-ATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGGAAGTTGTTTGACTCAAGAATGCTGTAGATGTAGAAATCCTAAAGCACATTTGCTGTGTATGAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCTTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacat-aggcaggttcattactaacagataagcagcgagtgacaagagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcacccgatttgcagtgtagctgggagaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctctaggaagaacaggaagacagccca-gctgttctgggacattcctcctcatctcaggacgttgctgtcttag--tccatttttg---------------------------ttgctat--------------------------------------------------aaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 6668 670 - 21488 TCACACCGCCTTCAACACTATTTCCTGGCTGTCTGACATAAGAGAATTCTACTTCGCTTCTTTT-ATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATTCTGTGGATGTAGAAACTGTAAAGCACATTCGCTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacccggggctatgccaattcctatcactcaccgtcactccagggagacagaacacacagggaatacattaaat-agacagattcattactaacagataagcagc-agtgacaacagaagcctac-tttcactgtgagccagtctctcaaggctcagaaaagctgctcgggatatatggagtcaccccatttgcagtgtagctggaagaagccagaaagcagcccagcatgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaagaataggaagacagcccaggctgttctgggacattcctcctgatctcaggacattgctgtcttag--tccattttTgggaggcggagcttgcagtgagccctgattgcgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 36835 591 + 40826 CTTCACGACCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCA-CTTTTTTGATCTTGATTTCAC--GTTATGCCTTTTCTTGTCGAATGTAATGTGTTTGAGTCAAGAGGGATGTGGCCGTAGAAATTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcactgtcactccagggaaacaaaacacacatagaatacattacataaggtgggttcattactaacacataagcagcaactgacaacagaagcctacatttcaatgtgagccagtcccccaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcactgcagctgggggaacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttgtgggacgttcctcctgatctcaggatgtt---gtcttag--tccctttttg---------------------------tggctat--------------------------------------------------aaaa i rheMac3.chrUn_JH290802 I 30279 T 30357 s macFas5.chr19 55632560 596 + 59248254 ATTCCTGGGCTGCATCATTATTTCATGGCTGTTTGATTTAAGTCAGATTTACTTCACCTTTTCTGATCTTGATTTCACTTTTTATTTCTTTTCTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctatccctcaccgtcactccagggagacagaacacacagagaatacatgacat-aggcaggttcattactaacacataagcagcaactgacaacagaagcctatatttcgatgtaagccagtcccccaaggctcagaaaagctgttcgggatatatggagtcaccccatttgcactgcagctgggggaacccacaaagcagccctgcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttag--tccctttttg---------------------------aggctat--------------------------------------------------aaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47703928 594 + 51301725 GTTCCTGGGCTGCATCATTATTTCATGGCTGtttgatttaagtggggtttacttcaccttttttgatcttgatttcactttttatttcttttcttggagaATGTAATGTGTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCGAGTCCAGTCTTCCCAGAGAAGA--CTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCCCTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACATGACAT-AGGCAGGTTCATTGCTAACAGATAACCAGCAAGTGACAACAGAAGCCTATATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGGGAACCCACAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCAGGCTGTTCTGGGACATTCCTCCTGATCTCAGGACGTTGCCGTCTTAG--TCCCTTTTTG---------------------------TGGCTAT--------------------------------------------------AAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47384665 596 + 50890351 GCTCCTGGGCTGCATCATTATTTCATGGTTGTTTGATTTAAGTCAGGTTTACTTCACCTTTTTTGATCTTGATTTCACTCTTTATTTCTTTTCTTGGAGAATGTAATTCTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGTGCATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcaccatcatttcagggagacagaacacacagagaatacatgacat-aggcaggttcattactaacagataaccagcaagtgacaacagaagcctatatttctatgtgagccagtcccccaaggctcagaaaagctgcttgggacatatggagtcaccccatttgcagtgcagctgggggaacccacaaagcagcccggcctgggttttgtaccctggagccacaggaaacactgagctaaagcactgcatgacgtcctcctctaggaagaataggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttag--tccctttttg---------------------------aggctat--------------------------------------------------aaaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=1314147.000000 s hg38.chr19_GL949748v2_alt 733544 559 + 1064304 gaacacttgagcctcggtaacttctaaagaaaagagatcggtttgcctcacagttctgcaggctgtactggaagcatggcaccagaatctatttctcgtgatggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagagagtaagggggagagggagcaatggagcttccaagctctttttaacaaccagctgtccaggaactaacagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctgaagaggcccaacctcccacaatgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataattgagaaagcaggggaaagctaggtcTCCCGCCATTTGGGTGCTTGTCCTAAAGAGACGTTGTATGTGGTTACCTGCCAATCAAGAAATGCGAGACAATTCAT s panTro4.chr19 59668951 559 + 63644993 gaacacttgagcctgggtaagttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttatcgtgatggcctcaggctgctcccactctggcagaagggaaagagggtctgtccgtgcagagaccacggagatcacacggcaaccgagggagcaaggaggagggggagcaatggagtttccaagctctttttaacaatcagctctccaggaactaatagagggggaacttgctaaccccgtttccttgaaacagcattgatctgttcatgatggatccacctccatgactcaaacacttcccaagaagcccaccctcccacactgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtggtatcctcagcacgttcgatggttactatgagagctataactgagaaagcaggaggaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGCTGTATGTGGTTACCTGTCAATCAAGAAATGCAAGACAATTCAT i panTro4.chr19 C 0 I 2202 s ponAbe2.chr19 56587501 556 + 60714840 gaacacttgagcctgggtaacttctaaagaaaagagatttgtttggctcacagttctgcaggctgcactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccacagagatca-acggcaagagagggagtaagggggagggggagcgatggagcttccaagctctttttaacaaccagctctccaggaactaatagagggggaacttgctaaccccctctccctggaacagcattgatctcttcatgatggatccacctccatgacccaaacacctcccaataggcccaacctcccacactgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgtagcctcagcacgttctatggttactatgagagctataactgagaaagtgggagaaagctaggtttcccgccatctgggtgcttgtcctAAAGAGACATTGTATGTGGTTACCTGTCAATCGAGATATGCGAGACAATTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 7338 559 - 21488 gaaCacttgagcctgggtaacttctaaagaaaagagatctgtttgcctcacagttctgcaggctgtactggaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacagggcaagagagggagcaagggggagggggagcagtggagcttccaagctctttataacaaccagctctccaggaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggattcactgccatgacccaaacacctcccaagaggcccaacctcccacaatgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtaGTTGTATCCTCAGCACTTCCTATGGTTACTATGAGAGCTATAACTGAGAAAGCAGGAGAAAGCTGGGTCTCCCACCATCTGGGTGCTTGTCCTAAAGAGACACTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCAT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 7069 557 + 40826 gaacacttgagcctgggtaacttctaaagaaatgagatttgtttgcctcacagttctgcaggctgtactagaagcatggaaccagcatctatttcttctgatggcctcaggctgctcccactctggcagaaaggaaggagggtctgtgtgtgcagagac--cagagatcacacagcaagagagggagcaaggggaagagggagcgatggagtttccaagctctttttaacaaccagctctccaggaactaatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcaggatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacactgggggttacatttcaatgtaaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacattctatggttactatgagagctataactgagagaggaggagaaagctgggtcTCCTGCTATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCAT i rheMac3.chrUn_JH290802 T 30357 C 0 s macFas5.chr19 55633156 559 + 59248254 gaacacttgagcctgggtaacttctaaagaaatgagatttgtttgcctcacagttctgcaggctgtactagaagcatggaaccagcatctatttcttctgatggcctcaggctgctcccactctggcagaaaggaaggagggtctgtgtgtgcagagaccacagagatcacacagcaagagagggagcaaggggaagagggagcgatggagcttccaagctctttttaacaaccagctctccaggaactaatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacattctatggttactatgagagctataagtgagagaggaggagaaagctgggtcTCCTGCTATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47704522 558 + 51301725 GAACACTTGAGCCTGAGTAACTTCTAAAGAAATGAGATTTGTTTgcctcatagttctgcaggctgtactaGAAGCATGGAACCAGCATCTATTTCTTCTGATGGCCTCAGGCTGCTCCCACTCTGGCAGAAAGGAAGGAGGGTCTGTGTGTGCAGAGACCACAGAGATCACActgcaagagagggagcaaggggAAGAGGGAGCGATGGAGCTTCCAAGCtctgtttaacaaccagctctccagGAACTAATAGAGGGAGAACTTGCTAACCCTGTCTCCTTGGGACAGCATTGATCTATTCACGAtggatccacctccatgacccaaacacctcccaagaGGCCCAACCTCCCACACTGGGGGTTAAATTTCAATGTGAGGTTTCAA-GGGTCAAACATCTAAACTAAAGCAGTGGTATCCTCAGCACGTTCTATGGTTCCTATGAGAGCTATAactgagagaggaggagaaagctgGGTCTCCCGCCATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47385261 559 + 50890351 gaacacttgagcctgggtaacttctaaagaaacgagatttgtttgcctcacagttctgcaggctgtactggaagcacggaaccagcatctatttcttgtgatggcctcaggctgctcccattctggcagaaaggaaggggggtctgtgtgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagcaatggagcttccaagctctttttaacaaccagctctccaggaactgatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgaccccaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacgttctatggttactatgagagctataactgagagaggaggagaaagctgggtctcccgccatctggCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATTCGAGACAATCCAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=3138935.000000 s hg38.chr19_GL949748v2_alt 734103 1366 + 1064304 AAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAA-GTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACCAGCAGGATGGTCCCTGGCCCAAGACAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGATTCCCTTCCCCTGCCTTCAGCTCACAGACCGTTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTG-AACTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTCTTTTGTTGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGCGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGACCATCAGGAGGTGTCATACGCATAATTGGATCACTGTGTTTTCACACAGAGAGAAATCACTCGCCCTTCTGAGAGGCCCAAGACACCCCCAACAGATACCAGCATGTACATAGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTTCTGTCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactagcttacttcctagt-ctacctgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacagcacttagacacgtgctgttccacc-tccct-------------------tcagactatctttcagccttctgccagcagta s panTro4.chr19 59671712 1387 + 63644993 aaaGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAAACACCTGCACGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGCTGCTCCAACAAAAAAAAGTAAGTCTCATGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGGAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTGTCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTG-AGCTCAGAGAGATAGAATGTATGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATGTTGGTATCTGCTTATGAAACGAGGAGCCTGAAGTGCCCTCTGAGCTGTTTTGATGACTTCCATCTTCTACAGATGCTGCCGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTTGCTCCAGGATTCTGTTGAACAAGACTCTCAGGAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGACGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCGTCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGTTTACAAATGTGTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTCCTTAGCCCAGAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttagacacgtgctgttccaccttccctcatgctgttccacctccactcagactatctttcagccttctgtcagcagta i panTro4.chr19 I 2202 C 0 s ponAbe2.chr19 56588057 1384 + 60714840 AAAGAGGAACTGCTATGATTACCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTAGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAA-GTAAGTCTCACGAAGCAGAGACCAGAGAGCTCAGGGCCACGTGGGGAAGCAGGATGGGTGCACGCAGGTGTGTGTTCCTCACCGGCAGGATAGTCCCTGGCCCAAAGCAGGAGCCTCAGAAGCAAGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCTTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAGTCAATGGGATGGGAACTCAGAGCTATTCATGGAATGGGTCCTTG-AGCTCAGAGTGAGAGAATGTCTGTGTCT-GCTGTTGGCAACTGAGGGACCTCGGGCACCTATGGCCTCCCCCTGCATGTTGCTATCTGCTTATGAAATGAGGATCCACAAGTGCCCTCTGAGCTGTTTTGACGACTACTGTCTTCTACAGATGCTGTTGTAATGGATCAAGAGCCTGCAGGGAACAGAACAGTGAACAGAGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACAAAGAAAAATCACTTGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCGTGTACACGGAACTTCCAAATGCTGAGCCCTGATCCAAAGTTTTCTCCCGCCCATGAGCACCACAGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGTCTTGTCTCAAAACCGGGTTGCCAGCTCCAATGTACCAGCAGCTGGAATCTGAAGACATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAA-GTCCCCACTGCCTGCTGGAGAGAAAACACACT-GTTTGCTTAGCCCACAATTCTCTATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcgatcacactgaggaactcacaattccaaacatacaagagggtccctcttaacacggcacttacacacgtgctgttccaccttccctcatgctgttccacctttcctcAGACTATCTTTCAGCCTTCTGTTGGCAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 7897 1382 - 21488 AAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAATGGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGCAGCAGAGGCCAGACAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCAGATGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGAAGGAGC--CAGAGGCAGGGCTTTGTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAAGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTG-AGCTCAGAGAGATAGAATGTCTGAGTCA-GCTGCTGGCAACTGAGGGACCTCAGGCACCTACGGCCTCCCCC-GTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCTGAGCTGTCTTGATGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTGCCCCTCAGCCCAGCCTCATGGATACAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCACTGCGTTTTCACACAGAGAAGAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCATGTACACGGAGCTTCCAGATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCAGCACAGTCAGGCCTTGAGGGGGTCCTCTAGGGAGACAGCAGCCCTGTCTCAAACCCGGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACAAATCTG---GTGTCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCCCTtgacctgtgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcgatcacactgaggaactcacaactccaaacacacaagaggctccttcttaacacagcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCC-TCTGTCAGCAGTA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 7626 1384 + 40826 AGAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGTGTCCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGCCCCGTGGGGAAGCGGGATGGAAGCACGCAGGTGTGTGTTTCTCACTGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACCCCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCCGATTCTCAACTGTATCCTCATGTCCC-GGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGAGTCCTTGCAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATCTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTCTCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAAGCCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACACAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACATAGAACTTCCAAATGCTGAGCCCAGATC----ATTGTCTCCTGCCCGTGAGCACCAGAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACCAGCAGCAGGAATCTGAAGGCGCGACTCTGCATCTTAGGACATCGCTCCTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCACTTCACTTGACCCCAGCCCACATCTCCAACCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACCAAGGAACTCACAATTCCAAACAGACGAGAGGCTCCCTCTTAACACGGCACTTAGACACGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCC-TCTGTCAGCAGTG i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55633715 1384 + 59248254 AGAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTGGGGAAGTGGGATGGGAGCACGCAGGTGTGTGTTTCTCACTGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGAGTCCTTG-AGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATCTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAAGCCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACACAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACATAGAGCTTCCAAATGCTGAGCCCAGATC----ATTGTCTCCTGCCCGTGAGCACCAGAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCActtcacttgatccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcgatcacactgaggaactcacaattccaaatatacgagaggctccctcttaacacggcacttagacatgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAGCAGTA i macFas5.chr19 C 0 I 1893 s papAnu2.chr19 47705080 1383 + 51301725 AAGGAGGAACCGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGTGTCCTCAGTGGTTATGATCCCCTTCAccatcctcctcttctttctcctgcatCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGAAGGAGAGGCCAGAGACCTCAGGGCCTTGTGGGGAAGTGGGATGGGAGCACGCAGATGTGTGTTTCTCACTGGCAGGATGGTCTCGGGCCCAAGGCAGGAGCCACAGAGGCAGGGATTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCCCAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGCTCTTCATGGGATGGGTCCTTT-AGCTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACAGTCTCCCGCTGTGTGTTGGGCTCTGCTCATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAACCCTCTCCCTCACTCAACATTTCCCTCTCTGCAGGACTCTGATGAACCAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACTCAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACACGGAGCTTCCACATGCTGAGCCCAGATC----ATTGTCTCCTGCCCATGAGCACCACAGACAGGCCTGGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGGTTGCTGGTTCCAATGTACCAGCAGCAGGAATCTGAAGGCGCGACTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCCCACTGCCTGCTGGAAAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCACTTCCCTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAGTTCCAAACATACGAGAGGCTCCCTCTTAACACAGCACTT-GACAGGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47385820 1384 + 50890351 AAGGAGGAACTGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCCCCAGGTAACCCCAGACACTCGCATGTTCTGATTGTGTCCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAAAAAAAAGA-GTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGCCCTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATCGGATGAGTCCTTG-AGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCC-CTGTATCTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCTTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGTCTCGTGG--ATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAACCCCCTCCCTCACT-AACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTTCCAAATGCTGAATCCAGATCGAAAGTTGTCTTCTACCCATGAGCACCACCGTCAGGCCTTGCAGGGGTCTTCTATGGAGACAACAGTCCTGTCTCAAAACTGGCTTGACAGCTCCAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacaattccaaacatacaagagactccctcttaacacagcacttagacatgtgctgttccaccttccctcatgttgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAGCAGTA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=364881.000000 s hg38.chr19_GL949748v2_alt 735469 170 + 1064304 aaacttataaa-ttttttaaataatttcaatgtagttttcccgccttcaaataaacatgtctgccctcatggtttcggtaacgagactcttctcttgcctaaggcttccggtgttatcattaccatgtccacataaccccatctgttctccattgggttctcagccctgga s panTro4.chr19 59673099 171 + 63644993 aaacttataaatttttttgaataatttcaatgtagttttccctccttcaaataaacatgtctgtcctcatggtttcggtaatgggactctatttttgcctacgacttctggtgttatcattaccatgtccacataagcccatatgttctccactgggttctcacccctaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56589441 171 + 60714840 AAACttataaattttttttaataatttCAATGTAGTTTTCCCTCCTTCAAATAAACATGGCTGCCCTCATGGTTTCGGTAATGGGAATCTTTTCTTGCCTAAGGCTTCCGGTGTTATCAGTACCATGTCCATATTACCCCATCTGTTCTCCATTGGGTTCTCACCCCTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 9279 171 - 21488 AAACTTATAAATTTTTTTTAATAATTTCTATGTAGTTTTCCCTCCTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATTATTACTATGTCCATATAACCCCATCTGTTCTCCACTAGGTTCTCACCCCTGGA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 9010 171 + 40826 AAACttataaatttttaaaaataatttCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGGTTTCAGTAATGTGACTCTTTTCTTGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i rheMac3.chrUn_JH290802 C 0 I 197 s macFas5.chr19 55636992 171 + 59248254 AAACTTATAAATTTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGGTTTCAGTAATGTGACTCTTTTCTTGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i macFas5.chr19 I 1893 C 0 s papAnu2.chr19 47706463 171 + 51301725 AaacttataaatttttaaaaataatttcaatggaGTTTTCTCTTCTTCAAATAAACATGTCTGCCCTCATCCTTTAGGTAATGTGACTCTCTTTTGGCTGAAAGAAACCGGTGTTATCATTACTATGTCCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387204 171 + 50890351 AAACTTATAAATTTTTAAAAATAATTTCAATGTAGTTACCTCTTCTTCAAATAAACATGTCTATCCTCATGGTTTCAGTAATGTGACTCTTTTCTTGCTGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATATGTTCTCCACTGGATTCTCACCCCTAGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=69293.000000 s hg38.chr19_GL949748v2_alt 735639 43 + 1064304 ctctgagcttctggaagcagaatggagcctgaattgtctctgA s panTro4.chr19 59673270 43 + 63644993 ctctgagcttctgtaagcagagtggagcctcatttgtctctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56589612 43 + 60714840 CTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTTTCTTCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 9450 43 - 21488 CTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTTTTCTCTGA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55637163 42 + 59248254 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47706634 42 + 51301725 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTTTCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387375 42 + 50890351 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chrUn_JH290802 9181 197 + 40826 I a score=853662.000000 s hg38.chr19_GL949748v2_alt 735682 398 + 1064304 GACTCCAATTTCCATCCAAAGATACAGCACATAGGAGGCTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGG-ACACATATCAACATATCATCTTTCATAATATAAATATAcagtcggtcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatattttgag--aaaaaaatccccgaagtttc-aagaagcaaaaaactatgttgaatcgacacaaattgagt--ggcgtgtaggctgtgtcaggaattataagtaatcaag-agatgatttcatgtatacaggaggatg s panTro4.chr19 59673313 395 + 63644993 gactccaatttccatccaaagatgcagcacataggaggtTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTACAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGG-ACACATATCAACATATCATCTTTCATACTATAATTATAcagtcactcctccatatctgtgggatttacaggtctttattgaaccaagtataaatcaaaaatattcagag---aaaatatccacaaactttc-aaaaagc--aagactgtgttgaatggacacaaatgaggc--agtgtgtaggctgtatcaagaattataagtaaccaag-agatgattttatgtatacaggaggatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56589655 398 + 60714840 GACTCCAATTTCCATCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCATGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGCAGAGTCACAGGTCTTGTTAGTCTCATCTCCACGGGATACACATATCAACACATCATCTTTCATACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatgttttgag--aaaaaaatcccccaagtttc-aa-aagcaaaaaactatgttgaatcgatacaaatcgagt--ggcgtgtaggctgcgtcaggaattataagtaatcaag-agatgatttcatgtatacaggaggatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 9493 399 - 21488 GACTCCAATTTCCTTCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACCATGAAACATTTGTAGAGTCACAGGCCTTGTTAGTCtcatctccacgggg-acacatatcaacacatcatctttcatactagaaatatacagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatattttgag--aaaaaaatccctgaagtttc-gaaaagcgaaaaactatgttgaatcgacacaaattgagt--ggtgtgtaggctgtgtcaggaagtataagtaatcaagaagatgatttcatgtatacaggaggatg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 9378 394 + 40826 GACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATGTGTAGAGTCATAGGCCTTGTTAGTGTCATCTCCATGGGG-acacatgtccacacatcatctttcataccataaatacacagtcgctcctctagatctgtggggtttacaggtgtttattaaaccaactataaatcaaaaatattcagag---aaaaaatccacaaaatttcaaa-aagc--aaaactatgttgaatggacacaaatggaat--ggtgtgtaggctgtgtcaggaattataagtaatctag-agatgatttcatgtatacaggaggatg i rheMac3.chrUn_JH290802 I 197 I 862 s macFas5.chr19 55637205 392 + 59248254 GACTCCAATTTCCGTCCAAAGATGCAGCTCATGGGAGGATCCAGGGATCGTGAATCAGATGAACAAGTGATATTCTTACCCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATGTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGG-acacatgtcaacacatcatctttcataccataaatacacagtcgctcctctagatctgtggggtttacaggtgtttattaaaccaactataaatcaaaaatattcagag---aaaatat--acaaagtttc-aa-aagc--aaaactatgttgaatggacacaaatggagt--ggtatgtatgctttgtcaggaattataaataatctag-agatgatttcatgtatacatgagggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47706676 401 + 51301725 GACTCCAATTTCCGTCCACAGATGCAGCGCATAGGAGGTTTCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATGTCCACGGGG-ACACATGTCCACACATCATCTTTCATACCATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTATTGAACCaactataaaccaaaaatattttgagaaaaaaaaatccccgaagttcc-aa-aaccaaaaaaccatgTTGAATGAACACAAATGGAGTGGGGTGTGTAGGCTGTGTCAGGAattataagtaatccag-agatgatttCATGTATGCAGGAGGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387417 397 + 50890351 GACTCCAATTTCCATCCACAGATGCAGCTCATAGGAGGTTGCAAGGATCGTGAATCAGAGGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTTCAAGATGACACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCtccacaggg-acacatgtccacacatcatc-ttcatactataaatacacagtcgcttctccagacctgtggggtttacaggtgtttattgaaccaactataaatcaaaaacattttgag-aaaaaaaatccccgaagttca-aa-aaccaaaaaaccatgttgaatggacacaaatggagt--ggggtgtaggctgtgtcaggaattataagtaatccag-agatgatttcatgtatacaggaggatg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=20055.000000 s hg38.chr19_GL949748v2_alt 736080 10 + 1064304 tgcatgggtt s panTro4.chr19 59673708 10 + 63644993 tgcatgggtt i panTro4.chr19 C 0 T 18078 s ponAbe2.chr19 56590053 10 + 60714840 tgcatgggtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 9892 10 - 21488 tgcatgggtt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55637597 10 + 59248254 tgcatgggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47707077 10 + 51301725 TGCATGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387814 10 + 50890351 tgcatgggtt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chrUn_JH290802 9772 862 + 40826 I a score=692115.000000 s hg38.chr19_GL949748v2_alt 736090 451 + 1064304 ctatgcaattgctatgcta-----------------------ttttttttttttgagacag--tctcactctctcacccaggctggagtgcagtggcgtgatctcaactcactgcaacctccgcctcccaggttcaagcgattgtcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaattttt-----ttgtgtgtgtatttttagtagagacggggtttcagaatgttggaccagctggtcttgaactcctgaccttgtgatctacccagctcagcctcccaaagtgctgggattacgggcgtgagccacggtgcccagcttcactatgccatttcatgcaaggggcttgagcatctgcagattttggtatctgaatggggatcctggaaccaatcacccaggtatagtgaaggacCATGGTATATAATTTTTATTTGTCAATCTTAA s panTro4.chr19 59655640 454 + 63644993 ctatgcaattgctatgctatt--------------------tttttttttttttgagacag--tctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagcgattctcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaattttt-----gtgtgtgtgtatttttagtagagatggggtttcagaatgttggacgggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcatgagccacggtgcccagcttcactatgccatttcatgcaagaggcttgagcatctgcagattttggtatctgaatggggatcctggaaccaatcacccaggagtagtgaaggaccacGGTATATAATTTTTATTTGTCAATCTTAA i panTro4.chr19 T 18078 C 0 s ponAbe2.chr19 56590063 454 + 60714840 atatgcaattgctaggctttttgt---------------tgttgttgttgttttgagacag--tctcagtctctcacccaggctggagtgcagtggcgcgatctcagctcactgcagcctccccctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctaggattacaggcatgtgccaccatgcacagataaattttt-----tt---tat-tatttttagtagagatgggctttcagaatattggaccggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattccaggcgtgagccagggcgcccagcttcactatgccatttcatgcaagaggcttgagcatctgcagattttgatatctgaatggggatcctggaaccaatcacccaggaatagtgaaggaccactgTATATAATTTTTTTTTGT-AATCTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 9902 448 - 21488 atatgcaattgctatgcta------------------------tttttttttttgagacag--tatcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctacgattacaggcacgtgccaccatgcacagataaattttt-----tt--ttttgtatttttagtagagacggggtttcagaatgttggaccagctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcgtgagccacggcgcccagcttcactaggccatttcctgcaagaggcttcagcatctgcagactttggtatctgaatggggatcctggaaccaatcacccaggaatagtgaagaaccactgtatataatttttatttgtcaatcttaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55637607 469 + 59248254 atatgcaattgctatgccttttttgttttgttttgttttgttttgtttgtttgttttTcggagtctcactctctcacccaggctggagtgcagtggcacgatctcagctcactgcaacttctgcctcccaggttcaagtgattctcttgcctcagcctccccagtag------ctaggattacaggcacgtgccaccatgcacagataaattttttttcgtt------gtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttggaattacaggcgcgagccaccacgcccagcttcactgtgccatttcatgcaagaggcttgagcatctgcagattttggcatctgaatggggatcctggaaccaatcacccaggaatagtgaaggactactgtatataatttttatttgccaattttaa i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47707087 435 + 51301725 ATAGGCAATTagtatgtttttttt-----------------------------tgagacagaatctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccaggttctagcgattcttttgcctcaacctccccagtag------caaggattacaggcatgtgccaccatgcgcagataatctttt-----tt------gtatttttagtagagatgaggtttcagtatgttagacaggctggtttcgaactcctgacctagtgatccacccaactcagcctcacagagtgctgggattacaggggtgagccaccacgcccagcttcacTGTGACATTTCACGCAAGAggcttgagcatctgcagattttggtctCTGAatggggatcctggaaccaatcacCCAGGAATAGTAAAGGACAACTGCATATAATTCTTAtttgccaattttaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387824 451 + 50890351 atatgcaattaggatgcccttttt-------------ttttttttttttttttaaagacagaatctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattcttttgcctcagcctccccagtag------ctaggattacaggcatgtgccaccatgcacagataatctttt-----tt------gtatttttagtagagacgtggtttccgtatgttggacaagctggtctcgaactcctgacctcgtgatccacccaactcagcctcacagagtgctgggattacaggcatgagccactgcgcccagcttcactgtgccatttcatgcaagaggcttgaggatctgcagattttggcctctgaatggggatcctggaaccaatcacccaggaatagtgaaggacgactgtatataattcttatttgtcaattttaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chrUn_JH290802 9772 862 + 40826 I a score=972768.000000 s hg38.chr19_GL949748v2_alt 736541 441 + 1064304 AAATAAAGCATAAAAAATTTACAACAACAAGATAAAAAATAAGAAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataaagggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaaccccttaaaatttggtaacctgagtcctctgatttgttattATAGGTTATTTAGtttgc--------------ttttttttttttcttgagacagactcttcctctgtcacccaagctggagttcagtggcttgagctcagctcactgcaacctccgcctcccaggttcaagctattct s panTro4.chr19 59656094 450 + 63644993 AAATAAAGCCTAAAAAATTTACAACAACAAGATAAAAATTAAGAAGCGTTTTTAAAgtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataaagggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttacagaaccccttaaaatttggtaacctcagtcctctgatttgttattATAGGTTATTTAGtttgc-----tttttttttttttttttttttcttgagacacactcttcctctgtcacccaagctggagttcagtggctcgagctcagctcaatgcaacctccgcctcccaggttcaagcagttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590517 443 + 60714840 AAATAAAGCATAAAAAAAGTACAACAAGAAGATAAAAA-TAAGGAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttattttttgagaaaatattctattccaccttcaactacatggcagcctttgtcaactataaagggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcactttatgtaaccttatagaaccccttaaaatttggtaacctgagtcctctgatttgttattATAGGTTATTTAGtttgc-----------tttttttttttttttcttgagacagactcttcctctgtcacccaagctggagttcagttgctcgagctcagctcactgcaacctccgcctcccaggttcaagccattct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 10350 440 - 21488 aaataaaGCATAAAAAATTTACAACAACAAGATAAAAAATAAGAAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattcctccttaaactacatggcagcctttgtcaactataaagggactgtgtatccacggatgtattttagacacagttttctgcccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaacctcttaaaatttggtaacctgagtcctctgatttgttattATAAGTTATTTAGtttgc---------------tttttttttttcttgagacagactcttcctctgtcacccaacctggagttcagtggcttgagctcagctcagggcaacctccgcctcccaggttcaagcaattct i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 10634 449 + 40826 aaataaaGCATAAAAAATGTATAACAACAAGATAAAATATAAGAAGTGTTTTtataatgtgaggataagttcagatttattttttcctacttgtaaccctgtggtcctgtgttatttgttgagaaaatattctattccaccttaaaccacatggcagcctttgtcaactataaaggagctgtgtgtccacggatgtattttagacacaattttctgccccgtggttctctgtatcccctctcatgaggatgctgtactttatataaccttggagaaccccttaaaatgtggtaacctgagtcctctg-tttgttgttATAGGTTATTTAGtttcc-----ttttttttttttactttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggtacgagctcagctcactgcaacctccgcctcccagattcaagcacttct i rheMac3.chrUn_JH290802 I 862 C 0 s macFas5.chr19 55638390 452 + 59248254 aaataaaGCATAAAAAATGTATAACAACAAGATAAAATATAAGAAGTGTTTTtataatgtgaggataagttcagatttattttttcctacttgtaaccctgtggtcctgtgttatttgttgagaaaatattctattccaccttaaaccacatggcagcctttgtcaactataaaggagctgtgtgtccacggatgtattttagacacaattttctgccccgtggttctctgtatcccctctcatgaggatgctgtactttatataaccttggagaaccccttaaaatgtggtaacctgagtcctctg-tttgttgttATAGGTTATTTAGTTTCC--ttttttttttttttttctttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggtacgagctcagctcactgcaacctccgcctcccagattcaagcacttct i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47707522 441 + 51301725 aaataaagcataaaaaatttacaacaggaaaataaaaaataagaagtgttTTTATAGTGTGAGGATAAGTTTAGATTGATTTTTTCCTACGTGTAACCCTATGGCCCTGTGTTATTTGTTGAGA----ATTCTATTCCACCTTAAATCACATGGCAGCCTGGGTCAACTGTAAAGGGACTGTGCATCCATGGGTGTATTTTAGACAGTCTTTTCTGCCCAGTGGCTCTCTGTATCCCCTCTGATGAGGATGCTACACTTCATGTAACCTTATAGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGATTTGTTATTATAGgttatttagtttgc-----ttttttttttttt-----ttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcctcccaggttcaagcaattct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388275 434 + 50890351 aaataaAGCATAAACAATTTACAACAATAAAATAAAAAATGAGAAGTGTTTTTATAGTGTGAGGATAA-TTTAGA----------------TGTAAGCCTGTGGCCCTGTGTTATTCGTTGAGA----ATTTTATTCCACCTTAAACCACATGGCAGCCTGTGTCAACTGTAAAGGGACTGTGCATCCACGGGTGTATTTTAGACACTCTTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTGATGAGGATGCTACACTTTATGTAACCTTATACAACCCCTTAAAATTTGGTAACCTAAGCCCTCTGATTTGTTATTATAGGTTACTTAGTTTGCtttttttttttttttttttttttttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcatcccaggttcaagcaattct i chlSab2.chr6 C 0 I 472 e calJac3.chr22 45773030 3003 + 49145316 T a score=7921.000000 s hg38.chr19_GL949748v2_alt 736982 6 + 1064304 gatgcc s panTro4.chr19 59656544 6 + 63644993 cgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590960 6 + 60714840 cgtgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 10790 6 - 21488 cgtgcc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11083 6 + 40826 tgtgtc i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55638842 6 + 59248254 tgtgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47707963 6 + 51301725 cgtgcc i papAnu2.chr19 C 0 I 398 e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47388709 472 + 50890351 I a score=105371.000000 s hg38.chr19_GL949748v2_alt 736988 48 + 1064304 tcTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTCTT s panTro4.chr19 59656550 48 + 63644993 tcTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTTTT i panTro4.chr19 C 0 I 18150 s ponAbe2.chr19 56590966 48 + 60714840 tcTGGTTTAGTACTAGAAACTCAAACAGGAAAATTAGAATGGCTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 10796 48 - 21488 tcTGGTTTAGTACTAGACACTGAAGCAGGAAAATTAGAATGGCTTTTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11089 48 + 40826 ACTGGTTTAGTACAAGAAACTCAAGCAGGAAAATTAGAATGACTTTTT i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55638848 48 + 59248254 ACTGGTTTAGTACAAGAAACTCAAGCAGGAAAATTAGAATGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47708367 48 + 51301725 TCTGGGTTAGTACTAgaaattcaagaaggaaaattaGACTGACTTTTT i papAnu2.chr19 I 398 C 0 s chlSab2.chr6 47389181 48 + 50890351 TCTGGTTTAGTACTAGAAATTCAAGAAGGAAGATTAGACTGACTTTTT i chlSab2.chr6 I 472 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=695688.000000 s hg38.chr19_GL949748v2_alt 737036 349 + 1064304 GTCACAATTACTCTGATAATGTTAATAATA------------------CC------------------TGTTAGACATTTTGCACATTACATATGAAGAAGAGTTTGAATCTCAGATAAAAACAA---AAATACATCAAAAATCTTTAATGTAAGCACAGAATTCAATCATCTCGTGTATGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGGTCGT--------------------AGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACAT s panTro4.chr19 59674748 351 + 63644993 GTCACAATGACTCTGAAAACATTAATAATA------------------CC------------------TATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACGTGAAAACTCTTTCATGTTATCACAGATTTTAGGCATCTCATGTTTGGGAGGTTGGATCTGAGACATGCTTTGAGT-TGGTCAT--------------------AGTGAAGGACACTAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACAT i panTro4.chr19 I 18150 C 0 s ponAbe2.chr19 56591014 369 + 60714840 GTCACAATTACTCTGATAATGTTAATAATA------------------CC------------------TGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCCGATAAAAACAC---AAATACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCATCTGGTGTGTGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGATCATAGTGAACAATGCAAGGTGGCAGTGAACGATGCAAGATGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAAAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGGAAACTGCATGGGCAGGGCGCCAAATAACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 10844 349 - 21488 GTCACAATTCCTCTGATAATGCTAATAATA------------------CC------------------TCTTAGATATCTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAA---AAATACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCATCTTGTGTATGAGAGGTTGGCTCTGAGACGTCTTTTGAGTCTGGTCAT--------------------AGTGAATGACGCAAGGTGGCAATCGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACATCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAGATAACAT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11137 374 + 40826 GTCACAATTGTTCTGATAATGTTAATAATACTTgagcgagactccgtctc---aaaaaaaaaaaTACTTGTTAGATATTTTGCATATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAGTACATCAAAAGTCTTTAATGTAACC-CAGAATTCAATCATCTTGTGTTCAAAAGATTGGATCTGAGACGTGTTTTGAGC-TGGTCAT--------------------AGTGAATGACGCAAGGTG---------GTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCATCATGTAACGTAGAAACAGCCTGCATACGTCACCCTCCCATGATGTGGTCGGCATGTCAACTGCATGGGCAGAGCGCCACATAACAT i rheMac3.chrUn_JH290802 C 0 I 3 s macFas5.chr19 55638896 373 + 59248254 GTCACAATTGTTCTGATAATGTTAATAATACTTgagcgagactccgtctcaaaaaaaaaaaaaaTACTTGTTAGATATTTTGCATATTACACAT---GAAGAGTTTGAATCTCAGATAAAAACAACAAAAGTACATCAAAAGTCTTTAATGTAACC-CAGAATTCAATCATCTTGTGTTC-GAAGATTGGATCTGAGACGTGTTTTGAGC-TGGTCAT--------------------AGTGAATGACGCAAGGTG---------GTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCATCATGTAACGTAGAAACAGCCTGCATACGTCACCCTCCCATGATGTGGTCGGCATGTCAACTGCATGGGCAGAGCGCCACATAACAT i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47708415 350 + 51301725 GTCACAATTACTCTGATAATGTTAATAGTA------------------TC------------------TGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTgaatctcagataaaaacaacaaaaatacatcaAGAGTCTTTAATGTAACC-CAGAATTCCATCATCTTGTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAGC-TGGTCAT--------------------AGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTAGAGGCCCGCTGGGCGTCATGCAAGGTACGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTCAACTGCACAGGCAGGGCGCCAGATAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389229 350 + 50890351 GTCGCAATTACTCTGATAATGTTAATAGTA------------------TC------------------TGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAACC-CAGAATTCCATCATCTTGTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAGC-TGGTCAT--------------------AGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCGTCATGCAAGGTAGGAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T a score=170411.000000 s hg38.chr19_GL949748v2_alt 737385 137 + 1064304 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGATGGAGATC s panTro4.chr19 59675099 137 + 63644993 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGTGCGGGAATGGAGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591383 137 + 60714840 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGAGAGGGAGTGAGGGGATGGAGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11193 137 - 21488 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACGGCACCATGTCGCTTATGGTCGTCAGTATGGCATGTGTTGGTGAGTCCTGGAAGGGAATCGACGGAGGGAGTGCGGGGATGGGGATC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47708765 136 + 51301725 CCTGTGCACTGCTGAACTGAGCTGGGGCACGGCCGCCTGTCTGCACCAGCAGCACCATGTCGCTCATGGTCATCAGTGTGGCGTGTGTTGGTGAGTCCTGGAAGGGAATTCATGGAGGGAGCACTGGG-TGGAGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389579 136 + 50890351 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGCCGCTCATGGTCATCAGCGTGGCGTGTGTTGGTGAGTCCTGGAAGGGAATTCACAGAGGGAGCGCTGAG-TGGAGATC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=30935.000000 s hg38.chr19_GL949748v2_alt 737522 111 + 1064304 GGGGCCCAGAGTTGGAGATATAGGCCTGGAAGTGGAGTTATGGGCCTAGAGATGGAGTGATGGGCCTAGAAGTGGAGATCTGGGCCTGGA------------------------------------------------------------------------------GTGGAGATATGGGCCTGGAGG s panTro4.chr19 59675236 110 + 63644993 TGGGCCCAGAGGTGGAGATCTGGGCCTGGA-GTGGATTTATGGGCCTAGAGATGGAGTGATGGGCCTAGAAGTGGATATCTGGGCCTGGA------------------------------------------------------------------------------GTGGAGATAGGAATCTGGAAG i panTro4.chr19 C 0 I 27787 s ponAbe2.chr19 56591520 107 + 60714840 TCAGCCTAGAGGTAAAGATATGGGCCTGGA-GTGGAGATATGGGTCT-GATGTGGAGAAATGGGCCT-GGAGTGGAGATATGGGCCTGGA------------------------------------------------------------------------------GAGGAGATACAGGCCTGGAG- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47708901 188 + 51301725 TGGGCCCGGAGGTGGAGATATGGGCCTAGAGGTGAAGATACGGGTCTAGAGGTGGCGttatgggcct-ggagtggagatctgGGCCTAGAGGTGGAGATACAGGTCTAGAGATGGAGttatgggcctggagtggagatctgGGCCTTGAGTGGAGATAtgagcctggagtggagatatgggtCTAGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389715 51 + 50890351 TGGGCCC-------------------------------------------------------------GGAGTTGAGATATGGGCCTAGAG-----------------------------------------------------------------------------GTGGAGATATGGGCCTAGAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=25203.000000 s hg38.chr19_GL949748v2_alt 737633 54 + 1064304 TTGAGATATGGGCCTGCAG-TAGAGATATGGGCTTGTAG-TGGAGACATGGGCCTG s panTro4.chr19 59703133 55 + 63644993 TGGAGATATGGGCCTAGAG-TGGAGATATGAGCCTGGAGATGGAGATATGGGCCTG i panTro4.chr19 I 27787 C 0 s ponAbe2.chr19 56591627 54 + 60714840 TGGAGATACAGGCCTGGAG-TGGAGATATGGGCTTGGGG-TGGGGATATGGGCCTG i ponAbe2.chr19 C 0 I 11222 s papAnu2.chr19 47709089 55 + 51301725 TGGAGATATGGGTCTACAGATGGAGttatgggcctggag-tggagatctgggcctg i papAnu2.chr19 C 0 I 599 s chlSab2.chr6 47389766 36 + 50890351 TGGAGATATGGGTCTAGAGGTGGAGATATGGGCCTA-------------------- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=7235.000000 s hg38.chr19_GL949748v2_alt 737687 12 + 1064304 GAGATGGAGATA s panTro4.chr19 59703188 11 + 63644993 GAG-TGGATATA i panTro4.chr19 C 0 T 46115 s ponAbe2.chr19 56602903 12 + 60714840 GAGGTGGAGTTA i ponAbe2.chr19 I 11222 C 0 s papAnu2.chr19 47709743 12 + 51301725 GAGGTGGAGATA i papAnu2.chr19 I 599 C 0 s chlSab2.chr6 47389802 12 + 50890351 GAGGTGGAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=30274.000000 s hg38.chr19_GL949748v2_alt 737699 33 + 1064304 TGGGCCTGGAGATGGAGATATGGGCCTGCAGTA s panTro4.chr19 59657084 33 + 63644993 TCGGCCTAGAGGTAAAGATCTGGGCCTGGAGTG i panTro4.chr19 T 46115 I 18230 s ponAbe2.chr19 56602915 33 + 60714840 TGGGCCTGGAAGTGGAGTTATGGGCCTGAAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11330 33 - 21488 TCATCCTGGAGGTAAAGATATGGGCCTGGAGGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47709755 33 + 51301725 TAGGTCTAGAGGTGGAGttatgggcctggagtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389814 32 + 50890351 TGGGCCTGGA-GTGGAGATATGGGCCTGGAGTG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=62418.000000 s hg38.chr19_GL949748v2_alt 737732 63 + 1064304 GAGATAGGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGAAGTGGAGATA s panTro4.chr19 59675347 63 + 63644993 GAGATAGGAGCCTGGACTGGAGATATTGGCCTGGGGTGGACATATGAGACTGGAGTGGAGACA i panTro4.chr19 I 18230 C 0 s ponAbe2.chr19 56602948 63 + 60714840 GAGATCTGGGCCTGGAGTGGAGATATGATCCTGGAGTGGAGGTATGGGCCTGGGGTGGAGATA i ponAbe2.chr19 C 0 I 7279 s nomLeu3.chr10_GL398297_2_random 11363 62 - 21488 GAGATCTGGGTCTGATGTGGAGATATGGGACTGGAGT-GAGTTCTGGGCCTGAAGTGGAGATG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47709788 63 + 51301725 gagatctgggcctggagtggagatatggtCCTGGAGTGGAGATCtcagcctggagtggagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389846 63 + 50890351 GAGATCTGGGCCTGGAGTGGAGATCTGGGCCTGGAGTGGAGATATGGGCCCGGAGTTGAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=35125.000000 s hg38.chr19_GL949748v2_alt 737795 31 + 1064304 TGGGCCTGGAGGTGGAGATATGGGCCTGGAG s panTro4.chr19 59675410 31 + 63644993 TGGGCCTGGAGGTGGAGATATGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610290 31 + 60714840 TGGGCCCAGAGGTGGAGATATAGGCCTGGAG i ponAbe2.chr19 I 7279 C 0 s nomLeu3.chr10_GL398297_2_random 11425 31 - 21488 TGGGACAGGAAGTGTTGATCTGGGCCTGGAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47709851 31 + 51301725 tgggtCTAGAGGTGGAGATATGGGCCTAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389909 31 + 50890351 TGGGCCTAGAGGTGGAGATATGGGCCTAGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=2721.000000 s hg38.chr19_GL949748v2_alt 737826 7 + 1064304 GTGGAGA s panTro4.chr19 59675441 7 + 63644993 GTGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610321 7 + 60714840 GTGGACT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47709882 7 + 51301725 GTGGAGA i papAnu2.chr19 C 0 I 476 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e chlSab2.chr6 47389940 0 + 50890351 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=146800.000000 s hg38.chr19_GL949748v2_alt 737833 255 + 1064304 TATGGGCCTGG--------------------AGTGGAGATATGGGTCTGGA-------------------------------------GGTGGAGATACGGGCCTGCAGTAGAGATATGGGCCTGGAGTGGAGATATGGGCCAGGAG-TG----------------------------------------------------------------------GAGTTATGGGCCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGGGCCTAGG-AAGGAGATATGGGCCTGGGTGTGGAGATATGGGACTGGAGAGGTGATATGGGCCTGGAGTGGAGATATGGGCTTAG-GGTGGAGTTCTGGGCCTGGG-GCGGAGATATGG s panTro4.chr19 59675448 275 + 63644993 TATGGGCCTGGAGGTGGAGTTACGGGCCTCTAGTAGACATACGGGCCTGGA-------------------------------------G-TGGAGACATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGGTG----------------------------------------------------------------------GAGATATGGGCCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGGGCCTAGG-ATGGAGATATGGGCCTGGGTGTGGAGATATGGGACTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGG-GGTGGATATCTGGGCCTGGG-TTGGAGATAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610328 254 + 60714840 GATGGGCCTGG--------------------AGTGGAGATCTGGGCCTGGA-------------------------------------G-TGGTGTTACCGGCCTGCAGTAGAGATATGGGCCTGGAGTGCAGATATGGGCCAGGAG-TG----------------------------------------------------------------------GAGATGTGGGTCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGGACCTAGG-ATGGAGATATGGCTCTGGCTGGGGAGATATGGGACTGGAGTAGAGATATGGGCCTGAAGTGGAGATATGGGCTTGG-GGTGGAGATCTGGGCCTGGG-GTGGAGATATGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710365 362 + 51301725 tatgggcctgg--------------------agtggagatatgggcctggagtGATGAcgtgggcctggagtggagataagggcctggggtggagatatgggcctagagtggagatatgggcctggagtggagatttgggcctggag-tggagatatgggccaGTGGAGATATGGGTCTGGCATGGAGATCTGGGCCAGGAGTGGAGATCTGGGCCACTAGAGATATGGGTCTAGAGGTGGAGttatgggcctggagtggagatatgggcctggg-gtggagatatgggcct-gggatGGAAATATGGGCCTAGAGTGGAGATCTGGGCCAGGAGGGGAGATATGGGTCTAGAGgtggagttatgggcctgga-gtggagatatgg i papAnu2.chr19 I 476 C 0 s chlSab2.chr6 47389940 228 + 50890351 --------------------------------GTGGAGATATGGGTCTAGA-------------------------------------GGTGGAGGTATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATCTGGGCCTGGAG-TG----------------------------------------------------------------------GAGATATGGGTCTAGAGGTGGAGATATGGGCCTGAAGTGGAGATATGGGCCTAGACGTGGAGATAAGGGCCTAGAGGtggagatatgggtctagag------------------gtggagatatgggcctagaggtggaggtatgggtctagaggtggaggtatgg i chlSab2.chr6 C 0 I 58188 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=35521.000000 s hg38.chr19_GL949748v2_alt 738088 55 + 1064304 GACTGGATTGGAGATAGGGGCCTAGGGTGGAGATCTGAGCCTGGATTGG-------------------CGATAT s panTro4.chr19 59675723 74 + 63644993 GCCTGGATTGGAGATATGGGCCTAGGGTGGAGATCTGAGCCTGGATTGGAGATACGGGCGTAGATTGGCGATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610582 74 + 60714840 GCCTGGATTGGAGATATGGGCCTAAGGTGGAGATCTGTGCCTGGATTGGAGATCCGGGCCTGGATTGGCGATAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710727 55 + 51301725 gcctggagtggagatatgggcctggagtggagatctggacctggagtgg-------------------agatat i papAnu2.chr19 C 0 I 249 s chlSab2.chr6 47448356 55 + 50890351 GCCTGGATTGGAGATAAGGGTTTGGAGTGGAGATATGAGCCTGGAGTAC-------------------AGATAT i chlSab2.chr6 I 58188 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=8537.000000 s hg38.chr19_GL949748v2_alt 738143 21 + 1064304 GGGCCTAGGGTGGAAATAT-------------------CA s panTro4.chr19 59675797 40 + 63644993 GGGCTTAGGGTGGAAATATAGGCCTGGAGTGGAGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610656 40 + 60714840 GGGCCTAGGGTGGAAATATCGGCCTGGAGTGGAGATATGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711031 21 + 51301725 gGGCCTGGGATGGAAATATGG------------------- i papAnu2.chr19 I 249 C 0 s chlSab2.chr6 47448411 21 + 50890351 GAGCCTGGAGTGGAGATATCA------------------- i chlSab2.chr6 C 0 T 58264 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=38482.000000 s hg38.chr19_GL949748v2_alt 738164 46 + 1064304 GCCTGGAGTGGAGATATGGGCTTGGGGTGGGGATATGGGCCTGGAA s panTro4.chr19 59675837 46 + 63644993 GCCTGGAGTGGAGATATGGGCTTGGGGCGGGGATATGGACCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610696 46 + 60714840 GCCTGGAGTGGAGATATGGGCTTGGGGTGGGGATATGGACCTGGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711052 46 + 51301725 GCCTagagtggagatatgggcctggagtggagatctgggcctggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390168 46 + 50890351 GCCTGGAGTGGAGATATAGGCCTGGAGTGGAGATATGGGCCTGGAG i chlSab2.chr6 T 58264 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=941145.000000 s hg38.chr19_GL949748v2_alt 738210 842 + 1064304 ACTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTAACTTCAGCCCAGGAAGGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGGCTGGTTCGCCTGC-----AGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTCGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGAGGACCCTGGGGTGCTCAGCCCACATTTCTGACCTCG-CCTCCCTGGCCTCTCAACCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAG---GGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTTGGGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGATGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCGTTCAGGCATCCGCTGATA-TCCATTCACAAAGGACATGCCCTCCACCTCATGTCTACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATCAAAATCTAGTAGGAGTCTCTTTACTCAGCACTTGCTCAAAGTTCTCAGCTGAGGCTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTCAGCCCTGGGCACCAAGGTGTGATAGTAGCCAT s panTro4.chr19 59675883 841 + 63644993 GCTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTACCTTCGGCCCTGCAGAGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGCCTGGTTTGCCTAC-----AGATGGATCATCCATTATGATCTTTCTTTCCAGGGTTCTTCTTGATGCAGGGGGCCTGGCCACACATGGGTGAGTCCTTCTCCGAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACCGGAGGGAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAAGGGACCCTCGGATGCTCCGCCCACAGTTCTGACCTCG-CCTCCCTGGCCTTTCATTCCCTTGGCAGAGTCAAGTCCTGTGGGGACCAG---GGTTACACTAGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCACTGCACCAGAAGAGGT-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGCTTATTTTCATTCAGGAATCCACTGATA-TCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTCTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTC-TTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGACACCATGTCTTTGTGGGATGCGTCCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAGCAGCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610742 839 + 60714840 GCTGGGTCTCTGCACAGCCAACAGCCGTGTTCTTCGGTGCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGTTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGCGTGGTTTGCCTGC-----AGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTC---CTCCAAACCTCAGGGTGTCATCTCCCCACATAAGAGGATTTCCCCAAAATGGGAGGGAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGACCGCAGTTCTGACCTCG-CCTCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTGTGGGGAGCAG---GGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCATTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGACGGGGGCTCCGTTGTTTATTTTTGTTCAGGCATCCACTGATATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTC-TTACTCAGCACCTGCTCAAAATTCTCAGCTGACACTTTTGTTGTAGGGAGACACCATGTCTTTGTGGGATGGGTCCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAACAGCCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11456 879 - 21488 CCTGGGTCTCTGCACAGCCGAGAGCCCTGTTCTTGGCAGCAGGTAGGCAGCGAGGCTAAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGCCCAGTCGGGGCAGC-AGGGTGCCCTGCTTTGCGTGCGGATGGGATGGATCCTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGCGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGCCCAGTGGGGGATTTTCTTATGAACAAGGATGAGGAGACCTGGGGGCGCTCAGCCCACAGTTCTGACCTTGCCCTCCCCAGCCTTCCTTTCCCTTGGCTGGGTCAGGTTTTGTGGGAACCCGGGAGGGTAGACTGGGGTCCCCCAAGCTGGGCTGTGCGGGGGGGATGTGGTGTCACCGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCTAAGAGGTG-GGGGAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTGTATTGTGGTTCACGCATTGGCTGATATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCTA-TTTGTGTTGTTTTCTGTGAGTAATCTTGCAGTATTCAAATCTAGTAAGAGTCGC-TTATTCAGCACTTGCTCAAAGTTCTCAGCTGACAC--TTGTTGTAGGGAGGCGCCAAGTCTATCCCAGGTGGGTCCTTCCTGTAGCCCTGGCCACCCAGGTGTGGTAGGGGCCTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47711098 840 + 51301725 gCCGGGTCTCTGCACAGATGAGAGCCCTGTTCTTGGGGGCAGGTAGGCAGAGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTGACAGCCCAGTGGGGGCAGCAAGGGAGGCCTGGTTTGCCTGC-----AGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGGCCACATGAGGGTGAGTCCTTCCCCAAACGTTAGGGTGTCCTCTCTCCATGTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAG---GGTAAGACTGGGGTGCTCAAAGCTGGGGTGTGGAGGGGGGAAGTGC---------------------------------TAGGAACAGCAGGTCCTCTGAGGACATAGGTGTGACTCACACACTTGAGTGTTTCCATGAcggtcagggctgcagtgtggCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCCGCTGATGGGGGCTCAgctgtttatttttgttcaggCATCGGCTGGTATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTTTATGTGAGTCATCTTGCAGTATTAAAATCTAG---GAGTCGC-TTACACAGCACTTGCTCAAAGTTCTCAGCTAACAC-TTTGTCGCAGGGAGACACCATGTCTTTGCGGAATGGGTCCTTCCTTTAGCCCTGGGCACCCAGGTGAGGTAGGAGCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390214 840 + 50890351 GCTGGGTCTCTGCACAGCTGAGAGCCCTGTTCTTGGGGACAGGTAGGCAGTGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGCTTAGTTTTCCTGC-----AGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGTCCACATGAGGGTGAGTCCTTACCCAAACGTTAGGGTGTCCTCTCTCCATGTAAGAAGATTTTCCTGAAACAGGAGGGAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAG---GGTGAGACTGGGGTGCTCAAAGCTGGGGTGTGGAGGGGGGAAGTGC---------------------------------TAGGAACAGCAGGACCTCTGAGGACATAGGTGTTACTCACACACTTGAGTGTTTCCATGACGGTAGGGCCTGCAGTGTGGCTGCTGCCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCTGCTGATGGGGGCTCAGCTGTTTATTTTCGTTCAGGAATCGGCTGATATTCCATTCACAAAGGACATGCCCTCCACCCCGTGTCTGCCTTGTGTTGTTTTATGTGAGTGATCTTGCAGTATTAAAATCTAA---GAGTCGC-TTACTCAGCACTTGCTCAAAGTTCTCAGCTAACAG-TTTGTTGCAGGGAGATGCCATGTCTTTGCGGGATGGGTCCTTCCTTTAGCCCTGGGCACCCAGGTGAGGTAGGAGCCAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=527581.000000 s hg38.chr19_GL949748v2_alt 739052 392 + 1064304 AGAAACGTGGAAAGCGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGTTCCACATCCTCCTCTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTGTGGTGCCTCT---AGGACATGTCATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTTCAGTCTGTACAAGGAAGGTGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCCGCACA-ACAGGGACATACAGATGT--CGGGGTTCACACACACACTCCCCCAGTGGGTGGTCAGCA---CCCAGCAACCCCCTGGTGATCGTGGTCATAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59676724 393 + 63644993 AGAAACGTGGAAAGCGAGGAGAATCTTCAGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGCAGTGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCCTGTGGTGCCCCC---AGGACATGTGATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTTCAGTGTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTTTACAACAGAATATTCTGGAAGAGCCTTTTCATGGGCCCTGTGACCCAAGCACAGGCAGGGACCTACAGATGC--CGGGGTTCACACCCACACTCCCCCAGTGGGTGGTCGGCA---CCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAGAGGGCTCCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611581 390 + 60714840 AGAAACGTGGAAAGTGAGGAGAATCT---GAGCACAGGGAGGGAGGGGCAGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTCTGGTGCCTCC---AGGACATGTGATTCTTCAGTGTCATTCTTATCTTAGGTTTAACAACTTCAGTCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAACAAAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACACGCAGGGACCTATAGACGT--TGGTGTTCACACCCACACTCCCCCAGTGGGTGGTCGGCA---TCCAGCAACCCCCTGGTCATCATGGTCACAGTTCAGAGGGCTCCTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12335 393 - 21488 AGAAAGGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCTTCTCTAAGGCAGTGCCTCCTTCTCCCCAAGGTGGTGAGGTCAAGCCCTTGCTGTCTGCCTCGCCCAGCACTGTGGTGCCTCC---AGGACATGTGACTCTTTGGTGTCATTCTTATCTTGGGTTTAACAACTTCAGTCTGTACAAGGAAGACGGGGTGCCTGTCCCTGAGCTCTACAACTGAATATTCTGGAACAGCCTTTTAATGGGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGT--TGGGGTTCACACCCACACTCCCCCACTGTGTGGTCTGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47711938 384 + 51301725 AGAAACATGGAAAGCGAGGAGAATCTTCTGAGCACACGGAGGGTGGGGCGGC------TCCGCCTCTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCGGCCTGGCCCAGCCCTGTGATGTCTCC---AGGAT--GTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAACAGATTCAGTCCGTACAAGGAAGACGGGGTGCCTGTCCCTGAGCCCTACAACAGAATATTCTGGAACAGCTTCCTCATGGGCACTTTGATCCCA-CACATGCAGGGACCTACAGATGT--GGGGGTTCACACCCGCACTCCCCCAATGGGTGGTTGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391054 384 + 50890351 AGAAACGTGGAAAGCGAGGAGAATCTTCTGAGCACACGGAGGGTGGGGCGGC------TCCTCCTCTCTAAGGTGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTTGGCCTGGACCAGCCCTGTGATGTCTCC---AGGAC--GTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAACAACGTCAGTCTGTACAAGGAAGATGGGGTGCCTGTTCCTGAGCCCTACAACAGAATATTCTGGAACAGCTTCCTCATGGGCACTTTGATCCCA-CACATGCAGGGACCTACAGATGT--CCGGGTTCACACCCACAATCCCCCAAAGGGTGGTCGCCT---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770027 390 + 49145316 AGAACAGTGGGAA--GAAGGAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCCCCTCTCT-AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCAC-ACTGGCCGTTCC--AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 T 3003 I 914 e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=659184.000000 s hg38.chr19_GL949748v2_alt 739444 554 + 1064304 TTGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCATGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGTGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatgtatgttataggggaagggactgaaggggaagatggagctc-------------------------atggggagacagcctggactgtcccactgggctcagtgtaatcacaagggtgcac-atgaaaggaggaggaagaggggagtggggattagagcagtccagtggaagtcttcaccagctttgaaggtggaggaaggccaagagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcca--gagtctccagagggaacaaagccctgcagatgccttgattttagcccaggaaaaatagggtccaatttctgtctccagtactggaaggtgtcagtgtggtctctcctgcttccatgcttctgataattt s panTro4.chr19 59677117 565 + 63644993 TGGGATTCTCCTGGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGA--------------AGGCCCTGAGTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtgctgggaagaataattgtccccagtgatgactgcattctaatccctggagtctgtgactatttatgttacaggggaagggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagatggcctggactgtcccagtgggctcagtgtagtcacaagggtccac-atgaaaggaggaggaagatgagagtggggattagagcagcataatgggagtctccatcagctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcct--gagtctccagagggaacgaagccctacagatgccttgattttagcccacgaaaaacagggtcccatttctgtctccagaattggaaggggtcagtgtgctctctcctgctgtcatgcttctgataattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611971 579 + 60714840 TGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaacaattctccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatagagctcaggttgttgatgagttgaccttgagatggggagacagcttggaatgtcccggtgggctcagtgtaatcacaagggtctacaatgaaaggaggaggaagaggggagtggggattagagcagcgtaatgggagtctccctcagctttggaggtggaggaaggccgtgagccacgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcct--gagtctccagagggaatgaagccctgcaggtgccttgatttcactccaggaaaaaaagggtccgatttctctctctagaattggaagGAGTCAATGTGCTCTCTTCTGCTGCCAT-CTTCTGATAATTT i ponAbe2.chr19 C 0 I 20808 s nomLeu3.chr10_GL398297_2_random 12728 579 - 21488 TGGGATTCTCCTTGTCCCACCTCCTAAGTCCCAGAGCTCCTGGTGGGCGTGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGGGGGAAAGGGGCATTGAATACAGGGAAAGAGGTGCtgtggtgggaagaataattgtccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggtggttgatgagttgaccttgagatggggagacaacctggactgtccctctgggcacagtgtaatcacaagggtccac-atgaaaggaggaggaagaggggagtggggattagagcagcgcaatgggagtctccatcagctttgaaggtggaggaaggccacgagccatgaatgcaggtggcctgtagaggctggaaaagtcaaggaactgattctcct--gagtctccagagggaacgcagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttgtgtctccagaagtggaaggggtcagtgtgttctctcctgctgccatgcttctgataattt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47712322 578 + 51301725 TGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCAAT-ATGGCTACATTCTAATCCCTGGAGCCTATGACTCTTTATGCTATAGGGCAGGGGACTGAAGGGGAAGACGGAGCTCTGGTTGTTGATGAGTTaaccttgagatggggagacGGCCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGACCAC-ACGAGAGGAGAAGGATGAGGGGAGTGGGGATTAGAGCAGCGTCGTGGGAGACTCCATCCGCTTTGAAGGTGCAGGAAGCCCATGGGCCACCAATGCAGGTGACCTATAGAGTCTGGAAAAGTCAAGGAACTGATTCTCCC--AAGTCTCCGGAGGGAACGCAGCCCTGCAgatgccttgattttagcccaggaAAAACAGGGTCCAATTTCTGTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccttgctTCTGATAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391438 581 + 50890351 TGGGCTTCTCCTTGTCCCACCTCCCGAACCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTGAAGGGGGATTGAATACATGGAGATCGGTGCtgtgatgggaagaataactgtccccaatgatggctacattctaatccctggagcctgtgactatttatgctatagggcaggggactgaaggagaagacggagctctggttgttgatgagttaaccttgagatggggagatggcctgaactgtcccgctgggctcagtggaatcacaagggaccac-acgagaggagaaggaggagggcagtggggattagagcagcatagtgggagactccatctgctctgaaggtgtaggaagcccatgggccaccaatgcaggtgacctatagaggctgaaaaagtcaaggaactgattctcccctgagactccagagggaacgcagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctgtctccagaagtggaaggggtcagtgtgttctctcctgctgccttgcttctgataattt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=832388.000000 s hg38.chr19_GL949748v2_alt 739998 701 + 1064304 tgtacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAACAACCCAAGGAAagccaggcatggtggcaggtgcatgtaatcctagcgactcaggaggctgagggcaggagaatcacttgaacccaggaaacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaaaaTTAATTAATTAATTAAagaaaccaaagaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgatactcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTATTCATCAGTTCATATCTTCTGCCAAGGATTGCAATTCATCCAAAAGAGATTGAACCAGGCTGATAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTTCACCCCCACATAAACAGCAGGAAAGACATTAGTGTGAAATAGATACAACACCCCAAGAGATGAGGCTAAGCCCAGTGGGAAGGGAATCAGAGGCTACTagagacagagggacagagaagagggagggagacagaTGGAAGG s panTro4.chr19 59677682 701 + 63644993 tctacagcaacaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAATGACACAAGGAtagccgggcgtggtggcaggtgcatgtaatcctagcgactcggcaggctgagagcaggacaatcacttgaacccaggagacagacgttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaaaaTTAATTAATTAATTAAAGAAACCAAACAAAGAGAAGGTTGGCTACACCAAGATCATCAAGTGTGGGATGATGATGCCACAACCATGTTCCATCCACATAGGGAAGTGTTGATACTCCTCAAACCAGCACCAGGAGCCAGCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATAGCTCCTGCCAAGGATTCCAATTCGTCCAAAACAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATCGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAATGGGAAGGGAATCAGAGGCTACTAGAGACAGAGAGACAGAGAAGAGGGAGGGAGACAGATGGAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633358 699 + 60714840 tctagagcagcaacaggaaaccaacacTGGAACCCAGATCAAGGACAAGTTAAGAaaggacacaaggatagctgggcatggtggcaggcccatgtaatcctagtggctccggaggctgagggcaggagaaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaaaaTTAATTAATTAATTAAagaaaccaaacaaggggaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacagagggaggggttgatgctcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACAGTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATGCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCCGCCTATCCTGGTTCGTCTTCCACCCCTACATAGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGGCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATC--AGGCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGAAGACGGATGGAAGG i ponAbe2.chr19 I 20808 C 0 s nomLeu3.chr10_GL398297_2_random 13307 700 - 21488 tctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAACGACACAAGGAtagccgggcgtaatggcaggcacatgtaatcctagcgactcaggaggctgagggcaggggaatcacttgaacccaggagacagaggttgcagtgagccgagaccacaccacttcactccagcctgggcgacggagtgagactctgtctccaaaaTTAATTAATTAATTAAagaaaccaaacagggagaaggttggctaccctgagatcagcaacggtggggtgatgatgccaccaccaggctccatccacatagggaggggttgatcctcctcaaaccagcaccaggagccaccctatggaagct-gcaccatggagaaggcaccgacatggcgagagTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTGCTGATCAGTTCATACCTCCTGCCAAGGATTCCAGTTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATAGACAGCAGGAAAGACATTAGTGCCAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGTTGGAGGGAAATCAGAGGCTACTagagacagagggacagagaagagggagggagacagaTGGAAGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47712900 699 + 51301725 TCTACAGTGGCAACAGGAAACCAACACTGGAATCCAGGTCATGGATAAGTTAAGAAACGGCCCAAggatagccgggcgtggtcgcaGGCGCATGTAATCttagcgactcgggaggctgag-gcaggagaatcgcttaaacccaggaagcagaggttacagtaagctgagaccacaccacttcactccagcctgggcgaaggagtgagactctctctccaaaattaattaattaattaaagaagcCAAACAAGGAAAAGGTTGGCAACCCCGAGATCAGCAAGGGCGGGACGCTGATGCCACCGCCAGGTTCGATCCACAAAGAGAGGGGCTGATAGTCCTCGAACCAGCACCAGGAACCACCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATA-TGTCTGCCAAGGACTCCAATGTGTCTGAAAGAGATTGAACCAGCCTGCTAAGAGCCTGGACATGCAGCCTGTCCTGGTTCCTCTTCCACCCCCATGTAGACAGCCGGAAAGAGATGAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCAGGGGCTactagagacagagagacagagaagagggtgggagacagaaggaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392019 694 + 50890351 tctacagcggcaacaggaaaccaacacTGGAATCCAGGTCATGGACAAGTTAAGAAGTGGCCCAAGGAtagccgggcgtggtcgcaggcacatgtaatcctagtgactcgggaggctgag-gcaggagaatcgcttaaacccaggaggcagaggttgcagtaaaccgagaccacacctcttcactccagcctgggcaaaggagt--gactctgtctccaa----aaTTAATTAATTAAagaagccaaacaaggaaaaggttttcaaccccgagatcagcaagggcaggacgctgataccatcaccaggttcgatccacatagggaggggctgatagtcctcgaaccagcaccaggaaccaccctatggaagctgtcaccatggagaaggcacagagatggcaagagcggctcccaatccccaccagaaacagggagtgtggacactggtgcctgccttactgatcagttcatacttcctgccaaggactccaatgtgtccaaaagagattgaaccgggctgctaagagcctggacatgcagcctgTCTTGGTTCCTCTTCCACCCCCACGTAGACAGCCGGAAAGAGATTAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCATGGGCTACTagagacagagagacagagaagagggagggagacagaTGGAAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=153347.000000 s hg38.chr19_GL949748v2_alt 740699 67 + 1064304 ACCTGCACCAGGAGTTAAGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGAC s panTro4.chr19 59678383 67 + 63644993 ACCTGCACCAGGAGTTATGGGCACAGAAAAGAACTTCAAGACACAGAGAGGAAGGAGAGAGACAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634057 67 + 60714840 ACCTGCACCAGGAGATATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14007 67 - 21488 ACCTGCACTGGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGAC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11514 67 + 40826 ACCTGCAACAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGAGGAGGAGGAGAGAGACAGAC i rheMac3.chrUn_JH290802 I 3 C 0 s macFas5.chr19 55639272 67 + 59248254 ACCTGCAACAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGAGGAGGAGGAGAGAGACAGAC i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47713599 67 + 51301725 aCCTGAAACAGGAGTTAAGGGCACAGAAAAGAAcatggagacacagagaggaaggagagagaaagac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392713 67 + 50890351 ACCTGCACCGGGAGTTAAGGGCACAGAAAAGAACATGGAGACACAGAGAGGAAGGAGAGAGACAGAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I a score=8664.000000 s hg38.chr19_GL949748v2_alt 740766 5 + 1064304 ACCAG s panTro4.chr19 59678450 5 + 63644993 ACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634124 5 + 60714840 ACCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14074 5 - 21488 ACCAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11581 4 + 40826 -CCGG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47713666 5 + 51301725 accAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392780 5 + 50890351 ACCAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55639339 0 + 59248254 C a score=717648.000000 s hg38.chr19_GL949748v2_alt 740771 400 + 1064304 CAAGGGGAAGCCTCACTCATTCTAGGTGCCATGGATGGGAT-GATAAAGAGAGACACCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCGCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCAGGTTTGAGCACTTCCTTCTGCACAGAGAAGGGAAGTTTAAGGACACTTTGCACCTCATTGGAGAGCACCATGATGGGGTCT------CCAAAGCCAACTTCTCCATCGGTCCCATGATGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTCATCACAGGTGAGAGTGTCCGGAC s panTro4.chr19 59678455 400 + 63644993 CGAGGGGAAGTCTCACTCATTCTAGGTGCCATGGATGGGAT-GATAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACACAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAATCATCCTGCAATGTCGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGAGTGTAACGACACTTTGCACGCCATTGGAGAGCTCCACGATGGGGTCT------CCGAGGCCAACTTCTCCATCGGTCCCATGACGGAAGACCTGGCAGGGACCTACAGATTCTACAGTTCTGTTCCTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634129 400 + 60714840 TGAGGGGAAGCCTCACTCATTCCAGTTGCCATGGATGGGAT-GATAAAGAGAGATGCCTTCTAAACTCCCAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTGGTGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGAGTTTAACGACACTTTGCGCCTCATTGGAGAGCTCCATGATGGGGTCT------CCAAGGTCAACTTCTCCATCGGTCCCATGATGCCTACCCTTGCAGGGACCTACAGATGCTACGGTTCTCTTTCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCATGATGACAGGTGAGAGTGTCCAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14079 400 - 21488 AGAGGGGAAGCCTCCCTCATTCCAGGTGCCATGGATGGGAT-GATAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAAATGTCATGTTTGAGCACTTCCTTCTGCACAGAAAGGGGAAGTTTGAGGGCACTTTGAACCTCACTGGAGAGCTCCATGATGGGGTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGAGGCACGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11585 399 + 40826 GGAGGGGAAGCCTCACTGATTCCAGGTCCCATGGATGGGAT-GACAAACAGAAACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACGGTCGTCCTGCAATGTTGGTCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGAGAGGGGATCTCTGAGGA-CCCCTATGCCTCGTTGGAGAGCTCCATGATGGGGGCT------CCAAGGCCAACGTCTCCATGGGTCCCATGACGCCTGCCCTTGCAGGGACCTACCAATGCTATGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGTCCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCAGAC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47713671 400 + 51301725 GGAAGGAAAGCCTCACTCATTCCGGATCCTGTGGATGAGAT-GAAAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGGAAGCTTGAGGAGCCCTTGCGTCTCATCGGAGAGCTCCATGACGGGGGTT------CCAAGGCCAATGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACCTACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCTCCCAGTGACCCCTTGGACATCGTGATCACAGGTGAGAGTGTCAGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392785 401 + 50890351 GGAGGGGAACCCTCCCTCATTCTGGATCCTGTGGATGAGATAAAAAAAGAGAGACGCCTTCTAAACTCACAAATTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGGAAGCTTGAGGAGCCCTTGCGTCTCATCGGAGAGCTCCATGACGGGGGCT------CCAAGGCCAATGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACCTACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCCCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 402 + 49145316 CGAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGT-GAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGAACTTGACACGAGGTTGGAGGCTGGGACTTACTACGTCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGAC i calJac3.chr22 I 914 I 625 e macFas5.chr19 55639339 0 + 59248254 C a score=28108.000000 s hg38.chr19_GL949748v2_alt 741171 17 + 1064304 A---TTCTCATTGTCATTGG s panTro4.chr19 59678855 20 + 63644993 ATTCTTCTCATTGTCATTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634529 20 + 60714840 ATTCTTCTTATTGTCATTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14479 20 - 21488 ATTCTTCTCATTGTCATTGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 11984 20 + 40826 ATTCTTCTCATTGACAGTGG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47714071 20 + 51301725 ATTCTTCTCAATGTCACTGG i papAnu2.chr19 C 0 M 1510 s chlSab2.chr6 47393186 20 + 50890351 CTTCTTCTCATTGTCACTGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e macFas5.chr19 55639339 0 + 59248254 C a score=503955.000000 s hg38.chr19_GL949748v2_alt 741188 423 + 1064304 GCTGCAGAGTGAATGATCCACGACTTGGAACC-CCCAGGTAGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGCTGAGGTTTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACGGAGgacagacacaggggccatacagggagttagaaaagacagaaagagttaaaagaga----cagacagacagacaTGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAG--GCCATGTTTATTCTGACACCTCTGCC s panTro4.chr19 59678875 425 + 63644993 GATGGAGAGTGAATGATCCACGACTTGGAACC-CCCAGGTAGTTCTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAAGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGATGGAAAGAGCTAAAGGACA----CAGACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACTTCCACAAAGTGTTCTCTACCATAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCCTGTGGCACCTACAGATGCTGTGTTTATTCTGACACCTCTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634549 424 + 60714840 GATGCAGAGTGAATGATCCAGAACTTGGAG-G-CCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGGGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGATAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGAGAGCTAGAAAAGACACAAGGAGTTAAAGGAGA----CAGATAGACAGACATGTCCCAGAGAGAGGTGACCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGATTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCAAGTTTATTCTGACACCTCTGCC i ponAbe2.chr19 C 0 T 21269 s nomLeu3.chr10_GL398297_2_random 14499 423 - 21488 GACACAGAGTGAATGATCCAGGACTTGGAG-G-CCCAGGTGGTTGTAAGGAAGATGAGCGTGGGGTTCTTATGAAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAAAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGGGAGTTAGAAAAGACAGAAAGAGTTAAAGGAGA----CAGACAGACAGCCATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAAGTTAGCAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACTCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCA-GCCTTGTGGAACTTACAGATACCGTGTTTATTCTGACACCTCTGCC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 12004 429 + 40826 GACACAGAGTGAATGATCCAGGACTTGGAA-GCCCCAGGGTGTCATGAGGAAGATGAGTGTGGCATTCTTATGGAGAGAGACTCACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAATAGGAGACACAAGTACAGACCACGTGTCATAACAGAGGACAGACACAGGGGCCACACAGGGAGGTAGAAAAGAGAGAAAGAAGTAAAGGAGACACTCAGACAGACAGACACGTCCCAGAGAGAGGCGTCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAACTTCATCTCTGTGTTACCTCCACAGAGTGATCTCTACCGGGAGAACCCAAGAGCACCCTTATTTCTCACCTTAGTTGGGCCCTGGGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTCATTCTGACACCTCTGCC i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47393206 428 + 50890351 GACACAGAGTGAATGATCCTGGACTTGGAG-G-CCCAGGTGGTTGTAAGGAAAATGTGCATGGGATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAGCAGGAGACACAAGCACAGACCAGGTGTCGTAACAGAGGACAGACACAGGGGCCATACAGGGAGGTAGAAAACAGAGAAAGAGTTAAAGGGGACACCCAGACAGACAGACATGTCCCAGAGAGAGGCGTCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTGTTACCTCCACAATGTGTTCTCTACCAGGAGAACCCAAAGACACCCACATTTCTGACCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTGATTCTGACACCTCTGCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C a score=279401.000000 s hg38.chr19_GL949748v2_alt 741611 237 + 1064304 TTCCATGTAATGGAG-AGTAACCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAAAGGATCACTGAGAGGCACAGAGAAAAATCAGGAACACCAAAAAGCAAAGACATAAACACACGGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAA s panTro4.chr19 59679300 237 + 63644993 TTCCATGCAATGGAG-AGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGCAGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACTGagagacacagagagaaatcagggacaccaaaaagcaaagacataaacacacagagaaagagccagaggaaggagattgagagactcacagacacataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56613704 237 + 60714840 TTCCATGCAATGGAG-AGTAATCATCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAA i ponAbe2.chr19 T 21269 C 0 s nomLeu3.chr10_GL398297_2_random 14922 237 - 21488 TTCCATGCAATGGAG-AGTAATCTTCCCAGGATATCGTGGCCCCAGAACACCAACCCCTGTATGCCGTGTCAACTTGCGGTCCCCACACTGGATTCTGAGGCTCATATTCAAAATAATCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACAGACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACACAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 12433 238 + 40826 TCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCCCAGAACACCAACCCCTGTGTGCTGTGTGTACTTGGGGTCTCCAGACTGGATTCTGAGGCTCATATTCCAAACAACCACACATATGATAGGATTACTGACAGACACAGAGAGAAATCAGGGACATTAAAAAGCAAAGGCATAAACACACAGAGAATGAGCCAGAGGAAGGAGACTGACAAGCTCACAGCCACATAA i rheMac3.chrUn_JH290802 C 0 I 509 s chlSab2.chr6 47393634 235 + 50890351 TTGTGTGCAGGAGAG-AGTCATCATTCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCACACTGGATTCTGAGGCTCATATTCCAAATAACCCCACATATGATAGGATTGCTGAGAGACATAGAGAGAAATCAGGGACATCAAAAAGCAAAGGTGTAAACACAC--AGAATGAGCCAGTAGAAGGGGATTGAGAGACTCACAGACACATAA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C a score=196088.000000 s hg38.chr19_GL949748v2_alt 741848 164 + 1064304 AGAGAGAGAAAAGAGGGCAGAGGAGTGGTGAGAATGATGGCAGGGAGCAGAGAAAAGCACTAAAATTAGAGTCCTGAGAGAGAGGCACAAGGACATAGAAACATGGAGATGTGG-GGATGAATTGCAGAGATTCCAAagagagctagagagaccgagaggcagag s panTro4.chr19 59679537 162 + 63644993 agagagag--aagagggcagagaagtggagacaatgatggaagagagcagagaAAACCACTAAAATTAGAGTCCTGAGGGCGAGGCACAAGGGCATAGAAAGATGGAGATGTGG-GGATGAATTGCAGAGATTCCAAAGAGAACTAGAGAGACCGAGAGGCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56613941 164 + 60714840 AGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAAAAAAGCACAAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGG-GGATGAATTGCAGAGATTCcaaagagaactagagagaccgagaggcagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15159 164 - 21488 AGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCCCTAAAATTAGAGCCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGG-GGACGAATTGCAGCGATTCCAAAGAGAACtagagagaccgagagacagag i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 13180 165 + 40826 aGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGAGGGAAGGGAGCTGAGAAAAGCCCTAAAATCAGAGTCCTGAGGGAGAGGCACAAGGAGAGAGAAAGATGGAGATGTGGAGGATGAATTGCAGATATTTcaaagacaacgagacagactgagaggcagag i rheMac3.chrUn_JH290802 I 509 I 643 s chlSab2.chr6 47393869 160 + 50890351 ----AGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACAGAGAAAGCTGGAGATGTGG-GGATGAATTACAGAGATTCCAAAGAGAACTAGAGAGACCAAGAGGCAGag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C a score=348454.000000 s hg38.chr19_GL949748v2_alt 742012 482 + 1064304 caatacagatgata---------------------gatggatagatatagatagatgataaataggtagatgatagata----ataggttaaagatacatagatgatgattgattgattc----attaatagataatacatagagatgatgatgatgaa--------gacagata--------atacgt----acagatagagaggcagac------agaaatcat--agagagagagatgatacatacatataaataacagatgattgatggatagatagacaactgat----agatacatagatgatatatagatatagatgacaggtagagaatttgtagataggcaccgaatagataaatagatagatcgacagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAACGTGAGAAACTTAGAATTTA-AAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAACGGAAAACA----TATCTAGAGGTGGGGAAGCGAGGTCagagacct s panTro4.chr19 59679699 515 + 63644993 CAagacagatgatagatggatagatagagatagatgatggatagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgattgattgattc----attaatagatgatacatagagatgatgatgatgaagatagatggatagata--------ATACAT----agagatagagaggaagacaaagagagaaatcatagagagagagagaTGATACATatatatagataatagatgattgatg----gatagacaattgat----agataaatagatgacatagagatatagacgacaggtagagaatttgtagataggcaccgaatagataaatagatagattgatagataatagatagaAATCTGCAGAAAGTTATGAACGGGTCACAAACTGAGAAACTCAGAGTTAA-AAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAACGGAAAACA----TATGTAGAGGCAGGGAAGTGAGGTCAGAGACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614105 496 + 60714840 caagacagatgaca---------------------gatggatagatatagatagatgataaataggtagatgatagata----ataggttatagatacaaagaagatgattgattgattcattgattaatagatgatacatagagatgatgatgatgaa--------gatagata--------atacat----agagttagagaggcagacaaagagagaaatcatagagagagagagatgatacatagatatagataatagatgattgatggctagatagacaattgat----agataaatagatgatatatagatatagatgacaggtagagaatttgtagagaggcaccgaatagataaatagatagatcgatagagaatagaTAGAAATATGCAGAAAGTTATGAACAGAACACAAAGTGAGAAACTCAGAATTTA-AAAAAGTAACATTAAGTCAACCAACCCAAGGAGGGTC--AGAGAATAAAACAATCCAAAAAGGGAAAACATATCTATCTAGAGTTGGGGAAGTGAGGTCAGAGACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15323 493 - 21488 caagacagatgata---------------------gatggatagatatagatagatgataggcaggtagatgatagata----ataggttgtagatacatagatgatgattgatggattc----attaacggatgatacatagagaggatgatgatgaagata----gatagata--------atacat----agagatagagaggcagacaaagagag-aatcatagagagagggagatgatacatagatatagataatagatgattgatggatggatagacaattgat----agataaatagatgatatatagatacagatgagaggtagagaatttgtagataggcaccaaatagataaatagatagcttgatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTTA-AAAAAGTAACATCAAGTCAACCAATCCAAGGGGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACA----TATCTAGAGGTGGGGAAGTGAGGTCAGAGACCT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47394029 513 + 50890351 aaagacagatgatagatg-----------------gatagatagatatagagagatgataaatagttaggtgatagataatagataggttatagatacatagatgatgattgcttgtttcattgattaatagatgatacatagagatgatgatgatcaagata----gatagataaatatatgatacatcgagagagagagagaggcagacagagagagaaatcag--agagagagagatggtacattgatacagataacaggtgatggatggatagatagacaattgatagagagataaatagatgatacatagatatagatgacagat----aatttatagatagaccctgaatagatcaataga----tcagtagataacatatagaaatataCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTTAGAATTAATAAAAAGTAACATCAAGTCAACAAATCCAAGGAGAGTCAGAGAGAAGAAAACAATACAAAAAGGGAAACCA----CACCTCGGGCTGGGGAAGTGAGGTCAGAGACCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 13345 643 + 40826 I a score=64467.000000 s hg38.chr19_GL949748v2_alt 742494 62 + 1064304 agagagacagagaaggtggaagaaggaaatagacatgaagagagat-ggggtggagggtgaga s panTro4.chr19 59680214 60 + 63644993 agagagacagagaaggcagaaggaggaaatagacatgaagagagtt-ggggtggagggt--ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614601 58 + 60714840 AGAGAGACAGAGAAGGTGGAAGGAGGAAGTAGACATGAAGAGAGAT-GGGGTGGAGGGT---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15816 59 - 21488 AGAGAGACAGACAAGGTGGAAGGAGGAAATAGACACGAAGAGAGATGGGGGTGGAGGGT---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chrUn_JH290802 13988 62 + 40826 agagagagagagaaggtgaaaggagaaaatagacatgaagagacat-ggggtggagggtaaga i rheMac3.chrUn_JH290802 I 643 I 26356 s chlSab2.chr6 47394542 62 + 50890351 AGAGACACAGAGAAGGTGGAAGGAGGAAACAGACATGAAGGGAGAC-GGGGTGGAGGATGAGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C a score=70598.000000 s hg38.chr19_GL949748v2_alt 742556 91 + 1064304 gagagagagagagagCATTAGGTCATAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGATCCTCCCTGAGG s panTro4.chr19 59680274 93 + 63644993 gagagagagagagagCATTAGGCCATAGAGCAGGGG-AGTCACTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614659 87 + 60714840 ----GAGAGAGAGAGCATTAGGTCATAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15875 87 - 21488 ----GAGAGAGAGAGCATTACGTCATAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGCAGCTGTGACAAGGAAGAACCTCCCTGAGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47394604 90 + 50890351 ----GACAGAGAGAGCATTAGGTCATAGAGCAGGTGCAGTGAGTTCTCAGCTCAGATGTGAAGGGAGCAGTGACAAGGAAGAACCTCCCTGAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=102322.000000 s hg38.chr19_GL949748v2_alt 742647 93 + 1064304 --AAAATGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCTGGCAGGAGAGAGCGTGACCTTG s panTro4.chr19 59680367 93 + 63644993 --AAAATGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614746 93 + 60714840 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAAGGTGACCTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15962 93 - 21488 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47394694 93 + 50890351 --AAACTGCCTCTTCTCCTTCCAGGTCTATATAGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCGCGCAGGAGAGAACGTGACCTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772358 95 + 49145316 AAAATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTA i calJac3.chr22 I 625 C 0 e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=764000.000000 s hg38.chr19_GL949748v2_alt 742740 577 + 1064304 TCCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAATGTAGGTTCTCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTG------CCACCCACGGAGGAACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCATACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAACCCCATATCTGTCTCATGTCCTAT---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGATAAGCATGGACAGATGCAGAGA-GAAGACGAAGCTTGGGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACACGGCCTGCATGAAGGCCCGCGGCCAGGGCTCCAGGCACACAGGCAGATGGAGAAAGCGGTCAGGAGAGACCCAGA-GGA-GGGAGACTGGGCTCAGTTTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACATTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACACAGGGATGTC s panTro4.chr19 59680460 578 + 63644993 TTCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGTCCATGAACGTAGGCTCCCTGCAGTGCGCACCATCAATGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTG------CCACCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACGCTCCCTACGAGTGGTCAAACTCGAGTGATCCACTGCTTGTTTCCGTCACCGGTGAGGAAACCCCATACCTGTCCCATGTCCTAT---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGCAGAGA-TAAGACGCAGCATGCGTGTGAGGGAGGGATCAGGGCGCAGGACGGCAGACACAGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCCTCCGATTAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGAGACACCCAGA-GAAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTGCCCAGAAGCCCTTCCTGGCCTCTCACCCACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614839 578 + 60714840 TCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATTTATCCAGAGAGCAGGGGGGCCGTGAATGTAGGCTCCCTGCAGTGTCCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTG------TCACCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCTGTGACTCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAACCCCATATCTGTCTCATGTCCTAT---------GATCCTAAAGCCTTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGGAGCATGGACAGATGCAGAGA-GAACACGCAGCTTGGGTGTGAGGGCGGGGTTAGGGCGCAGGATGGCAGACACGGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCCTCCGATCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGAGATACCCAGA-GACGGGGAGACTGGGCTCAGTTTGGGAGGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGACTCTCACCCACACAGAGATGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16055 577 - 21488 TCCTGCAGCTCCAGGAGCTCCTATGACGTGTACCATCTATCCAGAGAGGAGGGGGGCCATGAACGTAGGCTCTCTGCAGTGCCCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTG------CCACTCACGGAGAGGCCTACAAATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCCAAGTGACCCACTGCTTATTTCTGTCACAGGTGAG-CAACCCCATATCTGTCCCATGTCCTAC---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGGATGGACAGATGCAGAGA-GAAGACGAAGCTTGTGTGTGAGGGCGGGGTCAGGGCACAGGATGGCAGACACGGCACCTCCAAACCCTCCTGCACGGCCTGCATGGATGCCCGCAGTCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGAGAGACCCAGA-GGAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCGTGGCCTCTCACCCACACGGAGATGTC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47715601 571 + 51301725 TCCTGCAGCTCCCAGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGCAGTGCCCAGTGTCCATGGAATGTTCCAGGCCGACTTCCCTCTGGG-------------ACCCATGGAGGGACCTACAGATGCTTTGACTCTTTCCGTGCCCCATCCTTCGAGTGGTCAGACCTGAGTGACCCACTGCCCGTTTCTGTCACAGCTGAGGAAAGCCTATGCCTGTCCCATGTCTTAT---------GACCCTAGAGCCATAGCTGGGGAGCTTCCTGCTGG------------------------TGATGGAGAGAAGCATGGACAGATGCAGAGA-GAAGACGAAGCCTGGGTGTGAGGGGGGAATGAGGGCACAGCATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCCGCGGTCAGGGCTCCAGGCACCCaggcagatggagaaactggTCAGGACAGACCCAGA-GGAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGaagcccaccctggcctctcacCCACAGAGAGATGTC i papAnu2.chr19 M 1510 C 0 s chlSab2.chr6 47394787 570 + 50890351 TCCTGCAGTTCCCAGAGCTCATTTGACATGTACCATCTGTCCAGGGAGGGGGAGACCCGTGAACTTAGGCTCCTTGCAGTGCCCAGTGTCCATGGAACGTTCCAGGCCAACTTCCCTCTGGG-------------ACCCATGGAGGGACCTACAGATGCTTCAGCTCTTTCTGTGCCCCACCCTTCAAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCTTTCACAGCTGAGGAAACGCCATGCCTGTCCCATGTCTTAT---------GATCCCAGAGCCATAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGGTTCAGAGA-GAAGACCAAGCCTCAGTGTGAGGGTGGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCGGCGTGGTGGTCCACGGTCAGGGCTCGAGGCACCCAGGCAGATGGAGAAACTGGTCAGGACAGACCCAGA-GGA-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCTTCCTGGCCTCTCACCCACAGAGAGATGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772453 577 + 49145316 TTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAG--CCCACACCTGCCACCTGTCCTGTTGTCCACTAAGTCCCAGAGCCATACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC----------CTCC-----------TACATGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCA-CCACAGAGAGATTTC i calJac3.chr22 C 0 T 2969 e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=474238.000000 s hg38.chr19_GL949748v2_alt 743317 427 + 1064304 ATCACCAGCAACCCCTA-CACCCTTTAC-TTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATATAGCTTACCACCTTTAACA---ttttttttttttttgaggcagagtcta--gctctgtcccctatgctgcagtgcagtggcacaatctcagctcactgcaacttccgcctcctgggttcaagtgattctcctgcctcagccacctgagtagctggtgctacaggcgcgcaccaccacgccaggctactttttgtatttttagtagagaggtggtttcaccatgttggtcgagctggtctccaactcctgaccacgtgatccacccgcatctgcctcccaaagtgctgggattacaggcatgagccaccactcccagccACATTTACCATTTTTAAGTGTAAAGTCTAGTGGTCATAAATACAT s panTro4.chr19 59681038 426 + 63644993 ATCACCAGCAACCCCTA-CATCCTTTTCTTTTTGTTTGAAAAAATATTTATTGAGGTTAAATATACCTATATAGCTTACCACCTTTAACG-----ttttttttttttgaggtggagtcta--gctctgtcccctatgcaggaatgcagtggcacaatctcagctcactgtaacctccgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtactacaggcgcgcatcaccacgccaggctactttttgtatttttagtagagagggggtttcaccatgttggtcgagctggtctctaactcctgaccacctgatccacccgtctcagcctcccaaagtgctgggattacaggcatgagccactgcgcccggccACGTTTACCAATTTTAAGTGTAAGGTCTAGTGGTCATAAATGCAT i panTro4.chr19 C 0 T 18641 s ponAbe2.chr19 56615417 425 + 60714840 ATCACCAGCAACCCCTA-CACCCTTTTCTTTTTGCTTGAAAAAATAtttattgaggtgaaatatacctatatagcttaccatctttaaca---ttttttttttttt---ggcggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaaacgattctcctacctcagccgcctgagtagctggtactataggcacgcaccaccacgccaggctactttttgtattttgagtagagagggggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgatccaccgcgcccggccacttttaccatttttaagtgtaaattctagtggTCataaatacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16632 412 - 21488 ATCACCAGCAACCCTTA-CACCCTTTTCTTTTTGTTTGAAAAAATAtttattgtgattaaatatacctatatagcttaccacctttaaca--------tttttttttgaggtggagtcta--gctctgtcccctacgctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtaccacaggtgcacaccaccatgccagcttactttct-tatttttagt--agggggggtttcaccctgttgttcaagctggtctcgaactcctgaccaggtgatccaccc------acctcccaaagtgctgggattataggcatgagccaacgcgcccggccacgtttaccatttttaagtgtaaagcctagtggtcataaatac-- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716172 423 + 51301725 ATCACTAGCAACCCCTAGGACCGTTTCCTCtttgtttgaaaaattatttattgaggtTTAATACACCTATATAGTTTaccacttttaaca---------ttttttttgaggcgaagtcta--gctctgtcccctatgctggagtacagtggcacaacctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataaatacat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395357 434 + 50890351 ATCACCAGCAACCCCTAGGGCCATTTTCTCTTTGTTTGAAAAAttatttattgaggttaaatatacctatatagtttaccacttttaacatttttttttttttttttgaggcggagtctcttgctctgtcccctatgctggagtacagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataaatacat i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=546.000000 s hg38.chr19_GL949748v2_alt 743744 1 + 1064304 T s panTro4.chr19 59662823 1 + 63644993 T i panTro4.chr19 T 18641 C 0 s papAnu2.chr19 47716595 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395791 1 + 50890351 t i chlSab2.chr6 C 0 I 25 e ponAbe2.chr19 56615842 0 + 60714840 C e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17044 0 - 21488 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=826.000000 s hg38.chr19_GL949748v2_alt 743745 25 + 1064304 tataaatatatatatatatatatat s panTro4.chr19 59662824 25 + 63644993 TTtatatgtatatatatatatatat i panTro4.chr19 C 0 I 62553 s ponAbe2.chr19 56615842 14 + 60714840 -------ttatatatatatat---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17044 20 - 21488 -atacatttgtttgtttgttt---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716596 11 + 51301725 --------tatatatttat------ i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=2114.000000 s hg38.chr19_GL949748v2_alt 743770 6 + 1064304 gtatgt s ponAbe2.chr19 56615856 6 + 60714840 gtatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17064 6 - 21488 gtttgt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716607 6 + 51301725 gtgtgt i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I e panTro4.chr19 59662849 62553 + 63644993 I a score=1324.000000 s hg38.chr19_GL949748v2_alt 743776 8 + 1064304 atatatat s panTro4.chr19 59725402 8 + 63644993 atatatat i panTro4.chr19 I 62553 C 0 s ponAbe2.chr19 56615862 8 + 60714840 atatatat i ponAbe2.chr19 C 0 T 34489 s nomLeu3.chr10_GL398297_2_random 17070 7 - 21488 ttgtttg- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716613 8 + 51301725 gtgtgtgt i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=-1270.000000 s hg38.chr19_GL949748v2_alt 743784 20 + 1064304 atacacacacatatatatac s panTro4.chr19 59725410 3 + 63644993 ata----------------- i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47716621 12 + 51301725 ------atacatatatgt-- i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56615870 34489 + 60714840 T e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17077 0 - 21488 C e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=12610.000000 s hg38.chr19_GL949748v2_alt 743804 54 + 1064304 atatatatatgtgtatatatatatatatatatatatata--------tatatatatatatat---- s panTro4.chr19 59725413 41 + 63644993 -------------tatatatatatatatatatatatata--------tatatataCtttttt---- i panTro4.chr19 C 0 T 62605 s ponAbe2.chr19 56581381 38 + 60714840 ----------------atatatatatatatatatatata--------tattttttttttttt---- i ponAbe2.chr19 T 34489 I 34451 s papAnu2.chr19 47716633 54 + 51301725 ------------gtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatatat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395817 43 + 50890351 --------------atatatatgtgtgtatatatatgtg--------tgtgtgtgtatatatata- i chlSab2.chr6 I 25 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17077 0 - 21488 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=91.000000 s hg38.chr19_GL949748v2_alt 743858 1 + 1064304 a s papAnu2.chr19 47716687 1 + 51301725 a i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56581419 34451 + 60714840 I e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17077 0 - 21488 C e chlSab2.chr6 47395860 0 + 50890351 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I e panTro4.chr19 59725454 62605 + 63644993 T a score=1563.000000 s hg38.chr19_GL949748v2_alt 743859 9 + 1064304 ttttttttt s panTro4.chr19 59662849 9 + 63644993 TTTTTTttt i panTro4.chr19 T 62605 C 0 s nomLeu3.chr10_GL398297_2_random 17077 7 - 21488 --tttgttt i nomLeu3.chr10_GL398297_2_random C 0 I 1 e ponAbe2.chr19 56581419 34451 + 60714840 I e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47395860 0 + 50890351 C e papAnu2.chr19 47716688 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=4401.000000 s hg38.chr19_GL949748v2_alt 743868 4 + 1064304 tttt s panTro4.chr19 59662858 4 + 63644993 tttt i panTro4.chr19 C 0 I 18630 s ponAbe2.chr19 56615870 4 + 60714840 TTTT i ponAbe2.chr19 I 34451 C 0 s nomLeu3.chr10_GL398297_2_random 17085 3 - 21488 -ttt i nomLeu3.chr10_GL398297_2_random I 1 I 1 s papAnu2.chr19 47716688 4 + 51301725 tttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395860 3 + 50890351 -tTT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=849798.000000 s hg38.chr19_GL949748v2_alt 743872 723 + 1064304 ttttAccctccacccttttcttcctggcctctggaagccaccattctactctctaccttcatgagatccaccttttagctc-tgtatatgggtgagaaatgggaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacattctctctatccattcatccactgatgggca-ggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagttattcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtcatcttggctcattgcaacctctgcctcctgggttcaaatgattttcctacctcagcctccctagtagctgggattacaggtgcacgccaccatgcctggctactttttggtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgtccgcctcggtctcccaaagtgccgggattacaggcatgatccacctcacccaacctctttttagttctttaaaggacttccacacttt s panTro4.chr19 59681492 724 + 63644993 tttTATcctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgagaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctcctctatgcgaacgtactacattctctctatccattcatccactgatgggca-ggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacaagtgcagatatcacttcgatacattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccacctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgtacgccaccatgcctggctactttttggtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgtccgccttggtctcccaaagtgccgggattacaggcatgatccaccccatccaacctctttttagttctttaaaggacttccatacttt i panTro4.chr19 I 18630 C 0 s ponAbe2.chr19 56615874 711 + 60714840 TTTTAccccccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctattcgttcatccactgatgggcagggtaggttgactccacatctcggctactgtgaacagtgctgcaccgatcatacgagtgcagatatcacttcgatata-tgatttcctttcc-ttggatataaacccagtagtgaaattgctggatactatgaa------------agtttttcgtttgttgtttttgttttagtttttgagacactttctctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccctagtagcagggattacaggtgcacgcccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17089 707 - 21488 tttTAccctccacccttttctccctggcctctggtagccaccattctactctctcctttcatgagatccaccttttagctcttgtgtatgggtgagaaatgggaa--------------tccagttccatccatgtgggtgcaaatgacaggatgttattgtttctatggatgagtagtctccactgtgtg--tgtactacattctctctatcca-tcacccactgacgggca-ggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatacgagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttctttttatttttgagacagtttccctctgtgcccaggctggagtaaaagtgatgtgatcttggctcattgcagcctccgcctcctgtgttcaaatgattttcctgcctcaccctccctagaagcaggcattacaggtgcacgccaccatccttggctactttttgtattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcggtctcgcaaagtgctgggattacaggcatgatccaccgcgcccaacctctttttagttatttaaaggacttccatgcttt i nomLeu3.chr10_GL398297_2_random I 1 C 0 s papAnu2.chr19 47716692 723 + 51301725 tttaaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAATCTTTGTAATGagctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCA-GGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaagttctctttttagtttttcatttgttgtttttgttttggtttttgagacagtttccctctgtgcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395863 717 + 50890351 TTTAAccttcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaatgtttgtaatgagctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggca-ggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgccttggtttttgagaccgtttccctctgtgcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 C 0 I 42340 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=277427.000000 s hg38.chr19_GL949748v2_alt 744595 339 + 1064304 tctccgtaaaggctgtactaatttacactcctaccaacagggtattagggttctcctttctctaccactttggcaggatttcctttgcctgtcttgcagctaaaagcc-------------------------attttactttatttcattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggtgcgatctcggctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctccc--gagta-gctggaattacaggcacacgccaccacgcccgactaatt---tttgtatttttagtagagacagtgtttctccatgtgggtcagactggtctcaaa s panTro4.chr19 59682216 339 + 63644993 tctccgtaatggctgtactaatttacactcctaccaatagggtaccagggttctcctttctctaccaccttgccagcatttgttttgcctgtcttgcagctaaaagcc-------------------------attttattttatttcattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctccc--gagta-gctggaattacaggcacactccaccacgcccgactaatt---ttcgtatttttagtagagacagcgtttctccatgtgggtcagactggtctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56616585 370 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcattactttggcctgtcttgcagctaaaagccattttattttattttattttattttattttattttattttattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcacgatctcagctcaccgcaacctccacctcccaggttccagtgattctcctgcctcagcctccctgaaataggctgggattacaggcacatgcaaccacgcccggcctatttaattggtatttttggtagagacagtgtttctccatgtgggtcaggctggtctcaaa i ponAbe2.chr19 C 0 I 21266 s nomLeu3.chr10_GL398297_2_random 17796 363 - 21488 tctccgtaatggctgtactgatttacactccttccaacagggtaccagggttctcctttctctaccaccttgccagcatttgttttgcctgtcttgcagctaaaagccattttattttattttattttattttattttattttatttta-tttattttaagatggagttttgctcttgtcacccaggctggagtgcagtggcgcgatcttggctcaccgcaacctccatctcccaggttcaagtgattctcctgccttagcctccc--aagta-gctggaattacaggcacacgccaccacgcgcggctaatt---tttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47717415 363 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagccattttattttattttattttattttattttattttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctccc--aaata-gctggaattacaggaatgtgccaccacgcccagcttatt---tttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaa i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=14426.000000 s hg38.chr19_GL949748v2_alt 744934 18 + 1064304 ctcccgaccttatgagat s panTro4.chr19 59682555 18 + 63644993 ctcccgaccttatgagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638221 18 + 60714840 ctcccgacctcaggagat i ponAbe2.chr19 I 21266 C 0 s nomLeu3.chr10_GL398297_2_random 18159 18 - 21488 ctcccgacctcaggagat i nomLeu3.chr10_GL398297_2_random C 0 T 15751 s papAnu2.chr19 47717778 18 + 51301725 ctcccgacctcaggtgat i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=132028.000000 s hg38.chr19_GL949748v2_alt 744952 161 + 1064304 tcacccacctcaggctctcaaagatctaggatgacagacgtgagccaccacgcccggcctaaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgatactgagcagtttttcgtatgtggggaaat s panTro4.chr19 59682573 161 + 63644993 tcgcccacctcgggctctcaaagttctaggatgacagacgtgagccacctcgcccggcataaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgacactgagcactttttcgtatgccaggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638239 161 + 60714840 tcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcctaaaagccattttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctgatgatgagtgatactgagcacttcttcatatgcggggaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2426 160 - 21488 ttgcccacctc-ggctctcaaagatctaggatgacagatgtgagccaccacgcccggcctaaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcatttctctgatgatgagtgatactgagcactttttcatatgcagggaaat i nomLeu3.chr10_GL398297_2_random T 15751 C 0 s papAnu2.chr19 47717796 161 + 51301725 tcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcctaaaagccattttaatgggGTGAGATGACAACTCactttgattttaatttgcatttttctaatgataagtgatactgagcactttttcatatgcggGGAAAT i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=94524.000000 s hg38.chr19_GL949748v2_alt 745113 78 + 1064304 ttcatgtcttttgctcctgtttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttatta s panTro4.chr19 59682734 78 + 63644993 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638400 78 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttatta i ponAbe2.chr19 C 0 T 20896 s nomLeu3.chr10_GL398297_2_random 2586 78 - 21488 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttctttgagcttcttatatttctagttatta i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47717957 77 + 51301725 TTCAGGTCTTCTGCTC-CTTTTTAATTAAATCATTTGTTTTATTGAGTTGTTTAAGCTTCTTATATTTCTAGTTATTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47438920 78 + 50890351 ttcatgtcttttgctcattttttagttaaattctttgttttattgagttatgtgagcttcttatatttctagttataa i chlSab2.chr6 I 42340 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=292216.000000 s hg38.chr19_GL949748v2_alt 745191 249 + 1064304 atcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttt-atttttagcggtgcagaagttgcttagcttgaggtaatcccaatggtcta-tttttgcttcgattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcaggccttagactcacatc s panTro4.chr19 59682812 249 + 63644993 atcccgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttt-atttttagcggtgcagaagttgcttagtttgaggtaatcccaatggtcta-tttttgcttggattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcacaggttcaggccttagactcacatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617582 250 + 60714840 atcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgcgttgtttcttcacgttgttggttt-atctttagtggcacagaagttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatc i ponAbe2.chr19 T 20896 C 0 s nomLeu3.chr10_GL398297_2_random 2664 250 - 21488 atcttgtctcagatgcatagtttgcatgtatttgctcccaatctgtgggttgtctcttcactttgttggttt-atctttagcagtgcagaagttgcttagtttgatgtaaccccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacatgtctcataggttcaggccttagactcacatc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47718034 249 + 51301725 ATCCTgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtta-ATGTTTAGTGGTGCAGAAGCTgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgtttttaaggttttaaacAAAATGTCTTTCCTCGGACAAATGTCCTGGAGCATTTCCCCAAGACTTTCTTCTACGTGTTTCATAGGTTCA-GCCTTAAACTCgcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47438998 251 + 50890351 atcccgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttatttgttttgcagtgcagaagctgcttagtttgatataatccctgtggtctgttttttgctttgattacttgtgtttttgaagtattaaacaaaatgtcttttctcagacaaatgtcctgaagcatttccctaatatttccttctacaaatttcataggttcaggacttagactcatgta i chlSab2.chr6 C 0 T 42351 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=16638.000000 s hg38.chr19_GL949748v2_alt 745440 19 + 1064304 tttaatccattttcatttg s panTro4.chr19 59683061 19 + 63644993 tttaatctactttcatttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617832 19 + 60714840 tttaatccattttcatttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2914 19 - 21488 tttaatccattttcatttg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47718283 19 + 51301725 tttaatccattttcatttg i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47439249 42351 + 50890351 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=374862.000000 s hg38.chr19_GL949748v2_alt 745459 301 + 1064304 a-tttttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggctgggcatggtgactgacacctgcaatttcagcactttgggagcccaaggcgggtggatcacctgaggccaggagttcaagattagtctggccgacgtgatgaaacattgtctccactaaaaatatataaattagctgagcatggtggtcagcacctat s panTro4.chr19 59683080 301 + 63644993 a-tttttgtctgtggtgacaggtagcggtgcagtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggctgggcatggtggctaacacctgcaacttcagcactttgggaggccaaggcgggtggatcacctgaggccaggagtacaagattagtctggccgatgtgatgaaacatcgtctccactaaaaatataaaaaatagctgagcatggtggtcagcacctgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617851 301 + 60714840 a-tttttgtgtatggtgacaggtagaggtgcagtttcattcttctgcatgtagatgtccaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggctgggcatggtggctaacacctgcaattgcagcattttgggagaccgaggcaggtggatcacttgaggccaggagttcaagatcagcctggccaacatggtgaaacgttgtctctactaaaaatacaaaagttagctgagcatggtggtcagcacctgt i ponAbe2.chr19 C 0 I 4516 s nomLeu3.chr10_GL398297_2_random 2933 302 - 21488 attttttgtgtatggtgacaggtagaggtgcagtttcattcctatgcatgtagatatccagttttccccgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggctgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcgggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaattagctgagcatggtggtcagcacctgt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47718302 301 + 51301725 a-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcaCGGTTTACTAAAAAGTCTGTCCTTTCCTGATTGTaagttcttggcacctttgtcaaagtCCATcggatgggctgggcatggtggttcacacctgcaattccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctgtactaagaatacaaaaattagctgagcatggtggtcaGCGCCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47396898 301 + 50890351 a-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcacagtttattaaaaagtctgtcctttcctgattgtaagttcttggcacctttgtcaaagtccatcagatggactgggcatggtggttcacacctgcaattccagcactttgggaggctgaggcaggtggatcacctgaggcctggagttcaagatcagcctggccatcatggtgaaacatcgtctgtactaaaaatacaaaaattagctgagcatggtggtcggcgcctgt i chlSab2.chr6 T 42351 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=1301462.000000 s hg38.chr19_GL949748v2_alt 745760 1035 + 1064304 aataccactactcaggagtttgaggccagagaattgattgaacccaggaggctgtggtggcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactccatctcaaaag----aaaaaagaaaaaaacattggatgtaaatgcatggattatatttgtgttgttcattctgctccattgttctatgtgcctttcttcatgccaacatcatgctgtcttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAATGGGCGTCACATACAAAAATTATGGAAAAAAGGATCCCAGGACTCCCAGGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCTAAAACCGGTGAGTACAGAACCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTAGAAACCTTCGATGCAGGCATTGACTCAGCATCTCGCAGCTCTGACATTGTACGCCTGTCTTCTACCATCTCCGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACCTAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAACAGCCTTGCCGTAACAGAGAACGGAGCTCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCT s panTro4.chr19 59683381 1034 + 63644993 aataccactactcaggagtttgaggcaagagaattgattgaactcaggaggctgaggttgcagtgaaccgagattgcacctctgcattccagcctgggtgacagagtgagactccatctcaaaag----aaaaaataaaaaaa-attggatgtaaatgcatagattatatctgtgttcttcattctgctccgttgttctatgtgcctttctttatgccaacatcatgctgttttgcttactacagctctgtaacatatcttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATACAAAACTTATGGAAAAAAGGATCCCAGGACTCCCAGGGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCACTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGGACCCTCTTATATCCACTTTTGGAACCCTGGGAAGGTGGAAACCTTGGATTGAGGCGTTGACTCAGCATCTCACAGCTCTGACATTGTACGCCTGTCTTCTACCATCTCCGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGCTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATAAAGCAACCCAGGCTGACTCAGCAGAGCAAGAGCCTTGCCATAACAGAGAACAGAGCTCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56622668 1036 + 60714840 aataccactactcaagggtttgaggtgagagaattgattgaacccaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagtgagactccatctgaaaag----aaaaaataaaaaaCCAttggatgttaatgcatggattatatctgttttcttcattctgctccattgttctatgtgcctttctttatgccaacgtcgtgctgttttgcttactacagctctagaatgtatttttagatcaggtagtgtgatgctcctgttttctctttataccttgaagtctcaagaCAGTGGGTGTCACATATAAAAATTATGGGAAAAAGGATCCCAGGACTCCCAGAGCCCAATATCAGATAACAGAGTGTTGGCCATGAACCTACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTTGTGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACGGAACCAAGCTCCAAAATCGGTGAGTACAGAACCCTCTTATATCTGCCTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGACTCAGCATCTCACAGCTCTGACATTGTGCACCTGTCTTCCACCATCTCCAAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAACTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGACAAAAATGCAATATTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTGCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCCGAAGAGAAAGAGCCTTGCCGTAACAGAGAACAGAGCTCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCT i ponAbe2.chr19 I 4516 C 0 s nomLeu3.chr10_GL398297_2_random 3235 1036 - 21488 aataccactactcgggagtttgaggcgagagaattgattgaacccaggaggctgagtttacagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactctatctcaaaag----aaaaaataaaaaaccattagatgtaaatgcgtggattatatctgtgttattcattctgctccattgttctatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACATATAAAAACTATGGAAAAAAGGATCCCAGGACTCCCCAGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACTCTCATTTCCTCACCTCTCTCCTGTCTCGTGTTCTAGGAAACCCTTCAAACAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAACCCTCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATGCAGGCGTTGACTCAGCATCCCACAGCTCTGACATCGTGTGCCTGTCTTCAACCATCTCTGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGGAAAAAATGCAGTGTTTGTTCTGCCTTCATTCCAAACTGGAGGATAAATTCCTGAGGGCTTGAGAGAGGGAAGAGAAGGGAACATCTGACGAGGGAGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACACAGAACAGAGCTCATGCACGTACACTTCGACTCACTGACTCATTCGGCCGCGGCCCCATGTT i nomLeu3.chr10_GL398297_2_random C 0 I 15604 s papAnu2.chr19 47718603 1036 + 51301725 AATACCactactcaggagtttgaggcaaaagaattgattgaacctaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagattccatctcaaaagag--gaaaaaaaaaaaaccattggaTGTAAATGCATGGATTATATCTGTGTTCTTCATTCTGctccattgttctatgtgcctTTCTTTATGccaatgccatgctgttttgcttactacaGCTCTGTAACATATTTTTAGATCAGGTAGAGTGAcgctcctgttttctttttatacctTGAACTCTCAAGACAGTGGGCATCACATACAAACATTATGGAGAAAAAGATCCCAGGATTCCCAGGGCCCAATATTAAATAACAGAGTGTTGGCCATGAACCAACCTCAAATATTTCCATTGAGTAGAGGACAGGCAGCCtcatttcctcacctctctccttTCTTGTGTTCTAGGGAACCCTTCAAATGGTTGGCCTTCACCCACTGAACCAAGTTCCAAAACTGGTGAGTACAGAACCCTCTTATATCTGCTTTTGGAAACCTGGGGAGATGGAAGCCTTGGATTCAGGCGTTGACTCAGCATCTCGCAGCTCTGACATTGTGCGCCTGTCTTCCACCATCTCTGAACTCCAGACACTCCAACAGTGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTAATTTTATGGAGATGAGACCTCCTACAAGCTAGAAGAATGACTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAGTGCTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTtgacagagggaagggaagggaacatcTGATGAGGGCGAGGGGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGAAAAACCCTTG-AATAACAGAGAACAGAGCTCATGCACGCACACTTCAACTCACTGACTCATTCAGCCATGGCCCCATGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47397199 1038 + 50890351 aataccactactcaggagtttgaggcaaaagaattgattgaacccaggaggctgaggttgcagtgaactgagattgcacctctgtactccagcccgggtgacagagcgagattctatctcaaaagagaaaaaaaaaaaaaaaccattggatgtaaatgtatggattatatctgtgttcttcattctgctccgttgttctatgtgcctttctttatgccaatgccatgctgttttgcttactatagctctgtaacatatttttagatcaggtagagtgacgctcctgtgttctttttATACCTTGAACTCTCAAGACAGTGGGCGTCACATACAATCATTATGGAGAAAAGGATCCCAGGATTCCCAGGGCCCAATATTAAATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACATGTAGCCTCATTTCCTCACCTCTCTCCTTTCTCGTGTTCTAGGAAACCCTTCAAATGGTTGGCCTTCACCCACTGAACCAAGTTCCAAAACTGGTGAGTACAGAACCCTCTTATATCTGCTTTTGGGAACCTGGGGAGTTGGAAGCCTTGGATTCAGGCGTTGACTCAGCATCTCGCAACTCTGACATTGTGCGCCTGTCTTCCACTATCTCCGAACTGCAGATACTCCAACAGTGAAAGGGATCTGGGCCCAACACAGGGCTCAGTTAAATCTCTTAATCTCTAGTTTTATGGAGATGAGCCCTCCTACAAGTTAGAAGAATGACTACCAATCTGACATCCTTCTCAGG-AAAAATGCAGTGCTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCT-GGGGCTTGACAGAGGGAAGGGAAGGGAACATCTGATGAGGGCAAGGGGTTTTAGAGAAGCTCCACTTGTCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAACAGAGAACAGAGCTCATGCATGCACACTTCAACTCACTGACTCATTCAGTCATGGCCCCATGCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=1833233.000000 s hg38.chr19_GL949748v2_alt 746795 1583 + 1064304 CAGGCTGTGCAGTGCGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttttttaattatcttacagtgctgtagctcaaagtaggaagtgcatcttactgggctaaaatcaaggtgacagcaaggctgccttccctctgaggattccaggcaagaatctgcttctcacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaaacccacaaagactggtcacatctcacatggcatcactcagtgccttcttccttaccacacctctttctctgaatgctgctctcccttcttccttatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccctcataatctcctggaaatcatccaggatacccttgttttaagttcagctgattagcaaccgtaattccatctacaatcttcattcctcctttccatgtaaaataacatattcacaaggtatggaggctaggacagggaca-ttttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCCCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGATCTATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAttt-tttgtttgttctt----------------ttgtttattgagacagagttgccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcttctcctggattcaagtgattctcctgcctccgcctctcgagtagctgggattacaggcaactgccaccgtgcccggctaattctttttgtatattttttgtagagaggatgtttcaccacgttggccaagcttgtctgaaactcccaacctcaagtgatccgaccgtctcagcatgccaaagtaatgggactacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATGATTTCAGGTGACAAAGAAGGTCTCACTATTCAGATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTGCACACACAGCTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTTC-CTCAAATGCTGGGAATGATGTGGGGAGAATGACAAGATGACTGTGGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGG-TAGCCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAAGGGAGGCTCAGTTGCATAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTGCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGTAGATGGATATAAGATAGGTTTGTGAGGTAGAATCATTGACTGGAAAGGCTTGCTGGGTTTGATTTTCC s panTro4.chr19 59684415 1585 + 63644993 CAGGTTGTGCAGTGTGGAACCTtttcctattgttgccataagaaatttccacaagattcgtgggtgaaaacaaaactgttatttaattatcttacagtgctgtagctcaaagtatgaagtgcatctcaccgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtccctgcttctaaaggctccca-gttccttggctcctgatccccttcctccttcctcaaaacccacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgctctcccttcttactcatcttttgaaaacttggggattctattggtttcaccaagatgaaaatccatcataatctcccggaaatcattcaggatacccttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaagtaacatattcacaagctatggaggctaggacagggaca-ttttggggtgcgaccgcattctcctgccttccacaAACAGTGAACAAGACGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCCTGAAATCTAtttgtttgtttgttctt----------------ttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcagcctgcacctcctgcattcaagtgattctcctgcctcagcctctcgagtagctgggattataggcaactgccaccatgcctggctaattcattttgtatattttttgtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtatgattttgggtgacagagaaggtctcactaatcagatatttgtgacattaatgaaaaacacgaattgaacccctgaaagattggcggaaggattttccacacacagctgtcagctgtgaaggcagaaagctgaaaacaatctgatgttgaaggaagaggctctgc-ctgaaatgctgggaatgagatggggagaatgacaagacgactgtagggagacagagagcACATTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGACACTCGCAGCCATTGGATTCACCTCGGGG-TAACCAGGAATCCCTACATGATTAACAGTGACTGACATGAAAATAAGGGAGGCCCAGGCGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTTGACACTAAGTGGATGAAGCAGATGGATATTAGCTATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56623704 1583 + 60714840 CAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatggttttttaattatctaaaagtgctgtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggcggccttccctctgaaggttccaggcaagaatctgcatctcacttgtcccagcttctaaaggctcccatgttccttggctcccggtccccttcctccttcctcaaaacccacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgcttacccttcttcctcatcttttgaaaacttggggattctatcgggttcaccaagatgaaaatccaccataatctcccggaaatcatccaggataccctggttttaacttcagctgattagcaaccataattccatctgcaatcttcattcctactttccatgtaaaataacatattcacaagctatggaggctaggacaggaaca-ttttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTGAAATGGGAGGGCAGAAAATGAACGCACAAGTGGACCAATAAATGAATGATCCATTTGGAAGCGTCTGTGCATGAAATCTA----tttgtttgtttct----------------ttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaactgccaccacgcccggctaattcttattgtatattttttgtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagttatccaaccgtctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAGGTCTCACTAATCAGATATTTATGACATTAATCAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGCATTCAAATGCTGGGAATGAGTTGGGGAGAATGACGAGATGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 19875 1582 - 21488 CAGGCTGTGCAGTAGGGA--CCtttcctattg-tgccataacaaa-ttccacaagattcatgggtg-aaacaaaacagttatttaa-tatcttacagtggggtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttcccactgagggttccaggcgagaatctgcttctcacttttcccagcttctagaagctcccacattccttggctcctggtccccttcctccttcctcaaagcccaaaaaggctggtcacaactcacatggcatcactcagacccttcttccttaccacacctctttctcggaatgctgctctcccttcttccccttcttttgaaaacttggggattctattgggttcaccaagataaaaatccatcataatctcctggaaatcatccaggatacccttattttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcccccttt-catgtaaaataacatattcacaagctatggagatgaggacatggacatttttggggTTGGGTGGCATTCT----TCTTCCACAAATAGTAAACAAGATGCATTTGGCCTCTGTTTTTGGGACACTGCTATTGCGGGTGGTTAAATGGGAGGACAGAAAATGTATGCACAAGTGGACCAATAAACAAATGATCCATTGAGAAGCATCTGTGCATGAAatctatttgtttatttatttgtttacttacttactaacttatttattgagacggagtag-cataaatcatacaggagcgagtgcagtggcatgatctcagttcactgcaacctccacctcataggtggaagtgatt-tcctccatcagcctctccagtagctgggattacagacaacca-cagcatgcctg--ctactctttttgcatagtttctgtagagaggatgtttcaccatgttgtccgggctggtctcaaactcccaatctcaagtgatcaaacagcctctgcctcccaacgcactgggataagaggcatgagccacagggccgagccAAATTTTCAAATCAATAATAGATAATGTTGAGTGTATAATTTTAGGTGACAGAGAGGGTCTCACTAATCACATATTTGTGATGTTAATGAAAAAAATGGATTCAACCCATGGAAGACTGGTGGAAGGATTTTC--CACACAACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC-CTGAAATGCTGGGAATGAGATGGGGAGAATGGCAAGTTGACTGTAGAGAGATGGAGAGCACACTGGGTACATAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACT--CAGCCGTTGGACACACCTCGGGGCTAACTGGGAATCCCTACATGATTAATAGTGACTGACATGAAAATCAGGGAGGCCCAGGTGCGTAACTGGAATTTAGGAGACCGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACATTAAATGAATGAA--AGATGGACACAAGATGTGTTTGTGAGATAGAGTAATTTGCAGGGAGGGCTTGTCTAGTTTGATTTTTC i nomLeu3.chr10_GL398297_2_random I 15604 N 0 s papAnu2.chr19 47719639 1573 + 51301725 CAGGCTGTGCAGT-TGGAATCCTTTCCTACTGTTGCCATAACAAATTTCCACAAGATTCGTGGGTGAAAACAAAACGGTTTTTTAATTATCTTACAGTGCTGTAGCTCAAAGGATGAAATGCATCTTACTCGGCTAAAATC-AGGTGACAGCAAGCCTGCCTTCCTTCTGAAGGTTCCAGGCAAGAATTTGCTTCTCACTTGTCCCAGCTTCTAAAGGctcccacattccttggctcctggtgcccttcctccttcctcaaaACCCACAAAGACTggtcacatctcacatggcatTACTCAGACCCTTCTTCCTTACCACACTTCTTTCTCTGAATGCTGCTCtcccttcttcttcatttttggaaAACTCGGGGATTCTATTGGGTTCACCAAGATGAAAATCCATCATAATGTCCCTGAAATCATCCAGGATACCCTTGTCTTAAgttcagctgattagcaaccgtAATTCTGTCTGCAATCGTCATTCCTCCTTTCCGTGTAAAATAACGTATTCACAAGCTATGGAGGCTAGGACAGGGACA-TTTTGGAGTGggacagcattctcctgccttccaTAAACAGGAAACAAGATGCATTTGGCCTCTACTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCA------GAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCAAGAAATCTA----TTTGCTTGTTCGT----------------TTGTTTAtcaagacggagtctccctctgtcttccaggctacagtgcagtggcacgatctctgctcactgcaacctgtgcctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaaccactaccacgcccggctaattctttttgtatattttttgtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccagcctcaagtgatctgaccgtctcaggctcccaaagtactgggattgcaggtgtgagccactgtgcccagccagaatttaaaataaataatggataATGCTGAGTGTATAATTTTGGGTGACAGAGAAGGTCTCACTAATCGGATATTTGtgacattaatgaaaaaaatggatTGAATCCCTGAAAGACTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCTTGAAGGCACAAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGAAACGCTGGGAATGGGATGGGGAGAATTACAAGACcactggagagaga-ggagagcacACTGGGCACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGTGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATACAGGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCACTGGGTTTGATTTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47398237 1575 + 50890351 CAGGCTCTGCAGT-TGGAATCCtttcctactgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatggttttttaactatcttacagtgctgtagctcaaagaatgaaatgcatctcactgggccaaaatc-aggtgacagcaaggctgccttccttctgaaggttccaggcaagaatttgcttctcacttgtcccagcttctaaaggctcccacattccttggctcctggtgcccttcctccttcctcaaaactcacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccagacttctttccgtgaatgctgctcttccttcttcttcatctttggaaaacttgggaattctattgggttcaccaagatgaaaatccatcataatctccctgaaatcatccaggatacccttgtcttaagttcagctgattagcaaccgtaattctgtctgcaatcgtcattcctcctttccgtgtaaaataacgtattcacaagctatggaggctaggacagggaca-ttttggagtgggacagcattctcctgccttccataAACAGGAAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTCAAATGGGAGGGCAGAAAATGAAGGCACAAGTGGACCAATAAATGAATGATCCATTGGAAAGCATCTGTGCAAGAAATCTA----TTTGCTTGTTCGt----------------ttgtttatcgagacggagtctccctctgtcttccaggctacagtgcagtggcaagatctcggctcactgcaacctgtgcctcctggattcaagtgattctcctgcctcagcctctcgagtagatgggattacaggcaaccactaccacacccggctaattctgtttgcatattttttgtagagaggatgttttaccatgttggccaagcttgtctgaaactcccaacctcaagtgatctgaccgtctcagcctcccaaagtactgggattacaggtgtgagccactgtgcccagccAGAATTTAAAATAAATAATAGATAATGCTGAGTATATAATTTTGGGTGACAG---AGGTCTCTCTAATCGGATATTTGTGACATTAATGAAAAAAATGGATTGAATCCCTGAAAGACTGGCAGAAGGATTTTCCACACACAGCTGTCAGCCTTGAAGGCACAAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCCCTGC-CTGAAACGCTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTTTTACACTCACAGCCATTATATTCACCTCAGCG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACCGTGGAAAACGCGATTCCCGCCCCACTGGTGAAACGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCGCTGGGTTTGATTTTCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=3220589.000000 s hg38.chr19_GL949748v2_alt 748378 4109 + 1064304 TACTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGAGACCT-ATTATAGCATAATATACAAGTCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaaggcgggtggatcacatgaagtcagcagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaacacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggaggttgcatcactgcactccagcctgggtggcacaaggagactccgtctcaaaaaataaaaataagaaaTGCATAAATATAAATATAATATAACACACGCAAATGACAAAGGGACCTGAATTCCAATCATGATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGTCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATCACAAA-AAAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTACTTCCA--ATCACCTGTGGAGATTCAGGTAGACCATGGGGAGGTAAACATTAACACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGACAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAATATGTGTCTCCCGAGATCACAAAGAGCAGCAGGTTTCACACGGGCTTCAACACTATTTCCTGGCCGTTTGACATAAGAGAATTCTATTTCGCTTTTTTTA-TCTTGATTTCACTTTTGTTTTCTTTCCTTGGAGAATGCAAGTTGTTTGATTCAAGAATGCTGTGGATGTAGAAACCCTAAAGCACATTCGCTGTGAATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacgttacataggcaggttcattactaacagataagcagcgagtgacaacagaaacctatatttcaatgtgagccagtccctcaaggctcagaaaagctcctcgggacatatgga-gtcaccccatttgcagtgtagctgcggg-aagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcc---aggaagaacaggaagacagcccagggtgttctgagacgttcctcctgatctcaggaagttgctgtcttaggccatttttgttgctctaaaggaacacttgagcctcggtaacttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttctcgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagtgatggagcttccaagctctttttaacaaccagctctccgggaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatgtgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccacagtgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtcgtatcctcagcacgttctatggttactatgagagctataactgaaaaagcaggagaaagctgggtctcctgccatctgggtgcttgtcctAAAGAGATGTTTTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTAAGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCCGACACCTGCACATTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctc---ttctttctcctTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACAAACAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGCAGGACTTTCTAGAGAGGGCACCAGACTCCCTGCCCCTGCCTTCAACTCACAGACCGTTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGCCACCTATGGTCTCCCCCTGTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCCGTCTCCTACAGATGCTGCGGTAATGGACCAAGAGTCTGCAGGGAACAGAACAGCGAATAGCGAGGTAGGTACTCCTCGGCCCGGGCTCGTGG--CTACTGTTATTCCCAAAGAGTCCTGGAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACACACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATATCATCGTGTACACGGAACTTCCAAATGCTGAGTCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGAGGGCGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACAAATCTGAATGTGCCTCTCACTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAAAAAACACACTCCTTTGCTTAGCCCACAGTTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttaga--------------------cacgtgttgttccaccttccctcatgctgttccacctcccctcagactagctttcagtcttctgtcagcagtaaaacttatata-t---tttttaaaataacttcaatgtagttttccatccttcaaataaacatgtctgcccccatgg-tttcggtaatgggactcttttcttgcctaaggcttccggtgttatcagtaccatgtccatataatcccatctgttccccactgagttctcatccccggactctgagtttctggaagcagggtggagcctca-tttgtctctgagactccaatttccatccaaagatgtagcacataggaggTTCCAAGGATCACGAATCATATGAACAAGTGATACTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACAATGAAACATTTGTAGAATCATAGGCCTTGTTAGTCTCATCTCCATGGGGACACATATCAACACATCATCTTTCATaatataaatatacggtcactcctccatatctgcggggtttacaggtgtttattgaaccaagtataaatcaaaaatattgagagaaagtatccacagagtttcaaaaagcataactatgttgaatggacacaaatgaagctgtgtgtaggctgtatcaggaattataagtaatctagagatgatttcatgtatacaggagg s panTro4.chr19 59686000 4107 + 63644993 TAGATGTTTAATCCTCACTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGAGACCT-ACTATAGCATAATATACAAGTCTGTGAAcggtggctcatgcttgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttccggaccagcctggccaacatggtgaaaccctatctctactaaaaatgcaaaaattagccgagcatggtggtgcatccctgtaaccccagctcctattctggaggatgaagcaggagaatgacttcaacccaggaagtggaggttgcagtgagtggagtttgcatcactgcactccagcctgggtgacacaaggagactccatctcaaaaaataaaaataagaaaTGCATAAATATAA------TAAAACACACACGAATGACAAAGGCACCTGAATTCCCATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCTATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATTGCAAACAAAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTAATTCCA--ATCACCTGTGGATATTCAGATAGGCCATGGGGAGGTAAACA---ATACTCCTTGGTGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAACTCCTGCTCCCCTTCCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCAAGATCACAAAGAGTAGCACGTTGCACACGGGCTTCAACACTATTTCCTGGACGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTAATCTTGATGTCACTTTTGTTTCCTTTTCTTGGAGAATACAAGTTGTTTGACTCAAGAAAGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGCTTTCCCAGAGAAGACTCTAAACACCTCCTGGACTGCACCTGGGCCTATGCCAATTCCTGTCACTCACCGTCACTC-AGGgagacagaacacacagagaacacattacacaggcaggttcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtcc-tcaaggctcagaaaagctgctcgggacatatggaagtcatcccatttgcagtgtagctggggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcttagtccatttttgttgctctaaaggaacacttgagcctgggtaacttctaaagaaaagagattgctttgcctcaccgttctgcaggctgtactggaagcacggcaccagcagctatttcttgtgatggcctcaggctgctcccattctgacagaagggaaggagggtctgtctgtgcagagaccacagagattacacatcaagagagggagcaagggg-agggggagcaatggagcttccaagctctttttaacaaccaggtctccaggaaataatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccacactgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtagtatcctcagcacgttctatggttactatgagagctataactgagaaagcaggagaaagctgggtcTCCCTCCATCTGGGTGCTTGTCCTAAAGGGGTGTTGCATGTGGTTACCTGTCAATCAAGAAATGTGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACTCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctcctcttctttctccttcATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAAAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAACACTCAGGTGTGTGTTCCTCACAGGTAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGTCTCCCCCTGTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGG--CTAGTGTTATTCCCAAAGAGTCCTGGAAAACGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCTTTCTCAGAGGCCCAAGACACCCCCAACAGACACCAGCGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGGTCCTCTAGGGAGACAACAGCCCTGTCTCAAAACTGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACcacgaatctgaacatgcctctctcttgcttacaaatgtctaaggtccccactgcctgctgcagagaaaacacactcctttgcttagcccacaattctccatttcacttgacccctgcccacctctccaacctaactggcttacttcctagt-ccacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttaga--------------------cacgtgctgttccaccttccctcatgctgttccacctcccctcagactagctTTCAGCCTTCTGTCAGCAGTAAAACttatata-tatattttttaaat---ttCAATGTAGTTTTCCCTCCTTGAAATAAACATGTCTGCCCTCATGG-TTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATCATTACTATGTCCATATAATCCCATCTGTTCTCCACCGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTCATTTTGTCTCTGGGACTCCAATTTCCATCCAAAGATGTAGCACATAGGAGGTTCCAAGGATCGCGAATCACATGAACAAGTGATATTCTTACTCTCTGCA-ACCTGGAAAGCTGGCAGAGTCATTCCAGGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCATGGGGACACATATCAACATATCATCTTTCATACTATAAATATAcggtcactcctctgtatctgtggggtttacaggtctttattgaaccaagtataaatcaaaaatattcagagaaaatatccacagagtttcaaaaagcataactatgttgaatggacacaaatgaagctgtgtgtaggctgtattaggaattataagtaatctagagatgatttcatgtatacaggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56625287 4087 + 60714840 TAGTTGTTTAATCCTAGCTTAATTAATTTCTTTCTGAGATTTATTCCTCCTACGCATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCT-ATTATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagctgagcatggtgatgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtagagattgcatcactgcactccagcctgggcgacacacggagactctgtctcaaaaaataaaaataagaaaTGCATAAATATAA------TAAAACACACACGAATGACAGAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTacttctttgatcctttatcttatccattaggcaatcaccctaaaacctcttccctatttggttttctgtgagcatgagatcatatagaaaatgtgaaagcccgctgaatcctccagcacagatcctggaacacagaaagtgctcTGTTCATAGCAAA-AAAAACTTGCCCCCTCACCCAAATCCCCCACCTCAGCCCTACTTCCA--ATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCATACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACGAAGAGTAGCACGTTTCACACGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTA-TCTTGATTTCACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacataggcaggttcattactaacacataagcagcgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctcgagacatatgga-gtcacttcatttgcactgtagctggggg-aagccaaaaagcagcccagcctgggttttgtacccaggagccacaggaagcactcagctaaaacactgcatgatgtcctcctccagggagaacaggaagacagcccaggctgttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttgcctcacagttctgcaggctgcactggaagcacggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccacagagatcacacggcaagagagggagtaagggggagggggagcgatggagcttccaagctctttttaacaaccagctctcca---------------ggaacttgctaaccccgtcg-tttggggcagcattgatctgttcatgatggatccacctccatgactcaaacaccttcccataggcccaaactcccaccctgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataactgagaaagtgggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATCAAGAGCAACGGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGATCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGGGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCAGGCAGGTGTGTGTTCCTCACTGGCAGGATAGTCCCTGGCCCAAAGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCTCTACCTTCAGCTGACAGACCAATGCGTGATTCGGAACTGTATCGTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACACAATCAATGGGATGGGAACTCAGAGCTATTCAT-GGATGGGTCCTTGAGCTCAGAGAGATTGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTACGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCACAAGTGCCCTCCGAGCTGTTTTCTTGACTTCCGTCTCCTACAGATGCTGCTGTCATGGACCAAGAGCCTGCAGGGAACAGAACTGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGG--CTACTCTTATTCCCAAACAGTCCTGAAAAATGTGAGCACCCTCTCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAACAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTTTCAGAGGCCCAAGACACCCCCAACAGATACCAGTGTGTACACGGAACTTCCAAGTGCTGAACCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTCGGGAGACAACAGGCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCATGAATCTGAACGTGCCTCTCTCTTGATTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACT-GTTTGCTTAACCCACAATTGTCCATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcggtcacactgaggaactcacagttccaaacatacaagaggctccctcttaacacggcacttaca--------------------cacgtgctgttccacctcccctcatgctgttccacctttccacagactattttccagccttctctcagcAGTGAAACTTATAAAGT---TTTTTGTGAT---TTCAATGTAGCTGTCTCCTCTTCAAATAAACATGTCTGCCCTCATTGCTTTAGGTAATGTGACACTGTATTCCCTAAAAGAAACCGCTGTTATCATTACCATGTCCACGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAACAGGGTGGAGCCTGA-TTTGTGTCTGAGACTCCAATTTCCTTCCAAACATGCAGCACATAGGAGGTTCCAAGAATCGTGAATGAGAT-AACAAGTGATATTCTTACTCTCTGCAGACCTGCAAAGCCGGCAGAGTCATTCCACAATAAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCACGAGGACACATATCAACACATCATCTTTCATACTATAAGTATAcagtcactcctctgtatctgtggggcttacaggtgtttattgaaccaagtataaatcaaaaatattcagagaaaatatccacaaactttcaaaaagcaaaactatgttgcatggacagaaatgaggtggtgtgtaggttgtatcaggaattataagtaatcaagagacgatttaatgtatacatgagg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47721212 4081 + 51301725 TAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTATTCCTCCTACACATAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTAATTACAACATAATATACAAGGCTGTGAACGGTTGCTCATGCCTCTAACCCAGCActgcaggaggccaaggcaggtggattccatgaagtcaggagttcaagaccagcctggccaacatggtgaaaccctatctctaataaaaatacaaatattagctgagcatggtggtgcatgcctgtaatcccagctcctactctggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcacatcactgcactccaacctgggtgactcaaggagactccgtctcaaagaataaaaataagacatgCATAAATATAA------TGTAACACACATGAATGACAATGGCACCTGGATTACCAtcatcatttttctatttctctataatTACTTCTTTGATCCTTTATCTTATCTATTAGGCAATCAGCCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCTTGAGATcatatagaaaatatgaaagcTCCCTGAAGCCACCAGCACAGGTCCTGGAATAGAGGAAGTGCTCTGCTCATCGCA---AAATGCTGGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCA--ATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACACTAATACTACTTGCAGTGAGTTCAGATCTTGGAATCAGAGATCAGCATCAGCACTAGCTCCTGGTCCCCTTTCCTACTAATCCACGGAAGGACAGGTTGTATTGAAGCAATAGATGGTGGAGGGCATTGTCCTTCCCCCAGCCTCTCGTGTAGAACAGCAACCTAAAATATGACTCCCAAGATCACAAA-AGTAGCACGTTTCCAACGGGCTTCAACGCTATTTCCTGGCTGTTTGACGTAAGAGAATTCTGCTTCGCGTTTTTGA-TCttgatttcacttttctttccttttcttggagAATGTAA-TTGTTTGAGTCAGGAGTGCTGTGCATGTAGAAATCCTAAAGCACATTCACTGTGCATGAATCCCAGTTCAGTCTTTCCAGAGAAGACTCTTAACACCTCCTGTACTGCACCTGGGGCTATGCCAATTCCTATCACTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACGTGACATGAGCAGGTTCATTACTAACACAAAAGCAGCAAGTGACAACTGAAGTGTATATTTCAATGTGAGCCAGTCCCTCAAGGCTCAGAAAAGCTGCTCAGGACATATAGA-ATCACCCCATATGCAGTGTATCTGGGGG-AACCCGAAAATCAGCCCAGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCA-GCTGTTCTGGGACGTTTCTCCTGATCTCACGATGctaatgtcttagtccatttttgttgctataaaagaacacTTGAGCCTGGGTAACTTCTCAAGATAAGCGATTTATTTgcctcacaattctgcaggctgtactagaagcatggcaccagcatctatTTCTTGTAATGACCTCAGGCTGCTCCCACTCtggcagaagggaaggagggtCTGTGTGTGCAGAGACCACAGAGATCACACGGCAGGAGAGGGAGCAAGGGG-AAGGGGCACAATGGAGTTTCCAAGCTCTGTTTAAAAACCAGCTCTCCAGGAACTAATAGAGGGAGAACTTGCTAACCCCGTCG-TATGGGacggcattaatctattcatgatggatccacctccatgacccaaatacGTCCCAATAGCCCCAACCTCCCACATTGGCGGTTAAATTTCAATGTGCTGTTTGAAGGGGTCAAACATCTAAACTAAAGCAGTTGTATCTTCAGCACATTCTATGGTTACTATGAGAGCTATAACTGAGAAAGCAGGAGAAAGCTGAGTCTCCCACCATGTGGGTGCACGTCCTAAAGAGACGTTGTATATGGTTACCTGACCATCAAGAAATGCGAGACAATCCATAGAGAGGAACTGCTGTGATTAGCTTCTTGTTGGTGCCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACcatcctcttcttctttctcctgcatCGCTGGCGCTCCAATGAAAAGGGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCCTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCCGGCCCAAGGCaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTTCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATTCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCTATTTATGGGATGGGTCCTTGAACTAAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACGGCCTCCCCCTGTGTGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCGTGGATATAGTCTTATTCCCTACTAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAATATTTCCCTCTCTGCAGGACCCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAACCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGTGTATACATAGAGCTTCCAGATGCTGAGCCCAGATTGAAAGTTG----------------ACCACAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTATCTCAAACCCAGCTTGCCAGCTCCAATGTACCAGCAGCTGGAATCTGAAGGCGCGACTCTACATCTTAGGGCGTCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGTTTTCCAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTGAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAATTCCAAACATACGAGAGGCTCTCTCTTAACACGGCACTTAGA--------------------CACATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAaacttataaa-t---ttttaaaaataatttctacgTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTTATGG-TTTCAGTAATGTGACTCTTTTCTTGCTGGAAGTTTCCGGTGTTATCATCGCTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGA-TTCGTCTCCAGGACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTCCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagagaaaatat--acaaagtttC-AAAAGCAAAACTATGTTGAATGGACACAAATGGAGCGGTATGTATGCTGTGTCAggaattataaataatctagagatgatttcatGTATACATGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47399812 4106 + 50890351 TAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTATTCCTCCTGCATGTAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTAATTACAACATAATATACAAGGCTGTGAAcggttgctcatgcctctaacccagcactgcaggaggccaaggcaggtggattccatgaagtcacgagttcaagaccagactggccaacatggtgaaaccctatctctaataaaaatacaaatattagctgagcatggtggtgcatgcctgtaatcccagctcctactctggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagttgagatcacatcactgcactccaacctgggtgactcaaggagactctgtctcaaagaataaaaTTAAGAAATGCATAAATATAA------TGTAACATACATGAATGACAATGGCACCTGGATTACCATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAACCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCGTGAGATCATATAGAAAATATGAAAGCTCCCTGAACCCACCAGCACAGGTCCTGGAATAGAGGAAGTGCTCTGCTCATCGCA---AAATGCTGGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATATCACCTGTGGAGATTCAGATAGACCATGGGGAAGTAAACACTAATACTCCTTAGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGGTCCCCTTTCCTACTAATCCATGGAAGGACAGGTTGTTTTGAAGCAATAGATGGTGGAGGGTATTATCCTTCCCCCAGCCTCTCGTGTAGAAGAGCAACCTAATATATGACTCCCGAGATCACAAAGAGTAGCACGTTTCCAATGGGCTTCAACGCTATTTCCTGGCTGTTTGACGTAAGAGAATTCTGCTTCGCGTTTTTGA-TCTTGATTTCACTTTTCTTTCCTTTTCTTGGAGAATGTAAGTTGTTTGAGTCAAGAGTGCTGTGCATGTAGAAATCCTAAAGCACATTCACTGTGCATGAATCCGAGTTCAGTCTTCCCAGAGAAGACTCTTAACACATCCTGTactgcacctggggctgtgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatatgtgacataagcaggttcattactaacacaaaagcagcaagtgacaactgaagggtatatttcaatgtgagccagtcccccaaggctcagaaaagctgctcaggacatataga-atcaccccatatgcagtgtatctggggg-aacccgaaaatcagcccagcctggattttgtcccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctaggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcacgacgctaatgtcttagtccatttttgttgctataaaagaacacttgagcctgggtaacttctaaagataagcgatttatttgcctcacagttccgcaggctgtactagaagcatggcaccagcatctatttcttgtaatgacctcaggctgctcccattctggcagaagggaaggagggtctgtgtgtgcagagaccagagagatcacacggcaagagagggagcaagggg-aaggggcgcaatggagcttccaagctctgtttaacaaccagctctccaggaactaatagagggagaacttgctaaccccgtcg-tatgggacagcattaatctattcatgatggatccacctccatgacccaaatatgtcccaatagccccaacctcccacattgggggttaaatttcaatgtgctgtttgaaggggtcaaacatctaaactaaagcagttgtatcttcagcacattctatggttactatgagagctataactgagaaagcaggagaaagcggggtcTCCCACCATGTGGGTGCATGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCAAGACAATCCATAGAGAGGAACTGCTATGATTAGCTACTTGTTGGTGCCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCATCCTCTTCTTCTTTCTCCTACATCGCTGGTGCTCCAACGAAAAGGGTAAGTCTCACGAAGCAGAGGCCACAGACCTCCGGGCCGAGTGGGGAATCAGGATGGGAGCACGTAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGATGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGAAATTGAGAGCTATTCATGAGATGGGTCCTTGAACTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCGGGCACCTATGGCCTCCCCCTGTGTGTTGGAGTCTGAACATGAAACGAGGACCCAGAAGTGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGGAGTGGAAAGAACAGTGAACAGGGAGGTAGGTCCTCCTCACCCCAGCCTCATGGATATAGTCTTATTCCCTAATAGTCCTGAAGAATGTGAGC-CTCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTCCACACAGGAAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGAGTGTACATAGAGCTTCCAGATGCTGAGCCCAGATCTAAAGTTG----------------ACCACAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACAAGCAGCAGGAATCTTAAGGCGTGACTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTTCCAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTAAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacaattccaaacatacgagaggctccctcttaacacggcacttagactcatgctgttccaccttccctcatgctgttccaccttccctcATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAAACTTACAAA-T---TTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGA-TTTCAGTAATGTGACTCTTTTCTTGCCGGAAGTTTCCGGTGTTATCATTACTGTGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGA-TTCGTCTCCAGGACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTCCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAACTGGCAGAGCCATTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTGTAAATACAcaggcgctcctccagacctgtgggatttacaggtgtttattaaaccaactataaatcaaaaatattcagagaaaatat--acaaagtttc-aaaagcaaaactatgttgaatggacacaaatggagcagtatgtatgctgtgtcaggaattataaataatctggagatgatttcatgtatacatgagg i chlSab2.chr6 C 0 I 75232 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=19957.000000 s hg38.chr19_GL949748v2_alt 752487 35 + 1064304 atgtgcataggttatttgcaaactctgtgccattt s panTro4.chr19 59690107 35 + 63644993 atgtgcatatgttatttgcaaactgtgttccattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629374 35 + 60714840 atgtgcatgggttatatccaaatgctgtgtcattt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47725293 35 + 51301725 ATATGCATGGGTTATATGCAATTGctatgcctttt i papAnu2.chr19 C 0 I 1228 s chlSab2.chr6 47479150 35 + 50890351 atgaggatggattatatgcaaacgctgtgccattt i chlSab2.chr6 I 75232 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=187810.000000 s hg38.chr19_GL949748v2_alt 752522 412 + 1064304 catataagaggcttgagcatctacagattttggtatctgagtggagatctcaaaaccaatcacccacgaatagtgaaggatgaccgtatatgacttttatttctcaaatttaaatataaatcataaaAAATGTAC---AACTAGATAAAAACTAAGAAGTGTTTTtata-gtgtgag-------ttagatttattttttcctaggtgtaaccaattggtttaatattatttattgagaagacattctatgccaccttaaaccacacggcagcctttgtcaactctaaagggactgtgtgtacatggatgtattttagacactg-tttctgctaaggggctctctgtgtccacactcttgatgatgctgcactttatgtagccttatagaacccttt-aaatttagtagccagagccctctaattt s panTro4.chr19 59690142 412 + 63644993 catataagaggcttgagcatctacagattttggtatctgagtggagatctcgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTAC---AACTAGATAAAAACTAAGAAGTGTTTTtata-gtgtgag-------ttagatttattttttcctaggtgtaacccattggtttaatattatttattgtgaagacattctatgccaccttaaaccacacagcagcctttgtcaactaaaaagggactgtgtgtacgcggatgtactttagacactg-tttctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttataaaacccttt-aaatttagtagccagagccctctaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629409 423 + 60714840 tatgtaagaggcttgagcatctgcagattttggtatctgagtggagatcctgaaaccaatcactcacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTACAATAACTAGATAAAAACTAAgaagtgtttttataggtgtgagaataagtgtagatttattttttcctatgtgtaaccctttggtttaatgttatttattgagaagacgttctatgccaccttagaccacacggcagcctttgtcaactataaagagactgtgtgtacaaggatgtattttagaccctg-tttctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttatagaacccttt-aaatttagtagccagagccctctaattt i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47479185 422 + 50890351 tatgtaagaggcttgagcatctgcagattgtggtatctgagcggagatcctgaaaccaatcacccacgaatagtgaagtacgactgTATCTCACTTTTATTTCTCAATTTTAAATATAAATCAAAAAAAATTTACAACAACAAGATAAAAAACAAGAAGTG-TTTtata-gtgtgagaatacgtatagatttatttttttctatgcgtaacac-ttgggcccatgttatctatggagaagacattctattcctccttaaaccacacggcagcctttgtcaactctaacgggactgtgtgtgcacggatgtattttagacactgttttccgataaggggctctctgtgttcactctcttgaggatgctgcacattacgtaggcttacacaaccccttaaaatttggtagctggagtcctctagttt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 14050 26356 + 40826 I a score=96667.000000 s hg38.chr19_GL949748v2_alt 752934 136 + 1064304 gttattATAGGCTGtttgc-----tttttt-----tttcttgaggcggagtcttgctctgtcgcccaggctggactgcagtgacacaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcgtgcctcagcctc s panTro4.chr19 59690554 139 + 63644993 gttattATAGGCTACTTGCTA--ttttttt-----tttcttgaggcggagtcttgctctgtcgcccaggctggactgtagtggtgcaatctcagctcactgcaacctccgcctcccatgttcaagcgattctcgtgcctcagcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629832 136 + 60714840 gttattATAGGCTATATGC-----tttttt-----tttcttaaggtggagtcttgctctgtcacccaggctatactgcaatggcacaatctcagctcactgcaaactccgccttccaggttcaagcaattctcatgcctcagcctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 40406 144 + 40826 TTTATTATAGGCTATTTGCTAGGCTTTTTAAAATAtttcttgaggc--agtctcactctgtcgcccaggctggactgaagtggcacgatctcagctcaccgcagcctttgcctcctgggttcaagtgattctcctgcctcagcctc i rheMac3.chrUn_JH290802 I 26356 I 244 s chlSab2.chr6 47479607 146 + 50890351 cttattataggctatttgctacgcttttttatatatttcttcaggcagagtctcgctctgtcacccaggctggactgcagtggcacaatctcggttcactgcaacttccgcctctcaggttcaagcgattctcctgcctcagcctc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e macFas5.chr19 55639339 0 + 59248254 C a score=117314.000000 s hg38.chr19_GL949748v2_alt 753070 257 + 1064304 ttgagcagctggcgttacaggtgcctgccaccaggcacggctaatttttggatttttaacagagacacggtttcactatattggccaagctgctctcaaactccttatctcagttgatccgcccacctcggcttcccaacgtgctgggGAAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAACgagggagggagagagacagacagagagCAAACTCCA-GAGTTGGGACTCTGGAA s panTro4.chr19 59690693 256 + 63644993 ttgagtagctggcatttcaggtgcctgccaccaggctcggctaatttttggatttttagcagagacacggtttcactgtgttggccaggctgctctcaatctcctcatctcagttcatccgcccacctcggcttcccaacgtgctgggG-AAACTTGATTTTCTATAGCATTATGTTCCTGGATATTTCTGTAAAATTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCA-GAGTTGGGACTCTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629968 257 + 60714840 ttgagtagctggcattacacgtgcctgccaccaggcacggctaattcttgaatttttagcagagacacggtttcactatgttggccaggctgctctcaaactcctcatctcagttgatccgcccacctcggcttcccaacgtgctgggGGAAACTAGATTTTCTATAACATTATGTTACTGGATATTTCTGTAAAGTTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCA-GAGTTGGGACTCTGGAA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47479753 258 + 50890351 ttgagtagctggcattacaggtgcccgccaccaggcatggctaatttttgtatgtttagcagagacatggcttcactaggttggccagggaggtctcgaactcccgacctctattgatccgtccacctcagcttcccaaagtgctgggggacacttgattttctataGCATTGTGTTACTGGATATTTCCATACAATTTAAAATgagggaggcagagagacagagagagagagcgaACCATGAGTTGGGGCTCTGGAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40550 244 + 40826 I a score=22623.000000 s hg38.chr19_GL949748v2_alt 753327 27 + 1064304 TCTTGGGTCATGAGACAAATTTTAGAT s panTro4.chr19 59690949 27 + 63644993 TCTTGGGTCATGAGACAAATTTTAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630225 27 + 60714840 TCTTGGGTCATGAGACAAATTTTAGAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 40794 27 + 40826 TCTTGGGTCATGAGACAAATTGTAGAT i rheMac3.chrUn_JH290802 I 244 T 26771 s chlSab2.chr6 47480011 27 + 50890351 TCTCAAGTCATGAGACAAATTGTAGAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e macFas5.chr19 55639339 0 + 59248254 C a score=58505.000000 s hg38.chr19_GL949748v2_alt 753354 120 + 1064304 TAAACTACAAAACTCCAGAATTTACAGG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAGCTGGTTCTGCTG s panTro4.chr19 59690976 120 + 63644993 AAAACTACAAAACTCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630252 120 + 60714840 AAAACTACAAAAATCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAACTTAAATCACTTTAACTGGTTCTGCTG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47480038 121 + 50890351 AAAACGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGACTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGTTCTGCTG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=36710.000000 s hg38.chr19_GL949748v2_alt 753474 64 + 1064304 TAATACTAGAAATACAAGCATGAAAAATTCTAATGGTTTATTAGTCACAATGACTCCGAAAACA s panTro4.chr19 59691096 64 + 63644993 TAATACTAGAAATACAAGCATGAACAATTCTAATGGTTTATTAGTCACAATGTCTCTGAAAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630372 64 + 60714840 TAATACTAGAAATACAAGCATGAAAAATTCTCATGGTTTATTAGTCACAATGACTCTGAAAACC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726556 62 + 51301725 TAGTACAAGAAACTCAAGCAGGAAA-ATTAGAATGACTT-TTTGTCACAATTATTCTGATAATG i papAnu2.chr19 I 1228 C 0 s chlSab2.chr6 47480159 64 + 50890351 TCATACTAGAAATACAAGCATGAAACATCCTAATGGTTTATTCATCACAATTGCCCTGACAACG i chlSab2.chr6 C 0 T 74976 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=52822.000000 s hg38.chr19_GL949748v2_alt 753538 90 + 1064304 TTAATAATACCTATTAGATACTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAAAAAAAATACATGAAAAGTCTTT s panTro4.chr19 59691160 90 + 63644993 CTAATAATACCTATTAGATATTTTGCATATTTCACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630436 67 + 60714840 TTAATAATACCTATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACA----------------------- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726618 66 + 51301725 TTAATAATACTTGTCAGATATTTTGCATATTACACATGAAGA--AGTTTgaatctcagataaaaacaa---------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405247 90 + 50890351 TTAATAATACTTGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAGTACATCAAAAGTCTTT i chlSab2.chr6 T 74976 I 20 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=2342.000000 s hg38.chr19_GL949748v2_alt 753628 27 + 1064304 CATGTTAGCACAGATTTTAGGCATCTC s panTro4.chr19 59691250 27 + 63644993 CATGTTAGCACAGATTTTAGTCATCTC i panTro4.chr19 C 0 I 43933 e ponAbe2.chr19 56630503 0 + 60714840 C e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47405337 20 + 50890351 I e papAnu2.chr19 47726684 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=0.000000 s hg38.chr19_GL949748v2_alt 753655 8 + 1064304 GTGTTCGG e ponAbe2.chr19 56630503 0 + 60714840 C e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47405337 20 + 50890351 I e papAnu2.chr19 47726684 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T e panTro4.chr19 59691277 43933 + 63644993 I a score=16941.000000 s hg38.chr19_GL949748v2_alt 753663 44 + 1064304 ATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGG s panTro4.chr19 59735210 44 + 63644993 ATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGG i panTro4.chr19 I 43933 C 0 s ponAbe2.chr19 56630503 44 + 60714840 ATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726684 42 + 51301725 -caaaagtacaTCAAAAGTCTTTAATG-TAACCCGGAATTCAAT i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47405337 20 + 50890351 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=4917.000000 s hg38.chr19_GL949748v2_alt 753707 6 + 1064304 CATCTT s panTro4.chr19 59735254 6 + 63644993 CATCTC i panTro4.chr19 C 0 T 43983 s ponAbe2.chr19 56630547 6 + 60714840 CATCTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726726 6 + 51301725 CATCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405357 6 + 50890351 CATCTT i chlSab2.chr6 I 20 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=163561.000000 s hg38.chr19_GL949748v2_alt 753713 213 + 1064304 GTGTTCGGGAGGTTGGATCTGAGACGTGTTGTGAGTTGGTCATAGTGAAGGACGTGAGGTGCC-AATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCAAGCATCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTAGTCAACATGTAAGCTGCATGGGCAGGGCGCCAAATAACAT s panTro4.chr19 59691277 214 + 63644993 ATGTTTGGGAGGTTGGATCTGAGACGTGTTTTGAGTTGGTCATAGTGAAGGACGCGAGGTGTCAAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACAT i panTro4.chr19 T 43983 C 0 s ponAbe2.chr19 56630553 213 + 60714840 GTGTTCGGGAGGTTGGATCCGAGACGTGTTTTGAGTTGGTCATAGTAAAGGACGCGAGGTGTC-AATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726732 213 + 51301725 GTGTTCGAAAGACTGGATCTGAGACGTGTTTTGAGCTGGTCATAGTGAATGAAGCAAGGTGGC-AATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCGTCATGCAAGGTAGAAACAGCCTGCGTATGTCACCCTCCCATGATGTGGTGAGCATGTCAACTGCATGGGCAGGGCGCCACATAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405363 213 + 50890351 GTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAGCTGGTCATAGTGAATGAAGCAAAGTGGC-AATTGTAGTCACAACAGTTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCACCATGCAAGGTAGAAAGAGCCTGCATACGTCACCCTCCCATGATGTGGTCAGCATGTCAACTGCATGGGCAGGGCGCCACATAACAT i chlSab2.chr6 C 0 I 74977 e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=81973.000000 s hg38.chr19_GL949748v2_alt 753926 166 + 1064304 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCTGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAAGGAATAGAGGGAGGGAGCGCGGGGATGGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGG s panTro4.chr19 59691491 166 + 63644993 CCTGTGCGCTGCTGAGCTGAGCTGGGGTGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGTGTGTGTTGGTGAGTCCTTGAAGGGAATCGAGGGAGGGAGCGCTGGGGTGGAGGTCTGGACCTGGAGGTAAAGATATGGGCCTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630766 166 + 60714840 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCTGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTATGTTGGTGAGTCCTGGAAAGGAATCAAGGGAGGGAGTGCGGGGATCGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47480553 165 + 50890351 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACTGGCAGCACCATGTCGCTCATGGTCGTCAGCGTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATTGGCGGAGGAAGCGCTGGGGTGGAGATCTGGGCCTGGA-GTGGGGATATGGGCCTGG i chlSab2.chr6 I 74977 I 134 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=573.000000 s hg38.chr19_GL949748v2_alt 754092 2 + 1064304 AG s panTro4.chr19 59691657 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630932 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47480718 134 + 50890351 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=23039.000000 s hg38.chr19_GL949748v2_alt 754094 58 + 1064304 GTGGAGTTATGGGCCTGGAGTGGAGATCTGGGCCTGGAGTGGATATATGGGCCTGGAG s panTro4.chr19 59691659 58 + 63644993 GTGGAGTTATGGTCCTGGAGTGGAGATCTGGGTCTGGAGTGGATTTATGGGCCTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630934 56 + 60714840 GTGGACTGATGGGCCTGGAGTGGAGATCTAGGCCTGGAGTGGAGATCTGGGCCTGG-- i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47480852 58 + 50890351 GTGGAGATATGGGCCTGGGCTGGAGATCTGGGCCTGGAGTGGAGATAGGATCCTGGAG i chlSab2.chr6 I 134 I 18 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=952.000000 s hg38.chr19_GL949748v2_alt 754152 20 + 1064304 ATGGAGTGATGGGCCTAGAA s panTro4.chr19 59691717 20 + 63644993 ATGGAGTGATGGGCCTAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630990 1 + 60714840 -------------------A i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47480910 18 + 50890351 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=34441.000000 s hg38.chr19_GL949748v2_alt 754172 78 + 1064304 GTGGAGATCTGGGTCTGGAGTGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATCTGGGCCTGGAG s panTro4.chr19 59691737 78 + 63644993 GTGGAGATCTGGGTCTGGAGTGGAGATATGGGCCTGGAGGTAGAGATATGGGCCTGGAGTGGAGATCTGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630991 77 + 60714840 GTGGACATCTGGGCCTGGAGTGGAGATCTGGGCCTGGA-GTAGAGTTACGGGCCTGCAGTAGAGATATGGGCCTGGAG i ponAbe2.chr19 C 0 I 16738 s chlSab2.chr6 47480928 77 + 50890351 GTAGAGATATGGGCCTGGAGTGGAGATATGGGTCTGGA-GTGGAGACATGGGTCTGGAGTGGAGATATGGTTCTGGAG i chlSab2.chr6 I 18 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=16815.000000 s hg38.chr19_GL949748v2_alt 754250 57 + 1064304 TGGAGATAGGAACCTGGAGGGGAGATATGAGCCTGGAGTGAAGATATTGGCCTGG-GA s panTro4.chr19 59691815 58 + 63644993 TGGAGATAGGAACCTGGAGGGGAGATAGGAGCCTGGAGTGGAGACATGGGCCTGGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647806 39 + 60714840 -------------------TGGAGATATGGGCCTGGGATGGAGATATGGGCCTAGAGG i ponAbe2.chr19 I 16738 T 16777 s chlSab2.chr6 47481005 57 + 50890351 AGGAGATATGAGCCTGGAGAGGAGATATGAGCCTGGGGTGGAGATATGGGTCTGGAG- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=29599.000000 s hg38.chr19_GL949748v2_alt 754307 97 + 1064304 TGGAGATATGGGCCTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTGGAGGTGGAGACATGGGCCTAGAGGTGGATATCTGGGCCTGGA s panTro4.chr19 59691873 76 + 63644993 TGGAGATATGGGCCTGTAGTAGAGTTATGGGCCAGGA---------------------GTGGAGATATGGGCCTAGAGGTGGATATCtgggcctgga i panTro4.chr19 C 0 I 43978 s ponAbe2.chr19 56631068 95 + 60714840 CGCAGATATGGGCCAGGAGTGGAGATGTGGGTCTAGAGGTGGATATCTGGGCCTGGA-GTGGAGATATGGGCCTAG-GATGGAGATATGGGTCTGGC i ponAbe2.chr19 T 16777 I 1 s chlSab2.chr6 47481062 94 + 50890351 TGCAGATATGGGCCTGGAGTGGAGATATGGGTCTGGA-GAAGAGATATGAGCCTGGA-GAGGAGATATGGGCCTGG-GGTTGAGATATGGGTCTGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=14802.000000 s hg38.chr19_GL949748v2_alt 754404 38 + 1064304 GTGGACATATGGGCCTAGGATGGAGATATGGGCCTGGG s panTro4.chr19 59735927 38 + 63644993 TTGGCGATATGGGCCTGGATTGGCGATATGGGCCTAGG i panTro4.chr19 I 43978 T 44016 s ponAbe2.chr19 56631164 38 + 60714840 GGGGAGATAtgggactggagtggagatatgggcctgaa i ponAbe2.chr19 I 1 C 0 s chlSab2.chr6 47481156 38 + 50890351 GTGGAGATATGGGCCTGGAGTGGAGATATGGGTCTGGA i chlSab2.chr6 C 0 I 95 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=0.000000 s hg38.chr19_GL949748v2_alt 754442 1 + 1064304 T e ponAbe2.chr19 56631202 0 + 60714840 C e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47481194 95 + 50890351 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T e panTro4.chr19 59735965 44016 + 63644993 T a score=347421.000000 s hg38.chr19_GL949748v2_alt 754443 861 + 1064304 GTGGAGATATGGGCTTGGGGTGGAGATATGGGCCTGGATTGGAGATATGGGTCTAGGGTGGAAATATTGGCCTGGAGTGGAGATATGGGCCTGGAGTggagatatgggcttggggtggggataggggcctggggtgcggatatgggCCT---------------------------------------------------------------------------GCAGGCTGGGTCTCTACACAGCCGACAGCCCTGTTCTTGGGTGCAGGCTGGCACTGAGGGTGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGT-CCTGGTTTGCCTGCAGATGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGACACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGAGGAGACCCTGGGGTGCTCAGCCCACAGTTCCGACCTTGCCCTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCCTCCAAGCTGGGCTGTGCGGCTGGGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCT-CAGAGGTGGGGGAACCCCAGCCAGGGCCCTGACCTTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGATATTCCATTCACAAAGAACATGCCCTCGACTCCATGTCTA s panTro4.chr19 59691949 861 + 63644993 gtggagatatgggcttggggtggaggtatgggcctggattggagatatgggcctagggtggaaatatcagcctggagtggatatatgggcctggagtggagatatgggcttggggtggggatatgggcttggggtgtggatatgggcct---------------------------------------------------------------------------ggaggctgggTCTCTGCACAGCTGACAGCCCTGTTCTTGGGTGCAGGCAGGCACTGAGGGTGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTGCAGATGGATGGTCCATCACGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAAGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGACGAGACCCTGGGGTGCTCATCCCACAGTTCCGACCTTGCCGTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCATCCAAGCTGTGCTGTGCGGCGGGGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACTGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCT-AAGAGGTGGGGGAACCCCAGCCATGGCCCTGACCTTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGATATTCCATTCACAAAGAACATGCCCTCGACTCCATGTCTA i panTro4.chr19 T 44016 C 0 s ponAbe2.chr19 56631202 803 + 60714840 gtggagatatgggcttggagtggagatctgggcctggggtggagatatgggcctagggtggaaatatcggcctggagtggagatatgggcctggagtggagatatgggcttgggatgg-------------------ggatatggacct---------------------------------------------------------------------------ggaggctgggTCTCTGCACAGCCAACAGCCGTGTTCTTCGGTGCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGCTGCCAAGACTCACAGCCCAGTGGGAGCAGCAAGGGAGG-CCTGATTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTC---CTCCAAACCTTAGGGTGTCATCTCCCCACAGAACAGGATTTCCCCTAAATGGGAGGGAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGCCCACAGTTCTGACCTCGCC-TCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTCTGGGGACCAG---GGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCATTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCA-GAAGAGGTGGGAAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGACGGGGGCTCCATTGTTTATTTTTGTTCAGGCATCCACTGATATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTA i ponAbe2.chr19 C 0 I 211 s chlSab2.chr6 47481289 922 + 50890351 GAGGAGATGGGAGCCTGGAGTGGACATATGGGACTGGGGTGGAGATATGAACCTGGAGTGCAGATATTAGCCTGGAGGGGAGATATGAGCCTGGAGTGGAGATATGGGCCTGGAGGGCAGATAGGAGCCTGGAGGGGAGATATGGGCCTGGAGTAGAGATATCAGCGTGGAGTGGACATGTGGGCCTGTTGTGTAGATCTAGGCCTGGGTGCAGATCTGGATCCGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGAGAGTCTCTCATAAACTAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGG---GGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGTGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGACGGTCAGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTCATGTTGGGGGCTCA-------------GTTCATGCACTGGCTGATATTCCATTCACAAGGGACATGCCCTCCATGCCGTGTCTA i chlSab2.chr6 I 95 I 1 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=91037.000000 s hg38.chr19_GL949748v2_alt 755304 200 + 1064304 TTTGTGTTGTTTTATGTGAGTAATCTTGCAGGATTAAAATCTAGTAGGAGTCCCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGAGAGACGCCAAGTCTATGCGGGGTGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAA-GTGGAAA--TGGGAGAATCTTCTGA-CAC s panTro4.chr19 59692810 204 + 63644993 TTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTGGGAGTCCCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGAGAGACGCCAAGTCTATGCGGGGTGGGTCCTTTCCGTAGCCATGGGCACCCAAGTGTGGTAGGAGCCTTAGAAACAAGGAAAGTGGGGAGAATCTTCTGAGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56632216 204 + 60714840 CTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACCTGCTCAAAGTTCTCAGCTGATACTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTTAGCCCTGGCCACCAAGGTGTGATAACAGCCATAGAAACGTGGAAAGTGAGGAGAATCTTCTGAGCAC i ponAbe2.chr19 I 211 C 0 s chlSab2.chr6 47482212 203 + 50890351 TTTGTGTTGTTTTATGTGAGTCATCTTGAAGTGTTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACCTTTGTTGTAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCTTAGAAACATGGAAAG-GGGAAGAATCTTCTGAGCAC i chlSab2.chr6 I 1 C 0 e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=200071.000000 s hg38.chr19_GL949748v2_alt 755504 361 + 1064304 GTGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGTGGCGCCTCCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCCCTGTGGTGTCTGAAGGAGAACATGTGGCTCTTCAGTGTCGCTCTCGTCTTGGGTTTAA---------CGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAGTATTCCGAAACACCGTTTTCATAGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--CGGGGTTCACACCCACACTTCCTCACTGGGTGGTCAGC---ACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59693014 361 + 63644993 TGGCAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGTGGCGCCTCCTTCTCCCCCAGGTGGACAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCCTGTGGTGCCTCGAGGAGGACATGTGACTCTTCTGTGTCGCTCTCGTCTTGGGTTTAC---------CATCTTCAGTCTGTACAAAGAAGATGGGCTGCCTGTCCCTGAGCTCTACAACAAAATATACTGGAAGAGCATCCTCATGGACCCTGTGACCCCTGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCCGCACTCCCCCATTGAGTGGTCGGC---ACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAGAGGACTCGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56632420 358 + 60714840 AGGGAGGGAGGGGCAGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTCTGGTGCCTCCAGG---ACATGTGATTCTTCGGTGTCATTCTTATCTTAGGTTTAA---------CAACTTCAGTCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCTCTGTGACCCCAGCACATGCAGGGACCTATAGACGC--TGGTGTTCACACCCACACTCCCCCAGTGGGTGGTCAGC---ATCCAGCAACCCCCTGGTCATCATGGTCACAGTTCACAGGGCTCCTGTC i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47482415 370 + 50890351 AGGGAGGGAGGGGTGGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAAGCCACGTTCCCATCTTCCACAGCAGAATATTCCAGCAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGC---ACACAGTGATCCCCTGGTGATCAGGGTCACAGGTCAGCGGGCTCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770061 356 + 49145316 GTGGCGGGTGGGG-GGCTCCACACTCCCCTCTCT-AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGT---------CACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCACA-CTGGCCGTTCC--AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 T 2969 I 914 e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=250942.000000 s hg38.chr19_GL949748v2_alt 755865 625 + 1064304 TGGGATTCTCCTTGTCCCACCTCCTGAGTCCCAGAGCTTCTGGTGGGAGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAAGGGGATTGAATACAGGGAAATGGGTGCtgtggtggaaagaataattgtccccaatgatgactgcattctaatccctgcagtctgtgactatttatgttataggggaaggcactgaaggggaagatggagctcaggttgt---tgagttgaccttgagatggggagacagcctggactgtcctgctgggctcagtgtaatcacaagggtgcac-atgagaggagaaggaagaggggagtggcgattagagcagtgcaatggaagt----ctccatca----------gctttgaaggtggaggaaggccatgagccat-gaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattctcctgggtctccagagggaacgcagccctgcagatgccttgattttagccctcaaaaaacagggtccgatttctgtctccagaaacggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttctacagcaccaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAG s panTro4.chr19 59693375 627 + 63644993 TGGGCTTCTCCTTGTCCCACTTCCTGAATACCAGAGCTTCTGGTGGGGGTGTCCACCAGGGTCCAATCATCCAGGCCCTGACTGTATTTGGTGTCAATggggattgaatacaggggaatgggtgctgtggtgggaagagtaactgtcggcagc-atggctatattgtaatccttggagcctgtgactatttatgttataggacaggggactgaaggggaagatggagttcaggttgttgatgagttgaccttgagatggggagatgacctggactctcccactgggctcagtgtaatcacaagggtccac-gtgagaggaggaggaagaggagagtggggattagagcagcgtagtgggagggagactccaccagccactgtgggctttgaaagtggaggaaggccagaagccacggaatgcaggtggcttttaggggctggagaagtcaatagaactgattctcccgagtctccagagggaatgcagccctgcagatgccttgattgtagcccaggaagaacagggtctgatttctgtctccagaa---------------gtgttctctcctgccgccatgtttgtgataattttctgcagcaacaacaggaaa-caacacaggaatccaggtcaaggacaag i panTro4.chr19 C 0 I 43961 s ponAbe2.chr19 56632778 629 + 60714840 TGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatagagctcaggttgttgatgagttgaccttgagatggggagacagcttggaatgtcccggtgggctcagtgtaatcacaagggtctacaacgaaaggaggaggaagaggggagtggggattagagcagcgtaatgagagt----ctccctca----------gctttggaggtggaggaaggccgtgagccac-gaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattctcctgagtctccagagggaatgaagccctgcaggtgccttgatttcactccaggaaaaacagggtccgatttctctctctagaattggaaggagtcaatgtgctctcttctgctgccattcttctgataattttctagagcagcaacaggaaaccaacacTGGAACCCAGATCAAGGACAAG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47482785 632 + 50890351 TGGGCTTCTCCTTGTCCCAACTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTTAATACAGGGAAATGGGTGCtgtgattagaagaataactgtccccaat-atggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaagagggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaa-acgagaggaggatgacaa---gagtggggattagagcagcgtcgtgggaga----gtccatcagccactgtgggctttgaaggtggaggaa-gccacgagccac-aatgaaaggtggcctctacgggctggagaagtcaa-gagaattgctccgctgagtctccagagggaacacagttctgtagacgccttgattttagcccagggagaactggatccaatttctgcctctaaaagtggaaggggtcactgtattctctcctggcaccatgtttctgataattttctgccacagcaacaggaaaccaagacaGGAACAT-GGTCAAGGACAAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=18350.000000 s hg38.chr19_GL949748v2_alt 756490 51 + 1064304 ATAAGAAAGGACACAAGGAtagccgggcgtggtggcaggtgcatgtaatcc s panTro4.chr19 59737963 51 + 63644993 TTAAGAAACGACACAAGGAtagccaggcgtggtggcagacgcatgtaatct i panTro4.chr19 I 43961 C 0 s ponAbe2.chr19 56633407 51 + 60714840 TTAAGAaaggacacaaggatagctgggcatggtggcaggcccatgtaatcc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47483417 48 + 50890351 Ttaagaaaccaaac---gatagccgggcatggtggtgggcacgagtaaacc i chlSab2.chr6 C 0 I 13 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=6511.000000 s hg38.chr19_GL949748v2_alt 756541 28 + 1064304 tagcaactcaggaggctgagggcaggag s panTro4.chr19 59738014 28 + 63644993 tagggactcgggaggctgagggcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633458 28 + 60714840 tagtggctccggaggctgagggcaggag i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e chlSab2.chr6 47483465 13 + 50890351 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=216179.000000 s hg38.chr19_GL949748v2_alt 756569 446 + 1064304 aatcacttgaacccaggagacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgactccaaaaTTAATTAATT--------AATTAAAGAAACCAAACAAAGAGAAGGTTGGCTACACCGAGATCAGCAAGGGTGGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTTGATACTCCTCAAACCAGCACCAGAAGCCAGCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTTCTGCCAAGGATTCCAATTCGTCCAAAAGAGATTGAACCAGTCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATAGA s panTro4.chr19 59738042 446 + 63644993 aatcacttgaacccaggagacagaggttgcagtgagccgagaccacaccactttactccagcctggacgaagaattgagactctgtctccaaaaTTAATTAATT--------AATTAAagaaaccaaacaaggggaaggttggctactctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgatactcctcaaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAAGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATACA i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56633486 446 + 60714840 aaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaaaaTTAATTAATT--------AATTAAagaaaccaaacaaggggaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacagagggaggggttgatgctcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACAGTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATGCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCCGCCTATCCTGGTTCGTCTTCCACCCCTACATAGA i ponAbe2.chr19 C 0 I 1 s chlSab2.chr6 47483478 454 + 50890351 aatcgcttgaatccgggaggcagaaattgcagtgagccaagaccacaccactatactccagcctgggtgaaaaagtgacactctgtctcaaaaaTCaattaattaatcaatgaattaaagaaaccaaacaaggagaaggttggcaaccccgagatcaggaagggctagacgttgatgccaccaccaggctccatccacatagggaggggtcgatgctcctagaaccagcaccaggagccaccctgtggaagctgaggccatggagAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTCCATACCTCCTGCCAGGGACTCTAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGAAATGCAGCCTGCCGTGGTTCCTCTTCCAGCCCCACACAGA i chlSab2.chr6 I 13 I 1 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=51524.000000 s hg38.chr19_GL949748v2_alt 757015 113 + 1064304 AGCAGGAAAGACATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAATCAGGAGCTACTagagacagagggacagagaagagggaggga s panTro4.chr19 59738489 113 + 63644993 AGCAGGAAAGACATTAGTGTGAAATAGATACAACAGCCTAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCAGAGGCTACTAGAGACACAGGGACAGAGAAGAGGGAGGGA i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56633933 111 + 60714840 AGCAGGAAAGACATTAGTGTGAAATAGATACAACAGGCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCAG--GCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGAA i ponAbe2.chr19 I 1 C 0 s chlSab2.chr6 47483933 110 + 50890351 AGCAGGAAACAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTGAGCCCAGTGGGAAGGGCATCCGAGGCTACTAGAGACAGACGGACA---AAGAGGGAGGGA i chlSab2.chr6 I 1 T 78467 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47726945 0 + 51301725 C e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=62946.000000 s hg38.chr19_GL949748v2_alt 757128 82 + 1064304 gacagaTGGAAGGACCTGTACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGATAAGACA s panTro4.chr19 59738602 81 + 63644993 GACAGATGGAAGGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGAC-AGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634044 81 + 60714840 GACGGATGGAAGGACCTGCACCAGGAGATATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGAC-AGACA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726945 80 + 51301725 GACAGATGGAAGCACCTGCAACAGGGGTTATGGGCACAGAAAAGAACAcggagacacagagagggaggagagagac-agac- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405576 80 + 50890351 GACAGATGGAGGCACCTGCAACAGGGGTTATGGGCACGGAAAAGAACACagagacacagagagggaggagagagac-agaC- i chlSab2.chr6 T 78467 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55639339 0 + 59248254 C e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=4898.000000 s hg38.chr19_GL949748v2_alt 757210 4 + 1064304 CCAG s panTro4.chr19 59738683 4 + 63644993 CCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634125 4 + 60714840 CCAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55639339 4 + 59248254 CCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47727025 4 + 51301725 ccAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405656 4 + 50890351 CCGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=292180.000000 s hg38.chr19_GL949748v2_alt 757214 208 + 1064304 CGAGGGGAAGCCTCACTCATTCTAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAAGTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGG-------TCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAA s panTro4.chr19 59738687 215 + 63644993 TGAGGGGAAGCCTCACTCATTCTAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACACAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGACATCCTGCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634129 208 + 60714840 TGAGGGGAAGCCTCACTCATTCCAGTTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCCCAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGG-------TCAGATGTGGTGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55639343 208 + 59248254 GGAGGGGAAGCCTCACTGATTCCAGGTCCCATGGATGGGATGACAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACGGTCGTCCTGCAATGTTGG-------TCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGAGAGGGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47727029 208 + 51301725 GGAGGGGAAGCCTCACTGATTCCAGGTCCCATGGATGGGATGAAAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTGCAATGTTGG-------TCAGATATCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405660 208 + 50890351 GGAGGGGAAGCCTCACTGATTCCAGGTCCCATGGATGGGATGAAAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCGTCCTGTAATGTTGG-------TCAGATATCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 204 + 49145316 CGAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCAC-------TCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCA i calJac3.chr22 I 914 I 53 e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=47948.000000 s hg38.chr19_GL949748v2_alt 757422 47 + 1064304 GTTTAATGACACTTTGCGCCTCACTGGAGAGCTCCATGATGGGGTCT s panTro4.chr19 59738902 47 + 63644993 GTTTAACGACACTTTGCGCCTCATTGGAGAGCACCATGATGGGGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634337 47 + 60714840 GTTTAACGACACTTTGCGCCTCATTGGAGAGCTCCATGATGGGGTCT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55639551 46 + 59248254 CTCTGAGGACCCC-TATGCCTCGTTGGAGAGCTCCATGATGGGGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47727237 47 + 51301725 CTCTGAGGACCCCTTATGCCTCGTTGGAGAGCTCCATGATGGGGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405868 47 + 50890351 CTCTGAGGACCTCTTATGCCTCATTGGAGAGCTCCATGATGGGGGCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771535 53 + 49145316 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=201919.000000 s hg38.chr19_GL949748v2_alt 757469 145 + 1064304 CCAAGGCCAACTTCTCCATCGGTCGCATGACGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTCCTCATTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATTACAGGTGAGAGTGTCTGGAC s panTro4.chr19 59738949 145 + 63644993 CCAAGGCCAACTTCTCCATCGGTCGCATGACGGAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACTCTCTGGACATTGTTATCATAGGTGAGAGTGTCCGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634384 145 + 60714840 CCAAGGTCAACTTCTCCATCGGTCCCATGATGCCTACCCTTGCAGGGACCTACAGATGCTACGGTTCTCTTTCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCATGATGACAGGTGAGAGTGTCCAGAC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55639597 145 + 59248254 CCAAGGCCAACATCTCCATGGGTCCCATGACGCCTGCCCTTGCAGGGACCTACCAATGCTATGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGTCCCCAGTGACCCCCTGGACATTGTGATCACAGGTGAGAGTGTCCAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47727284 136 + 51301725 CCAAGGCCAACATCTCCACAAGTCCCATGACGCCTGCCCTGGCAGGGACCTACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGC---------TCCCCTGGGCATTGTGATCACAGGTGAGAGTGTCCGGac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405915 145 + 50890351 CCAAGGCCAACATCTCCACAGGTCCCATGACGCCTGCCCTTGCAGTGACCTACCAATGCTATGGTTCTTTTACTCACTCCCCATATGAATGGTCAGCCCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTTCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771588 145 + 49145316 TCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGAC i calJac3.chr22 I 53 I 627 e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=272017.000000 s hg38.chr19_GL949748v2_alt 757614 219 + 1064304 ATTATTCTCATTGTCACTGGGACACAGAGTGAATGATCCACGACTTGGAGG-CCCAGGTGGTTATAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTAATTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGACAGAAAGAG s panTro4.chr19 59739094 219 + 63644993 ATTCTTCTCATTGTCATTGGGACACGGAGTGAATGATCCACGACTTGGAGG-CCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTAGGGAGAGAGACTAACTTGGTGAGGTCTGTACAAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGACAGAAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634529 219 + 60714840 ATTCTTCTTATTGTCATTGGGATGCAGAGTGAATGATCCAGAACTTGGAGG-CCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGGGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGATAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGAGAGCTAGAAAAGACACAAGGAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55639742 220 + 59248254 ATTCTTCTCATTGTCACTGGGACACAGAGTGAATGATCCAGGACTTGGAAGCCCCAGGTTGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCACACAGGGAGGTAGAAAAGAGAGAAAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47727420 220 + 51301725 attcttctcattgtcacTGGGACACAGAGTGAATGATCCAGGACTTGGAAGCCCCGGGTGGTCATGAGGAATATGAGTGTGGGATTCTTATGGAGAGAGACTCACTTGGTGAGGTCTGTAccaacagagacagagaaacaggagacacaagcacagaccaggtgtcataacagaggacagacacaggGGCCACACAAGGagttagaaaagagagaaagag i papAnu2.chr19 C 0 I 325 s chlSab2.chr6 47406060 220 + 50890351 ATTCTTCTCATTGTCACTGGGACACAGAGTGAATGATCCAGGACTTGGAAGCCCCAGGTGGTCATCAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCACACAGGGAATTAGAAAAGAGAGAAAGAA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 627 + 49145316 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=538851.000000 s hg38.chr19_GL949748v2_alt 757833 460 + 1064304 TTAAAGGAGAC------ACAGACAGACATGTGCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACTTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGGCCTGAGTTGGGCCCTGTGGCCTCAGGCCTTCTGGCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCGTCCCAGGATATCATGGCCCCAGAACATCAACCCCTGTATACTGTGTGAACTTGCGGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAA s panTro4.chr19 59739313 460 + 63644993 TTAAAGGAGAC------ACAGACAGACATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGTCTTGTGGCACCTACAGATGCTGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCGTCGCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGCAGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACTGAGAGGCACAGAGAGAAATCAAGAACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGACTGAGAGACTCACTGACACATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634748 462 + 60714840 TTAAAGGAGACA----GATAGACAGACATGTCCCAGAGAGAGGTGACCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGATTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCAAGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCACACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55639962 467 + 59248254 GTAAAGGAGACACTCAGACAGACAGACATGTCCCAGAGAGAGGTGCCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAGCTTCATCTCTGTGTTACCTCCACAGAGTGATCTCTACCAGGAGAACCCAAGAGCACGCTTATTTCTCACCTTAGTTGGGCCCTGGGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTGATTCTGACACCTCTGCCTCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCCCAGAACACCAACCCCTGTGTGCTGTGTGTACTTGGGGTCTCCAGACTGGATTCTGAGGCTCATATTCCAAACAACCACACATATGATAGGATTCCTGACAGACACAGAGAGAAATCAGGGACATTAAAAAGCAAAGGCATAAACACACAGAGAATGAGCCAGAGGAAGGAGACTGACAAGCTCACAGCCACATAA i macFas5.chr19 C 0 I 509 s papAnu2.chr19 47727965 465 + 51301725 gtaaaggagacactcagacagacagacatgtcccagagagagGTGCCCTTCCATGCTGACTTTGTTCAGAGACCTGGCACAGGTAAGAAGCTTCATCTCTGTGTTACCTCCACAAAGTGATCTCTACCAGGAGAACCCAAGAACACCTTTATTTCTCACCTTAGTTGGGCCCTGTGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTCATTCTGACACCTCTGTCTCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCCCAGAACAACAACCCCTGTGTGC--TGTGTACTTGGGGTCTCCAGACTGGATTCTGAGGCTCATATTCCAAACAACCGCACATATGATAGGATTActgacagacacagagagaaatcagggacattaaaaagcaaaggcataaacacacacaaaatgagcCAGAGGAAGGAGAGTGGCAAGCTCACAGCCACATAA i papAnu2.chr19 I 325 C 0 s chlSab2.chr6 47406280 461 + 50890351 GTAAAGGAGACACT----CAGACAGACATGTCCCAGACAGAGGTGCCCTTCTGTGCTGACTTTGTTCAGAGACCTGGCACAAGTAAGAAGCTTCATCTCTGTGTTACCTCCACAAAGTGATCTCTACCAGGAGAACCCAAGGACACCCTTATTTCTCACCTTAGCTGGGCTCTGGGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTCATTCTGACACCTCTGCCTCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCCCAGAACAACAACCCCTGTGTGC--TGTGTACTTGGGGTCTCCAGACTGAATTCTGAGGCTCATATTCCAAACAACCGCACATATTATAGGATTACCGACAGACACAGAGAGAAATCAGGGACATTAAAAAGCAAAGGCATAAACACACACAGAATGAGCCAGAGGAAGGAAAGTGGCAAGCTCACAGCCACATAA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 627 + 49145316 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=17452.000000 s hg38.chr19_GL949748v2_alt 758293 16 + 1064304 AGAGGGAGAAAAGAGG s panTro4.chr19 59739773 16 + 63644993 AGAGACAGAAAAGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635210 16 + 60714840 AGAGAGAGAAAAGAGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55640938 16 + 59248254 aGAGAGAGAAAAGAGG i macFas5.chr19 I 509 C 0 s papAnu2.chr19 47728430 16 + 51301725 AGACAGAGAAacgagg i papAnu2.chr19 C 0 I 872 s chlSab2.chr6 47406741 16 + 50890351 AGACAGAGAAAtgagg i chlSab2.chr6 C 0 I 45446 e calJac3.chr22 45771733 627 + 49145316 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=277428.000000 s hg38.chr19_GL949748v2_alt 758309 448 + 1064304 GCAGAGAAGTGGAGAGAACAATGGAAGGGAACAGAGAAAAGcactaaaattagagtcctgagggagaggcacaaggacatagaaagatggagatgt-ggggatgaattgcagagattccaaagagaactagagagaccgagaggcagagcaagac------------------agatgatagatgga----tagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgatcgattcattcattgattaatcgatgatacatagagatgat---gaagatga-------------agatagatagataatacatagagatagagaggcagaca---a--agagaaatcatagagag-agagagatgatacatagatatagataatagatgatttttg----gatagacaatt----gatagataaatagat-tat-------atatagatatagatgacaggtagagaatttgtagataggcac s panTro4.chr19 59739789 450 + 63644993 GCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGcactaaaattagagtcctgagggagaggcacaaggacatagaaagatggagatgt-ggggatgaattgcagagattccaaagagaactagagagaccgagaggcagagcaagac------------------agatgacagatgga----tagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgattgattgattcatcgattaatagatgatacatagagatgat---gaagatga-------------agatagatagataatacatagagatagagaggcagaca---aagagagaaatcatagagag-agagagatgatacatagatatagataatagatgattgatg----gatagacaatt----gatagataaatagat-gat-------atatagatatagatgacaggtagagaatttGtagataggcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635226 454 + 60714840 GCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCACGAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGT-GGGGATGAATTGCAGAGATTCcaaagagaactagaaagaccgagaggcagagcaagac------------------agatgatagatgga----tagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagaagatgattgattgattcattgattaatagatgatacatagagatgat---gatgatga-------------agatagatagataatacatagagatagagaggcagaca---aagagagaaatcatagagag-agagagatgatacatagatatagataatagatgattgatggctagatagacaatt----ggtagataaatagat-gat-------atatagatatagatgacaggtagagaatttgtagataggcac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55640954 470 + 59248254 GCAGAGAAGTGGAGAGAATGATGGAAGGAAGCTGAGAAAAGCCCTAAAATCAGAGTCCTGAGGGAGAGGCACAAGGAGAGAGAAAGATGGAGATGTGGGGGATGAATTGCAGATATTTCAAAGACAACGAGACAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagacagagagatg-cagatgga----------tagatagatgataaataggtagatgatagataatagataggttatagatacatacatgatgactgattg------------gtagatgatacatagagatgataatgatgatgataaatagacaaagagatagatacatgatacatagagatagagaggcagacatgtaacagaa-------atagag-agagagaggatacatagatatagataatagctgattgatggatacatagatagtt----aattgatagagagat-gat-------acatatatatagatgatagatagataaataatttgtagatac i macFas5.chr19 C 0 I 43 s chlSab2.chr6 47452203 450 + 50890351 GCAGAGGAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATCAGAACCCTGAGGGAGGGGCACAAAGACAGAGATAGATAAAGATGT-GGGGATGGATTGCAGAGATTCCAAATAGAACTAGAAAAACTGAGAGGCAGAGAAAGACAAGGAAatggagagagacatatgatagatgaatggatagatgtagatagatgataaataggtaggtgatagataatggatgggttatagatacata----------------------------------------------------gatgatgattgatagatatatagatacgtagatgatacatagagacagagaggcagaca---gatagag-------agggaacagacagatgatacacagatatagataatagatagatggtggatagatagagagacagaaaattgatacagagatagatacatgcaacatagataCAGATTACagatagataattgatagattgatag i chlSab2.chr6 I 45446 T 44875 e calJac3.chr22 45771733 627 + 49145316 I e papAnu2.chr19 47728446 872 + 51301725 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=157224.000000 s hg38.chr19_GL949748v2_alt 758757 242 + 1064304 cagatagataaatagatatatcg-------------------atagataatagatagaaatatgcagaaagttatgaacaggacacaaagtgagaaactcagaatttaaaaaa-agtaacatcaagtcaactagtccaaggagAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACA----TATCTagaggtgagaaagtgaggtcagagacctagagagacagagaaggtggaaagaggaaatagacataaagagagatggt s panTro4.chr19 59740239 242 + 63644993 ctaatggataaatagatatatca-------------------atagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTTAAAAAA-AGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACA----TATCTAGAGGTgagaaagtgaggttagagacctagagagacagagaaggtggaaggaggaaatagacataaagagagatggg i panTro4.chr19 C 0 T 46369 s ponAbe2.chr19 56635680 238 + 60714840 cgaatagataaatagatagatcg-------------------atagagaatagatagaaatatgcag-aagttatg-acaggacac-aagtgag-aactcagaatttaaaaag----tacattaagtc-accaacccaaggagggtcagagagaataaaacaATCCAAAAAGGGAAAACATATCTATCTAGAGTTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTAGAAGGAGGAAGTAGACATGAAGAGAGATGGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55641467 258 + 59248254 tagatagatagatagatagatagacagatagataacggatacatagata----atagaAATATGCAGAAAATTTTGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGGGTCAGAGAGAATAAAATGGTACAAAGAAAAAAAACA----TAGCTAGGGATGGGGAAGTGAGGTCAGAGACCTAGGGACATGGAGAAGGTGGAAGGAGGAAATAGACATGAagggagacgga i macFas5.chr19 I 43 C 0 s chlSab2.chr6 47407778 239 + 50890351 cagatagatagatagatagatag-------------------atagata----atagaAATATCCAGAAAATTTTGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAAAGGAAGATTAAGTCAACCAATCTAAGGAGGGTCAGAGAGAATAAAATGGTACAAAGAAAAAAAACA----TAGCTAGGGATGGGGAAGTGAGGTCAGAGACCTAGAGACACGGAGAAAGTGGAAGGAGGAAATAAACATTAAGGGAGATGGG i chlSab2.chr6 T 44875 C 0 e calJac3.chr22 45771733 627 + 49145316 I e papAnu2.chr19 47728446 872 + 51301725 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=8146.000000 s hg38.chr19_GL949748v2_alt 758999 19 + 1064304 gtggagggtgagacagaga s panTro4.chr19 59694112 19 + 63644993 GTGGAGGGTGAGAGAGAGA i panTro4.chr19 T 46369 C 0 s ponAbe2.chr19 56635918 13 + 60714840 GTGGAGGGT------GAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55641725 19 + 59248254 gtgaagggtgagagacaga i macFas5.chr19 C 0 I 61 s chlSab2.chr6 47408017 17 + 50890351 GTGAAGGGTGAGAGATA-- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 627 + 49145316 I e papAnu2.chr19 47728446 872 + 51301725 I e rheMac3.chrUn_JH290802 40821 26771 + 40826 T a score=101631.000000 s hg38.chr19_GL949748v2_alt 759018 85 + 1064304 gagagagCATTAGGCCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGTGGGAGGGGAGTTGTGACAAGGAAGAACCTCCCTGAGG s panTro4.chr19 59694131 85 + 63644993 GAGAGAGCATTAGGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635931 83 + 60714840 GAGAGAGCATTAGGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGT--GAAGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14050 87 + 40826 aagagagCATTAGGTCACTAGAGCAGGTGCAGGGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i rheMac3.chrUn_JH290802 T 26771 C 0 s macFas5.chr19 55641805 87 + 59248254 aagagagCATTAGGTCACTAGAGCAGGTGCAGGGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i macFas5.chr19 I 61 C 0 s chlSab2.chr6 47408034 85 + 50890351 GAGAGAGTACTAGGTCA-TAGAGCAGGGG-AGTGAGCTCTCAGCTCAGGTGTGAGGGGAACTGTGACAAGGAAGAACCTCCCTGAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771733 627 + 49145316 I e papAnu2.chr19 47728446 872 + 51301725 I a score=461876.000000 s hg38.chr19_GL949748v2_alt 759103 325 + 1064304 AAACTGCCTCTTCTCCTTCCAGGTCTATGTGGGAAACCTTCTCTCTCAGCCCAGCCGCGCCCCATGGTTAAGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATCTACCATCTATCAAGGGAGGGGGAGGCTCATGAACTTAGGTTCCCTGCAGTGCCCAAGGTCAATGGAACCTTCCAGGCCAACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCTTAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAA s panTro4.chr19 59694216 325 + 63644993 AAACTGCCTCTTCTCCTTCCAGGTCTATTTGGGAAACCTTCGCTCTCAGCCCAGCCGGGCCCCACGGTTCGCGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCAGGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGAGGGTCCATGAACCTAGGCTCCCTGCAGTGCCCAGCATCAATGGAACATTCCAGGCTGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACACATGCTTTGGCTCTTTCCATGACTCACCCTATGAGTGGTCAGACCCGAGTCACCCACTGCTTGTTTCTGTCACAGGTGAGGAAA i panTro4.chr19 C 0 I 46369 s ponAbe2.chr19 56636014 325 + 60714840 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCAGGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATTTATCCAGGGAGCAGGGGAGCCGTGAATGTAGGCTCCCTGCAGTGTCCAAGGTCAATGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14137 325 + 40826 AAACTGCCTCTTCTCCTTACGGGTCTATACAGGAAATGTTCTCTCTCAGCCCAGCCGGGCCCCACTGTTCATGCAGAAGAGAACATGACCTGATCCTGCAGCTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGCAGTGCCGAGGGTCCATGGAACATTCCAGGCCGACTTCCCTCTGGGGCCTGCCA------CCCACGGAGGGACGTTCAGATGCTTTGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAA i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55641892 325 + 59248254 AAACTGCCTCTTCTCCTTCCGGGTCTATACAGGAAATGTTCTCTCTCAGCCCAGCCGGGCCCCACTGTTCATGCAGAAGAGAACATGACCTGATCCTGCAGCTCCCGGAGCTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGCAGTGCCGAGGGTCCATGGAACATTCCAGGCCGACTTCCCTCTGGAGCCTGCCA------CCCACGGAGGGACGTTCAGATGCTTTGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47408119 325 + 50890351 AAACTGTCTCTTCTCCTTCCAGGTCTATACAGGAAACCTTCTCTCTCAGTCCAGCCGGGCCCCACTGTTCACGCAGGAGAGAACTTGACCTTGTCCTGCAGCTCCCAGAGCTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGCAGTGCCGAGGGTCCATGGAACATTCCAGACCGACTTCCCTCTGGGGCCTGCCA------TCCACGGAGGGACGTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCTGAGTGACCCACTGCCCATTTCTGTCACAAGTGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 331 + 49145316 AATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAGC i calJac3.chr22 I 627 C 0 e papAnu2.chr19 47728446 872 + 51301725 I a score=4200.000000 s hg38.chr19_GL949748v2_alt 759428 2 + 1064304 CC s panTro4.chr19 59740910 2 + 63644993 CC i panTro4.chr19 I 46369 C 0 s ponAbe2.chr19 56636339 2 + 60714840 CC i ponAbe2.chr19 C 0 I 16574 s rheMac3.chrUn_JH290802 14462 2 + 40826 CC i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55642217 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47408444 2 + 50890351 CC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772691 2 + 49145316 CC i calJac3.chr22 C 0 C 0 e papAnu2.chr19 47728446 872 + 51301725 I a score=1911.000000 s hg38.chr19_GL949748v2_alt 759430 1 + 1064304 A s panTro4.chr19 59740912 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652915 1 + 60714840 A i ponAbe2.chr19 I 16574 C 0 s rheMac3.chrUn_JH290802 14464 1 + 40826 A i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55642219 1 + 59248254 A i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47408446 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772693 1 + 49145316 A i calJac3.chr22 C 0 T 3495 e papAnu2.chr19 47728446 872 + 51301725 I a score=263601.000000 s hg38.chr19_GL949748v2_alt 759431 223 + 1064304 GTCTGTTCCCCAAATAGTGGGACTCAGATGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGGGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGgacagaagagacacaaagcaaacatacagaaagaggcatagacagacagacagagcgaggcagacagaTCACATTAGGGTTTGGGGTGGTAACTGCAACCCTACCTGA---AGCTTGCAGATAG s panTro4.chr19 59740913 223 + 63644993 GTCTGTTCCCCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGAGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGGATAGAAGagacataaagcaaacatacagaaagaggcatagacagacagacagagcgaggcagacagaTCACATTAGGGTTTGGGGTGGTAACTGCAACCCTACCTGA---AGCTTGCAGATAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652916 223 + 60714840 ATCTGTTCCCCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGGGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGGATAGAAGagacataaagcaaacatacagaaagagatatagacagacagacagagcgaggcagacagaTCACATCAGGATTTGGGGTGGTAACCGCAACCCTACCTGA---AGCTTGCAGATAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14465 212 + 40826 ATCTCTTCCCCAAATAGTGGGACTCAGACAGACGACAATGGCCACATTCAGGGTGACCTCAGA---------TGGCCATGGTGGTGCCAGCCAGAGATACTGgacagaaaagacacagagcaaacatacagaaagag--atagacagacagacagagcaaggcagacagaTCACATCAGGATTTGGGGCGGTAACTGCAACCCTACATGA---AGCTTGCAGATAG i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55642220 212 + 59248254 ATCTCTTCCCCAAATAGTGGGACTCAGACAGACGACAATGGCCACATTCAGGGGAACCTCAGA---------TGGCCATGGTGGTGCcagccagagatactggacagaaaagacacagagcaaacatacagaaagag--atagacagacagacagagcaaggcagacagaTCACATCAGGATTTGGGGCGGTAACTGCAACCCTACATGA---AGCTTGCAGATAG i macFas5.chr19 C 0 M 210 s chlSab2.chr6 47408447 211 + 50890351 ATCTCTTCCCCAAACAGTGGGACTCAGACGGACGACAATGGCCACATTCAGGGGAGCCTCAGA---------TGGCCATGGGGGTGTcagccagagatactggatagaaaagacacagagcaaacatacagaaag------agacagacagacagagcgaggcagacagaTCACATCAGGACTTGGGGTGGTAACTGCAACCCTACATGAATCAGCTTGCAGACAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e papAnu2.chr19 47728446 872 + 51301725 I a score=283802.000000 s hg38.chr19_GL949748v2_alt 759654 336 + 1064304 AGCACAGGCCACATAAACCACTTCCCAGTCTTTGTACAGAAGCCCACCTGGGACACATGTAAACAGCATCAATGCTGACTCAGGAGCATGAAAGGCCGGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCGCCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAAGAGTGATTTCCACATGGGGGGCACAGATGCAACCATCGTTGGGGGAGCCCCAATGTCTCTTGATGGGAGGCATTTTCCACCCTAGATGTTTTTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCTG s panTro4.chr19 59741136 336 + 63644993 AGCGCAGGCCACATAAACCACTTCCCAGTCTTTGTACAGAAGCCCACCTGGGACACATGTAAACAGCATCAATGCTGACTCAGGAGCATGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGAATTGGCCGCCCACCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAAGAGTGATTTCCACATGGGGGGCACAGATGCAACCATCGTTGGGGGAGCCCCAATGTCTCTTGATGGGAGGCATTTTCCACCCTGGACATCTCTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56653139 336 + 60714840 AGCACAGGCCACATAAACCACTTCCCAGTCTTCGTACAGAGGCCCACCTGGGATGCATCTAAACAGCATCAGTGCTGACTCAGGAGCATGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCACCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAACAGTGATTTCCACGTGGGGGGCACAGATGCGACCATCGTTAGGGGAGCCCCAATGTCTCTTGATGGGATGCATTTTCCACCCTGGATGTCTCTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCCG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14677 335 + 40826 AGCACAGGCCACAAAAAACACTTCCCGGTCTTTGTACAGAGGCCTACATGGGACACATCTAAGCAGCATCAGTGCTGACTCGGCAGCGTGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCACCATTCCCCATTTCCAGAAGCCCCCACATCTCACCAAAGAGTGATTTCCACGTGGGAGGCACAGATGCAACCATTGTTGGGGGAGCCTCCATGTCTCTTGATGGGAGGCATTTTCCACCCTGGATGTCTCCTGCTCCCTCCACACCTTGGAGCCTCAGTGGGGGAGCCTTCTCTGAGGACTCGGGGAGGGCCTCCTG- i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47408658 335 + 50890351 AGCACAGGCCACAAAAAACACTTCCCAGTCTTTGTACAGAGGCCTACATGGGACACATCTAAGCAGCATCAGTGCTGACTCAGCAGCATGAAAGGCCAGGCTCAGATTGGAAAGACAAGAGGTGGCATTGGCCGCCCACCATTCCCCATTTCCAGAAGCCCCCACATCTCACCAAAGAGTGATTTCCACGTGGGGGGCACAGATGTGACCATCGTTGGGGGAACCTCCATGTCTCTTGATGGGAGGCATTTTCCACCCTGGATGTCTCCTGCTCCCTCCACACCTTGGAGCCTCAGTGGGGGAGTCTTCTCTGAGGACTCGGGGAGGGCCTCCTG- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e papAnu2.chr19 47728446 872 + 51301725 I e macFas5.chr19 55642432 210 + 59248254 M a score=666974.000000 s hg38.chr19_GL949748v2_alt 759990 514 + 1064304 GGACTCGCAGGATTTCCAAGCTAGATGACAACATGACAGGTGGAAACAGGCCCATTCCTTCGCCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATCTGCCACTT---CGCTCAGTGGCCTCAAGCCAGACATCTTCCCTACAGACTTGCAGTGATTCTCCATCAGCATTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATGTTACTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGAGACCACCTAGGTGCTACTGGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA s panTro4.chr19 59741472 517 + 63644993 GGACTCGCAGGATTTCCAAGCTAGATGATAACATGACAGGTGGAAACAGGCCCATTCCTTCACCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCGGCACTGAAGGCTGAGAAGGATCTGCCACTTCTCCGCTCAGTGGCCTCAAGCCAGACATCTTCCCTACAGACTTGCAGTGATTCTCCATCAGCATTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTCCTCCATGTTACTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGGGACCACCTAGGTGCTACTGGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56653475 517 + 60714840 GGATTTGCAGGATTTCCAAGCTAGATGACAACGTGACAGGTGGAAACAGGCCCATTCCTTCACCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGATCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATCTGCCACTTCTCCGCTCAGTGGCCTCAAGCCAGACATCTTCCCTAAAGATTTCTGGTGATTCTCCATCAGCATTTAGAGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACCTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTTCATGTTATTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGAGACCACCTAAGTGCTACTAGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 15012 517 + 40826 GGATTCCCAGGATTTCCAAGCTAGATGACAACATGGCAGGTGGAAAGAGGCCCATTCCTCCATCCAGGGAGCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCTTTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATGTGCCACTTCTCCACTCAGTGGCCTCAAGCCAGACATCTTCCCTGCAGACTTCCAGTGATTCTCCATCAGCATTGAGGGCTGTGGCCACCAACCTGGGTGTTAGTCTATAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATATTACTCTCTCCCCAGAACGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATCATCTTTAGGGAGCAAGAGGAGAAGGAAAGAACAAAGTATGGAACCATCTAGGTGCTGCTGGCTGAGGTTCCATTTGCCAGTGAAGGGACTGCACTCAGCCGAGGCGGCA i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55642642 517 + 59248254 GGATTCCCAGGATTTCCAAGCTAGATGACAACATGGCAGGTGGAAAGAGGCCCATTCCTCCATCCAGGGAGCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCTTTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATGTGCCACTTCTCCACTCAGTGGCCTCAAGCCAGACATCTTCCCTGCAGACTTCCAGTGATTCTCCATCAGCATTGAGGGCTGTGGCCACCAACCTGGGTGTTAGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATATTACTCTCTCCCCAGAACGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATCATCTTTAGGGAGCAAGAGGAGAAGGAAAGAACAAAGTATGGAACCATCTAGGTGCTGCTGGCTGAGGTTCCATTTGCCAGTGAAGGGACTGCACTCAGCCGAGGCGGCA i macFas5.chr19 M 210 C 0 s chlSab2.chr6 47408993 504 + 50890351 GGACTCCCAGGATTTCCAAGCTAGATGACAACATGGCAGGTGGAAAGAGGTCCATTCCTCCATCCGGGGAGCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCTTTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGACTGAGAAAGATGTGTCACTTCTCCACTCAGTGGCCTCAAGCCAGACATCTTCCCTGCAGACTTCCAGTGATTCTCCATCAGCTTTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACC-------------TTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATATTATTCTCTCCCCAGAACGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCTTTAGGGAGCAAGAGGAGAAGGAAAGAACAAAGTATGGAACGATCTAGGTGCTGCTGGCTGAGGTTCCATTTGCCAGTGAAGGGACTGCACTCAGCCAAGGCGGCA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e papAnu2.chr19 47728446 872 + 51301725 I a score=467397.000000 s hg38.chr19_GL949748v2_alt 760504 263 + 1064304 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGAGTAGAGAGAACTGAGCTCACCCAGTAAATGACCCCTTCACTAactcattcatctaatatttatttcacacctaccatcagttctctctgtttcacggccaggagtagacagcacggccaagctcctgggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagagaatgaatgaatgagtgaatgatggaatgagtgaatga s panTro4.chr19 59741989 263 + 63644993 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGAATAGAGAGAACTGAGCTCACCCAGTAAATGACTCCTTCACTAactcattcatctaatatttatttcacacctaccatcagttctctctgtttcatggccaggagtaaacagcacggccaagctccttggttcatgatgctcacattgctgtggggtgggagagagaggcagaacatgaatgaatgaatgaatgagagaatgaatgaatgagtgaatgatggaatgag----tga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56653992 263 + 60714840 ACTCAGGGAAGTCAGCCGAGGGAGGGAATTAGAGTAGAGACAACTGAGCTCACCCAGTAAATGACCCCTTCACTACCtcattcatctaatatttacttcacacctaccatcaattctctctgtttcatggccaggagtaaacagcacagccgagctccttggttcatgatgctcacattgctgtggggtgggagagagaGGCAGAAC----atgaatgaatgaatgagagaatggatgaatgagtgaatggatgaatgagtgaatga i ponAbe2.chr19 C 0 I 318 s rheMac3.chrUn_JH290802 15529 263 + 40826 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGATTAGAGAGAACTGAGCTCACCCAGTAAATGACCTCTTCattaactcattcatctaatatttatttcacagctaccatcagttatctctgttgcatggccaggagtaaacagtgtggccaagttccttggttcatgatgctcacattgctgtggggtgggaaagaGAGGCAGAAC----atgaatgaatgaatgagtgaatgaatgaatgagtgaatggatgaatgagtaaatga i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55643159 263 + 59248254 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGATTAGAGAGAACTGAGCTCACCCAGTAAATGACCTCTTCattaactcattcatctaatatttatttcacagctaccatcagttatctctgttgcatggccaggagtaaacagtgtggccaagttccttggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagcgaatgaatgaatgagtgaatggatgaatgagtaaatga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47729318 263 + 51301725 aCTCAGGGAAGTCAGCCGAAGGAGGGCATTAGATTAGAGAGAACTGAGCTCACCCAGTAAATGACCTCTTCATTAACTCATTCATCTAATATTTATTTCACACCTACCATCAGTTATCTCTGTTGCATGGCCAGGAGTAAACAGTATGGCCAAGCTTCTTGGTTCATGATGCTCACATCGCTGTGGGGTGGGAGAAAGAGGCagaac----atgaatgaatgaatgagcaaatgaatgaatgagtgaatggaggaatgagtaaatga i papAnu2.chr19 I 872 C 0 s chlSab2.chr6 47409497 263 + 50890351 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGATTAGACAGAACTGAGCTCACCCAGTAAATGACCTCTTCattaactcattcatctaatatttatttcacacctaccatcagttatctctgttgcatggccaggagtaaacagtgtggccaagttgcttggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagcaaatgaatgaatgagtgaatggatgaatgagtaaataa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T a score=11190.000000 s hg38.chr19_GL949748v2_alt 760767 8 + 1064304 atgaatga s panTro4.chr19 59742252 8 + 63644993 atgaatga i panTro4.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 15792 8 + 40826 atgaatga i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55643422 8 + 59248254 atgaatga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47729581 8 + 51301725 atgaatga i papAnu2.chr19 C 0 I 121 s chlSab2.chr6 47409760 8 + 50890351 atgaatga i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 3495 + 49145316 T a score=3869.000000 s hg38.chr19_GL949748v2_alt 760775 4 + 1064304 atga s panTro4.chr19 59742260 4 + 63644993 atga i panTro4.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 15800 4 + 40826 gtga i rheMac3.chrUn_JH290802 C 0 I 165 s macFas5.chr19 55643430 4 + 59248254 gtga i macFas5.chr19 C 0 I 152 s papAnu2.chr19 47729710 4 + 51301725 ataa i papAnu2.chr19 I 121 C 0 s chlSab2.chr6 47409768 4 + 50890351 gtga i chlSab2.chr6 C 0 I 165 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 3495 + 49145316 T a score=4581.000000 s hg38.chr19_GL949748v2_alt 760779 13 + 1064304 atgtatgaattag s panTro4.chr19 59742264 13 + 63644993 atgtatgaattag i panTro4.chr19 C 0 C 0 s macFas5.chr19 55643586 13 + 59248254 atgagtgaatgaa i macFas5.chr19 I 152 C 0 s papAnu2.chr19 47729714 13 + 51301725 atgagtgaatgaa i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 3495 + 49145316 T e chlSab2.chr6 47409772 165 + 50890351 I e rheMac3.chrUn_JH290802 15804 165 + 40826 I a score=175075.000000 s hg38.chr19_GL949748v2_alt 760792 132 + 1064304 tgagtgaatccttagcacttggtgaaagtgccatgcacagaatgaaatgaatgaacgtggaacgttgtcatttggagtgtacaggagggaacgtctcactgagacctcatcagagagatcacatttaaactc s panTro4.chr19 59742277 132 + 63644993 tgagtgaatccttagcacttggtgaaagtgccgtgcacagaatgaaatgaatgaacgtggaacgttgtcatttggagtgtacaggagggaacgtctcactgagacctcatcagagagatcacatttaaactc i panTro4.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 15969 132 + 40826 tgagtgaatCCTCAGCACCTGGTGAAAGTGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTTGTCATTTGGAGTGTACAGGAGGGAACATCTCACTGagaactcaccaaggagatcacatttaaactc i rheMac3.chrUn_JH290802 I 165 C 0 s macFas5.chr19 55643599 132 + 59248254 tgagtgaatCCTCAGCACCTGGTGAAAGTGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTTGTCATTTGGAGTGTACAGGAGGGAACATCTCACTGagaactcaccaaggagatcacatttaaactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47729727 132 + 51301725 tgagtgaatcctCAGCACTTGGTGAAAGTGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTTGTCATTTGGAGTGTACAGGAGGGAACATCTCACTGAGAACTCACCAAGGAGATCACATTTAAACTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47409937 132 + 50890351 tgagtgaatCCTCAGCACTTGGTGAAAATGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTCATCATTTGGAGTGTACAGGAGGGAACATCtcactgagaactcaccagggagatcacatttaaactc i chlSab2.chr6 I 165 C 0 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 3495 + 49145316 T a score=942893.000000 s hg38.chr19_GL949748v2_alt 760924 535 + 1064304 cgatcttagagacaagagggagtgagccctggggagtgtgttgaaaggaactttcatggacttaggacattggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCATATGGTGAGGGCTGGTCAGAATCCAGAGAGATTTCtaaatgcccttgtgcttgtaaggaaagtgagtcctgtggttgggagtggacttataccttgggtcaggtccagcaattatctttctaaatcctctctaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggccgtggatttgcctacctgtccatttatttccgcgactcttcctccatgtatatttgcaggaatattactgggagtggttaagtgtaaactgattatatattcctggtaaatttaaaatgctataaatttacctgcttttttcctacattttatgcttaatgttttccgctgatttttcccaaagactaattttgtctaattttaatata s panTro4.chr19 59742409 535 + 63644993 tgatcttagagacaagagggagtgagccctggggagtgtgttgaaaggaactttcatggacttaggacattggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCATATGGTGAGGGCTGGTCAGAATCCAGACAGATTTCtaaatgcccttgtgcttgtaaggaaagtgagtcctgtggttgggagtggacttataccttgggtcaggtccagcaattatctttctaaatcctctctaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggccgtggatttgcctacctgtccatttatttccgtgactcttcctccatgtatatttgcaggaatgttactgggagtggttaagtgtaaactgattatatattcctggtaaattaaaaatgctataaatttacctgcttttttcctacattttatgcttaatgttttccgctgatttttcccaaagactaattttgtctaattttaatata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56654573 535 + 60714840 CGATCTTAGAGACAAGAGGGAGTGAGCCCTGGGGAGTGTGTTGAAAGGAACTTTCACGGACTTAGGACATTGGGGATGACCCTAATGTGAGAATGAGCTTGGTGTGTTCCAAGAAGTCCATGgacctgctgtatggtgagggctggtcagaatccagtcagatttctaaatgtcttagtgcttataaggaatgtgagtcctgtggttgggagtggacttataccttgggtcaggtccaacaattatctttctaaatcctctccaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggctgtggatttgcctacctgtccgtttatttccgcgacccttcctctatgtatatttgcaggaatgttgctgggagtggttaagtgtaaactgattatatattcctggtaaatcaaaaatactataaatatacctccttttttcctacattttatgcttaatgttttccactgatttttcccaaagactaattttgtctaattttaatata i ponAbe2.chr19 I 318 C 0 s rheMac3.chrUn_JH290802 16101 532 + 40826 cgatcttagagacaagagggagtgagccctggggagcgtgttgaaaggaagtttcatgtacttaggacgctggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCGTATGGTGAGGGCTGCTCAGAATCCAGTGAGATTTCTAAGTGCCCTTGGGcttgtaaggagtgtgagtcctgtggttgcaagtgaacttgtaccttaggtcaagtccagcaattctcttcctaaatcctctctaactgcctgaaacacttctatcaacaactgag---agaagagtgttaaacaccccactgtggccgtggatgtgcctatctctccgtttacttcggcgacacttcctccatgtatatttgcaggaatattactgggagtgattaagtgtaaattgattatatattcctggtaaattaaaaatactataaatttacctgcttttttcctaaattttatgcttaatgttttccactgatttttccccaagacttattttgtctaattttattata i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55643731 532 + 59248254 cgatcttagagacaagagggagtgagccctggggagcgtgttgaaaggaagtttcatgtacttaggacgctggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCTGTATGGTGAGGGCTGCTCAGAATCCAGTGAGATTTCTAAGTGTCCTTGGGcttgtaaggagtgtgagtcctgtggttgcaagtgaacttgtaccttaggtcaagtccagcaattctctttctaaatcctctctaactgcctgaaacacttctatcaacaactgag---agaagagtgttaaacaccccactgtggccgtggatgtgcctatctctccatttacttcggcgacacttcctccatgtatatttgcaggaatattactgggagtgattaagtgtaaattgattatatattcctggtaaattaaAAATACTATAAATTTACCTGCTTTTTTCCTAAATTTTATGCTTAATGTTTTCCACTGATTTTTCCCAAAGACTTATTTTGTCTAATTTTATTATA i macFas5.chr19 C 0 I 5946 s papAnu2.chr19 47729859 532 + 51301725 TGATCTTAGAGACAAGAGGGAAGAAGCCCTGGGGAGTGTGTTGAAAGGAATTTTCATGTACTTAGGACGCTGGGGATGACCCTAATGTGAGAATGAGCTTGGTGTGTTCCAAGAAGTCCATGGACCTGCCGTATGGTGAGGGCTCCTCAGAATCCAGTGAGATTTCTAGATGTCCTTGTGCTTGTAAGGAGTGTGAGTCCTGTGGTTGCAAGTGGACTCGTACCTTAGGTCAAGTCCAGCAATTCTCTTTCTAAATCCTCTCTAACTGCCTGAACCACTTCTATCAACAACTGAG---AGAAGAGTGTTAAACACCCCACTGTGGCCGTGGATTTGCCTACCTCTCCATTTACTTCAGTGACACTTCCTCCATGTATATTTGCAGGAATATTACTAGGAGTGATTAAGTGTAAATTGATTATATATTCCTgctaaattaaaaatactataaatttaCCTGCTTTTTCCCTAAATTTTATGCTTAATGTTTTCCACTGATTTTTCCCAAAGACttattttgtctaattttattATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47410069 532 + 50890351 tgatcttagagacaagagggaataggccctggggagtgtgttgaaaggaagtttcatgtacttaggacactggggatgaccctaatgtgagaatgggcttggtgtgctccaagaaGTCCATGGACCTGCCGTATGGTAAGGGCTGCTCAGAATCCAGTGAGATTTCTAAGTGTCCTTGGGCTTGTAAGGAGTGTGAGTCCTGTGGTTGCAAGTGAACTTGTACCTGAAGTCAAGTCCAGCAATTCTCTTTCCAAATCCTCTCTAACTGCCTGAACCACttctatcaacaactgag---agaagagtgttaaacaccccactgtggccgtggatgtgcctacctctccatttacttcagcgacacttcctccatgtatatttgcaggaatattactgggagtgattaagtgtaaattgattatatattcctggtaaattaaaaatactataaatttacctgtttttttcctaaattttatgcttaatgttttccactgatttttcccaaaggcttattttgtctaattttattata i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T a score=179405.000000 s hg38.chr19_GL949748v2_alt 761459 153 + 1064304 gttataccacatttctaac----agtgattgcttggtatatttctacattgtttaatttcaaactccatgaattgttaacattgagatgtgtcctttgtaaaTTTCAAACAATTCGCCTTAGAAAGTAAGACTTTCTGACAATCTTTTGTTCATGTT s panTro4.chr19 59742944 157 + 63644993 gttatgccacatttctaacagttagtgattgcttggtatattcctacattgtttaatttcaaactctgtgaattgttaagattgagatgtgtcctttgtaaaTTTCAAAAAATTCGCCTTAGAAAGTAAGACTTTCTGACAATCTTTTGTTCATGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56655108 157 + 60714840 gttataccacatttctaacagttagtgattggttggtatatttccacattgtttaatttcaaactctgtgaattattaacattgagatatgtccttcataaaTTTCAAACAATTCGCCTTAGAAAATAAGACTTTCTGACAATCTTTGGTTTATGTT i ponAbe2.chr19 C 0 T 8755 s rheMac3.chrUn_JH290802 16633 155 + 40826 actacaccacatttccaacagttagtgattgcttggtatatttctacattgtttaatttcaaaccctgtgaattgttaacactgacatgtgtcctttgtaaaTTT--AACAACGCACCTTAGAAAACAAGATTTGCTGACAATCTTTTGTTCGTGTT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47730391 156 + 51301725 ACTACACCACATTTCCAACAGTTAGTGATTGCTTGGTATATTTCtacattgtttaatttcaaaCCCTGTGAATTGTTAACACTGACATGTGTCCTTTGTAAATTTC-AACAACGCACCTTAGAAAACAAGACTTGCTGACAATCTTTTGTTCATGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47410601 156 + 50890351 actacaccacatttccaacagttagtgattgcttggtatatttctacattgtttaatttcaaaccctgtgaattgttaacactgacttgtgtcctttgtaaaTTTC-AACAACACACCTTAGAAAACAAGATTTGCTGACAATCTTTTGTTCATGTT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I a score=1910.000000 s hg38.chr19_GL949748v2_alt 761612 2 + 1064304 TG s panTro4.chr19 59743101 2 + 63644993 TG i panTro4.chr19 C 0 T 41237 s rheMac3.chrUn_JH290802 16788 2 + 40826 TG i rheMac3.chrUn_JH290802 C 0 n 0 s papAnu2.chr19 47730547 2 + 51301725 TG i papAnu2.chr19 C 0 I 13623 s chlSab2.chr6 47410757 2 + 50890351 TG i chlSab2.chr6 C 0 I 36216 e ponAbe2.chr19 56655265 8755 + 60714840 T e calJac3.chr22 45772694 3495 + 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I a score=0.000000 s hg38.chr19_GL949748v2_alt 761614 50001 + 1064304 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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A e ponAbe2.chr19 56655265 8755 + 60714840 T e calJac3.chr22 45772694 3495 + 49145316 T e chlSab2.chr6 47410759 36216 + 50890351 I e papAnu2.chr19 47730549 13623 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chrUn_JH290802 16790 0 + 40826 n e panTro4.chr19 59743103 41237 + 63644993 T a score=846.000000 s hg38.chr19_GL949748v2_alt 811615 3 + 1064304 AAC s panTro4.chr19 59701866 3 + 63644993 aac i panTro4.chr19 T 41237 C 0 s ponAbe2.chr19 56646510 3 + 60714840 aac i ponAbe2.chr19 T 8755 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e chlSab2.chr6 47410759 36216 + 50890351 I e papAnu2.chr19 47730549 13623 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chrUn_JH290802 16790 0 + 40826 I a score=165060.000000 s hg38.chr19_GL949748v2_alt 811618 363 + 1064304 CCTTTAAATTTAGTAGCCAGAGCCCTCTAATTTGTTATTATAGGCTACTTGCTAt-------ttttttttcttgaggcggagtcttgctctgtcgcccaggcgggactgtagtggagcaatctcagctcactgcaacttccgcctcccaggttcaggcgattctcgtgcctcagtctcttgagtagctggcgtttcaggtgcctgccaccaggcatggctaatttttgaatttttagcagagacgcggtttcactgtgttggccaggctgctctcaatctcctcatctcagttgatccgcccacctcggcttcccgacctgctgggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGT s panTro4.chr19 59701869 370 + 63644993 cctttaaatttagtagccagagccctctaatttgttattATAGGCTATTTGCTATGtttttgttttttttctagaggcggagtcttgctctgtcacccaggctggactgcagtggtgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcgtgcctcagcctcttgggtagctggcgttacaggtgcctgacaccaggcacagctaatttttggatttttagcagagacacggtttcactctgttggccaggctgctctcaatctcctcatctcagttgatccgcacacctcggcttcccgacgtgctgggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646513 362 + 60714840 cctttaaatttagtagccagagccctctaatttgttattATAGGCTATTTGCTA--------ttttttttcttgaggtggagtcttgctctgtcgcccaggctggactgcactggcgcagtctcagctcactgcaacctccgccttccaggttcaggtgattctcgcgtctcagcctcttgagtagctgacattacaggtgtgtgccacgaggcatggctaatttttgagtttttagcagagacacggtttcactatgttggccaggctgctctcaaactcctcatctcagttgatccgcccacctcggcttcccaacgtgcggggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47446975 370 + 50890351 ccttaaaatttggtagctggagtcctttagtttCTTATTATAGGCTATTTGCTACGCtttttttatatttcttcaggcagagtctcgctctgttacccaggctggactgcagtggcacaatctcggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctcttgagtagctggcatgacaggtgcccactgccaggcatggctaatttttgtatgtttagcagagacatggtttctctaagttggccagggaggtctcgaactcccgacctccgttgatccacccacctcggcttcccaaagtgctgggGGACACTTGATTTCCTACAGTATTATGTTACTGGATATTTCCAC i chlSab2.chr6 I 36216 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e papAnu2.chr19 47730549 13623 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chrUn_JH290802 16790 0 + 40826 I a score=191909.000000 s hg38.chr19_GL949748v2_alt 811981 308 + 1064304 AAAATTT-AAAATgagggaggcagagagacagagagagagCAAACTCCAGAGTTGGGACTCTGGAATCTTGAGTCATGAGACAAATTATAGATAAAACTACAAAAATCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTGAACTGGTTCTGCTGTAATACTAGAAATACAAGCATGAACAATTCTAATG--GTTTATTAGTCACAATGACTCTGAAAACACTAATAATACCTATTAGATATTTTGCATATTA s panTro4.chr19 59702239 310 + 63644993 AAAATTT-AAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATG-TGTGGTTTTTGCTGATAACATACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGTTGTAATACTAGAAATACAAGCATGAACAATTCTAATGAGGTTTATTAGTCACAGTGACTCTGAAAACATTAATAATACCTATTAGATATTTTGCATATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646875 310 + 60714840 AAAATTTAAAAAGGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATGTTGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAACTTAAATCACTTTAACTGGTTCTGCTGTAATACTAGAAATACAAGCATGAAAAATTCTCATG--GTTTATTAGTCACAATTACTCTGAAAACCTTAATAATACCTATTAGATATTTTGCATATTA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47744172 296 + 51301725 aaagtgc-aaagccaaagag--agagagaaagagagacaggaaac-CGTGAG-------TTTAAAGTCTTGGGTCATAAGACAAACTCTAGATAAAATGAC-AAGATCCTCAGTCGACGTGTTGT-GTTTTTGCTAATGAGATGGAAATCTATGATGCTAAATAACTGCACAGTCTTTCTACTGAGATTTAAATCATTGTATCTGTTTCTGGTTTAATAGTAGAAATACCAGCATGGGAAATTATGATG--ATTTATTTAATACAATTGCTC-AATAATGATAGTAAGACCTATTAGGTATTTTGCATATTG i papAnu2.chr19 I 13623 C 0 s chlSab2.chr6 47447345 308 + 50890351 ACAATTT-AAAATgagggaggcagagagacagagagagagcgaAC-CATGTGCTGGGACTCTGGAATCTCAGGTCATGAGACAAATTGTAGATAAAATGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGACTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGTTCTGCTGTCATACTAGAAATACAAGCATGAAACATCCTAATG--GTTTATTCGTCACAATTGCTCTGACAACGTTCATAATACCTATTAGATATTTTGCATATTA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chrUn_JH290802 16790 0 + 40826 I a score=7255.000000 s hg38.chr19_GL949748v2_alt 812289 7 + 1064304 CACAGGA s panTro4.chr19 59702549 7 + 63644993 CACAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647185 7 + 60714840 CACAGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236124 7 - 106955855 cacatgA i nomLeu3.chr10 N 0 C 0 s papAnu2.chr19 47744468 7 + 51301725 CACATGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47447653 7 + 50890351 CACACGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chrUn_JH290802 16790 0 + 40826 I a score=451229.000000 s hg38.chr19_GL949748v2_alt 812296 342 + 1064304 AGAAGAGTTCGAATCTCAGATAAAAAC-----AATAAAAA-----TTCATGAAAAGTCTTTCATGTTAGCACAGATTTTAGGCATCTCATGTTTGGGAGGTTGGATCTAAGACATGTTTTGAGT-TGGTCATAGTGAAGGACGCGAGGTGTCAATTCTAGTGAGAGCAATTTCCAGGAAGCCATGTTCTGCTCTTGAGCGAGCACCCACT-GGGCCTCATGCAAGGTAGAAAAAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCA s panTro4.chr19 59702556 342 + 63644993 AGAAGACTTTGAATCTCAGATAAAAAC-----AATAAAAA-----TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGTCATCTCGTGTTCAGGAGGTTGGATCTGAGACGTGTTTTGAGT-TGGTCATAGTGAAGGATGCGAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGAGAGCACCCACT-GGGCCTCATGCAAGGTAGAAAGAGCCTGCATACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647192 342 + 60714840 AGAAGAGTTTGCATCTCAGATAAAAAC-----AATAAAAA-----TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCGGGAGGTTGGATCCGAGACGTGTTTTGAGA-TGGTCATAGTGAAGGACGCGAGGTGTGAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGTTCTTGAGCGAGCACCCACT-GGGCCTCATGCAAGGTAGAAAGAGCCTGCGTATGTCAGCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCACAGCCGCCTGTCTGCACAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236131 336 - 106955855 AGAGGAGTTTGAATCTCAGATAAAAAC-----AACAAAAA-----TACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGAGACTGGATCCGAGATGTGTTTTGAGT-TGGTCATAGTGAAGGATGCAAGGCGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGACCAAACAGCCACT-GGGCCTCATGCGAGGTAGAAATAG-CTGCATACGTCATCCTCCCATGATGTGGTCAGCAGGTAAAGTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACAGGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60521520 337 + 64156825 AGAAGAGTTTGAATCTCAGAAGAAAAC-----AACAAAAA-----TACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGT-TGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACT-GGGCCTCATGCAAGGCAAAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGA-----GCCCCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCA i rheMac3.chr19 T 4878 C 0 s papAnu2.chr19 47744475 352 + 51301725 AGGAGAGTTTCAATcgcagagaaaaacaaacaaacagaaaaagattaCAACGAAAGTCCTTCATGTGAGTGCACAGTTCAATCTTCCTGGGCTGGGGTAAGTGGGTCTGAGATGTGCTTTGAGTCTGGCCGTCATGCATGATGGGAAGTGACAAGTCTAGTCTG--CAGTTTTCAGAAAGCCACATTCCTCCCTTGACCGGACTCCCACTAGAACCTCATATGACGTACAAGAAGCCTACCTGTGTCCCCTTCACATGTTGTGGTCAATGTGTCAACTTCATGATCCAGGCTCCTCACCACATCCTCTGCACCGGTCAGTCGAGCAGAGTCACTGCGTCCTGGCAGCAGAAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47447660 342 + 50890351 AGAAGAGTTTGAAACACAGATAAAAAC-----AACAAAAA-----TACGTGAAAAGTCTTTCACGTCAGCACAGATTTTAGTCACCTCGTGTCCGGGAGGTTGGATTTGAGACGTGTTTTGAGC-TGGTCAGAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACCATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCT-GCGCCTCATGCAAGGTAGGAAGAGTCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 3495 + 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I a score=114983.000000 s hg38.chr19_GL949748v2_alt 812638 57 + 1064304 GCA------CCATGTCGCTCATGGTCATCATCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA s panTro4.chr19 59702898 57 + 63644993 GCA------CCATGTCGCTCATGGCCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647534 57 + 60714840 GCA------CCATGTCGCTCATGGTCGTCAGCATGGTGTGTGTTGGTGAGTCCTGGAAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236467 57 - 106955855 GCA------CCATGTTGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60521857 57 + 64156825 GCA------CCATGTCGCTCATGGTCATCAGCATGGCATGTGTTGGTGAGTCCCAGAAGGGAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47744827 63 + 51301725 GCACCAAGTCCATGTCGCTCACGGTCGTCATCCTGGCCTGTCTTGGTGAGTCCTGGAAGGGAA i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47448002 57 + 50890351 GCA------CCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769199 57 + 49145316 GCG------CCATGGCCCCCAAACTCTTCGCCGTCCTGTGTCTGGGTGAGTCCTGGAAGGGAA i calJac3.chr22 T 3495 C 0 e macFas5.chr19 55644263 5946 + 59248254 I a score=17153.000000 s hg38.chr19_GL949748v2_alt 812695 15 + 1064304 TAGAGGGAGGGAGCG s panTro4.chr19 59702955 15 + 63644993 TAGAGGGAGGGAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647591 15 + 60714840 TAGAGGGAGGGAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236524 15 - 106955855 TCGAGGGAGGGAGTG i nomLeu3.chr10 C 0 I 43 s rheMac3.chr19 60521914 15 + 64156825 TCGAGGGAGGGAGCA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47448059 15 + 50890351 TCGACAGAGGAAGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769256 12 + 49145316 ---AGGAGGGCAGGG i calJac3.chr22 C 0 C 0 e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=11591.000000 s hg38.chr19_GL949748v2_alt 812710 12 + 1064304 TGGGGATGGAGA s panTro4.chr19 59702970 12 + 63644993 CGGGGATGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647606 12 + 60714840 CAGGGATGGAGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521929 12 + 64156825 CTGGGGTGGATA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47448074 12 + 50890351 CTGGGGTGGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769268 12 + 49145316 TTGGGATGGAAA i calJac3.chr22 C 0 I 795 e nomLeu3.chr10 103236539 43 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=1910.000000 s hg38.chr19_GL949748v2_alt 812722 2 + 1064304 TC s panTro4.chr19 59702982 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647618 2 + 60714840 TC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521941 2 + 64156825 TC i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47448086 2 + 50890351 TC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=23896.000000 s hg38.chr19_GL949748v2_alt 812724 53 + 1064304 TGGGCCCAGAGGTGGAGATATGGGCCTGGAGGTGGAGTTATGGGCCTGGAGTG s panTro4.chr19 59702984 53 + 63644993 TGGGCCCAGAGGTGGAGATATGGGTCTGGAGGTGGAGTTATGGGCCTGGAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647620 53 + 60714840 TGGGCTCAGAGGTGGAGATATGGGTCTGGAGGTGGAGTTATGGGCCTGGAGTG i ponAbe2.chr19 C 0 T 72005 s chlSab2.chr6 47448088 50 + 50890351 TGGGCCT--GGGTGGAGATCTGGGCCTGGAGG-GGAGATATGGGCCTGGGGTG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=1825.000000 s hg38.chr19_GL949748v2_alt 812777 13 + 1064304 GAGATC-------------------TGGGCCT s panTro4.chr19 59703037 32 + 63644993 GAGATCTGGGCCTGGAGTGGATATATGGGCCT i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47448138 13 + 50890351 GAGATC-------------------TGGGCCT i chlSab2.chr6 C 0 I 32752 e ponAbe2.chr19 56647673 72005 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=1936.000000 s hg38.chr19_GL949748v2_alt 812790 24 + 1064304 AGAGATGGAGTGATGAGCCTAGAA s panTro4.chr19 59703069 24 + 63644993 AGAGATGGAGTGATGGGGCTAGAA i panTro4.chr19 C 0 T 60291 e ponAbe2.chr19 56647673 72005 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e chlSab2.chr6 47448151 32752 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=0.000000 s hg38.chr19_GL949748v2_alt 812814 12 + 1064304 GTGGAGATCTGC e ponAbe2.chr19 56647673 72005 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e chlSab2.chr6 47448151 32752 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C e panTro4.chr19 59703093 60291 + 63644993 T a score=300.000000 s hg38.chr19_GL949748v2_alt 812826 1 + 1064304 G s panTro4.chr19 59642802 1 + 63644993 G i panTro4.chr19 T 60291 C 0 s ponAbe2.chr19 56575668 1 + 60714840 G i ponAbe2.chr19 T 72005 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e chlSab2.chr6 47448151 32752 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=20594.000000 s hg38.chr19_GL949748v2_alt 812827 44 + 1064304 CCTGGAGTGGAGATCTGGGCCTGGA-GTGAAGATCTGGGCCTGGA s panTro4.chr19 59642803 44 + 63644993 CCTGGAGTGGAGATCTGGGCCTGGA-GTGGAGATATGGGCCTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575669 45 + 60714840 CCTGGAGTGGAGATATGAGCCTGGAGGTGGAGATATGGGCCTGGA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47480903 44 + 50890351 CCTGGAGTGGAGATCTGTTCCTGGA-GTAGAGATATGGGCCTGGA i chlSab2.chr6 I 32752 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236539 43 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=16744.000000 s hg38.chr19_GL949748v2_alt 812871 19 + 1064304 GTGGAGATATGGGCCTGGA s panTro4.chr19 59642847 19 + 63644993 GTGGAGGTATAGGCCTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575714 19 + 60714840 GTGGAGATATGGGCCTGGA i ponAbe2.chr19 C 0 I 71940 s nomLeu3.chr10 103236582 19 - 106955855 GTGGAGATATGGGCCTGGA i nomLeu3.chr10 I 43 C 0 s chlSab2.chr6 47480947 19 + 50890351 GTGGAGATATGGGTCTGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=38.000000 s hg38.chr19_GL949748v2_alt 812890 1 + 1064304 G s nomLeu3.chr10 103236601 1 - 106955855 A i nomLeu3.chr10 C 0 T 63 s chlSab2.chr6 47480966 1 + 50890351 G i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56575733 71940 + 60714840 I e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C e panTro4.chr19 59642866 0 + 63644993 C a score=3937.000000 s hg38.chr19_GL949748v2_alt 812891 70 + 1064304 TGGGGATAGGAACCTGGAGTGGAGAGAGGAACCTGGAGGAGAGATAGGAACCTGGAGGGGAGGTAGGAGC s chlSab2.chr6 47480967 70 + 50890351 TGGAGACATGGGTCTGGAGTGGAGATATGGTTCTGGAGAGGAGATATGAGCCTGGAGAGGAGATATGAGC i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56575733 71940 + 60714840 I e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236602 63 - 106955855 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C e panTro4.chr19 59642866 0 + 63644993 C a score=7901.000000 s hg38.chr19_GL949748v2_alt 812961 19 + 1064304 CTAGGGTGGAGATATGGGA s panTro4.chr19 59642866 14 + 63644993 -----GTGGAGATATGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647673 11 + 60714840 --------GAGATAGGAAC i ponAbe2.chr19 I 71940 C 0 s nomLeu3.chr10 103236539 19 - 106955855 CTGGGGTGGAGATCTGGGC i nomLeu3.chr10 T 63 C 0 s chlSab2.chr6 47481037 19 + 50890351 CTGGGGTGGAGATATGGGT i chlSab2.chr6 C 0 T 11350 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=58440.000000 s hg38.chr19_GL949748v2_alt 812980 83 + 1064304 CTGGAGTGGAGATATGGGACTGGAGTGGAGATATGGGCCTGGAG-TGGAGTTATGGGCCTGGAGTGAAGTTATGGGCCTGGAGG s panTro4.chr19 59642880 84 + 63644993 CTGGGGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTAGAGATATGGGCCTGGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647684 83 + 60714840 CTGGATGGGAGATAGGAGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGTTACGGGCCTGCAGTAGAGATGCGGGCCTGGAGG i ponAbe2.chr19 C 0 T 16846 s nomLeu3.chr10 103236558 84 - 106955855 CTGGAGTGGAGATCTGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATACGGGCCTGGAAC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47469706 83 + 50890351 CTGGAGGGGAGATATGGTCCTGGGGTGGAGATATGGGCTTGGAG-TGGAGATATGGGCCTAGAGTGTAGATATGGGCCTGGAAC i chlSab2.chr6 T 11350 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=3928.000000 s hg38.chr19_GL949748v2_alt 813063 9 + 1064304 TGGAGATAC s panTro4.chr19 59642964 9 + 63644993 TGTAGATAT i panTro4.chr19 C 0 I 76696 s nomLeu3.chr10 103236642 9 - 106955855 TGTAGATAC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47469789 9 + 50890351 TGTAGATAT i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=1800.000000 s hg38.chr19_GL949748v2_alt 813072 3 + 1064304 GGG s panTro4.chr19 59719669 3 + 63644993 GGG i panTro4.chr19 I 76696 C 0 s nomLeu3.chr10 103236651 3 - 106955855 GGG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47469798 3 + 50890351 GGG i chlSab2.chr6 C 0 T 21577 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=33392.000000 s hg38.chr19_GL949748v2_alt 813075 70 + 1064304 CCTGGAGTGGAGATATGAGCCTGGAGTGGAGATATGGTCCTGGAGTGGAGATATGGGCCTGGAGTGGAGA s panTro4.chr19 59719672 70 + 63644993 CCTGGAGTGGAGATATGGGTCTGATGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236654 70 - 106955855 CCTGGAATGGAGATCTGGGCCTGGAGTGGAGACACGGGCCTGGAGTGGAGATACGGGCCTGGAGTGGAGA i nomLeu3.chr10 C 0 I 175 s chlSab2.chr6 47448224 70 + 50890351 CCTGGAGTAGAGACATGAGCGTGGAGTGGAGATACGGGTCTAGAGTGGAGATATGGGCCTGGAGTGGAGA i chlSab2.chr6 T 21577 C 0 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=768.000000 s hg38.chr19_GL949748v2_alt 813145 3 + 1064304 TAT s panTro4.chr19 59719742 3 + 63644993 TCT i panTro4.chr19 C 0 I 47434 s nomLeu3.chr10 103236899 3 - 106955855 TGT i nomLeu3.chr10 I 175 C 0 s chlSab2.chr6 47448294 3 + 50890351 TAT i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=929.000000 s hg38.chr19_GL949748v2_alt 813148 4 + 1064304 GGGT s nomLeu3.chr10 103236902 4 - 106955855 GGGC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47448297 4 + 50890351 GGGT i chlSab2.chr6 C 0 I 21578 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C e panTro4.chr19 59719745 47434 + 63644993 I a score=723.000000 s hg38.chr19_GL949748v2_alt 813152 4 + 1064304 CTGC s nomLeu3.chr10 103236906 4 - 106955855 CTGG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47469879 4 + 50890351 CTGG i chlSab2.chr6 I 21578 C 0 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C e panTro4.chr19 59719745 47434 + 63644993 I a score=590.000000 s hg38.chr19_GL949748v2_alt 813156 20 + 1064304 A-GTGGAGTTATGGGCCTGGA s panTro4.chr19 59767179 21 + 63644993 AAGTTGAGTTATGGGCCTGAA i panTro4.chr19 I 47434 T 75437 s nomLeu3.chr10 103236910 21 - 106955855 AACTGTAGATATGGGCCTGGA i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47469883 6 + 50890351 ------AGGTAG--------- i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=438.000000 s hg38.chr19_GL949748v2_alt 813176 7 + 1064304 GTGAAGT s nomLeu3.chr10 103236931 7 - 106955855 GTGGAGA i nomLeu3.chr10 C 0 T 214 s chlSab2.chr6 47469889 3 + 50890351 ----AGA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56647767 16846 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C e panTro4.chr19 59767200 75437 + 63644993 T a score=1820.000000 s hg38.chr19_GL949748v2_alt 813183 2 + 1064304 TA s panTro4.chr19 59691763 2 + 63644993 TA i panTro4.chr19 T 75437 C 0 s ponAbe2.chr19 56630921 2 + 60714840 TA i ponAbe2.chr19 T 16846 C 0 s nomLeu3.chr10 103236724 2 - 106955855 TA i nomLeu3.chr10 T 214 C 0 s chlSab2.chr6 47469892 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521943 0 + 64156825 C a score=20605.000000 s hg38.chr19_GL949748v2_alt 813185 20 + 1064304 TGGGCCTGGAGGTGGAGATA s panTro4.chr19 59691765 20 + 63644993 TGGGCCTGGAGGTAGAGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630923 20 + 60714840 TAGGCCTGGAGGTGGACTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236726 20 - 106955855 TGGGCCTGGAACTGTAGATA i nomLeu3.chr10 C 0 T 143 s rheMac3.chr19 60521943 20 + 64156825 TGGGCCTGGAGGTAAAGATA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47469894 20 + 50890351 TGGGCCTGGAGGTGGAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=5689.000000 s hg38.chr19_GL949748v2_alt 813205 11 + 1064304 TGGGCCTGGAG s panTro4.chr19 59691785 11 + 63644993 TGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630943 11 + 60714840 TGGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521963 5 + 64156825 TGGGC------ i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47469914 11 + 50890351 TGGGCCTAGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236746 143 - 106955855 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=10561.000000 s hg38.chr19_GL949748v2_alt 813216 28 + 1064304 TGGAGATATGGGACTAGAGTGGAGATAG s panTro4.chr19 59691796 28 + 63644993 TGGAGATCTGGGCCTGGAGTGGAGATAG i panTro4.chr19 C 0 I 75376 s nomLeu3.chr10 103236603 28 - 106955855 TGTAGATATGGGCCTGGAGTGGAGATAC i nomLeu3.chr10 T 143 C 0 s chlSab2.chr6 47469925 27 + 50890351 TATAGATACGGGACTGGAGTGGAGATA- i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56630954 0 + 60714840 C e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521968 0 + 64156825 C a score=851.000000 s hg38.chr19_GL949748v2_alt 813244 10 + 1064304 GGGCCTGGAG s nomLeu3.chr10 103236631 10 - 106955855 GGGCCTGGAA i nomLeu3.chr10 C 0 C 0 e ponAbe2.chr19 56630954 0 + 60714840 C e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47469952 0 + 50890351 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521968 0 + 64156825 C e panTro4.chr19 59691824 75376 + 63644993 I a score=5247.000000 s hg38.chr19_GL949748v2_alt 813254 14 + 1064304 GTGGAGATCTGGGC s panTro4.chr19 59767200 14 + 63644993 GTGGAGATCTGGGC i panTro4.chr19 I 75376 C 0 s ponAbe2.chr19 56630954 13 + 60714840 -TGGAGATCTAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236641 14 - 106955855 CTGTAGATACGGGC i nomLeu3.chr10 C 0 T 116 e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47469952 0 + 50890351 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60521968 0 + 64156825 C a score=26894.000000 s hg38.chr19_GL949748v2_alt 813268 37 + 1064304 CTGGAGTGGAGATCTGGGCCTGGAGTGGAGATCTGGG s panTro4.chr19 59767214 37 + 63644993 CTGGAGTGGAGATATGATCCTGGAGTGGAGATCTGGG i panTro4.chr19 C 0 T 64158 s ponAbe2.chr19 56630967 37 + 60714840 CTGGAGTGGAGATCTGGGCCTGGAGTGGACATCTGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236539 37 - 106955855 CTGGGGTGGAGATCTGGGCCTGGAGTGGAGATCTGGG i nomLeu3.chr10 T 116 C 0 s rheMac3.chr19 60521968 18 + 64156825 -------------------CTGAGGTGGAGATACGAG i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47469952 23 + 50890351 --------------TGGGTCTGGAGTGGAGATCTGGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=22792.000000 s hg38.chr19_GL949748v2_alt 813305 25 + 1064304 CCTGGAGTGGAGATATGGGCCTGGA s ponAbe2.chr19 56631004 25 + 60714840 CCTGGAGTGGAGATCTGGGCCTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236576 25 - 106955855 CCTGGAGTGGAGATATGGGCCTGGA i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60521986 25 + 64156825 CCTGGAGTGGAGATATGGGCCTGGA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47469975 25 + 50890351 CCTGGGGTGGAGATATGGGCCTGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e panTro4.chr19 59767251 64158 + 63644993 T a score=13505.000000 s hg38.chr19_GL949748v2_alt 813330 13 + 1064304 GTGGAGATATGGG s panTro4.chr19 59703093 13 + 63644993 GTGGAGATATGGG i panTro4.chr19 T 64158 C 0 s ponAbe2.chr19 56631029 13 + 60714840 GTAGAGTTACGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236602 13 - 106955855 CTGTAGATATGGG i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60522011 13 + 64156825 GTGGAGATATAGG i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47470000 13 + 50890351 GTGGAGATATGGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=4187.000000 s hg38.chr19_GL949748v2_alt 813343 7 + 1064304 TCTGCAG s panTro4.chr19 59703106 7 + 63644993 TCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631042 7 + 60714840 CCTGCAG i ponAbe2.chr19 C 0 I 16718 s nomLeu3.chr10 103236615 7 - 106955855 CCTGGAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47470013 7 + 50890351 CCTGGGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=24200.000000 s hg38.chr19_GL949748v2_alt 813350 33 + 1064304 TGGAGATATGGGCCTGGAGGTGGAGATATGGGC s panTro4.chr19 59703113 33 + 63644993 TGGAGATATGGGCCTGGAGGTGGAGATATGGGC i panTro4.chr19 C 0 T 60053 s ponAbe2.chr19 56647767 33 + 60714840 TGGAGATATGGGCCTAGAGGTGGATATCTGGGC i ponAbe2.chr19 I 16718 C 0 s nomLeu3.chr10 103236622 33 - 106955855 TGGAGATACGGGCCTGGAACTGTAGATACGGGC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47470020 32 + 50890351 TGGAGATATGGGCCTGG-GGTGGAGATATGGGC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=45476.000000 s hg38.chr19_GL949748v2_alt 813383 76 + 1064304 CTGGAG-TGGAGTTATGGGCCTGGAGTGAAGTTATGGGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATA-TGGG s panTro4.chr19 59643093 77 + 63644993 CTGCAG-TGTAGATATGGGCCTGGAGTAGAGATATGGGCCTGGAACTATAGATATGGGCCTGGAGTGGAGATATTGGG i panTro4.chr19 T 60053 I 32136 s ponAbe2.chr19 56647800 73 + 60714840 CTGCAG-TGGAGATATGGGCCTGGGATGGAGATATGGGCCTAGAGGTGGAGTTACAGGCCTGCAGTAGAGATA-T--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236655 75 - 106955855 CTGGAA-TGGAGATCTGGGCCTGGAGTGGAGACACGGGCCTGGAG-TGGAGATACGGGCCTGGAGTGGAGATA-TGGG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47470052 76 + 50890351 CTGGAACTGTAGATATGGGCCTGGAGTGAAGATATGAGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATA-TGG- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=639.000000 s hg38.chr19_GL949748v2_alt 813459 26 + 1064304 ACTAGAG-TGGAGATAGGGGCCTGGAG s ponAbe2.chr19 56647873 10 + 60714840 -----------------GGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236730 27 - 106955855 CCTGGAACTGTAGATATTGGCCTGGAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47470128 8 + 50890351 -------------------GTGTGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C e panTro4.chr19 59643170 32136 + 63644993 I a score=20618.000000 s hg38.chr19_GL949748v2_alt 813485 32 + 1064304 GTGGAGATCTGGGCCTGGAG-TGGAGATATGGC s panTro4.chr19 59675306 32 + 63644993 GTGGATATCTGGGCCTGGAG-TGGAGATAGGAA i panTro4.chr19 I 32136 C 0 s ponAbe2.chr19 56647883 32 + 60714840 GTGGAGATCTGTGCCTGGAG-TGGAGATATGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236757 32 - 106955855 -TGGAGATATGGGCCTGGAACTGTAGATATGGG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47470136 32 + 50890351 GTGGAGATATGGGCCTAGAG-TGTAGATATGGG i chlSab2.chr6 C 0 T 96303 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=19378.000000 s hg38.chr19_GL949748v2_alt 813517 29 + 1064304 CCTGGAGTGGAGATATGGGCCTGGAGTGG s panTro4.chr19 59675338 29 + 63644993 TCTGGAAGGGAGATAGGAGCCTGGACTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647915 29 + 60714840 CCTGGATTGGAGATATGGGCCTGGAGTGG i ponAbe2.chr19 C 0 T 37562 s nomLeu3.chr10 103236789 29 - 106955855 CCTGGAGTAGAGATATGGGCCTGGAACTG i nomLeu3.chr10 C 0 I 1 s chlSab2.chr6 47373865 29 + 50890351 cctgaggtggagatataggcctggAGTGG i chlSab2.chr6 T 96303 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=48993.000000 s hg38.chr19_GL949748v2_alt 813546 78 + 1064304 AGATATGAGCCTGGAGTGGAGATATGGCCCTGGAGTGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAGTGGA s panTro4.chr19 59675367 61 + 63644993 AGATATTGGCCTGGGGTGGACATATGAGACTGGAGTGGAGACATGGGCCTGGAGGTGGAGA----------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610382 78 + 60714840 AGATATGGGCCTGGAGTGCAGATATGGGCCAGGAGTGGAGATGTGGGTCTAGAGGTGGATATCTGGGCCTGGAGTGGA i ponAbe2.chr19 T 37562 I 75206 s nomLeu3.chr10 103236819 78 - 106955855 AGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTAGAGTGGA i nomLeu3.chr10 I 1 C 0 s chlSab2.chr6 47373894 78 + 50890351 AGATATGGGCCTGGGGTGGAGATATGAGCCTGGAGTGGAGACATGGGCCTGGAGCTTTAGATATGGGCCTGGAATGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=2168.000000 s hg38.chr19_GL949748v2_alt 813624 18 + 1064304 GTTATGGGCCTGGAGTGA- s nomLeu3.chr10 103236897 18 - 106955855 GATGTGGGCCTGGAACTG- i nomLeu3.chr10 C 0 I 1 s chlSab2.chr6 47373972 19 + 50890351 GATATGGGCCTGGAGATAG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56610460 75206 + 60714840 I e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C e panTro4.chr19 59675428 0 + 63644993 C a score=10382.000000 s hg38.chr19_GL949748v2_alt 813642 16 + 1064304 AGTTATGGGCCTGGAG s panTro4.chr19 59675428 13 + 63644993 ---TATGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685666 16 + 60714840 AGTTATGGGCCTGAAG i ponAbe2.chr19 I 75206 T 54576 s nomLeu3.chr10 103236916 16 - 106955855 AGATATGGGCCTGGAG i nomLeu3.chr10 I 1 C 0 s chlSab2.chr6 47373991 15 + 50890351 AGATATGGGCCTGGA- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=32551.000000 s hg38.chr19_GL949748v2_alt 813658 59 + 1064304 GTGGAGATATGGGCCTGGAG-TGGAGATATGGGACTAGAGTGGAGATACGGGCCTGGAGG s panTro4.chr19 59675441 59 + 63644993 GTGGAGATATGGGCCTGGAGGTGGAGTTACGGGCCTCTAGTAGACATACGGGCCTGGAG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631106 59 + 60714840 GTGGATATCTGGGCCTGGAG-TGGAGATATGGGCCTAGGATGGAGATATGGGTCTGGCTG i ponAbe2.chr19 T 54576 I 54517 s nomLeu3.chr10 103236932 59 - 106955855 -TGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAAC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47374006 59 + 50890351 GTGGAGATATTGTCTTGGAG-TGCAAATATGTACCTGGAATGGAGATACGGGCCTGGAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=20635.000000 s hg38.chr19_GL949748v2_alt 813717 31 + 1064304 TGGAGATCTGGGCCTGGAG-TGGAGATATGGC s panTro4.chr19 59675500 31 + 63644993 TGGAGACATGGGCCTGGAG-TGGAGATATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685682 31 + 60714840 TGGAGATCTGGGCCTGGAG-TGGAGATATGAT i ponAbe2.chr19 I 54517 C 0 s nomLeu3.chr10 103236991 32 - 106955855 TGTAGATATGGGCCTGGAACTGTAGATATGGG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47374065 32 + 50890351 TGGAGATATGGGCCTGGAACTGTAGATATGGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522024 0 + 64156825 C a score=1500.000000 s hg38.chr19_GL949748v2_alt 813748 1 + 1064304 C s panTro4.chr19 59675531 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685713 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237023 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522024 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47374097 1 + 50890351 C i chlSab2.chr6 C 0 I 74203 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=29962.000000 s hg38.chr19_GL949748v2_alt 813749 25 + 1064304 CTGGAGTGGAGATATGGGCCTGGAG s panTro4.chr19 59675532 25 + 63644993 CTGGAGTGGAGATATGGGCCTGGAG i panTro4.chr19 C 0 I 91720 s ponAbe2.chr19 56685714 25 + 60714840 CTGGAGTGGAGATATGGGCCTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237024 25 - 106955855 TTAGAGTGTAGATGTGGGCCTGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522025 25 + 64156825 CTGGAGTGGAGATATGGGCCTGGGG i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47448301 25 + 50890351 TTGGTGTGGAGATATGGGCCTAGGG i chlSab2.chr6 I 74203 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=113288.000000 s hg38.chr19_GL949748v2_alt 813774 130 + 1064304 TGGAGATATGAGCCTGGAGTGGAGATATGGCCCTGGA-GTGGAGATATGGGCCTGGAGTGGAGATATGAGCCTGGAG-TGGAGATATGGCCCTGGAG-TGGAGATATGGGCCTGGAGTGGAGATATGGGCCTG s panTro4.chr19 59767277 130 + 63644993 CAGAGATACAAGCCTGGAGTGGAGATATGGGCCAGGA-GTGGAGATCTGGGCCTGGAGTAGAGACATCAGCCTGGAG-TGGAGATATGGGCCTGGAG-TGGAGATAGGGGCCTGGAGTGGAGATCTGGGCCTG i panTro4.chr19 I 91720 T 64261 s ponAbe2.chr19 56685739 130 + 60714840 TGGAGATACAGGCCTGGAGCAGAGATACAAGCCTTGA-GTGGAGATATGGGCCTGGAGTTGAGAGAGGAGCCTGGAG-TGGAGTTATGGGCCTGGAG-TGGAGACATCAGCCTGGAGAGGAGATATGGGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237049 113 - 106955855 TGGAGATATGGGCCTGGAAC-------------------TATAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522050 129 + 64156825 TGGAGATATGAGCCTGGAGTGGAGACATGGGCCTGGAGCTTTAGATATGGGCCTGGAATGGAGATATGGGCCTGGAGATAGAGATATGGGCCTGGAG-TGGAGATACTGGCTTGGAATGCAAGTATGGGC--- i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47448326 130 + 50890351 TTGAGATATGGGCCTGGAGTGGAGATATTAGCCTGGA-TTGGAGATAAGGGTTTGGAGTGGAGATATGAGCCTGGAG-TACAGATATGAGCCTGGAG-TGGAGATATCAGCATGGAGCGGACATGTGGGCCTG i chlSab2.chr6 C 0 I 32508 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=2441.000000 s hg38.chr19_GL949748v2_alt 813904 16 + 1064304 GAGTGGACATATGGGT s ponAbe2.chr19 56685869 16 + 60714840 GAATGGAGATTCAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237162 16 - 106955855 GAGTGGAGATATGGGC i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47448456 32508 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522179 0 + 64156825 C e panTro4.chr19 59767407 64261 + 63644993 T a score=59822.000000 s hg38.chr19_GL949748v2_alt 813920 63 + 1064304 CTGGAGTGGAGATACGGGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGA s panTro4.chr19 59703146 63 + 63644993 CTAGAGTGGAGATATGAGCCTGGAGATGGAGATATGGGCCTGGAGTGGATATATGGGCCTGGA i panTro4.chr19 T 64261 C 0 s ponAbe2.chr19 56685885 62 + 60714840 CTGAAGTGGAGATCTGGGCCTAGAG-CGGAGATCTGGGCCTGTTGTGTAGATCTAGGCCTGGA i ponAbe2.chr19 C 0 T 38003 s nomLeu3.chr10 103237178 63 - 106955855 CTGGAGTGGAGATATGGACCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCTGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522179 63 + 64156825 CTGGAATGAAGATACGGGCCTGGAGGTGGAGATATGGGCCTAGAGTGTAGATAGGGGCCTGGA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47480964 59 + 50890351 ---GAGTGGAGACATGGGTCTGGA-GTGGAGATATGGTTCTGGAGAGGAGATATGAGCCTGGA i chlSab2.chr6 I 32508 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=-2569.000000 s hg38.chr19_GL949748v2_alt 813983 2 + 1064304 GG- s panTro4.chr19 59703209 2 + 63644993 GG- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237241 1 - 106955855 -A- i nomLeu3.chr10 C 0 T 96 s rheMac3.chr19 60522242 2 + 64156825 -AC i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47481023 2 + 50890351 -GA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=16706.000000 s hg38.chr19_GL949748v2_alt 813985 55 + 1064304 TGGTGATATGGGCCTGGAGTGTAGACATGGGCC--GAGTGGAGATATGGGTCTGGAG s panTro4.chr19 59703211 57 + 63644993 TGGTGATATGGGCATGGAGTGTAGATAtgggcctggagtggagatatgggtctggag i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60522244 38 + 64156825 -------------------TGTAGATATGGGCCTGGAGTGGAGATATGGGTCTGGAG i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47481025 37 + 50890351 --------------------GGAGATATGAGCCTGGGGTGGAGATATGGGTCTGGAG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237242 96 - 106955855 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=16856.000000 s hg38.chr19_GL949748v2_alt 814040 19 + 1064304 TGGAGATATGGGCCTGGAG s panTro4.chr19 59703268 19 + 63644993 tggagatatgggcctgaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237146 19 - 106955855 TGGAGATATGGGCCTGGAG i nomLeu3.chr10 T 96 C 0 s rheMac3.chr19 60522282 19 + 64156825 TGGAGATATGGGCCTGGAG i rheMac3.chr19 C 0 I 11 s chlSab2.chr6 47481062 19 + 50890351 TGCAGATATGGGCCTGGAG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=9858.000000 s hg38.chr19_GL949748v2_alt 814059 20 + 1064304 TGGAGATATGGGACTGGAGT s panTro4.chr19 59703287 20 + 63644993 tggagatatgggactggagt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237165 20 - 106955855 TGGAGATATGGGCCTGGAGT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47481081 20 + 50890351 TGGAGATATGGGTCTGGAGA i chlSab2.chr6 C 0 I 178 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=1446.000000 s hg38.chr19_GL949748v2_alt 814079 5 + 1064304 GGAGA s panTro4.chr19 59703307 5 + 63644993 ggaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237185 5 - 106955855 GGAGA i nomLeu3.chr10 C 0 T 213 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47481101 178 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 814084 2 + 1064304 TA s panTro4.chr19 59703312 2 + 63644993 ta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236977 2 - 106955855 TA i nomLeu3.chr10 T 213 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47481101 178 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=8653.000000 s hg38.chr19_GL949748v2_alt 814086 29 + 1064304 TAGGCATGGGG-TGGAGACATGGGCCGGGA s panTro4.chr19 59703314 29 + 63644993 tgggcgtgggg-tggagatatgggactgga i panTro4.chr19 C 0 I 1 s nomLeu3.chr10 103236979 30 - 106955855 TGGGCCTGGAACTGTAGATATGGGCCTGGA i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47481279 29 + 50890351 TGAGCATGGAG-AGGAGATGGGAGCCTGGA i chlSab2.chr6 I 178 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=38.000000 s hg38.chr19_GL949748v2_alt 814115 1 + 1064304 G s nomLeu3.chr10 103237009 1 - 106955855 A i nomLeu3.chr10 C 0 I 233 s chlSab2.chr6 47481308 1 + 50890351 G i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I e panTro4.chr19 59703343 1 + 63644993 I a score=8397.000000 s hg38.chr19_GL949748v2_alt 814116 49 + 1064304 TGGAGATATGGGACTGGAGTGGAGATACGGGCGTGGGG-TGGAGATATGT s nomLeu3.chr10 103237243 50 - 106955855 TGTAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGG i nomLeu3.chr10 I 233 T 458 s chlSab2.chr6 47481309 49 + 50890351 TGGACATATGGGACTGGGGTGGAGATATGAACCTGGAG-TGCAGATATTA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I e panTro4.chr19 59703343 1 + 63644993 I a score=882.000000 s hg38.chr19_GL949748v2_alt 814165 9 + 1064304 GCCTGGAGG s chlSab2.chr6 47481358 9 + 50890351 GCCTGGAGG i chlSab2.chr6 C 0 T 266 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237293 458 - 106955855 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I e panTro4.chr19 59703343 1 + 63644993 I a score=1492.000000 s hg38.chr19_GL949748v2_alt 814174 19 + 1064304 TGGAGATATGGGCGTGGGT s panTro4.chr19 59703344 19 + 63644993 tggagatatgggcatgggg i panTro4.chr19 I 1 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237293 458 - 106955855 T e chlSab2.chr6 47481367 266 + 50890351 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=273.000000 s hg38.chr19_GL949748v2_alt 814193 1 + 1064304 T s panTro4.chr19 59703363 1 + 63644993 t i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236835 1 - 106955855 T i nomLeu3.chr10 T 458 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47481367 266 + 50890351 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=17606.000000 s hg38.chr19_GL949748v2_alt 814194 37 + 1064304 GGAGATATGGGCCTGGAGTGGAGATATGGGCGTGGGG s panTro4.chr19 59703364 37 + 63644993 ggagatatgggccgggagtggagatatgggcatgggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236836 37 - 106955855 GGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAA i nomLeu3.chr10 C 0 T 174 s chlSab2.chr6 47481101 37 + 50890351 AGAGATATGAGCCTGGAGAGGAGATATGGGCCTGGGG i chlSab2.chr6 T 266 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=16226.000000 s hg38.chr19_GL949748v2_alt 814231 37 + 1064304 TGGAGATATGGATCTGGAGTGGAGACATGGGCATGGG s panTro4.chr19 59703401 37 + 63644993 tggagatatgggactcgagtggaaatatgggcatggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236699 37 - 106955855 TGGAGATACGGGCCTGGAGTGGAGATATGGGCCTGGA i nomLeu3.chr10 T 174 I 507 s chlSab2.chr6 47481138 37 + 50890351 TTGAGATATGGGTCTGGAGTGGAGATATGGGCCTGGA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=4684.000000 s hg38.chr19_GL949748v2_alt 814268 20 + 1064304 GTGGAGATATGGGCCTGGTG s panTro4.chr19 59703438 20 + 63644993 gtggagatatgggccgggag i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47481175 20 + 50890351 GTGGAGATATGGGTCTGGAG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103236736 507 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=239.000000 s hg38.chr19_GL949748v2_alt 814288 3 + 1064304 TGT s panTro4.chr19 59703458 3 + 63644993 tgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237243 3 - 106955855 TGT i nomLeu3.chr10 I 507 C 0 s chlSab2.chr6 47481195 3 + 50890351 AGG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685947 38003 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=52710.000000 s hg38.chr19_GL949748v2_alt 814291 88 + 1064304 AGATATGGGCCTGGAGTGGAGATATGGCCCTGGAG-TGGAGATATGGGCCTGGAGTGGAGATCTGGGCCTAC-GGTGGAGATATGGGCCT s panTro4.chr19 59703461 88 + 63644993 agatatgggcgtcgggtggagatatgggCCGGGAG-TGGAGATATGGGCATCGGGTGGAGATATGGGACTGG-AGTGGAGATATGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647944 88 + 60714840 AGATATGGGCCAAGGGTGGAGATCTGAGCCTGGAT-TGGAGATATGGGTCTGGATTGGAGATATGGGCCTAG-GGTGGAAATATCGGCCT i ponAbe2.chr19 T 38003 C 0 s nomLeu3.chr10 103237246 90 - 106955855 AGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGCGGAGATCTGGGCCTGCAGGTGGAGACATGGGCCT i nomLeu3.chr10 C 0 T 310 s chlSab2.chr6 47481198 86 + 50890351 AGATATGAGCCTGGAGAGGAGATATGGGCCTGGGG-TGGAGATAGAGGCCTGGAGTGGAGATAGGATCCTGC-AGTGGAGATATGAGC-- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=19498.000000 s hg38.chr19_GL949748v2_alt 814379 41 + 1064304 AGGATGGGGATATGGGCCTGGAATGGAGATATGGGCCTGGG s panTro4.chr19 59703549 41 + 63644993 AGGATGGGGATATGGGCCTGGAATGGAGATATGGGCCTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648032 41 + 60714840 GGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGG i ponAbe2.chr19 C 0 T 37580 s nomLeu3.chr10 103237026 41 - 106955855 AGAGTGTAGATGTGGGCCTGGAGTGGAGATATGGGCCTGGA i nomLeu3.chr10 T 310 C 0 e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47481284 0 + 50890351 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=30659.000000 s hg38.chr19_GL949748v2_alt 814420 54 + 1064304 TGTGGAGATATGGGACTGGAGTGGAGATATGGGCCTGATGTGGAGATATGGGCT s panTro4.chr19 59703590 54 + 63644993 TGTGTAGATATTGGACTGGAGTGGAGATATGGGCCTGATGTGGAGATACGGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610493 54 + 60714840 TGGGGAGATATGGGACTGGAGTAGAGATATGGGCCTGAAGTGGAGATATGGGCT i ponAbe2.chr19 T 37580 T 34814 s nomLeu3.chr10 103237067 54 - 106955855 ACTATAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47481284 39 + 50890351 ---------------ATGGAGAGGAGATGGGAGCCTGGAGTGGACATATGGGAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=2133.000000 s hg38.chr19_GL949748v2_alt 814474 5 + 1064304 TGGAG s panTro4.chr19 59703644 5 + 63644993 TGGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237121 5 - 106955855 TGGAA i nomLeu3.chr10 C 0 I 64 s chlSab2.chr6 47481323 5 + 50890351 TGGGG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56610547 34814 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=5612.000000 s hg38.chr19_GL949748v2_alt 814479 25 + 1064304 TGGAGATATGATCCTGGAGTGTAGT s panTro4.chr19 59703649 25 + 63644993 GGGAGATATGATCCTGGAGTGTAGT i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47481328 25 + 50890351 TGGAGATATGAACCTGGAGTGCAGA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56610547 34814 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237126 64 - 106955855 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=12047.000000 s hg38.chr19_GL949748v2_alt 814504 31 + 1064304 TATGGGCCTGGAGGTGGAGATCTGGGCCTGG s panTro4.chr19 59703674 31 + 63644993 TATGGGCCTGGAGGTGGAGATCtgggcctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237190 31 - 106955855 TATGGACCTGGAACTGTAGATATGGGCCTGG i nomLeu3.chr10 I 64 C 0 s chlSab2.chr6 47481353 30 + 50890351 TATTAGCCTGGAGG-GGAGATATGAGCCTGG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56610547 34814 + 60714840 T e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=40009.000000 s hg38.chr19_GL949748v2_alt 814535 54 + 1064304 GGTGGAGATATGGGCCTGGAG-TGGAGATATGGGACTGGAGAGGAGATATGGGAC s panTro4.chr19 59703705 54 + 63644993 ggtggagatatgggcctgggg-tggagatatgggcctggagtggagatatgggac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575733 54 + 60714840 GGTGGAGATTTGGGCCTGGAG-TGGAGATATGGGCCTGGAGTGGAGATACGGGCC i ponAbe2.chr19 T 34814 I 34760 s nomLeu3.chr10 103237221 55 - 106955855 AGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47481383 54 + 50890351 AGTGGAGATATGGGCCTGGAG-GGCAGATAGGAGCCTGGAGGGGAGATATGGGCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=3808.000000 s hg38.chr19_GL949748v2_alt 814589 5 + 1064304 TGGAG s panTro4.chr19 59703759 5 + 63644993 tggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610547 5 + 60714840 TGGGG i ponAbe2.chr19 I 34760 C 0 s nomLeu3.chr10 103237276 5 - 106955855 TGGAA i nomLeu3.chr10 C 0 T 38 s chlSab2.chr6 47481437 5 + 50890351 TGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=23135.000000 s hg38.chr19_GL949748v2_alt 814594 35 + 1064304 TGGAGATATGGGCCTGGAGTGGA-------------------GATATGGGCCTG s panTro4.chr19 59703764 54 + 63644993 tggagatatgggcctggggtggatatctgggcctggagaggagatatgggcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610552 35 + 60714840 TGGAGATCTGGGCCTGGGGTGGA-------------------GATATGGGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237243 35 - 106955855 TGTAGATATGGGCCTGGAGTGGA-------------------GATATGGGCCTG i nomLeu3.chr10 T 38 C 0 s chlSab2.chr6 47481442 35 + 50890351 TAGAGATATCAGCGTGGAGTGGA-------------------CATGTGGGCCTG i chlSab2.chr6 C 0 I 18 e calJac3.chr22 45769280 795 + 49145316 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=23467.000000 s hg38.chr19_GL949748v2_alt 814629 59 + 1064304 G-ATTGGAGATATGGGCCGAGGGTGGAGATCTGAGCCTGGA-TTGGAGATGTGGGCCCGGA s panTro4.chr19 59703818 59 + 63644993 g-agtggagatatgggcctagggtggagatctgagcctgga-ttggagatgtgggcccgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610587 59 + 60714840 G-ATTGGAGATATGGGCCTAAGGTGGAGATCTGTGCCTGGA-TTGGAGATCCGGGCCTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237278 61 - 106955855 GAACTGTAGATATGGGCCTGGAGCGGAGATCTGGGCCTGCAGGTGGAGACATGGGCCTGGA i nomLeu3.chr10 C 0 T 3 e calJac3.chr22 45769280 795 + 49145316 I e chlSab2.chr6 47481477 18 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=15005.000000 s hg38.chr19_GL949748v2_alt 814688 74 + 1064304 TTGGCTATATGGGTCTAGGGTGGAAATATCGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTG s panTro4.chr19 59703877 55 + 63644993 ttggCTATATGGGTCTAGGGTGGAAATATCGGCCTGGAGTGGAGATATGGGC-------------------TTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610646 74 + 60714840 TTGGCGATATGGGCCTAGGGTGGAAATATCGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTG i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e chlSab2.chr6 47481477 18 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 814762 1 + 1064304 G s panTro4.chr19 59703932 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610720 1 + 60714840 G i ponAbe2.chr19 C 0 I 37389 s chlSab2.chr6 47481495 1 + 50890351 G i chlSab2.chr6 I 18 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=1372.000000 s hg38.chr19_GL949748v2_alt 814763 8 + 1064304 GGTGGGGA s panTro4.chr19 59703933 8 + 63644993 GATGGGGA i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47481496 8 + 50890351 GGTGCAGA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56610721 37389 + 60714840 I e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=2911.000000 s hg38.chr19_GL949748v2_alt 814771 9 + 1064304 TATGGGCCT s panTro4.chr19 59703941 9 + 63644993 TATGGACCT i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47744908 9 + 51301725 TACGGGCCT i papAnu2.chr19 I 18 I 2 s chlSab2.chr6 47481504 9 + 50890351 TCTGGATCC i chlSab2.chr6 C 0 T 33021 e ponAbe2.chr19 56610721 37389 + 60714840 I e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=807.000000 s hg38.chr19_GL949748v2_alt 814780 2 + 1064304 GG s panTro4.chr19 59703950 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47744919 2 + 51301725 AG i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47448492 2 + 50890351 GG i chlSab2.chr6 T 33021 C 0 e ponAbe2.chr19 56610721 37389 + 60714840 I e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=11470.000000 s hg38.chr19_GL949748v2_alt 814782 20 + 1064304 AGGCTGGGTCTCTGCACAGC s panTro4.chr19 59703952 20 + 63644993 AGGCTGGGTCTCTGCACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648110 20 + 60714840 AGGCTGGGTCTCTGCACAGC i ponAbe2.chr19 I 37389 C 0 s papAnu2.chr19 47744921 17 + 51301725 ATTCGGGGTCTCCCAAC--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448494 20 + 50890351 AGGCTGGGTCTCTGCACAGC i chlSab2.chr6 C 0 I 35 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=9782.000000 s hg38.chr19_GL949748v2_alt 814802 36 + 1064304 CGAGAGCACTGTTCTTGGGTGCAGGTAGGCTCTGAT s panTro4.chr19 59703972 36 + 63644993 CGAGGGCACTGCTCTTGGGTGCAGGTAGGCACTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648130 36 + 60714840 CGACAGCTGTGTTTTTGGGTGCAGGTAGGCACTGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47744938 34 + 51301725 GGGGAGCCGTGTTCT--GGAGCAAGCGGGTGGTGAG i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e chlSab2.chr6 47448514 35 + 50890351 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=30043.000000 s hg38.chr19_GL949748v2_alt 814838 66 + 1064304 GGTGAGTTTCCCTTCGGCCCAGGAAGGGGCTGGCTATCAAGACTCACAGCCCAGTGGGGGCAGCAA s panTro4.chr19 59704008 66 + 63644993 GGTGAGTTTACCTTCAGCCCAGGAAGGGGCTGACTACCAAGACTCACAGCCCAGTGGGGGCAGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648166 66 + 60714840 GGTGAGTTTACCTTCAGCCCAGCAAGGGCGTGGCTACCAAGACTCACAGACCAGTGGGGGCAGCAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47744972 49 + 51301725 GCTGAGTGAACGTTCAGCCCAGCGAGG-------CGCCCAATGGC---------TGGGAGGAA-AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448549 66 + 50890351 GGTGAGTTTACTTTCAGCCCAAAAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAG i chlSab2.chr6 I 35 C 0 e calJac3.chr22 45769280 795 + 49145316 I e nomLeu3.chr10 103237339 3 - 106955855 T e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=8104.000000 s hg38.chr19_GL949748v2_alt 814904 22 + 1064304 GGAAGG-CCTTGTTTGCCTGCAA s panTro4.chr19 59704074 22 + 63644993 GGAAGG-CCTGGTTTCCCTGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648232 22 + 60714840 GGGAGG-CCTGGTTTGCCTGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237336 15 - 106955855 GGAAGT-GATG-------TACAG i nomLeu3.chr10 T 3 C 0 s papAnu2.chr19 47745021 15 + 51301725 GGCAGG-------TTG-CTGCAG i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47448615 23 + 50890351 GGGAGGCCCTGGTTTGCCTGCAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522301 11 + 64156825 I a score=195158.000000 s hg38.chr19_GL949748v2_alt 814926 127 + 1064304 ATGGATCTTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACAGGAGGGTAAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCC--ACATAAGAGGATTTTCCTGAAAC s panTro4.chr19 59704096 127 + 63644993 ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCTTGGCCACATGAGGGTAAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCC--ACATAAGAGGATTTTCCTGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648254 127 + 60714840 ATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCC--ACATAAGAGGATTTTCCTGAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237351 127 - 106955855 ATGGATCCTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGTGGGTGAGTCCTTCCCCAAACCTTAGGTTGTCATCTCCCC--ACGTAAGATGATTTTCCGGAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522312 127 + 64156825 ATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCC--ACATAAGATGATTTTCTTGAAAC i rheMac3.chr19 I 11 I 254 s papAnu2.chr19 47745038 128 + 51301725 ATGAATAGTTCATCATGATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGGGTGTGGGCACACGTGGGTGAGTCCTTC-CCAAATGATGGGTTGCCATCCCCACCGATACAAGTGAATTTTCCTGAGAA i papAnu2.chr19 I 2 I 18 s chlSab2.chr6 47448638 127 + 50890351 ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGGGTCATCTCCCC--ACCTAAGAGGATTTTCCTGAAAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e macFas5.chr19 55644263 5946 + 59248254 I a score=154784.000000 s hg38.chr19_GL949748v2_alt 815053 191 + 1064304 GGGA--------------------------------------GGGAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGGTGCTCGGCCCACAGTTCCGACCTTG-CCTCCCTGGCCTCTCAACCCCTTGGCAGAGTCAAGTTGTGTGGGGA-CCAGGGTTGGACTAGGGTGTTCAAAGCTGGGTTGTGTGGTGG--GGAAGTGG---------------------------------TAGGAACAGCAGAT s panTro4.chr19 59704223 191 + 63644993 GGGA--------------------------------------GGGAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGGTGCTCGGCCCACAGTTCCGACCTCG-CCTCCCCGGCCTTTCATTTCCTTGGCAGAGTCAAGTTCTGTGGGGA-CCAGGGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGG--GGAAGTGG---------------------------------TGGGAACAGCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648381 191 + 60714840 GCGA--------------------------------------GGGAAGTCCTGTCAAGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGCCCACAGTTCTGACCTTG-CCTCCCTGGCCTTTCATTCCCTTGGCAGAGTCAGGTTCTGTGGGGA-CCAGGGTTAGACCGGGGTGCTCAAAGCTGGGGTGTGTGGTGG--GGAAGTGG---------------------------------TAGGAACAGCAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237478 254 - 106955855 AGGAGGCAGGCAGCACAGGGGGTTGACTGATGGGCTGACCATGGGAAGCCATGT--GGGAATCTCTCATGAACTAGGAAAAGGAAGTCATGGGAAGCTTAG-CCACAGTCCTGTCCTAGCCCTCCCCGGCCTTTCTTTCCCTTGGCTGAGTC------TATGGGGACCCAGGAGGAGACTGAAGTGCTCAAAGCAGCGGTGTGCAGGGA--GGAAGTGGTGTCACCAGCAGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGG- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47745184 246 + 51301725 AGGG-------------------TGGCTGATGGACTGACCGTGGGAAAGCCTGTGGGGAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCGTTCTTCCCTGTGGCTGAGCCTAGCTCTGTGTGGC-CCAGGGAGAGACTTGGGCGCTCAAAGCTGGGGTGTCGGGGGATGGGATATGGTGTCACtggcagaggagggaagggaagcaaTGCTAGGAACAGCAGGT i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47448765 225 + 50890351 AGGA--------------------------------------GGGAAGTCCTGTCAGAGAGTCTCTCATACAATAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCCGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGA-CCGGGGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGA--GGAAGTGGTGTCAGCGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60522439 254 + 64156825 I a score=640563.000000 s hg38.chr19_GL949748v2_alt 815244 432 + 1064304 CCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT--GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTAAGTTTTTTATTTTCATTCAGGCAACTGCTGATATTCCATTCTCAAAGGACATGCCCTCCACTTCATGTCTACCCTGTGTTGTTTTATGTCAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTACGGAGACACCTTGTCTTTGTGGGATGGGTCCTTCCTTTAGCCCTAGGCACCAAGGTGTGATAGCAGCCATAGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGCACA s panTro4.chr19 59704414 431 + 63644993 CCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT--GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCGTTCAGGCATCCACTGATA-TCCATTCACAAAGGACATGCCCTCCACCTCATGTCTACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACGCTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTCAGCCCTGGGCACCAAGTTGTGATAGTAGCCATAGAAACATGGAAAGTGAGGAGAATCTTCTGAGCACAGGGAAGGAGGGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648572 431 + 60714840 CCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT--GGGAAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTCTATTTTCGTTCAGGCATCCGCTGATA-TCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGATGCCATGTCTTTGTGGGATGGGTCCTTCCTTTAGCCCTGGCCACCAAGGTGTGATAACAGCCATAGAAACGTGGAAAGTGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237732 413 - 106955855 CCTCTGAGGACAAGAGCATAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCGGTGTGGCTGCTGTCATTCTACCAGAAAAGGTG-GGGGAACCACAGTCATGACCCTGACATTCCAGATCTTCTAATGGGGGCTCAGCTGTTTATTATGGTTCATGCATTAGCTGATC-----------------ATGCCCTCCATCCTGTGTCTACTTTGTGTTCTTTTCTGTGAGTAATCTTGCAGTATTCAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTCAAAGTTCTCAGCTGACA--TTTGTTGTAGGGAGATGCCATGTCTATGCGGGATGGGTCCTTCCTGTAGCTCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAACATGGAAA-TGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522693 434 + 64156825 CCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGGAACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTGTAGGGAGATGCCATGTCTATGCGAGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCT i rheMac3.chr19 I 254 C 0 s papAnu2.chr19 47745430 431 + 51301725 CCTCTGAGGACAAGAGGGTAAATCACTCTCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTG-GGGGAACCACAGTCACGACCCTGACATTCCAATCCCTCTGATG-GGGCTCAGTTGTTCATTATGGTTCAGGCATTAGCTGATATTCCATCCACAAAGGTCGTACCCTCAGCTGCATGTCTACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGGGTTCCGTACTCAGCACCTGCTCAGAGTTTTCAGCCCATACTTTTGTTGTAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGTCTTAGAAAGATGGAAAG-GGGAAGAATCTTCTAAGCACATGGAGGGAGGGGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448990 419 + 50890351 CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTGCATGACGGTCAGGGCTGCAATGTGGCTGCTGTCATTCTACCAGAAGAGGTG-GGGAAACCACAGCCATGACCCTGACATTCCAAATCTTCTGATGGGGGCTCA-------------GTTCATGCACTGGCTGATATTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCTACTTTGTGGTGTTTTACGTGAGTCATCCTGCAGTATTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGTTCTCAGCTGACACCTTTGTTGTAGGAAGATGCGGTGTCTATGTGGGATGGGTCCCTCCTGTAGCCCCGGACACCCAGGTGTGGTAGGAGCCTTAGAAACATGGAAAG-GGGAAGAATCTTCTGAGCACATGGAGGGAGGGGCG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45769280 795 + 49145316 I e macFas5.chr19 55644263 5946 + 59248254 I a score=281446.000000 s hg38.chr19_GL949748v2_alt 815676 156 + 1064304 GCTCCACATCCTCCTCTCT-AAGGCGGCGCCTCCTTCACCCCAAGGTGGTCAGGACAAGCCCTTGCTTTCTACCTGGCCCAGCCTTGTGGTGCCTCCAGA---ACATGTGACTCTTCAGTGTCACTCTAATCTTGGG---------TTTAACAACTTCAGTCTGTACAA s panTro4.chr19 59704845 156 + 63644993 ACTCCATATCCTCCATTCT-AAAGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGAACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTGTGGTGCCTCTAGG---ACATGTCATTCTTCAGTGTCACTCTTATCTTGGG---------TTTAACAACTTCAGTCTGTACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649003 156 + 60714840 GCTCCACGTCCTCCTCTCT-AAGGCGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGTCCAGCCTTGTGGTGCCTCCAGG---ACATGTGATTCTTCAGTGTCACTCTTATCTTAGG---------TTTAACAACTTCAGTCTCTACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238145 159 - 106955855 GCTCCACATCTTCCTCTCT-AAGGTAGTGCCTCCTTCTTCCCCAGGTGGTCAGGACAGGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTCAAGGAGAACACGTGACTCTTCAGTGTCACTGTCGTCTTGGG---------TCTAACAAATTCAGTCTGTCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523127 160 + 64156825 GCTCCACATCCTCCTCTCTAAAGGCTGTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGG---------TTTACCATCTTCAGTCTGTACAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47745861 159 + 51301725 ACTCCACATCCTCCTCTCT-AAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCGTCCTGGG---------TTTAACATCTTCACGCTGTACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449409 168 + 50890351 GCTCCACATCCTCCTCTCT-AAGGCGGCACCTCCTTCTCCCCCAGGTGATCAGGACAAGCCCTTCCTGTCTGCCCAGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770075 158 + 49145316 GCTCCACACTCCCCTCTCT--AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGG---------TTTGTCACATTCAAAATATACAA i calJac3.chr22 I 795 T 307 e macFas5.chr19 55644263 5946 + 59248254 I a score=75465.000000 s hg38.chr19_GL949748v2_alt 815832 59 + 1064304 GGATGATGGGGTGCCTGTCCCTGAGCTGTACAACAGAATATTCTGGAAAAGCCTTTTCA s panTro4.chr19 59705001 59 + 63644993 GGAAGGTGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649159 59 + 60714840 GGAGGATGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238304 59 - 106955855 GGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAGTATTCTGGAACAGCTTCCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523287 59 + 64156825 GGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47746020 59 + 51301725 GGAAGATGGGGTGCCTGTCCCTGAGCTCTACAAAAGAATATTCTGGAACAGTTTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449577 59 + 50890351 AGATGACAGAAGCCACGTTCCCATCTTCCCCGGCAGAATATTCCAGCAGAGCTTCGTCA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770233 307 + 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I a score=231317.000000 s hg38.chr19_GL949748v2_alt 815891 116 + 1064304 TGGGCCCTGTGACCACGTCACATGCAGGGACCTATACATGCCGGGGTTCACACACACACTCCCCCAGTGGGTGGTCGGCACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAG s panTro4.chr19 59705060 116 + 63644993 TGGGCCCTGTGACCCCAGCACACACAGGGACATACAGATGTCGGGGTTCACACCCACACTCCCCCAGTGGGTGGCCGGCATCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649218 116 + 60714840 TGGGCCCTGTGACCTCAGCACAAGCAGGGACCTACAGATATCAGGGTTCACACCCACACCCCCCCAGTGGGTGGTCGGCATCCAGCAACCCCCTGGTGATCATGGTCACAGTTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238363 116 - 106955855 TGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGTCGGGGTTTTCACCCACACTCCCCCACTAGGTGGTCGGCACCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523346 116 + 64156825 TGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGCTCCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47746079 116 + 51301725 TTAGCCCTGTGACTGCAGCACATGCAGGGACCTACAGATGTCGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGCGATCATGGTCACAGGTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449636 116 + 50890351 TGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGCACTCAGCGACCCCCTGGCGATCAGGGTCACAGGTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3387735 116 - 49145316 TGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAG i calJac3.chr22 n 307 T 458 e macFas5.chr19 55644263 5946 + 59248254 I a score=890996.000000 s hg38.chr19_GL949748v2_alt 816007 578 + 1064304 AGGGCTCCTGTCTGGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTAGGCATGTCCTTGAGGGTCCCATCACGCAGGCCCTAACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataagtgtccccagtgatgactgcattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacagcctggactgtcccggtgggctcagtataatcacaagtgtccacatgaaaggaggaggaagaggagagtggggattagagcagcgtagt----gggagactccatca----------gctttgaaggtggatgaaggccataagccatgaatgcaggtggcctatagaggctgggaaagtcaa-gtaactgattct--cctgagtctccagagggaacacagccctgcagatgccttgattttagccctcgaaaaacagggtccgctttctg-tctccagaatcggagggggtcagtgtgctctctcctgctgccatg s panTro4.chr19 59705176 578 + 63644993 AGGGCTCCTGTCTGGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGAGCGTGTCCTTGAGGGTCCCATCAGGAAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCGgtgctgggaagaataattgtccccaatgatgactacatactaatccctggagtctgttactatttatgttataggggaaggcactgaaggggaagatggagttcagattgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgggctcagtataatcacaagggtccacatgaaaggaggaggaagaggggagtggggattagagcagcgtaat----gggagtctccacca----------actttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattct--cctgagtctccagagggaaagaagccctgcagatggcttgattttagcccaggaaaaccagggtccgatttctg-tccccagaataggaaggtgtcagggtgctctctcctgctgccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649334 578 + 60714840 AGGGCTCCTGTCTGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGTTAAAGGTGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgataactgcattctaatccctggagtctgtgactatttatgttataggggaagggactgcaggggaagatggagctcaggttgttgatgagttaaccttgagatggggagacagcctggactgtcccgctggggtcagtgtaatcacaagggtccacatgaaaggaggaggaagaggggagtggggattagagcagcgtaat----gacagtctccatca----------gctttgaaggtggaggaaggccacgagccatgaatccaggtggcctatagaggctggaaaagtcaa-ggaactgattct--cctgagtctccagagggaacaaagccctgcagatgtcttgattttagcccaggaaaaacagggtccaatttctg-tctccagaagtggaagaggtcagtgtgttctctcctgctgccatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238479 596 - 106955855 AGGCTATCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGACATCCATCAGGGTCCGATCATCCAGGCCCCGACTCTATTTGGGGTAAAGGGGGATTCAGTACAGAGAAATAGGTGCTATGGtgggaagaataattgtccccaatgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttaagatggggagatggcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgagaggaggaggaagaggagagtggggattacagcatcgtagtgggagggagactccatcagccacagcgggctttgaagatggaggaaggccatgagccacaaaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgaagacgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcATTGTATTCTCTCCTGCCACCATG i nomLeu3.chr10 C 0 M 8807 s rheMac3.chr19 60523462 586 + 64156825 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaaaaataggtactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagggagact--------cactacaggctttgaaggtgaaggaaggccacgaaccatgaaggcaggtgg-ctctaagggctggagaagtcaagggaactgattct-ccctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47746195 592 + 51301725 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCACCAGGGTCCCATCATCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCACTGATGGCCACATTGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCGGGGGACTGAAGGGGAAGATGGAGCTCAGGTTCTTGATGAGTtgaccttgagatggggagatggcCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGTCCTCAtgacaggaggaggaagaggggagtgGGGATTACAGCAGCATCAT----GGGAGACTCCATCAGCCACTGTgggctttgaaggtggaggaaggtcACGAGTCACAAAGGCAGGAGGCCTATAGGGGCTGGAGAAGTCAAGGGAACTGATTCTCCCCTGAGTCTCCAGAGGGAACACAGCCCTGTAGAtgccttgattttagctcagGAAGAACTGGATCCAATTTCTGTTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449752 587 + 50890351 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGAGGGTGTCCACAAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtgatgggaagaataactgtccccaat-atggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaaganggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaaacgagaagaggaggaggaggagagtggggattagagcagcgttgt----gggagagtccatcagccactgtgggctttgaaggtggaggaaggccacgagccacaatggcaggtggcctctacgggctggagaagtcaagagaaccg---ctctgttgagtctccagagggaacacagttctgtagatgacttgattttagcccaggaagaactggatccaatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccatg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e macFas5.chr19 55644263 5946 + 59248254 I a score=80564.000000 s hg38.chr19_GL949748v2_alt 816585 64 + 1064304 cttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTT s panTro4.chr19 59705754 64 + 63644993 cttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649912 64 + 60714840 cttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524048 64 + 64156825 tttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagtt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47746787 64 + 51301725 tttGTGATGATTTtctacagcagcaacaggaaaccaacacaggaacCCAGGTCAAGGACaagtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47450339 63 + 50890351 tttgtgataattttctgccgcagcaacaggaaaccaacacaGGAAC-CAGGTCAAGGACAAGTt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I a score=2805.000000 s hg38.chr19_GL949748v2_alt 816649 14 + 1064304 AAGAaaagacacaa s panTro4.chr19 59705818 14 + 63644993 AAGAAAGGACACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649976 14 + 60714840 AAGAAACGACACAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746851 11 + 51301725 taaaaaccaaa--- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47450402 11 + 50890351 aagaaaccaaa--- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60524112 0 + 64156825 C a score=16387.000000 s hg38.chr19_GL949748v2_alt 816663 43 + 1064304 ggatagccaggcatggtggcaggtgcatgtaatcctagcgact s panTro4.chr19 59705832 43 + 63644993 GGAtagccgggcatggtggcaggtgcatgtaatcctagcgact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649990 43 + 60714840 GGAtagctgggcatggtggcaggcccatgtaatgctagtgact i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47450413 42 + 50890351 cgatagccgggcatggtggtgggcgtgagtaaacc-aacgact i chlSab2.chr6 C 0 I 6 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746862 3 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60524112 0 + 64156825 C a score=5097.000000 s hg38.chr19_GL949748v2_alt 816706 20 + 1064304 cgggaggctgagagcaggag s panTro4.chr19 59705875 20 + 63644993 tgggaggctgagggcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650033 20 + 60714840 cgggaggctgggggcaggag i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47450455 6 + 50890351 I e papAnu2.chr19 47746862 3 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60524112 0 + 64156825 C a score=47362.000000 s hg38.chr19_GL949748v2_alt 816726 109 + 1064304 aatcgcttgaacccaggagacagaggttgcagtgagcgtagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaaaaTTAATTAATTAATTA-------- s panTro4.chr19 59705895 105 + 63644993 aatcacttgaacccaggagacagaggttgcagtgagcctagaccataccacttcactccagcctgggcgaaggtgtgagactctgtctccaa----aaTTAATTAATTA-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650053 109 + 60714840 aatcacttgaacccaggagacagaggttgcagggagcctagaccacaccacttcactccagcctgggcaaaggagtgagactctgtctccaaaaTTAATTAATTAATTA-------- i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47450461 117 + 50890351 aatcgcttgaatccgggaggcagaagttgcagtgagccaagaccacaccactatactcctgcctgggtgaaaaagtgacactctgtctcaaaaatcaattaattaatcaattaatta i chlSab2.chr6 I 6 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746862 3 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60524112 0 + 64156825 C a score=14106.000000 s hg38.chr19_GL949748v2_alt 816835 17 + 1064304 AAGAAACCAAACAAAGA s panTro4.chr19 59706000 17 + 63644993 AAGAAACCAAACAAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650162 17 + 60714840 Aagaaaccaaacaagta i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524112 17 + 64156825 aagaaaccaaacaagga i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47450578 17 + 50890351 aAGAAATCAAACAAGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746862 3 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=82577.000000 s hg38.chr19_GL949748v2_alt 816852 77 + 1064304 GAAGGTTGGCTACACCGAGATCAGCAAGGGTGGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTT s panTro4.chr19 59706017 77 + 63644993 GAAGGTTGGCTACCCTGAGATCACCAAGGGTGGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650179 77 + 60714840 gaaggttggttaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524129 77 + 64156825 gaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggtt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47746865 77 + 51301725 gagGGTTGGCTACCCCGAGATCAGCAACGGTGCACTGCTGATGCCACCACCAGGCTGGAGCCACATAGGGAGGGAAT i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47450595 77 + 50890351 GAAGGTTGGCAACTCCGAGATCAGGAAGGGCGGGACGCTGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I a score=262510.000000 s hg38.chr19_GL949748v2_alt 816929 373 + 1064304 GATACTCCTCAAATCAGCACGAGGAGCCAGCCTATGGAAACTGGCACCATGGAGAAGGCACAGACATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGTCCAAAAGAGATTGAACCAAGCTGCTAAGAGCCGGGACGTGCAGCCTATCCTGCTTCCTCTTCCACTCCCACATAGACAGTAAGAAAGACATTAGTGTGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCACA-GCTACTagagacagagggacagagaagagggagggagacagaTGGAAGGACCT s panTro4.chr19 59706094 359 + 63644993 GATACTCCTCAAACTAGCACCAGGAGCCAGCCTATGGAAGCTGGCAC--------------AGGCATGGCAACAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGTCCAAAGGAGATTGAACCAGGCTGCAAAGAACCTCGACGTGCAGACTATCCTGGTTCTTCTTCCACCCCCACATGGA-AGCAGGAAAGACATTAGTGTGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGGCCAGTGGGAAGGGAATCAGAGGCTACTAGAGACAGAGGGACAGAGAAGAGCAGGGGAGACACATGGAAGGAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650256 373 + 60714840 gaaactcctcaaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGCTGTGTGGACACTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACACAGACAGCAGGAAAGACATTAGTGTGAAATACATACAACAGCCCAAGAGATCAGGCTGAGCCCAGCAGGAAGGGAATCAGAGGCTACTAGAGACAG-GGGACAGAGAAGACGGAGGGAGACAGATGGAAGGACCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524206 366 + 64156825 gattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGAACAG-------GGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAG-GGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCT i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47450672 373 + 50890351 GATGCTCCTAGAACCAGCACCAGGAGCCACCCTATGGAAGCTGAGGCCATGGAGAAGGCACAGGCATGGCAGGAGTGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATATGCAGCCTGCC-TGGATCCTCTTCCACCCCCACATAGATAGCGGGAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTGAACCCAGTGGGAAAGGCGTCTGAGGATACTAGAGACAGACGGACAGAGAAGAGGGAGGGACACAGATGGAGGGACCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387851 458 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I a score=403252.000000 s hg38.chr19_GL949748v2_alt 817302 477 + 1064304 GCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGCAGAGAGACAGACACCAG------CGAAGGGAAGGCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGACACCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCTTCCTGGCCCTCCCAGGTCACCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCGGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAAGTTTAACAACACTTTGCACCTCATTGGAGAGCACCATGATGGGGTTT------CCAAGGCCAACTTCTCCATTGGTCCCATGATGCCTGTCCTTGCAGGAACCTACAGATGCTACGGTTCTGTTCCTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATGGTGATCATAGGTGAGAGTGTCCAGA-CATTCTTCTC s panTro4.chr19 59706453 477 + 63644993 GCACCAGGAGTTGTGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGACACCAG------TGAGGGGAAGCCTCACTCATTCCAGGTGCCATGCATGGGATGATAAAGAGACACACCTTCTAAACTCACAAACTCTCTTCCTAGGAGTCCACAGGAAACCTTCCCTCCTGGCCCACCCTGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCGGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAAGTTTAACGACACTTTGCGCCTCACTGGAGAGCTCCATGATGGGGTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGACGGAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTCTTACTCACTCCCCCTATCAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCGGA-CATTCTTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650629 477 + 60714840 GCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGACACCAG------TGAGGGGAAGCCTCACTCATTCTAGGTGCAATGGATGGGATGATAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCCTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCAAGTTTGAGCACTTCCTTCTGCACAGAGAGGAGAAGGTTGAGGACACTTTGCGCCTCACTGGAGAGCTCCATGATGGGTTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGACGCCTGCCCTTGCAGGGACCTACAGATGCTATGGTTCTGTTACGCATTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTAATAATGTCCGGA-CATTCTTCTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524572 476 + 64156825 GCACCAGGG-TTATGGGCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATAGACACCAT------GGAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTACAGAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCACTGGACAGCTCCATGATGGGGGTT------CCCAGGCCAACTCTTCCGTGGGTCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGA-CCTGCCTCTC i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47451045 466 + 50890351 GCACCAGGG-----------GATAAAAGACAGGGAGACACAGAGAGGAAGGAGAGAGACAGACAGCCG------GGAGGGGAACCCTCACTCGTTCCAGGTGCCATGGATATGATGACAAAGGGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACAGTCATCCTACAATGTTCGTCAGATACCGTGTTTGGGCACTTCTTTCTGCAAAGTGAGGTGACCTTTGAGGAGCCCTTGCACCTTGTTGGAGAGCTCCGTGGTGGGGGTT------CCCAGGCCAACTATTCCATCCGTCCCACGATGTCTGCCCTTCCAGGGACCTACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCATGATCACAGGTGAGAGTGTCCGGA-CATTCTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3387393 479 - 49145316 GCACAGGGAGCCATG-----CAGAGAGAACAC--ACACACAGACAGGAAGGTCGTGGACGGGCTTTGGTGGTGATGAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCGTTCACAAAACCCTCCATCTCAGCACACCCAAGCTCCCTGGTGGCCGCGGGAGTTAGGGTGACCGTGTGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGAACTTGACACGAGGTTGGAGGCTGGGACTTACTACGTCAAGGCTGTCTTTCGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGACCATCCTGCTC i calJac3.chr22 T 458 I 622 e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I a score=405554.000000 s hg38.chr19_GL949748v2_alt 817779 561 + 1064304 ATTGTCATTGGGATGCAGAGTGAATGATCCAGGAC-TTGGAGACCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTGCCAACAGAGACAGAGAAACAAGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAAACACAGGGGCCATACAGGGAGTTA-GAAAAGACAGAAAGAGTTAAAGGAG--------ACAGACAGAC--ATGTCCCAGACAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCATGCTTATTCTGACACCTCTGACTTCCATGCAATGGAGA-ATAATCGTCCCAAAATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGG-TCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATCACA------- s panTro4.chr19 59706930 556 + 63644993 ATTGTCATTGGGACACGGAGTGAATGATCCAGGAC-TTGGAGGCCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCATACCGAGAGTTA-GAAAAGACAGAAAGAGTTAAAGGAGAC------ACAGACAGAC--ATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCGTGTGGCACCTAAAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCGTCGCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACATGCGG-TCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCC-------CACA------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651106 557 + 60714840 ATTGTCATTGGGACGCAGAGTGAATGATCCAGGAC-TTGGAGGCCCAGGTCATTGTAAGGAAGATGAGCTTGGTATTCTTAAGGAGCGAAACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCATACAGGAAGTTA-GAAATGACAGAAAGAGTTAAAGGAG--------ACAGACAGACAGATGTCCCAGAGAGAGATATCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAAAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCATCTACAGATGCCATGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCATCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCC-------CACA------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525048 582 + 64156825 ACCCTTGCAGGGACAGGGAGTGAATGATCTAGCAC-CGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCGCACATCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGAAAAGAGATAAAGAGGTAAAGAAGACACACAGAGAGACAGAC--ATGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGACCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAG-TCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACAC-------CACATGTTATA i rheMac3.chr19 C 0 I 20 s chlSab2.chr6 47451511 562 + 50890351 ATTGTCACTGGGACACAGAGTGAATGATCCAGAACTTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGACAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCAGACAGGGAGGTA-GAAAAGAGAGAAAGAGTTAAAGGGGACACTCAGACAGACAGAC--ATATCCCAGAGAGAGGCGTCCTTCCATGCTGACCTTGCTCAGAGACTTGGCACAGGTTAGAAATTTCATTTCTGTTTTACCTCCACAAAGTGTT-TCTACCAAGAGAACCCAAGGACGCACATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGTACCTACAGATGCCGTGTTTGTTCTGACACCTCTGCCTTCCGTGCAGTGGAGA-GTCATCGTCCCAGGATATCGTGGCTC------------CAGAACACCAACCCCTGTATGCTGCGTGTACTTGGGG-TCCCCAGATTGGATTCTGAGGTTCATATTCCACATAACCC-------CACA------- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I a score=4811.000000 s hg38.chr19_GL949748v2_alt 818340 10 + 1064304 TATGAGAGGA s panTro4.chr19 59707486 10 + 63644993 TATGATAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651663 10 + 60714840 TATGAGAGGA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47452073 10 + 50890351 TATGATAGGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60525630 20 + 64156825 I a score=195080.000000 s hg38.chr19_GL949748v2_alt 818350 266 + 1064304 TCACTGAGAAGCACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAA--ACACACAGAGAAAGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAG--AGAG-AGAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGAGAGCAGAGA-AAACCACTAAAATTAGAGTCCTGAGGGCGAGGCACAAGGGCATAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCC-AAAGAGAACTAGAGAGACCGAGAGGCAGAG s panTro4.chr19 59707496 268 + 63644993 TCACTGAGAGACACAGAGAAaagtcaggaacaccaaaaagcaaagacataa--acacacagagaatgagccacaggaaggagactgagagactcacagacacataaag-gagag-aaaagagggcagagaagtggagagaatgatggaagggagcagagacaaagcactaaaattagagtcctgagggagaggcacaaggacatagaaagatggagatgtggggatgaattgcagagattcc-aaagagaactagagagaccgagaggcagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651673 268 + 60714840 TCACTGAGAGACACAGAGAGAAATCAGGGACGCCAAAAAGCAAAGACATAA--ACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAAAGAGAGAG-AAAAGAGGGCAGAGAAGTGGCGAGAATGATGGAAGGGAGTAGAGA-AAAGCACGAAAATTAGAGTCCTGAAGGAGAGGCACAAGGACTTAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCC-AAAGAGAACTAGAGAGACCGAGAGGCAGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525650 271 + 64156825 CCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGA-AATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACGAAAACAGGGAAAGATAAAGATGTGGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAG i rheMac3.chr19 I 20 I 409 s chlSab2.chr6 47452083 268 + 50890351 TTCCTGAGAGACACAGAGAGAAATCAGGAACATCAAAAAGCAAAGACATAA--ACACAAAGAGAATGAGCCAGAGGAAGGGGACTGAGAGACTCACAGACACATAAAGAGAGAG-GAAAGTGGGCAGAGGAGTGGAGAGAATGATGGAAGGGAGCAGAGA-AAAGCTCCAAAATCAGAACCCTGAGGGAGGGGCACAAAGACAGAGATAGATAAAGATGTGGGGATGGATTGCAGAGATTCC-AAATAGAACTAGAAAAACTGAGAGGCAGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I a score=3342.000000 s hg38.chr19_GL949748v2_alt 818616 7 + 1064304 CAagaca s panTro4.chr19 59707764 7 + 63644993 caagaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651941 7 + 60714840 CAagaca i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47452351 7 + 50890351 AAAGACA i chlSab2.chr6 C 0 I 21 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60525921 409 + 64156825 I a score=325.000000 s hg38.chr19_GL949748v2_alt 818623 21 + 1064304 gatgatagatggatagataca s panTro4.chr19 59707771 7 + 63644993 gatgata-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651948 7 + 60714840 gatgata-------------- i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47452358 21 + 50890351 I e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60525921 409 + 64156825 I a score=78193.000000 s hg38.chr19_GL949748v2_alt 818644 238 + 1064304 gatagat-gatggatagatatagatagatgatatataggtagatgatagata----ataggttatagatacatagatgatgattgattgattcatt----aatagatgatacatagagatgatgatgatgaagatagatggatagataatacatagagatagagaggaagacaaagagagaaataatagagagagagaga----tgatacatatatatagataatagatgattgacg------------gatagacaattgat s panTro4.chr19 59707778 227 + 63644993 --------gatggatagatatagatagatgataaataggtagatgatggata----attggttatagatacatagatgatgattgatttattcatt----aatagatgatacatagacatgatgatgatgaa--------gatagataatacaaagagatagagaggcagacaaagagagaaatcatagagagagagagagagatgacacatagatatagataatagattattgata------------gatagacaattgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651955 233 + 60714840 --------gatggatagatatagatagatgataaataggtagatgatagata----ataggttataggtacatagatGATGATTGATTGACTCATTGATCAATAGATGATACATAGAGATGATGAGGATGAagata----gatagataatacatagagatagagaggcagacaaagagagaaatcatagagagagaga------tgatacatagatatagataatagatgattgatggat--------agatagacaattgat i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47452379 213 + 50890351 gatagatgaatggatagatgtagatagatgataaataggtaggtgatagataatggatgggttatagatacatagatgatgattgat-------------a------gatatatagata---------------------cgtagatgatacatagagacagagaggcagacagatagagagggaacagacaga----------tgatacacagatatagataatagatagatggtggatagatagagagacagaaaattgat i chlSab2.chr6 I 21 I 4 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60525921 409 + 64156825 I a score=193224.000000 s hg38.chr19_GL949748v2_alt 818882 280 + 1064304 agataaatagatgatatatagatatagatgacaggtagagaatttgta----gataggcaccgaatagataaatagatggattgatagataatagatagaAATATGCAGAAAGTTATGAACGGGACACAAACTGAGAAACTCAGAGTT--AAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGCCAGAGAGAATAAAACAATCCAAAAACGGAAAACATAACTAGAGGTAGGGAAGTGAGGTCAGAGACCTACagagacagagaaggtggaaggaggaaata s panTro4.chr19 59708005 280 + 63644993 agacaaatggatgatagaTAGATATAGATGGCAGGTAGAGAATTTGTA----GTTAGATACTGAatagataaatagatagatcaatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGATTT--AAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAGCAATCCAAAAAGGGAAAACATATCTAGAGGTGGGGAAGTGAGGTCAGACACCTagagagacagagaaggtggaaggaggaaata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652188 278 + 60714840 agataaatagatgatatatagataTAGAGGACAGGTAGAGAATTTGta----gatagacactgaatagataaatagatagatcggtagata----atagaAATATGCAGAAAGTTATGAAGAGGACACAAAGTGAGAAACTCAGAATTTAAAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATATCTAGAGGTGGGGAAGTGAGGTCAGAGACCTagagagacagagaaggtggaaggaggaaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526330 277 + 64156825 agatagatagatgatacataaatatagatgatagatagataatttgta----gatagacaccaaatagataaata----gatcgatagataatagacagaAATATGCAGAAAGTTGTGAACAGGACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAACCCAAGGAGGGTCAGAAAGAATAAAACCATGCAAAAAGGGGAAACATTCCTCGGGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGACAAGGCAGAAGGAGAAAATA i rheMac3.chr19 I 409 C 0 s chlSab2.chr6 47452596 281 + 50890351 agatagatacatgcaacatagataCAGATTACagatagataattgatagattgataggtagtagatagatagatc----gatcgatagataatagatagaAATGTGCAGAAGGTTATGAAGAAGACAGAAAGTTAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAATCCAAGGAGGATCAGAGAGAAGAAAACAATACAAAAAGCGAAAACACACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTagagagacagagaaagtggaaggaggaaaca i chlSab2.chr6 I 4 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55644263 5946 + 59248254 I a score=104962.000000 s hg38.chr19_GL949748v2_alt 819162 102 + 1064304 gacatgaagagagataggg-tggagggtgagacagagaaagagaGCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGGTCAGGTGTGAGGGGAGCTGTGAC s panTro4.chr19 59708285 101 + 63644993 gacatgaagagagat-ggg-tgaagggtgagagagagcgagagagCACTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGGGAGGGGAGATGTGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652466 102 + 60714840 gacatgaagagagatgggg-tggagggtgagagatagagagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGAC i ponAbe2.chr19 C 0 I 20165 s rheMac3.chr19 60526607 95 + 64156825 GACATGAAGAGAGAAGGGGCTGGAGGGTGAG--------AGAGAGCATTAGGCCATAGAGCGGGGGAGTGAGTTCTCAGCTCAGATGTGAGGGGAGCTGTGAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47746942 93 + 51301725 GACAGG--GAGAGTcgggggtggagggtgag--------agagagcattaggTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGAAGCTGTGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452877 93 + 50890351 gacatgaagagagaTGGGG-TGGAGGGTGAC--------AGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAAGGGA-CTGTGAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I a score=26450.000000 s hg38.chr19_GL949748v2_alt 819264 20 + 1064304 AAGGAAGATCCCCCCTGAGG s panTro4.chr19 59708386 20 + 63644993 AAGGAAGAACCTCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56672733 20 + 60714840 AAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 I 20165 C 0 s rheMac3.chr19 60526702 20 + 64156825 AAGGAAGAACCTCCCTGAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47747035 20 + 51301725 AAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452970 20 + 50890351 AAGGAAGAACCTCCCTGAAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3387872 622 - 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I a score=509914.000000 s hg38.chr19_GL949748v2_alt 819284 339 + 1064304 AAACTGCCCCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCT----------------------CCATCTATCCAGGGAAGGGGAGGCCCATGAACGTAGGCTCCCTGCAGTGCGCAGCATCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACGCTCCCTACGAGTGGTCAAACTCGAGTGATCCACTGCTTGTTTCCGTCACAGGTGAGGAAACCCCATATCTGTCCCATGTCCTATG---------ATCCTAGAGCC s panTro4.chr19 59708406 361 + 63644993 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTTGGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCAGAGCTCCTATGACATGTACCATCTATCCAGGGAGGAGGGGGGCCGTGAACGTAGGCTCCCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTTCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAGATCCGAGTGACCCACTGCTTGTTTCCGTCACAGGTGAGGAAAGCCCATGCCTGTCCCATGTCCTATG---------ATCCTAGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56672753 361 + 60714840 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTTGCGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCTGGAGCTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATCAACTTAGGCTCCCTGCAGTGCCGAGCATCAATGGAACATTCCAGGCCGACTTCCCTCTGGGCCCTGCTA------CCCACAGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGGATCTCCCTAAGAGTGGTCAGACCCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGTCTGTCCCATGTCTTCTG---------ATCCTAAAGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526722 361 + 64156825 AAACTGCCTCTTCTCCTTCCAGGTGTATATGAGAACCCTTCTCTCTCAGCCCAGCCGGGCCCCACAGTGCAGGCAGGACAGAACGTGACCTTGTCCTGCACCTCCCAGACCTCGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCAATGAACTTAGGCTCCCTGCAGTGTCAAGTGTCAATGGAACTTTCCAGGCCAACTTCCTTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTACCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGTCCGTTTCCGTTACAGGTGAGGAAAGCCCATGTCTGTCCCATGTCTTATG---------ACCCTAGAGcc i rheMac3.chr19 C 0 I 162 s papAnu2.chr19 47747055 361 + 51301725 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCCCACAGGAGAGAACATGACCTTGTCCTGCAGTTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGCAGTGCCAAGCGTCAATGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCATGGAGGGAACTACAGATGCTTCGGCTCTCTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCTGTTTCtgtcacaggtgaggaaaccccATGCCTGTCCCATGTCTTATG---------ATCCCAGAGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452990 361 + 50890351 AAACTGCCTCTTCTCCTTCCAGGTCTATATGACAAACCTTCTCTCTCAGCCCAGCCAGGCCCCACAGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGACCTTGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGACCTTAGGCTCCCTGCAGTGCCAAACATCAATGGAACATTCCAGGCCGACTTCTCTCTGGGCCCTGCCA------CCAACGGAGGAACCTACAGATGCTTTGGTTCTTTCCATATCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACGCCATGCCTGTCCCATGTCTTATG---------ATCCCAGAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3388494 374 - 49145316 AATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGTTGGGATGGAACGTGACATTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGGCAGGGACACAGGGGAGCGTTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAGG--CCAAGCCTGCTGCATGCTCTGGGGCCCACTGCATCCTGGAGCT i calJac3.chr22 I 622 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I a score=111267.000000 s hg38.chr19_GL949748v2_alt 819623 145 + 1064304 TTAGCTGAGGAGCTTCCTGCTGATGAT--GGAGA----------------------GAAGCATGGACAGATGCAGAGAGAAGACGCAGCATGCCTGTGAGGGAGG-------GATCAGGGCG-CAGGATGGCACACACAGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCC s panTro4.chr19 59708767 145 + 63644993 TTAGCTGAGGAGCTTCCTGCTGATGAT--GGAGA----------------------GAAGCATGGACAGATGCAGAGAGAAGATGCAGCCTCGGTGTGAGGGAGG-------GATCAGGGCG-CAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACACGGCCTGCATGGAGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673114 144 + 60714840 ATAGCTGAGGAGCTTCCTGCTGATGAT--GGAAA----------------------GAAGGATGAACAGATGCAGAGAGAAGACGAAGCCTGGGTGTGAGGGCGG-------GATCAGGGTG-CACGATGGCAGACA-AGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCC i ponAbe2.chr19 C 0 I 17805 s papAnu2.chr19 47747416 144 + 51301725 ATAGCTGGGGAGCTTCCTGCTGATGAT--GGAGA----------------------GAGGGATGGACAGATGCAGAGAGAAGGCGAAGCCTCGGTGTGAGGTTGG-------GGTCAGGGCA-CAGGAGGGCAGACACAGCACAT-CAAACCCTCCCGCACTGCCTGCATGGAGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453351 144 + 50890351 ATAG-TGAGGAACTTGCTGCTGATGAT--GGAGA----------------------GAAGCATGGACAGGTTCAGAGAGAAGACCAAGCCTCAGTGTGAGGGCAG-------GATCAGGACG-CAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGTGTGGTGGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3388868 170 - 49145316 AAATGTGAGGGGCATCCTACCAGAGATCAGGAGATCTTAGGGGTTCTGGTCAAAAGGAAGCCATGAGAAATACAGAGGAAAAGAGAGGC-------TGAGAATGGCCAGTGCTGTCAGGGTGATAGGACAGGAATCAGGGCACTTCCACACCCTTGTCCACGTCCTATATGGAGACC i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=130421.000000 s hg38.chr19_GL949748v2_alt 819768 129 + 1064304 TCCGATTAGGGCTCCAGAAACCCAGGCAGATGTAGAAAGCGGTCAGGAGAGACCCAGAGAAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG s panTro4.chr19 59708912 129 + 63644993 CGCGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCAGTCAGGAGAGACCCAGAGAAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACATTACCCATTTCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56691063 129 + 60714840 CATGGTCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCAGTCAGGACAGACCCAGAGGAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG i ponAbe2.chr19 I 17805 T 17498 s papAnu2.chr19 47747560 128 + 51301725 TGCGGTCAGGGCTCCAGGCACCCaggcagatggagaaactggTCAGGACAGACCCAGAGG-GGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453495 128 + 50890351 CGCGGTCAGGGCTCCAGGCCCCCAGGCAGATGGAGAAACTGGTCAGGACAGACCCAGAGG-AGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3389038 128 - 49145316 CACTTTGGGGGC-CTATGAATCCAGGTGAATGAAGAACTGGGTGAGTCAAACACTGGAGGAGGGGAGACCAGATAAAGATTGGGAAGATCAGGGGTTGCATCAGCCCCTCACCCTTATCCATTTTCCAG i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=38919.000000 s hg38.chr19_GL949748v2_alt 819897 36 + 1064304 AAGCCCTTCCTGGCCTCTCACCCACACAGAGATGTC s panTro4.chr19 59709041 36 + 63644993 AAGCCCATCCTGGCCTCTCACCTACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673694 36 + 60714840 AAGCCCATCCTGGCCTCTCACCCACAGAGAGATGTC i ponAbe2.chr19 T 17498 C 0 s papAnu2.chr19 47747688 36 + 51301725 AAACCCATCCTGGCCTCTCACCCACACAGAGATAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453623 36 + 50890351 AAGCCCATCCTGGCCTCTCACCCACACAGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3389166 36 - 49145316 GAGCTCCTCCTGACCTCTCAGACACAGAGAGATTTC i calJac3.chr22 C 0 T 1795 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=54390.000000 s hg38.chr19_GL949748v2_alt 819933 70 + 1064304 ATCACCAGCAACCCCTACATCCTTTTCTTTTTGTTTGAAAAAATATTCATTGAGGTTAAATATACCTATA s panTro4.chr19 59709077 70 + 63644993 ATCACCAGCAACCCCTACACCCTTTTCTTTTTGTTTGAAAAAATATTTATTGAGGTTAAATATACCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673730 70 + 60714840 ATCACCAGCAACCCCTACACCCTTTTCTTTTCCTTCGAAAAAATGCTGATTGAGGTTAAATGTACCTATA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747724 70 + 51301725 ATCACTAGCAACCCTTACACCCTTTTCTTTTCAATTGAAAAAATGCTGATTGAGGTTAAGTATACCTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453659 70 + 50890351 ATCACCAGCAACCCTTGCACCTTTTTCTTTTCATTTGAAAAAATATTTGttgaggttaaatatacctata i chlSab2.chr6 C 0 T 58301 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=15823.000000 s hg38.chr19_GL949748v2_alt 820003 23 + 1064304 TAGCTTACCACTTTTAACAtttt s panTro4.chr19 59709147 23 + 63644993 TAGCTTACCACCTTTAACAtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673800 23 + 60714840 TAATTTACCAACTTTACCATTTT i ponAbe2.chr19 C 0 I 17498 s papAnu2.chr19 47747794 23 + 51301725 TAATTTACCAAcgttaccatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395428 23 + 50890351 tagtttaccacttttaacatttt i chlSab2.chr6 T 58301 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=910.000000 s hg38.chr19_GL949748v2_alt 820026 1 + 1064304 t s panTro4.chr19 59709170 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56691321 1 + 60714840 T i ponAbe2.chr19 I 17498 T 75811 s papAnu2.chr19 47747817 1 + 51301725 t i papAnu2.chr19 C 0 T 31551 s chlSab2.chr6 47395451 1 + 50890351 t i chlSab2.chr6 C 0 I 4 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=253337.000000 s hg38.chr19_GL949748v2_alt 820027 331 + 1064304 tttttttt--gaggtggagtcta--gctctgtctcctatgctggaatgcagtggcacaatctcagctcactgtaacctccgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtactacaggcgcccatcaccacgccgggctactttttgtatttttagtagagagggggtttcaccatgttggtcgagctgctctggaactcctgaccacgtgatccacccgcctcaggctcccaaagtgctgggattacaggcatgagccaccgcgcccggccACGTTTACCAATTTTAAGTGTAAGGTCTAGTGGTCATAAATAC s panTro4.chr19 59709171 332 + 63644993 ttttttttttgaggcagagtcta--gctctttcccctatgctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagccgcctgagtaactggtactacaggcatgcatcaccatgccaggctaccttttgtatttttag-agagagggggttttaccatgttggttgagatggtcgctaattcctgaccacgtgatccacgcgcctcagcctcccaaagtgctgggattacaggcatgagccaccacacccggccACGTTTACCATTTTTAAGTGTAAGGTCTAGTGGTCATAAATAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615511 329 + 60714840 tttttttt----ggcggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaaacgattctcctacctcagccgcctgagtagctggtactataggcacgcaccaccacgccaggctactttttgtattttgagtagagagggggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgatccaccgcgcccggccacttttaccatttttaagtgtaaattctagtggTCataaatac i ponAbe2.chr19 T 75811 C 0 s papAnu2.chr19 47716267 326 + 51301725 -----ttt--gaggcgaagtcta--gctctgtcccctatgctggagtacagtggcacaacctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataaatac i papAnu2.chr19 T 31551 C 0 s chlSab2.chr6 47395456 333 + 50890351 tttttttt--gaggcggagtctcttgctctgtcccctatgctggagtacagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataaatac i chlSab2.chr6 I 4 I 82 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=1610.000000 s hg38.chr19_GL949748v2_alt 820358 12 + 1064304 ATACATATA-AAT s panTro4.chr19 59709503 13 + 63644993 ATACATATATAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615840 12 + 60714840 atttatata-tat i ponAbe2.chr19 C 0 I 18 s papAnu2.chr19 47716593 9 + 51301725 atttatata---- i papAnu2.chr19 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47395789 82 + 50890351 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=1086.000000 s hg38.chr19_GL949748v2_alt 820370 10 + 1064304 TTTTTGTTTG s panTro4.chr19 59709516 10 + 63644993 TGTTTCTTTG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47716602 10 + 51301725 tttatgtgtg i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56615852 18 + 60714840 I e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47395789 82 + 50890351 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=-2112.000000 s hg38.chr19_GL949748v2_alt 820380 12 + 1064304 ----------------------------------------------------------------------------TTTGTTTTATcc s panTro4.chr19 59709526 12 + 63644993 ----------------------------------------------------------------------------TTTGTTTTATcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615870 12 + 60714840 ----------------------------------------------------------------------------TTTTTTTTAccc i ponAbe2.chr19 I 18 C 0 s papAnu2.chr19 47716612 88 + 51301725 tgtgtgtgtatacatatatgtgtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatatatatttttttaaccc i papAnu2.chr19 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47395789 82 + 50890351 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=564568.000000 s hg38.chr19_GL949748v2_alt 820392 717 + 1064304 tccacccttttcttcctggcctctggtagccaccattctactctctatcttcatgagatccaccttttagctcctgtatatgggtgagaaatgagaatatttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccgctgtgcgtatgtactacattctctctatccattcatccactgatgggca-ggtaggttgactccacatcttggctactgtgaagagtgctgcaccaatcatacgagtgcagatatcacttcgatacattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgcacgccaccatgccgggatactttttggttttttttagtgtacatggggtttccccaggttggctaggctgctctcaaactcatgacctcaactgaggtgcccgcctcggtctcccaaagtgccgggattacaggcatgatccacttcatccaacctctttttagttctttaaaggacttccatacttt s panTro4.chr19 59709538 716 + 63644993 tccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgagaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgtgaatgtactacattctctctatccattcatccactgacgggca-ggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcagacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagttttttgtttgttg-ttttgtttttgtttttgtgacagtttccctctgttcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccacctcctgggttcaaatgattttcctgcctcagcctccctactagctgggattacaggtgcacgccaccatgcctggctaccttttgg-tttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgccccggtctcacaaagtgctgggattacaggcatgatccacctcacccaacctctttttagttctttaaaggacttccacacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615882 703 + 60714840 cccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctattcgttcatccactgatgggcagggtaggttgactccacatctcggctactgtgaacagtgctgcaccgatcatacgagtgcagatatcacttcgatata-tgatttcctttcc-ttggatataaacccagtagtgaaattgctggatactatgaa------------agtttttcgtttgttgtttttgttttagtttttgagacactttctctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccctagtagcagggattacaggtgcacgcccccatgcctggctactttttct-tttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47716700 715 + 51301725 tcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAATCTTTGTAATGagctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCA-GGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaagttctctttttagtttttcatttgttgtttttgttttggtttttgagacagtttccctctgtgcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgt-actttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395871 709 + 50890351 tcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaatgtttgtaatgagctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggca-ggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgccttggtttttgagaccgtttccctctgtgcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgt-actttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 I 82 I 42340 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=165107.000000 s hg38.chr19_GL949748v2_alt 821109 339 + 1064304 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctaccaccttgccagcatttgttttgcctgtcttgcagctaaaagccattttat--------------------------------tttatttcattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggtgcgatctcggctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctccc--gagta-gctggaattacaggcacacgccaccacgcccgactaatt---tttgtatttttagtagagacagcgtttctccatgtgggtcagactggtctcaaa s panTro4.chr19 59710254 370 + 63644993 tctccataatggctgtactaatttacactcctaccaacaggctaccagggttctcctttctcta-caccttgccagcatttgttttgcctgtcttgcagctaaaagccattttatattattttattttattttattttatttttgttttcattttattttattttgagatggattttcactcttttcacccaggctggagtgcagtggcacgatctcggctcaccacaacctccacctcccaggttcaagcaattctcccgcctcagcctacc--aagta-gctgggattacaggcatgtgccaccatgcccggctactt---tttgtatttttagtagagacagagtttctccatgtgggtcaggctggtctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56616585 370 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcattactttggcctgtcttgcagctaaaagccattttattttattttattttattttattttat-------tttattttattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcacgatctcagctcaccgcaacctccacctcccaggttccagtgattctcctgcctcagcctccctgaaataggctgggattacaggcacatgcaaccacgcccggcctatttaattggtatttttggtagagacagtgtttctccatgtgggtcaggctggtctcaaa i ponAbe2.chr19 C 0 I 21266 s papAnu2.chr19 47717415 363 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagccattttattttattttattttattttattttat-------tttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctccc--aaata-gctggaattacaggaatgtgccaccacgcccagcttatt---tttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaa i papAnu2.chr19 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=36363.000000 s hg38.chr19_GL949748v2_alt 821448 77 + 1064304 ctcccgaccttatgagattcgcccacctcgggctctcagagttctaggatgacagacgtgagccacctcgcccggcc s panTro4.chr19 59710624 77 + 63644993 ctcccgacctcaggagattcgcccacctcgggctctcaaagttctaggatgacagatgtaagccaccatgcccgacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638221 77 + 60714840 ctcccgacctcaggagattcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcc i ponAbe2.chr19 I 21266 C 0 s papAnu2.chr19 47717778 77 + 51301725 ctcccgacctcaggtgattcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcc i papAnu2.chr19 C 0 I 31735 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55644263 5946 + 59248254 I e rheMac3.chr19 60527083 162 + 64156825 I a score=45560.000000 s hg38.chr19_GL949748v2_alt 821525 102 + 1064304 taaaagccattttaatggggtgagatgaaaactcactttgattttaattcgcgtttctctgatgatgagtgatactgagcactttttcgta----------------------------tgtggggaaat s panTro4.chr19 59710701 102 + 63644993 taaaagccatgttaatggggtgagatgaaaactcacttcaattttaatttgcatttctctgatgatgagtgataacgagcactttttcata----------------------------tgcggggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638298 102 + 60714840 taaaagccattttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctgatgatgagtgatactgagcacttcttcata----------------------------tgcggggaaat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527245 130 + 64156825 taaaagccattttaatggggtgagatgaaaattcattgtgattttaatttgcatttctctgatgatgagtgaaactgaacactttttcacacacatgatggtcatttatatgttttgtttgtggagaaat i rheMac3.chr19 I 162 I 5 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47396580 42340 + 50890351 I e papAnu2.chr19 47717855 31735 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=59207.000000 s hg38.chr19_GL949748v2_alt 821627 78 + 1064304 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatacttctagttatta s panTro4.chr19 59710803 78 + 63644993 ttcatgtctttcgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagtcatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638400 78 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttatta i ponAbe2.chr19 C 0 T 20896 s rheMac3.chr19 60527380 76 + 64156825 ttcaagtcttttgctcattttttagttaaat--tttactttattgagttatgtgatcttcttatatttctagttatta i rheMac3.chr19 I 5 C 0 s chlSab2.chr6 47438920 78 + 50890351 ttcatgtcttttgctcattttttagttaaattctttgttttattgagttatgtgagcttcttatatttctagttataa i chlSab2.chr6 I 42340 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47717855 31735 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=194435.000000 s hg38.chr19_GL949748v2_alt 821705 269 + 1064304 atcccgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtt-tatttttagcggtgcagaagttgcttagtttgaggtaatcccaatggtcta-tttttgcttcgattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtactggagcatttccccaatattttcttctacgtgtttcacaggttcaggccttagactcacatcttgaatccactttcatttga s panTro4.chr19 59710881 269 + 63644993 atcccgtctcagaagcatagtttgcacatagttgctcccagtctgtgggttgtctcttcactttgttggtt-tatctttagcggcgcagaagttgctgagtttgatgtaatcccaatggtcta-tttttgcctcgattacttctgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcatggagcatttccccaatattttcttctacgtgtttcataggttctggacttagactcacatctttaatccattttcatttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617582 270 + 60714840 atcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgcgttgtttcttcacgttgttggtt-tatctttagtggcacagaagttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatctttaatccattttcatttga i ponAbe2.chr19 T 20896 C 0 s rheMac3.chr19 60527456 271 + 64156825 atcctgtctcagatgcatagtctgcaaatattggctcccattctgtgggttgtctcttcactttgttgtttgcttgttttgcagtacagaagctgcttagtttgatgtaatcccaatggtctgtttattgctttgattatttgtgtttttgaggtttcaaacaaaatgtctcttctcagacaaaggtcctgaagcacttcctcaatattttcttctacgtgtttcataggttcaggccttagactcatgtatttattccattttgatttgg i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47438998 271 + 50890351 atcccgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttatttgttttgcagtgcagaagctgcttagtttgatataatccctgtggtctgttttttgctttgattacttgtgtttttgaagtattaaacaaaatgtcttttctcagacaaatgtcctgaagcatttccctaatatttccttctacaaatttcataggttcaggacttagactcatgtatttaatccatttggatttga i chlSab2.chr6 C 0 I 14906 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47717855 31735 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=21607.000000 s hg38.chr19_GL949748v2_alt 821974 29 + 1064304 tttttgtgtatggtgacaggtagaggtgc s panTro4.chr19 59711150 29 + 63644993 tttttctgtatggtgacaggtagaggtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617852 29 + 60714840 tttttgtgtatggtgacaggtagaggtgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527727 29 + 64156825 tttttgtggatgatgagacgtagagctgc i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47454175 29 + 50890351 tttttgtgaatggtgagaggtagaggtgc i chlSab2.chr6 I 14906 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47717855 31735 + 51301725 I e macFas5.chr19 55644263 5946 + 59248254 I a score=322326.000000 s hg38.chr19_GL949748v2_alt 822003 298 + 1064304 agtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaaaactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggc----tgggcatggtggctaacaccagcaacttcagcactttgggaggccaaggctggtggatcacctgaggacaggagtacaagattactctggccgacgtgatgaaacctcgtctccactaaaaatataaaaattagctgagcatggtggtcagcacctgtaatactactactcaggagtttgaggca s panTro4.chr19 59711179 298 + 63644993 agtttcattcctctgcatgtagatgtccacatttccctgcactgtttattgaaaaggctgtcctttcctaattgtgagttcttgacacctctgtcaaagtccattggatgggc----tgggcatggtggctaacacctgcaattccagcactttaggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcatctccactaagtatataaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgagtca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617881 298 + 60714840 agtttcattcttctgcatgtagatgtccaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggc----tgggcatggtggctaacacctgcaattgcagcattttgggagaccgaggcaggtggatcacttgaggccaggagttcaagatcagcctggccaacatggtgaaacgttgtctctactaaaaatacaaaagttagctgagcatggtggtcagcacctgtaataccactactcaagggtttgaggtg i ponAbe2.chr19 C 0 I 74711 s rheMac3.chr19 60527756 302 + 64156825 agtttcattcctctgcatggagataaccagttttccccacattgtttattgaaaagactgtcctttcctgattgtagcctcctggcacctttgtcaaaatgcattggattggcagagcgggcatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtagatcacctgagacgaggagtttgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagcttagcattgtggtcagtgcctgtaataccactactcaagactctgaggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55650209 297 + 59248254 agtttcattcc-ctgcatgcagataacccgttttccccgcatcgattattgaaaagactgtcgtttcctgattgtcggttcttgacacttttgtcaaaatgcattggattggc----tgggaatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttccaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcagctcctgtcataccactactcaagagtctgaggca i macFas5.chr19 I 5946 C 0 s chlSab2.chr6 47454204 297 + 50890351 aatttcattcc-ctgcatgtaggtaaccagttttccccacatcgtttattgaaaagtctgtcctttcctgattgtacgttcttggcacctttgtcaaaatgcattggattggc----tgggcatggtggctcacacctgcaatcccagcacattcagaggccaaggtgggtagatcacctgagaccaggagttcgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcagctcctgtaatatcactactcaagagtctgaggca i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47717855 31735 + 51301725 I a score=106018.000000 s hg38.chr19_GL949748v2_alt 822301 112 + 1064304 agagaattgattgaacccaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactccatctcaaaagaaaaaata-------aaaaaa s panTro4.chr19 59711477 112 + 63644993 agagaattgattgaactcagcaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagaacgagattccatcctaaaagcaaaaaaa-------aaaaaa i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56692890 109 + 60714840 agagaattgcttgaatccaggaggtggaggttgcattgagctgagattgcacctctgcactccagcctgcatgacagagcaagattccatcacaaaaaaaaaaaaa-------GCC--- i ponAbe2.chr19 I 74711 T 17378 s rheMac3.chr19 60528058 103 + 64156825 aaagaattgcttgaacccagtagacagaggttgttg-gaaccgagactgcacctctgcaatccagcctgagtaacagagcaagattccatctcaaaaa---------------aaagaa i rheMac3.chr19 C 0 I 4 s macFas5.chr19 55650506 119 + 59248254 agagaattgcttgaattcaggagacagaggttactgtgagccgagattgcacctctgcaccccagcctggttaacagagcaagattccatctcaaaaaaaaaaaaaagaaaagaaaaaa i macFas5.chr19 C 0 I 4 s chlSab2.chr6 47454501 112 + 50890351 agagaattgcttgaattcaggaggcggaggttgcagtgagtcaagaatgcacctctgcactccagtctgggtgacagagcaagattccatctcaaaacaaaacaaa-------aaaaaa i chlSab2.chr6 C 0 I 6 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47717855 31735 + 51301725 I a score=1710041.000000 s hg38.chr19_GL949748v2_alt 822413 1158 + 1064304 attggatgtaaatgcatggattatatctgtgttcttcattctgctccgttgttctatgtgcctttcttcatgccaacatcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATACAAAAATTATGGAAGAAAGGATCCCTGGACTCCCAGGGCCCAATGTTAGATAACAGAGTGTTGGCCATGAACCAAACTCAAAGATTTCCACTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGGA-CCCTCTTATATCCGCTTTTGGAACCCTGGGGAGGTGGAAACCTTGGATTCAGGCGTTGACTCAGCATCTCACAGCTC--TGACATTGTACGCCTGTCTTCTACCATCTC--CGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGGAAAAACGCAATGTTTGTTCTGCTTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGCGAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAACAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGC---------TCATGCACGC-----ACACTTTGACTCACTGACTTATTCAGCCACGGCCCCATGCTCAGGTTGTGCAGTGTGGAAGCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttattt----aattatcttacagtgctctagct-ca-aagcatgaagtg---catctcactgggctaaaatcaagatgacagcaagcctgccttccctctgaggattccaggcaagaatctgct-t-ctcacttgtcccatcttataaaggctccca-gttccttggctgctggtccctttcctccttcctcaaaac s panTro4.chr19 59711591 1158 + 63644993 attggatgtaaattcatggattatatctgtgttcttcattctgctccattgttctatgtgcctttcttcatgccaacatcatgctgttttgcttactatgactctgtaatatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGAGCATCACATACAAAAATTATGGAAAAAAGAATCCCAAGACTCCCAGGGCCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCTTTGAGTAGAGGACAGGCAGCCTCATTTCCTGACCTCTCTACTGTCTCGTGTTCTAGAAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAacttggagaagtggaagccttggattcaggcattgactcagcatctcgcagatc--tgacattgtgcgcctgtcttccaccatctc--tgaactccagattctccaacagcaaaagggatCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTCAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGACTTGAGAGAGGGAAGGGAAGGAAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTTGCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGC---------TCATGCACAC-----ACACTTCGGCTCACTGACTCATTCAGCCACAGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcatgggtgaaaacaaaacggtttttt----aattatcttacagtgctatagct-ca-aagtatgaagta---catctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaaggttgcaggcgagaatctgct-t-ctcacttgtcccatcttataaagtttccca-gttccttggctcctgatccccttcctccttcctcaaaac i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56675621 1158 + 60714840 attggatgtaaacgggtggattacatctgtgttcttcattctgctccattgtttcatgtgcttttctttacgccaatgtcatgctattttgcttactacagctctgtaacatattttcaagtcaggtagtgtgatgctcctgttttctccttATACCTTGAAGTCTCAAGACAGTTGGTGTCACGTACAATGATTATGGGGAAGGGGATGCCAGGATTACCAGGGCCCAACATTAGATAATAGAATGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAAGACAGGCATCCTCACTGCCACACCTCTCTCCTGTCCCGTGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGGTAAGTGAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGggaggcag-agccttggattcaagcgttggctcagcacctgccagctc--tgtgattgtgggcctgtcttccattgtctc---gaaccccagacactccaacagtgaaaaggATCTGGGCCCAGCACAGGGCTCAGTGAAATCTCTTCATCTCTAATTTTCTTCTGCTGAGACCT----CAGGGTAAAAGGATGAGTGCAAATCAGACGTTCTTCTCAGGAAAAATGCAGTGTTTGTTCTGCCTGCACTCCTAACCGGAGGACAAACGCCTGGGGGCTTGACACGGGGAAGGAAGGGGAATATTTT-TGAGGGTGGGGTGTTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAACCCTGGTTGACTTAGCAGAGCAAGAGCTTTGCAGTAAGAGAGAACGTAGT---------TCATCCACACACATGACACTTC----CACTCACTCATTCAGCCACTGCCCCATGCTCACACTGTGCAGTGTGGAACCTtttccta-tgttgccataacaaatttccacaagcttcgtggatggaaaccaca----ttttt-aaaaaatatctcatggtgctgtagctccg-aagtatgaaatgcatcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaaggttccaggcaagaatctgct-tcctcacttttcccagctcctagaggctcccacattccttggctcctggtccccgtcttccttcctcaaagt i ponAbe2.chr19 T 17378 C 0 s rheMac3.chr19 60528165 1156 + 64156825 attgaatgtagatgcatgga-tatatctgtattctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgagatgttcctgttttCTCTCTGTACCATAAACTCTCAAGACAATGGGAAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGTTTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctc--tg--actgtgggcctgtcttccaccatctctctgaactccagacactccaaaagcaaaagggatcttggcccagcacagggctccgtgaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTT-TAGAGAAGATCCACTTGCCAAAGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCATGCACACCTTGCACGC-----ACACTTCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCCGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacggcttttt----aattatcttacagtgctgtagct-ca-aaggatgaaatg---cacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgct-----------tcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaaac i rheMac3.chr19 I 4 I 2 s macFas5.chr19 55650629 1144 + 59248254 attgaatgtagacggatagattatatctgtgttctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgtgatgttcctgttttCTCTCTGTACCGTAAACTCTCAAGACAATGGGCAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGTTTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctc--tg--actgtgggcctgtcttccaccatctctctgaactccagacactccaacagcaaaagggatcttggcccagcacagggctccgtaaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGAAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAG----TGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGATGGTGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAACTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCCAGAGCCTTGCAGTAA--------AGAG----------CCTTGCACGC-----ACACTCCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCTGTGCAGT-TAGAATCCttttctattgttgccataacacatttccacaaaattggtggatgaaaac-aaacggcttttt----aattatcttacagtgctgtagct-ca-aaggatgaaatg---cacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgct-c-ttcacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaaac i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47749590 1158 + 51301725 ATTGGATGTAAATAGGTGGATTACATCTGTGTTCTTCATTCTGCTCCATTGTTTTATGTGCTTTTCTTTATGCCAGTGTcatactgttttgtttactacagctctgtaacatatttttaagtcaggtagtgtgatactcCTGTTTTCTCCTTATACCTTAAAGTCTCAAGATAGTGGGCATCACGTACAATGATTATGGAGAAGGGGATGCCAGGACTCCCAGAGCCCAATATTAGATAACAGAATGTTGGCCAGGAACCAACCTCAAAGATGTCCTTTGAGTAGAACACAGGCATCCTTATTTCCACACCTCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGGTAAGTGAAGGATCCCTCTTACCTCTGCTTTTGAAAACCCAGGGAGGTCGAAGCCTTGGATTCAAGCGTTGGCTCAGCACCTCCCAGCTCTGTG--ATTGTGGGcctgtcttcctc--tgtctctgaaCCCCAGACACTCCAACAACGAAAGGGAtctgagcccagcacagagcTCAGTGAAATCTCTTAACCTCTGATTTTCTGCTGCTGAGACCT----CAGGGTAGAAGGATGAGTGCAAATCAGACGTTGTTCTCGGGATAAATGTGGTGTTTGTTCTGCCTGCATTCCTAACCAAAGGACAAATGCCTGGGGGCTTGAaagggggaaggaaagggaacATTT-TTGAGGGTGGGGTGTTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAACCTTGGTTGACTTAGCAGAGCAAGAGCCTTGCAGTAAGAGAGAACGGAGTTCAT-----CCACGCACAT----GACACTTCCACTTACTGGC----TCAGGCACTGCTCCATGCTCAGGCTGTGCAGT-GTGGACCCTTTTCCTATGTTGCCATAACAAATTTCCACAGGCTTCGTGGATgg-----aagccacattttaaaaaaatatctcaCGGTGCTGTAGCT-CAGAATTATGAAATGCGTcatctcactgggctaaaatcaaggtgacATCAAGGCTGCCTTCCCGCTGAAGGTTCCAGGCAAGAATCTTCTTC-CTCACTTTTCCAAGCTCCTAGAGGCTCCCACATTCCTTGG--TCTGGTCCCCATCTTCCTTCCTCAAAGC i papAnu2.chr19 I 31735 C 0 s chlSab2.chr6 47454619 1157 + 50890351 gttgaatgtagacgaatagattatatctgtgttcttcatttttctccgttgttctgtgcacttttctttatgccaatgtcatgctgttttgtttactacacctctgtaacatatttttaagtcaggtaatgtgatgTTGCTGTTTTCCCTCTATATCTTAAAGTCTCGAGACAATGGGTAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGATCCCAGTGTTGGATAACAGAGTGTTGGCCGTGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTGCCTC-TATTCTAGGAAACCCTTCAAGTACTTGGCCTTCACCCTCTGAACCAAGCTGCAAAACTGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggattcaagccttggctcagcacctcccagctc--tg--actgtgagcctgtcttccaacatctctctgaactccagacactccaacagcaaaaggaatCTGAGCCCGGCACACAGCTCAGTGAAGTCTCTTAATCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAA-GCAGTGTTTGTTCTCCCTGCATTCCTTACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGGTGAGGTGTTT-CAGAGAATTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCACCAGAGTAAGAGCCTTGCAGTAACAGAGAACAGAGC---------TCATGCACGC-----ACACTTTGACTCACTGACTCATTCAGCCATGGCCCCTTGCTCAGGCTGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacagcttttt----aattaccttacagtgctgtagct-ca-aaggatgaaatg---catctcacagagctaaaatcaaggtgacagcaaggctgccttccctctgaaggttccaggcgagaatctgct-t-tctacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttccacaaaac i chlSab2.chr6 I 6 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M a score=88014.000000 s hg38.chr19_GL949748v2_alt 823571 125 + 1064304 ccacaaagactggtcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttcctcatcttttgaaaacttggggattctattgggttc s panTro4.chr19 59712749 125 + 63644993 ccacaaagactgatcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttccccttcttttgaaaacttggagattctattgggttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56676779 128 + 60714840 ccacaaaggctggtcacgtctctcacacggcatcactcagacccttcttccttgtccacacctctttctctgaatgttgctctgccttcttcctcatcttttaagtacttgggcattctatcggaaac i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47750748 127 + 51301725 CCACAAAGGCTGGTCACATCTCTCACATGACATGAGACAGATCATTCTTCCTCA-CCACACCTCTTTCTCTGAATGTTGTTCTgccttcttcctcatcttttaaaGCCCTTGGGATTCTATTGGAATC i papAnu2.chr19 C 0 I 14 s chlSab2.chr6 47455776 126 + 50890351 ccacaaagactggtcacg--tctcacatggcatcactcagacccttcttccttgtccacacctctttctctgaatgttcctctgctttcttcctcatttcttaagggctttgggattttattgggttc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=147141.000000 s hg38.chr19_GL949748v2_alt 823696 336 + 1064304 accaagatgaaaatccgtcataatctcccggaaatcattcaggatacccttgttttaagttcagctgattagcaaccataattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAATGGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGACAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAtttgtt s panTro4.chr19 59712874 336 + 63644993 accaagatgaaaatccatcataatcttccggaaatcattcaggagacccttgttttaagttcagctgataagcaaccataattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatgtaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGTGTTTGGCCTCTGCTCTTGGGACACTGATATTGCGGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAtttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56676907 327 + 60714840 gccaagat---aatccatcataatttccctaaaatcatctaggataccctccttttcagtttagctgattagcaaccataattccatctacaatcttcattcctccttt-aatgtaaaataacatattcacaagatgtggagactgggacatggacattttggggtggagctgcattctcctcctttccacaAATGGTAAACAGGATGCATTTGGCCTCTGCTCTTAGGACCCTGATATTGCAAAGGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAGA-----TTGAT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47455902 333 + 50890351 accaagat---aatctatcatcatctccctaaaatcatccaggataccctcctttccagttcagctgattagtaaccgtaattccatctgcaatcttcgttcttcctctccacgtaaaatcacatattcacaaggtgtgaaggctaggacagggacattttgggggtggggtggattctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGGGAGGAAAGAAAATGAATGCACAAGTGGACCTATAAATGGTTGATCCACTGGGAAACATCGGTGCATGAAattgatttatt i chlSab2.chr6 C 0 I 14 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=883.000000 s hg38.chr19_GL949748v2_alt 824032 7 + 1064304 tgttcgt s panTro4.chr19 59713210 7 + 63644993 tgtttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56677234 7 + 60714840 TGATTGG i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47456235 14 + 50890351 I e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=239009.000000 s hg38.chr19_GL949748v2_alt 824039 590 + 1064304 tcgtttgtt--------tattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcgtctcctggatccaagtgattctcctgcctcaccctctcgagtagctgggattacaggcaactgccaccatgcccggctaattctttttgtatattttttgtag---agaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccgaccatctcagcaacccaaagtactgggattacaggcgtgagccactttgcccagccAGAATTCAAAATAAATAATAGATAATGCTgagtgtataattttgggtgacagagaaggtctcactaatcagatatt---tgtgacattaatgaaaaacacggattgaacccctgaaagattggcggaaggattttccacacacagctgtcagctgtgaaggcacaaaggtgaaaacaatctgatgttgaaggaagaggctctgcctgaaatgctgggaatgaggtggggagaatgacaagatgactgtagagagatGGAGAGCACTCTGGGTACACAGGAAACTAAGGAGGAA s panTro4.chr19 59713217 598 + 63644993 ttgtttgttcatttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcacctcctggatccaagtgattctcctgcctcagcctctcgagtggctgggattacaggcaactgccaccatgcccggctaattcattttgtatattttttgtag---agaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacaggcgtaagccactgtgcccagccAGAATTTAAAATCAATAATACATAATGCTgagtgtatgattttgggtgacagagaaggtctcactaatcagatatt---tgtgacattaatgaaaaacacggattgaacccctgaaatattggcggaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaaacaatctgatgtggaagaaagaggctctgcgtgaaatgctgggaatgacgtggggagaatgacaagacgactgtggagagacggagagcACACTGGGTACACAGGAAACTAAGGAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56677241 590 + 60714840 ttgttttta-----------tgagacagtgtctccctctgtgccccaggctggagtgcagtggcgggatctcggctcactgcagcctccacctcccaggttaaagtgattctcctcactcagcttcccgagaggctgggattacacccatgtcccaccacgcctggctaatttttttttggtattttttttagtgcagacaaggttttaccatgttgcccaggc-tatctcaaactcccaaccttaagggatccgcccgcctcagcctcccaaagtgctgagattagaggcgtgagccacggcgcTGAGCCGTATTTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaagttctcactgatcaaatattacctgtgaccttaacgaaaaaagtagatc-aacccctggaa-attggcggaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaagcaatcttatgttgaaggaagaggctctgcctgaaatgctgggaatggcatggggagaatgacaacacgactgtagagagacggagagcACACTGGGTACACAGGAAACTAAGGAGGAA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47456249 588 + 50890351 ttATGTAtt--------tattaagatggagtctcgctctatcccctaggctgcagtgcagtgtcacgatcttggctcactgtaacctccgcctcctgggttcaagtgattcttctgcctcagcctctcaagcagcttgga-tacaggcacccgccaccacacctggctaattctttttgtagattgttgttag---agaccatgtttcaccatgtggcccagtc-tatctccaactccctatctaaagtaatccgaccgcctcagcctcccaaagtgctcggattataggcgtgaaccccggcacccagccAGAATTTAAAATAAATAACAGATAATACTGAGTGTATGATTTCAGGTCACAGAGAAGTTCTCACTGATCAAATAATACTTGTGATCTTAATGAAAAAAATAGATC-AACCCCTGGAAGACTGGCGGAAGGATTTTCCACACACAGCAGTCAGCTGTGAAGGCACAAAGGTGACAACAATCTTATGTGGAAGGAAGAGGCTCTGCCTGAAACACTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGGA- i chlSab2.chr6 I 14 I 6918 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=398241.000000 s hg38.chr19_GL949748v2_alt 824629 940 + 1064304 CAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGGTAACCAGGAATCCCTACATGATTAATAGTGACTGACAAGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTGCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGTAGATGGATATAAGATATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGA-TTTTCCTACTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTATTATAGCATAATATACAAGTCTGTGAAcggtggctcatgcttgtaacccagccctgcaggaggccaaggcgggtggattccatgaagtcaggagttccagaccagcctggccaacatggtgaaaccctatctgtactaaaaatacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccgtctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACGGATCCTGGAATAGAGAAAGTGCTCTGGTCATCGCAAAAA s panTro4.chr19 59713815 940 + 63644993 CAAGGGGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGTTAACCAGGAATCCGTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGTGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTTGACACTAAGTGGATGAAGCAGATGGATATAAGATATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGA-TTTTCCTACTTGTTCAATCCTCGCTTAATTAAATTCTTTCTGAGATTTATGCATCCTACACATAAACCAATAACTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTATTATAGCATAATATACAAGTCTGTGAAcggtggctcacacctgtaacccagcactgcaggaggccaaggcaggtggatcacatgaagtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaatacaaaaattagccgagcatgctggtgcatccctgtaatcccagctcctattctgcaggatgaagcaggagaatgacttcaatccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccatctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTTCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCGTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCGTGGAATAGAGAAAGTGCTCTGATCATCGCAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56677831 926 + 60714840 TAAGGGGTGTGTGTTTTATACTCACAGCCATTGGACTCACCTCGGGGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAA--AGATGGACACAAGATGTGTTTGTGAGGTAGAGTAATTCGCAAGGAGGGCTTACCTGGTTTGATTTTTCCTAACTGTTTAATCTTCACTTCATTCATTTCTTTCTGAGATTTATTTTTCCTACGTGTAAATCAATACTTGGCAGAGGAGTGATAGATACATGAGGGGTGGTGTGAAGGAAGAGACCTATTATAATATAACACACAAGGTTCTGAAcggtggctcacacctgtaacccaacattttgggaggctaaggcggctggatcaagtgaggtcaggagttcgagatcagcctggacaacatggtgaaatcccatctctactaaatatacaaaaactagctgggcgaggtggcgcatgcctgtaataccag---ctattcgggaagctgaagcaggagaatggcttcaaccagggagggagaggtttcagtgagccaagatcacgtcattggactgcaccctaggtgacagagtgagactccatctcaaaaaataaaaataaaaaaTACATAAATATAATATAACATACACGAATGACAAAGGCACACCAATTCCAATCATCATCTTTCTATTTCTCTATAATGACTTCTTTGATCCTTTATCTTATTCATAAGAAAATCAGGTGAAAACATCTTCCCTATTTGGTTTTCTATGACCATGAGATCATACGGAAAATGTGA----------AACCCACCAGCACAGGTCCTGGAATAGAGAACATGATCTGTTCATGGCATAAA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47463755 935 + 50890351 CAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCGGGCTAACTAGGAATCCCTACGTGATTTATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCACCTCACTGGTGAAATATGTTGCGTATTTAAACACTAAATGAATGAAGTGGATGGATACAAGATGTGTATGTGAGGTAGAATAATTCACAGGGAGGGCTTGCCTGGTTTGATTTTTCCTAATTGTTCAATCTTCACTTCATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATACCTGGCAGAGGACTGATTGATACATGAGGCGTGGTGCAAAGGAAGAGACTTATTATAATATAACACGCAAGGTTGTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggcggatggatccattgaggtcaggagttcaagaatagcctggacactatgctcaaacccaag-tctactaaataaacaaaaactagctgggtgtggtggcgcatgcctgtaataccag---ctattcgggaggctgaagcaggagaatggcttccacccgcgaggcagaggtttcagtgagccgagatcgc-tcattggactacaccctgggtgacagagtgagactctatctcaaaaaataaaaatacaaaaCACATAAATCTAATATAGCATACAGGAATGACAAAGGCACTTCAATCCCAATTATCATTTTTCTGTTTCTCTATAACGACTTCTTTGATCCTTTATCTTATTCATTAGAAAATCAGCCAAAAACGTCTTCCCTATTT-GCTTTCTGTGAGCCTGAGATCATATGGGAAATATGAAAGGCCCCTGAACCCACCAGCACAGGCCCTGGAATAGAGAAAGTTCTCTGTTCATGGCATAAA i chlSab2.chr6 I 6918 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=817796.000000 s hg38.chr19_GL949748v2_alt 825569 1164 + 1064304 AAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGG-AAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGACAGCACTAGCTCCTGTTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGTCGAGGGGGTGGTCCTT-CCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACATTTCACACGGGCTTCAACACTATTTCCTGGCTGTTTGACATAAGAGAATCTTGCTTCGCTATTTTTAATCGTGATTTCACCTTTGTTTCCTTTCCTTGGTGAATGCAATTTGTTTGACTCAAGAATGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACAAATCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacgttacat-aggcaggttcattactaacagataagcagcgagtgacaacagaagcctgcatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgcgggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggatgttgctatcttagtccatttttgttgctctaaaggaacacttgagcctgggtaacttctaaagaaaagagattggtttgcctcacagttctgcaggctgtactggaagcatggcaccagaatctatttctcgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccgcagagatcacacggcaagagagagagtaagggggagagggagcgatggagcttccaagctctttttaacaaccagctctccagga-actaacagagggggaacttgctaaccccgtctcct s panTro4.chr19 59714755 1162 + 63644993 AGA-CTTACCCTGTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGATAGGCCATGGGGAGGTAAACATTAATGCTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCTTT-TCCCCAGCCTATCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTTCACACGGGCTTCAACACTATTTCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTA-TCTTGCTTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAAAGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGACTGCACCTGGGTCTATGCCAATTCCTGTCACTCACCGTCACtccagggagacagaacacacagagaatacgttatat-aggcaggttcattactaacagataagcagcgagtgacagcagcagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgggggaggccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccagcctgttctgagacgttcctcctgatctcaggacgttgctgtcttagtccatttttgttgttctaaaggaacacttgagcctgggtaacttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctccccctctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacagcaagagagggagcaagggg-agggggagcaatggagcttccaagctcttttgaacaaccagctctccagga-actaatagagggggaacttgctaaccccgtctcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56678757 1152 + 60714840 A---CTTGCCCCTTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCATATTAAGTGACACAGATAGATCATGGGGAGGTAAAAACTAATATTCTTTG----GAGTTCAGATCTTAGACTCAGAGACCAGTGCCAGCACTATCTCCTGGTCACCTTTTGGACTAATTCACAGAAAGACAGGCTGTATTGAAGCAACAGATGAGGGAGGGGGTGGTCCTT-CCCCGGGACTCTCGGGTGGAACAGCAGCCTAATATCTGACTCCCAAGATCACAAA-AGTAGCACATTGCCCACGAGCTTCATCATCGTTTCCTGGCTGTTTGATATAAGACAGTTCAACCTCACTTCTGTTGATTTCAACGTCACTGTTTTTGCCTTTACGTGGAGAATGTAATTTGTTTGAGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCGCTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacaccccaggtactgcacctggggctgtaccaatttctatcactcaccgtcactccagggagacagaacacacagagaatacattacat-aggcaggttcattacttatagataagcagcaagtgacaacagaaaccttcccttcagggtgagccagtccgccaaggctcagaaaaactgctcaggacacatggagtcacctcatgtgcactgtagctgggggaacccagaaagcagcccagcctgggtgttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacatgccaggctgttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaagaacacttgagcctgggtatcttctaaagaaaagagatgtgtttggctcactgatctgcaggctgtactagaagcaggacaccagcatctatttttggctgcggcctcaggctgctcccactctgacagaagacaaggggggcctgcgtgtgcagagaacacggagatcacatggcaagagagggagaaagggg------gtgtaatggagcttccaagctctttttaagaatcaactctccagggcactaatagagggagaacttgctaaccccgtcctct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47750889 1150 + 51301725 AAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGGTAAAAACTAATATTCTTTG----GAGTTCAGATCTTGGACTCAGAGACCAGCATCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCAAGGCAATAGATGATGGAGGGGGTTGTCCTT-CCTCCGGACTCTCAGGTAGAACAGCAGCCTAATATAGGACTCCCGAGATCACAAAAAGGAGCCCGCTCTTCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATATTTCAGTTCTACTTCACTGTTTTGA-TCTTGATTTCACTTT--ATGCCTTTTCTTGCCAAAAATAATGTGTTTGAGTCAAGAGGGTTGTGGCCGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCACTCACGGTCACTCCAGGGAGACAAAACACACAGACAATACATGACATAAGGTGGGTTCATTACTAATACATAAGCAGCAACTGACAACAGAAGCCTACATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGAGAACCCAGAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGGCGTCCTCCTCTGGCACGAACAGGAAGACAGTCCAG-CCGTTCTGGGACATTCCTCCTGATCTCAGGACGttgctgtcttagtccatttttgaGGATGTGAAAGAACATTTGAGCCTGGGTAACTTCTACAGAAAACAGATTTGGTTGGTTCACGGTTCTGCAAAGTGTACAAGAGGCAGGACACCAGCATCTATTTCTGGCTGCGGCCTCAGGCTGCTCCTACTCTGGTAGAAGAGAAGG-GGGCTTCCATGTGCAGAGACCACCGAGAGCACACGGCAAGACAGGGAAAAACGGG------GTGTGATGGAGCTTCCAAGCTCTTTTTAAGAACCGAGTCTCCAGAGTACTAATAAAGGGAGAAT-TGCTAACCCTGTCGTG- i papAnu2.chr19 I 14 C 0 s chlSab2.chr6 47464690 1149 + 50890351 ---ACTTGCCCCCTCAGCCAAATCCCCCACCTCACGCCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGATAAAAACTAACATTCTTTG----GAGGTCAGACCTTGGACTCAGAGACCAGTGCCAGCACCATCTCCTGGTCACCTTTTGTACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTGCCCCCGGACTCTCAGGTAGAACAGCAGCCTAATATATGACTCCCGAGATCAC-AAAAGTAGCACGTTCTTCACAAGCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACTGTTTTGA-TCTTGATTTCACGTT--ATTCCTTTTCTTGCTGAATGTAATGCGTTTGAGTCAAGTGGGTTGTGGCTGTAGAAATTGTAAGGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTactgcacctggggctatgccagcttctatccctcaccgtcactccagggagacagaacacacagagaatacatcacgtaaggtgggttcgttactaacagataaccagtaagtgacaacagaagcctgcatttcagtgtgagccagtcccccaaggctcagaaaagctgctcgggacatatggagtcactccatttgcactgcagctgagggaacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggacgaacaggaagacagcccag-ctgttctgggactttcctcctgatctcaggatgttgctgtcttagtccatttttgtggctgtaaaagaacacttgagcctgggtaacttctacagaaaagagaattggtcgactcacggttctgcaagctgtactagaggcaggacatcagcatctatttctggctgcggcctcaggctgctcctactctggtagaagagaagg-gggcctacatgtgcagagaccaccgagatcacacggcaagacagggagaaacggg------gtgtgatggagcttccaagctctttttaagaaccaactctccagagtactaatagagggagaacgtgctaaccctgtcgtgt i chlSab2.chr6 C 0 T 21560 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=41096.000000 s hg38.chr19_GL949748v2_alt 826733 52 + 1064304 tgggacagcattgatctgttcatgatggatccacctccatgacccaaacacc s panTro4.chr19 59715917 52 + 63644993 tgggacagcattgatctgttcatgatggatccacctccatgacccaaacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56679909 52 + 60714840 ggggacagcattaatctattcatgatggatccaccccgctgaccaaaacacc i ponAbe2.chr19 C 0 I 1922 s papAnu2.chr19 47752039 52 + 51301725 TGGGGGAACATTAATCTATTTATGatggatccacccccatgacccaaacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47444279 52 + 50890351 ggggacagcattgatctattcatgatggatccacctccatgacccaaacacc i chlSab2.chr6 T 21560 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=1278.000000 s hg38.chr19_GL949748v2_alt 826785 4 + 1064304 tctg s panTro4.chr19 59715969 4 + 63644993 tccc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47752091 4 + 51301725 tccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47444331 4 + 50890351 tccc i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56679961 1922 + 60714840 I e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=79392.000000 s hg38.chr19_GL949748v2_alt 826789 124 + 1064304 aagaggcccaacctcccacaatgggggtgaaatttcaatgtgaggtttgaaagggtcaaacatctcaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataattgag s panTro4.chr19 59715973 124 + 63644993 aagaggcccaacctcccaccctgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagttgtatcctcagcacattctatggttactatgagagctgtaactgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56681883 124 + 60714840 aataggcacaacctcacacactggggattaaatttcaaagtggagtttggaggggtcaaacattgaaactgtaacagttgtatcatcagcacattctattgttgttatgaaaactataactgag i ponAbe2.chr19 I 1922 C 0 s papAnu2.chr19 47752095 124 + 51301725 aataGGCACCACCTCCCACACTCAGGGTTAAATTTCAGAGTGAAGTTTCGGGGGGTCAAATATCCATACGATAGCAGGTGTCTCATCCGCACATTCTGTAGTTATTACGAAAACTATAACTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47444335 124 + 50890351 aagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagttgtatattcagcacgttccatggtgaccgtgagagctgtaaccgag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529321 2 + 64156825 I a score=1763.000000 s hg38.chr19_GL949748v2_alt 826913 2 + 1064304 aa s panTro4.chr19 59716097 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682007 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55651773 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47752219 2 + 51301725 AA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47444459 2 + 50890351 ag i chlSab2.chr6 C 0 I 32610 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60529321 2 + 64156825 I a score=86035.000000 s hg38.chr19_GL949748v2_alt 826915 59 + 1064304 agcaggggaaagctaggtcTCCCGCCATTTGGGTGCTTGTCCTAAAGAGACGTTGTATG s panTro4.chr19 59716099 59 + 63644993 agcaggagaaagctgggtctcccaccatctggatgcttgtcctAAAGACATGTTGTATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682009 59 + 60714840 agcaggagaaagctgggtcTCCCACCAAGTGGGTGCTTGTCCTAAAGAGGTGTTTTATG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60529323 59 + 64156825 agcaggagaaAGCTGGGTCTCCCGACATCAGGCCGCTTGTCCTAAGGAGACATTCCACA i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55651775 59 + 59248254 agcaggagaaAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATTCCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47752221 59 + 51301725 AGCAGGAGAAAGCTGGGTCTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATG i papAnu2.chr19 C 0 I 6649 s chlSab2.chr6 47477071 58 + 50890351 AGCAGGAGAAAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATT-CACA i chlSab2.chr6 I 32610 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M a score=1534513.000000 s hg38.chr19_GL949748v2_alt 826974 925 + 1064304 TGGTTACCTGCCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAGACACCTACATGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCGACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCGGATGTGTGTTCCTCACCAGCAGGATGGTCCCTGGCCCAAGACAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGATTCCCTTCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGGATGGGACCTCAGAGCTATTCATGGGATGGGTCCTTGAACTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTCTTTTGTTGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGCGAGGTAGGTGCTCCTCCGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGACCATCAGGAGGTGTCATACGCATAATTGGATCACTGTGTTTTCACACAGAGAAAAATCACTCGCCCTTCTGAGAGGCCCAAGACACCCCCAACAGATACCAG s panTro4.chr19 59716158 925 + 63644993 TGGTTACCTGTCAATCAAGAAATGCAACACAATTCATAAATAGGAACTGCCATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACTCCAGACACCTGCACGTTCTGATTGGGACCTCAGCGGTCATCAtcctcctcatcctcctcctcttctttctcctTCATCGCTGGTGCTCCAAAAAAAAAAGTAAGTCTCACAAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAACAGGATGGGAACACTCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGTAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCACAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCAAGCTGTTTTGTTGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAATAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCTGTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACACTTGGATCACTGCGTTTTCACACAGAGAAAAATCAATCCCCCTTCTCGGAGGCCCAAGACACCCCCAACAGATACCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682068 926 + 60714840 TGGTTGCCTGGCAACCAAGAAATGACAGACAATCCACAAAGAGGAACTGCTATGGTTAGCTTCTTATTGGATTCCCATCTTCCTCCAGGTATCGCCAGGCACCTGCATGCTGTGATTAGGTACTCAGTGGCCATCATCCTCTTCACCACCCTCCTCTTCTTTCTCCTTCGTCGCTGGTGCTCCAAAAAAAAAAGTAAGCCTCGTGAAGCAGAGGCCAGAGAACTCAGGGCCCTGTGGGGAAGCAGGATGAGAGCACGCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGTCCCAAGGCAGGAGC--CAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTAATTGTGAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAAGAGAAGGTTCCATGACAGGCAGAAAATGGGAGATAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGAATGGGGTCTTGCACTCAGAGAGATGGAATCTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTGTGTTGGTATCTGTTCATGAAATGGGGACCCAGAAGTGCCCTCCCAGCTGTTTCGATGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACGGTGAACACGGAGGTAGGTCCTCCTCGGCCCAGCCTCATGGATACAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCATTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCAGTGCATTTTCACACAGAGAAAAATCACTGGCCCTTCTCAGAGAACCAAGAGACCCCCAACAGATACCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60529382 923 + 64156825 TCGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAACAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTTTTCTTCCTCCAGGTAACCCTAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCGGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGAAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCGTGACAGGCAGAAAGTGGGAGGCAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAGGCACCTCAGGCATCTACGGCCTCCCCCTGTGTGTTGTAATCTGCACATGAAATGAGGACCCAGATGGGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAG-CCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55651834 923 + 59248254 TGGTTACCTGTCAATCAAGAAATGAGAGACAATCCATAAGAAGGAAATGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGCCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTTCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGATAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAAGCACCTGAGGTGTCTACGGCCT-CCCCTGTGTGTTGGGCTCTGCACATGAAATGAGGACCCAGAAGTGCCCTCCCAGCTGTTTTGATGCCTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGTCCAGCCTCATGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAGCCCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACCCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTTGCCCTTCTCAGAGGCCCAGGAGACCCCCAACAGATACCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47758929 922 + 51301725 TGGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAAGAAGGAACTGCTATGATTAGCTTCTTATTCGTGTCTCTTCTTCCTCCAGGTATCCCCGGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCCCTTCAcca---tcttcttctttctcctgcatCGCTGGTGCTCCAACAAAAAGAGTAAGTCTTACGAAGCAGAGGCCACAGACCTCAGGGCTGAGTGGGGAAGCGGGATGGGAGCACACAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTATATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAAGAGTCTTGAACTCAGAGAGATAGACTGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACAGTCTCCCCCTGTGCGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCTGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGACTCGTAGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAG-CCCCTCCCTCACTCAACA-TTCCCTCTCTCCAGGACTCTGAAGAAGAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i papAnu2.chr19 I 6649 C 0 s chlSab2.chr6 47477129 922 + 50890351 TGGTTACCTGTCAATCAAGAATTGAGAGACAATCCATGAAAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCATCCAGGTAACCCCAGACACCTGCATGTTGTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCCACAAAAAGAGTAAGTCTCACGAAGCAAAGGCCACAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGATGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTAGGAAGCAGAATCACTGGGATGCCAATTGAGAGCCATTTATGGGAAGGGGTCTTGAACTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACGGCCT-CCCCTGTGTGTTGGACTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTCCTTTGATGACTTTTGTCTCCTCCAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGGCCCAACCTCGTGGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAG-CCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M a score=20366.000000 s hg38.chr19_GL949748v2_alt 827899 9 + 1064304 CATGTACAT s panTro4.chr19 59717083 9 + 63644993 CGTGTACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682994 9 + 60714840 TGTGTACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103247882 9 - 106955855 CGTGTACAC i nomLeu3.chr10 M 8807 C 0 s rheMac3.chr19 60530305 9 + 64156825 CGTGTACAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652757 9 + 59248254 CGTGTACAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47759851 9 + 51301725 CGTGTACAT i papAnu2.chr19 C 0 I 338 s chlSab2.chr6 47478051 9 + 50890351 CGTGTACAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T a score=2403554.000000 s hg38.chr19_GL949748v2_alt 827908 1090 + 1064304 AGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTTCTGTCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacctgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctgcctcttaacacagcacttagacacg--------------------tgctgttccacctcccttcagactatctttcagccttctgccagcagtaaaacttataaatttttt-aaataatttcaatgtagttttcccgccttcaaataaacatgtctgccctcATGGTTTCGGTAACGAGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATCATTACCATGTCCACATAACCCCATCTGTTCTCCATTGGGTTCTCAGCCCTGGACTCTGAGCTTCTGGAAGCAGAATGGAGCCTGATTTGTCTCTGAGACTCCAATTTCCATCCAAAGATACAGCACATAGGAGGCTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACATATCATCTTTCATAATATAAATATAcagtcggtcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatattttcagaaaaaaatccccgaagtttcaagaagcaaaaaactatgttgaatcgacacaaattgagtggcgtgtaggctgtgtcaggaattataagtaatcaagggatgatttcatgtatacaggaggatgtgcatgggtt s panTro4.chr19 59717092 1111 + 63644993 GGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTGGGGAGACAACAGCCCTGTCTCTAAACTGGGTTGCCAGCTCCCATGTACTAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTCAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCTACCGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacctcctagt-ctacctaaggctgtgatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacggcacttaggcacgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAGCAGTAAAACTTATACATTTTTTAAAATAATTTCAATGTAGTTTTCCCTCCTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTCCCGGTGTTATCAGTACTATGTCCACGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTGGTCTCTGAGACTCCAATTTCCATCCAAAGATGCAGCACACAGGAGGTTCCAAGGATCGTGAATCAGATGAACAAGTCATATTCTTACTCCCTGCAGACCTGCAAAGCTGGCAGAGTCATTCCATGATGAAACATTTGTAGAGTCATAAGCCCTGTTAGTCTCATCTCCACAGGGACACACATCAACACATCATCTTTCATAATATAAATATAcagtcactcctccatatctgtggggtttacagctgtttattgaaccaacaataaatcaaaaatattttgaggaaaaaatccccgaattttcaaaaagcaaaaaactatgttgaatcgacacaaattgagtggcgtgtaggctgtgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56683003 1091 + 60714840 AGAACTTCCAAATGCTGAGCCCAGAGC----GTTGTCTCCTTCCCACAAGCACCACAGACAGGCCTTGATGGGATCTTCTAGAGAGACAATAGCCCTGTCTCAAAATCAGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCCGAAGGCGTCAGTCTGCATCTTAGAGCATCGTTCTTCCTCACACCACAAATCTG---GTGTCTCTCTCTTGCTTACTAATGTCTATGGTTCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCGTAGCCCACAATTGTCCATTTCACTTCAcccctggccacctctccagcctaactggcttacttcctagt-cctactgaggaagttcctacactgaggaactcacaattccaaacatacaagaggctccctcttaacacggcacttagacacgtgctgttccaccttacttgatgctgttccacctttcctcaggctatttttcagccttctggcatcagc-AACCTTATAAAATTTTT-TTATGATTTCAATGTAGTTCTCTCCTCTTCAAATAAACGTGTCTGCCCTCATTCTTTAGGT-----GACTCTTTTATTGCCGAAAGTTTCCGGTGTTATCATTACTATGTTCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTCATTTGTCTCTGAGACTCCAATTTCCTTCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGCAGAGCCGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCACACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttatggaaccaaatataaatcaaaaatattcagag-aaaaaatccacaaagtttcaaaaagc--aaaactatgttgaatggacacaaataaagctgtgtgtgggctgtatcagga---ataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt i ponAbe2.chr19 C 0 T 94031 s nomLeu3.chr10 103247891 1104 - 106955855 GGAACTTCCAAATGCTGATCCCAGATCCAAAGTTGTCTCCTGCCCACAAGCACCACAGTCAGGCCTTGAGGGGGTTTTCTAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATTGCTCTTCCTCACACCACAAATCTG---GTGTCTCTCTCTTGCTTACAAATGTCTATGGTTCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCTATTTCACTTGacccctgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcgatcacactgaggaactcacaattccaaacacacaagaggctccctcttaacacggcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcagactatctttcagtcttctgtcatcagtAAAATTTATAAATTTTTT--TATAATTTCAATGTAGCTCTCTCCTCTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGTGACTCTTTTTTGGCTGAAAGAAACCGGTGTTATCATTACTATGTCCATATAACCCGATATGTTCTCCACTGGGTTCTCAcccctggactctgagcctctggaagcagggtggagcctgatttgtctctgggactccaatttccttccaaagatgcagcacataggaggttccaaGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACCATGAAACATTTGTAGAGTCACAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCATACTAGAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaagtataaatcaaaaatagtcaaag-aaaaaatccacaaagttccaaaaagc--aaaactatattgtatggacacaagtgaggtggtgtgtaggctgtatcaggaattacaagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60530314 1105 + 64156825 GGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTCGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctgccCCCAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAATTTTTT--TATCATTTCAACGTAGCTCTCTCCTCTTCAAATAAACACCTCTACCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACTATGTCCATATAGCCCCATATGTTCTCCAATGGTTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTGGTTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGGACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgaggggtttacaggtgtttattgagccaactataaatcaaaaatattcagag-aaaaaatccacaaagttccaaaaagc--aaaactatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctagagatgatttcatgtacacaggaggatgagcatgggtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652766 1104 + 59248254 GGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTGCTAGGGAGACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTGCCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAATTTTTT--TATCATTTCAATGTAGCTCTCTCCTCTTCAAATAAACACGTCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTGGCCGAAAGTTTCTGGTGTTATCGTTACTATGTCCGTATAGCCCCGTATGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGGACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgaggggtttacaggtgtttattgagccaactataaatcaaaaatattcagag-aaaaaatccacaaagttccaaaaagc--aaaactatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctagagatgatttcatgtacacaggaggatgagcatgggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47760198 1104 + 51301725 GGAGCTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACAGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCTGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACAGCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGGGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACGGCACTTAGACACATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCAGATTATCTTTCAGCCTTCTGTCAGCAGTGaaacttataaatttttt--tatcatttcaatgtAGCTCTCTCCTCTTCAAATAAACACCTCTGCCCTCATCTTTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACCATGTCCATGTAGCCCCATATGTTCTCCGCTGGGTTCTCACCCCTGGACTCTGAGCTTCTGTAGGCAA-GTGGAGCCTGATTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCAT-CTTCATACTATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagag-aaaaaatccacaaaatttcaaaaagc--aaaactatgttGAATGGACACAAATGCAATGGTGTGTAGGCTGTGTCAggaattataagtaatctagagatgatttcatGTATACAGGAGGATGAGCATGGATT i papAnu2.chr19 I 338 C 0 s chlSab2.chr6 47478060 1103 + 50890351 GGAACTTCCAAATGCAGAATCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCATCAGGCCTTGCAGGGGTCTTCTATGGAGACAACAGCCCTGTCTCAAAACCGGCTTGACAGCTCCAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAACGTCCCCACTGCCTGCTGCAGAGAAAACCCACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctgctggaggctgcagtcacactgaggaactcagaattccaaacatacaagaggctccctcttaacagagcacttagacacgtgctgttccaccttccctcatgttgttccacctcccctcAGACTATCTTTCAGCCCT-TGTCAGCAGTGAAACTTATAAATTTTTT--TATCATTTCAACGTAGCTCTCTCCTCTTCAAATAAACACATCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCGTATAGCCCCATATGCTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTCCATCCAACGATGCAGCACATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCCTTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCAT-CTTCATACCATAAATACAcagtcgctcctccagacctgtggggtttacaggtgtttattgaaccaactataaaccaaaaatattcaggg-aaaaaatccacaaagttccaaaaagc--aaaactacgttgaatggacacaaatggaatggtatgtaggctgtgtcaggaattataagtaatctagagatgatttcatgtagacaggaggatgaggatggatt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T a score=18437.000000 s hg38.chr19_GL949748v2_alt 828998 8 + 1064304 ctatgcaa s panTro4.chr19 59718203 8 + 63644993 ctatgcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590063 8 + 60714840 atatgcaa i ponAbe2.chr19 T 94031 C 0 s nomLeu3.chr10 103248995 8 - 106955855 atatgcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60531419 8 + 64156825 atatgcaa i rheMac3.chr19 C 0 T 4380 s macFas5.chr19 55653870 8 + 59248254 atatgcaa i macFas5.chr19 C 0 T 16226 s papAnu2.chr19 47761302 8 + 51301725 ATATGCAA i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47479163 8 + 50890351 atatgcaa i chlSab2.chr6 C 0 T 75230 e calJac3.chr22 3389202 1795 - 49145316 T a score=54.000000 s hg38.chr19_GL949748v2_alt 829006 1 + 1064304 t s panTro4.chr19 59718211 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590071 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249003 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47403941 1 + 50890351 t i chlSab2.chr6 T 75230 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e papAnu2.chr19 47761310 1 + 51301725 I e macFas5.chr19 55653878 16226 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=4014.000000 s hg38.chr19_GL949748v2_alt 829007 12 + 1064304 tgctatgcta-tt s panTro4.chr19 59718212 13 + 63644993 tgctatgctattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590072 13 + 60714840 tgctaggcttttt i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103249004 12 - 106955855 cgctgtgccatt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47761311 12 + 51301725 CCCTGTGCCATT- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47403942 12 + 50890351 tgctatgccgtt- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55653878 16226 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=1820.000000 s hg38.chr19_GL949748v2_alt 829019 2 + 1064304 tt s panTro4.chr19 59718225 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590089 2 + 60714840 tt i ponAbe2.chr19 I 4 C 0 s papAnu2.chr19 47761323 2 + 51301725 TT i papAnu2.chr19 C 0 T 35977 s chlSab2.chr6 47403954 2 + 50890351 tt i chlSab2.chr6 C 0 I 22 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249016 0 - 106955855 C e macFas5.chr19 55653878 16226 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=335956.000000 s hg38.chr19_GL949748v2_alt 829021 305 + 1064304 tttttttttttgagacagtctcactctctcacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcgattgtcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaa-tttttttgtgtgtgtatttttagtagagacggggtttcagaatgttggaccagctggtcttgaactcctgacctcgtgatctacccaactcagcctcccaaagtgctgggattacaggcgtgagccacggtgcccagctt s panTro4.chr19 59718227 306 + 63644993 tttttttttttgagacagtctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcgagcgaatctcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaattttttttttttttgtatttttaggagagatggggtttcagaatgttggatgggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcatgagccacggtgcccagctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590091 301 + 60714840 gttgttgttttgagacagtctcagtctctcacccaggctggagtgcagtggcgcgatctcagctcactgcagcctccccctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctaggattacaggcatgtgccaccatgcacagataaattttttttat-----tatttttagtagagatgggctttcagaatattggaccggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattccaggcgtgagccagggcgcccagctt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55637652 298 + 59248254 tttgtttgttttTcggagtctcactctctcacccaggctggagtgcagtggcacgatctcagctcactgcaacttctgcctcccaggttcaagtgattctcttgcctcagcctccccagtag------ctaggattacaggcacgtgccaccatgcacagataaattttttttcg--ttgtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttggaattacaggcgcgagccaccacgcccagctt i macFas5.chr19 T 16226 I 15929 s papAnu2.chr19 47725348 298 + 51301725 tttgtttgtttttcggagtctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacttccgcctcccaggttcaagtgatcctcttgcctcagcctccccggtag------ctaggattacaggcatgtgccaccatgcacagataatttttttttct--ttgtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttgaaattacaggcacgagccaccacgcccagctt i papAnu2.chr19 T 35977 C 0 s chlSab2.chr6 47403978 298 + 50890351 tttgttcatttttcggagtctcactctctcacccaggctggagtgcagtggtgcaatctcagctcactgcaacttccaccccccaggttcaagtgattctcttgcctcagcctccctggtag------ctaggattacaggaacgtgccaccatgcgcagataaattttttttct--ttgtatttttagtagagactgggtttcactatgttgagcaagctgttctcgaactcctgaccgcatgatccacccaactcagcctcccaaagtgttgggattacaggcgcaagacaccgcgcccagctt i chlSab2.chr6 I 22 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249016 0 - 106955855 C e rheMac3.chr19 60531427 4380 + 64156825 T a score=14362.000000 s hg38.chr19_GL949748v2_alt 829326 12 + 1064304 cgctatgccatt s panTro4.chr19 59718533 12 + 63644993 cactatgccatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590392 12 + 60714840 cactatgccatt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55653879 12 + 59248254 cgctgtaccatt i macFas5.chr19 I 15929 C 0 s papAnu2.chr19 47725646 12 + 51301725 cacTGTGCCATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47404276 12 + 50890351 cactgtgccatt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249016 0 - 106955855 C e rheMac3.chr19 60531427 4380 + 64156825 T a score=176472.000000 s hg38.chr19_GL949748v2_alt 829338 114 + 1064304 tcatgcaaggggcttgagcatctgcagattttggtatctgaatgggga-------tcctggaaccaatcacccaggaatagtgaaggaccacAGTATATAATTTTTATTTGTCAATCTTAA s panTro4.chr19 59718545 114 + 63644993 tcatgcaagaggcttgagcatctgcagattttggtatctgaatgggga-------tcctggaaccaatcacccaggagtagtgaaggaccacGGTATATAATTTTTATTTGTCAATCTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590404 113 + 60714840 tcatgcaagaggcttgagcatctgcagattttgatatctgaatgggga-------tcctggaaccaatcacccaggaatagtgaaggaccactgTATATAATTTTTTTTTGT-AATCTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249016 121 - 106955855 tcatgcaagatgcttgaacacctgccgattttggtgtctggtagggagggggttttcatggaaccaatcacccatgaatagtgaaggacaactgTATATAATTTTTATTCATCAATTTTAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55653891 114 + 59248254 ttatgtaagaggcttgagcacctgcaggttttggtgtcagagcagaga-------tcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATAATTTTTATTCATGAATTTTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47725658 114 + 51301725 TCATGCAAGAggcttgagcatctgcagattttggcaTCTGAatgggga-------tcctggaaccaatcacCCAGGAATAGTGAAGGACGACCgtatataacttttatttgccaatttaaa i papAnu2.chr19 C 0 I 315 s chlSab2.chr6 47404288 114 + 50890351 tcatgcaagaggcttgagcatctgcagattttggcatctgaatgggga-------tcctggaaccaatcacccaggaatagtgaaggacgactgTATATAATTTTTATTTGCCAATTTTAA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=17157.000000 s hg38.chr19_GL949748v2_alt 829452 15 + 1064304 AAATAAAGCATAAAA s panTro4.chr19 59718659 15 + 63644993 AAATAAAGCATAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590517 15 + 60714840 AAATAAAGCATAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249137 14 - 106955855 AAATAAATCATCAA- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55654005 14 + 59248254 AAATAAATCCT-CAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726087 15 + 51301725 aaataaagcataaaa i papAnu2.chr19 I 315 C 0 s chlSab2.chr6 47404402 15 + 50890351 AAATAAAGCATAAAA i chlSab2.chr6 C 0 I 325 e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=5024.000000 s hg38.chr19_GL949748v2_alt 829467 10 + 1064304 AGTTTACAAC s panTro4.chr19 59718674 10 + 63644993 AATTTACAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590532 10 + 60714840 AAAGTACAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249151 3 - 106955855 -------AAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55654019 10 + 59248254 AATGCACAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726102 10 + 51301725 aatgtataac i papAnu2.chr19 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47404417 325 + 50890351 I e rheMac3.chr19 60531427 4380 + 64156825 T a score=441909.000000 s hg38.chr19_GL949748v2_alt 829477 286 + 1064304 AACAAGATAAAA-AATAAGAAGTGTCTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacagttttctgcccagtggttctctgtatcccctctcatgaggatgctgcatttcatataaacttatagaaccccttaaaatttggtaacctgagttctctg-----------------------------attt s panTro4.chr19 59718684 286 + 63644993 AACAAGATAAAA-AATAAGAAGCGTTTTTAAAgtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacacttttctgcccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaaccccttaaaatttggtaacctcagtcctctg-----------------------------attt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590542 285 + 60714840 AAGAAGAT-AAA-AATAAGGAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttattttttgagaaaatattctattccaccttcaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcactttatgtaaccttatagaaccccttaaaatttggtaacctgagtcctctg-----------------------------attt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249154 286 - 106955855 AATAAGATAAAA-AATAAGCAGTGTTTTTACGGtgtgaaaataagcttagatttattttttcctatgtgtaaccctctggtccagtgtcatttattgagaagacattctattccaccttaatccacacggcagcctctgtcaactacaa----agggactgtgtgtgcacagatgtattttacacactgttttctgctcagtggctgtctgtgtccactctcatgaggatgctgcactttatgtagccttatagaaccccttacaatttggtagcctgaatcctcaa-----------------------------attt i nomLeu3.chr10 C 0 I 24011 s macFas5.chr19 55654029 313 + 59248254 AATAAGATAAAACAATAAGCAGTGTTTTTACAGTGTGAAAATAAGCTTAGATTTATTTTTTCCTACGTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCCACCTTAACCCACATGGCAGCCTCTGTCAACTATAA----AGGGACTGTGTGTACACGGATGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGAGGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAGCCTGAATCCTCTAATTTCTCCTTCCTCTTTAAGATTGCCATTATT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726112 285 + 51301725 aacaagataaaa-aataagaagtgttTTTATAATGTAAGGATaagttcagatttattttttcctacttgTAACCCTGTGGTCCTGTGTTATTTGTTGAGAAAATATTCTATTCCACCTTAAACCACATGGCAGCCTTTGTCAACTATAA----AGTTGCTGTGTATCCACGGATGTATTTTAGACACAATTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTCATGAGGATGTTGTACTTTATATAACCTTGGAGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-----------------------------TTT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47404742 289 + 50890351 AACAAGATAAAA-AATAAGAAGTGTTTTTATAATGTGAGGATAAGTTCAGATTTCTTTTTTCCTACTTGTAACCCTGTGGTCCTGTGTTATTTGTTGAGAAAATATTCTATTCCACCTTAAACCACATGGTAGCCTGTGTCAACTATAAATTTAGGAGCTGTATATCCACGGATGTATTTTAGACACAGTTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTCATGAGGATGCTGTACTTTATATAACCTTAGAGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-----------------------------TTT- i chlSab2.chr6 I 325 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=25512.000000 s hg38.chr19_GL949748v2_alt 829763 22 + 1064304 gttattATAGGTTATTTAGttt s panTro4.chr19 59718970 22 + 63644993 gttattATAGGTTATTTAGttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590827 22 + 60714840 gttattATAGGTTATTTAGttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55654342 22 + 59248254 ATTATTATAGGTTATTTGCTTT i macFas5.chr19 C 0 T 15632 s papAnu2.chr19 47726397 22 + 51301725 GTTGTTataggttatttttttt i papAnu2.chr19 C 0 I 10 s chlSab2.chr6 47405031 22 + 50890351 GTTGTTATAGGTTATTTAGTtt i chlSab2.chr6 C 0 I 9 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e rheMac3.chr19 60531427 4380 + 64156825 T a score=149682.000000 s hg38.chr19_GL949748v2_alt 829785 126 + 1064304 gc------ttttttttttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggcttgagctcagctcactgcagcctccgcctcccaggttcaagcaattctcgtgcct----cagGTTTAG s panTro4.chr19 59718992 132 + 63644993 gcttttttttttttttttttttcttgagacacactcttcctctgtcacccaagctggagttcagtggctcgagctcagctcaatgcaacctccgcctcccaggttcaagcagttctcgtgcct----cTGGTTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590849 127 + 60714840 gc-----tttttttttttttttcttgagacagactcttcctctgtcacccaagctggagttcagttgctcgagctcagctcactgcaacctccgcctcccaggttcaagccattctcgtgcct----cTGGTTTAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638732 126 + 59248254 ------ttttttttctttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggtacgagctcagctcactgcaacctccgcctcccagattcaagcacttcttgtgtcA----CTGGTTTAG i macFas5.chr19 T 15632 T 5933 s papAnu2.chr19 47726429 130 + 51301725 ------ttttttttttttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggcacgagctcagctcactgcaacctccgcctcccagattcaagcactTCTTGTGCCACTTTCTTGTTTAG i papAnu2.chr19 I 10 I 36072 s chlSab2.chr6 47405062 126 + 50890351 ------tttttttttttcctttcttgagacagactcttcctctgtcacccaagttggatttcagtggtacgagctcagctcactgcaacctccacctcccagattcaagcacttctcgtgccA----CTGGTTTAG i chlSab2.chr6 I 9 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e rheMac3.chr19 60531427 4380 + 64156825 T a score=17492.000000 s hg38.chr19_GL949748v2_alt 829911 37 + 1064304 TACTAGAAACTC-ATCAGGAAAATTAGAATGGCTTTTT s panTro4.chr19 59719124 38 + 63644993 TACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590976 38 + 60714840 TACTAGAAACTCAAACAGGAAAATTAGAATGGCTTTTT i ponAbe2.chr19 C 0 I 94109 s chlSab2.chr6 47405188 38 + 50890351 TACAAGAAACTCAAGTAGGAAAATTAGAATGACTTTTT i chlSab2.chr6 C 0 I 74977 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47726559 36072 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=300.000000 s hg38.chr19_GL949748v2_alt 829948 1 + 1064304 G s panTro4.chr19 59719162 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685123 1 + 60714840 G i ponAbe2.chr19 I 94109 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47405226 74977 + 50890351 I e papAnu2.chr19 47726559 36072 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=41086.000000 s hg38.chr19_GL949748v2_alt 829949 91 + 1064304 TCACAATTACTCTGATAATGTTAATAATACCTCTTAGATATTTTGCACATTACACATGAAGAAAAGTTTGAATCTCAGATAAAAAC---AAAAA s panTro4.chr19 59719163 91 + 63644993 TCACAATTACTCTGATAATGTTAATAATACCTCTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAAC---AAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685124 94 + 60714840 TCACAATTACTCTTAAAACCTTAATAATACCTATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47480203 94 + 50890351 TCACAATTGCCCTGACAACGTTCATAATACCTATTAGATATTTTGCATATTACACACGAAGAAGAGTTTGAAACACAGATAAAAACGACAAAAA i chlSab2.chr6 I 74977 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47726559 36072 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=312944.000000 s hg38.chr19_GL949748v2_alt 830040 386 + 1064304 TACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCACCTCATGTGTGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGGTCATAGTGAAGGATGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCTCCTGTCTGCACCGGCAGCACCATGTCGCTCACGGTCGTCAGCATGGCGTGCGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGAGTGGGGA s panTro4.chr19 59719254 386 + 63644993 TTCATCAAAAGTCTTTAATGAAAGCACAGAATTCAATCATCTCGTGTGTGAGAGTTTGGATCTGAGACGTCTTTTGAGTCTGGTCATAGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAAAAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685218 385 + 60714840 TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCGGGAGGTTGGATCTGAGACGTGTTTTGAGT-TGGTCATAGTGAAGGACACTAGGTGTCAATTCTAGTGACAACAATTTCCAGGAAGCCATGTTCTGCTCTTGAGCGAGCACCCACTGGGCCTCGTGCAAGGTAGAAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGTATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCACTGGGG i ponAbe2.chr19 C 0 T 54708 s papAnu2.chr19 47762631 385 + 51301725 TACATGAAAAATCTTTCACGTCAGCACAGATTTTAGTCACCTCATGTCCGGGAGGTTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCACTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCCCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCACTCATGGTCGTCAGCCTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATCGACGGAGGAAGCGCTGGgg i papAnu2.chr19 I 36072 C 0 s chlSab2.chr6 47480297 385 + 50890351 TACATGAAAAGTCTTTCACGTCAGCACAGACTTTAGTCACCTCGTGTCCGGGAGGTTGGATCTGAGATGTGTTTTGAGC-TGGTCATAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCAGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACTGGCAGCACCATGTCGCTCATGGTCGTCAGCGTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATTGGCGGAGGAAGCGCTGGGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=44546.000000 s hg38.chr19_GL949748v2_alt 830426 94 + 1064304 TGGAGATCTCGGCCTAGAGGTAAAGATATGGGCCTGGA-GTGGAGATATGGGCCTGGAGTGGAGATA-------------------TGGGCCTGGGTGTGGAGATATGGGCCTG s panTro4.chr19 59719640 93 + 63644993 TGGAGATCTCGGCCTAGAGGTAAAGATCTGGGCCTGGA-GTGGAGATATGGGTCTGATGTGGAGATA-------------------TGGGCCTGGA-GTGGAGATATGGGCCTG i panTro4.chr19 C 0 I 15885 s ponAbe2.chr19 56630895 94 + 60714840 TCGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGGAGGTGGACTGATGGGCCTGGAGTGGAGATC-------------------TAGGCCTGGA-GTGGAGATCTGGGCCTG i ponAbe2.chr19 T 54708 C 0 s papAnu2.chr19 47763016 112 + 51301725 tggagatctgggcctggagg-ggagatCTGGACCTGGAGGTTGAGttatgggcctggagtggagatatgatCCTGGAGTGTagatctgggcctgga-gtggagatctgggcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480682 54 + 50890351 TGGAGATC----------------------------------------TGGGCCTGGAGTGGGGATA-------------------TGGGCCTGGG-GTGGAGATATGGGCCTG i chlSab2.chr6 C 0 I 93 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=3249.000000 s hg38.chr19_GL949748v2_alt 830520 18 + 1064304 ------------------GAGGTGTAAATATGGGCC s panTro4.chr19 59735618 18 + 63644993 ------------------GAGGTGGATATCtgggcc i panTro4.chr19 I 15885 C 0 s ponAbe2.chr19 56630989 17 + 60714840 -------------------GAGTGGACATCTGGGCC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763128 36 + 51301725 gagtggagatatgatCGTGGAGTGCAGATATGGGtc i papAnu2.chr19 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47480736 93 + 50890351 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=7730.000000 s hg38.chr19_GL949748v2_alt 830538 8 + 1064304 TGGAGTGG s panTro4.chr19 59735636 8 + 63644993 tggagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631006 8 + 60714840 TGGAGTGG i ponAbe2.chr19 C 0 I 54612 s papAnu2.chr19 47763164 8 + 51301725 tggagtgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480829 8 + 50890351 TGGAGTGG i chlSab2.chr6 I 93 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=11463.000000 s hg38.chr19_GL949748v2_alt 830546 17 + 1064304 AGATATGGGCCTGGAGG s panTro4.chr19 59735644 17 + 63644993 aaatatgggcctaggat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685626 17 + 60714840 AGATATGGGCCTAGAGG i ponAbe2.chr19 I 54612 T 54614 s papAnu2.chr19 47763172 17 + 51301725 agatatgggcctggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480837 17 + 50890351 AGATACGGGTCTAGAGT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=1592.000000 s hg38.chr19_GL949748v2_alt 830563 18 + 1064304 GGAGATATGGGCCTGGGT-------------------------------------------------------------------- s panTro4.chr19 59735661 18 + 63644993 ggagatatgggcctgggt-------------------------------------------------------------------- i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47763189 86 + 51301725 ggagatatgggcctggaggGAAGATATGAACCTAGAGGGGAGATATGGGTTTGGAGTGGAGCCTGGAGAGCAGATTTGAGCCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480854 74 + 50890351 GGAGATATGGGCCTGGGCTGGAGATCTGGGCCTGGAGTGGAGATA------------GGATCCTGGAGTGGAGATCTGTTCCTGGA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56685643 54614 + 60714840 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=29028.000000 s hg38.chr19_GL949748v2_alt 830581 39 + 1064304 GTGGAGATATGGGCCTGGAGTGGAGATACGGGCCTGGAG s panTro4.chr19 59735679 39 + 63644993 gtggagatatgggactggagtggagatatgggcctagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631029 39 + 60714840 GTAGAGTTACGGGCCTGCAGTAGAGATATGGGCCTGGAG i ponAbe2.chr19 T 54614 I 54575 s papAnu2.chr19 47763275 39 + 51301725 GaggagatatgggcctggggtggagataGGAGCCTGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480928 39 + 50890351 GTAGAGATATGGGCCTGGAGTGGAGATATGGGTCTGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=15656.000000 s hg38.chr19_GL949748v2_alt 830620 25 + 1064304 TGGAGATATGGGCCTGG-AGTGGAGA s panTro4.chr19 59735718 25 + 63644993 tggagatatgggcttgg-ggtggaga i panTro4.chr19 C 0 I 31425 s ponAbe2.chr19 56685643 26 + 60714840 TGGAGTTATGGGCCTGGAAGTGGAGT i ponAbe2.chr19 I 54575 C 0 s papAnu2.chr19 47763314 25 + 51301725 GGGAGATATGGGTTTGG-AGCAGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480967 25 + 50890351 TGGAGACATGGGTCTGG-AGTGGAGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=142620.000000 s hg38.chr19_GL949748v2_alt 830645 231 + 1064304 -------------------TATGGGCCTGCAGGTGGAGATCTGGG--CCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGTCTGATGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTAGAGGGGAGATCTGGGCCTGGAGTGGAGATATGGGTCTGATGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGG-------------------AGTGGAGATAGGGGCCTGGAGTGGAGATA s panTro4.chr19 59767168 231 + 63644993 -------------------TATGGGCCTGGAAGTTGAGTTATGGG--CCTGAAGTGGAGATCTGGGCCTGGAGTGGAGATATGATCCTGGAGTGGAGATCTGGGCCTGGGGTGGAGTTACAGGCCTGGAGCAGAGATACAAGCCTGGAGTGGAGATATGGGCCAGGAGTGGAGATCTGGGCCTGGAGTAGAGACATCAGCCTGGAGTGGAGATATGGGCCTGG-------------------AGTGGAGATAGGGGCCTGGAGTGGAGATC i panTro4.chr19 I 31425 C 0 s ponAbe2.chr19 56685669 249 + 60714840 -------------------TATGGGCCTG-AAGTGGAGATCTGGG--CCTGGAGTGGAGATATGATCCTGGAGTGGAGATATGGGCCTGGGGTGGAGATACAGGCCTGGAGCAGAGATACAAGCCTTGAGTGGAGATATGGGCCTGGAGTTGAGAGAGGAGCCTGGAGTGGAGTTATGGGCCTGGAGTGGAGACATCAGCCTGGAGAGGAGATATGGGCCTGGAATGGAGATTCAGACCTGAAGTGGAGATCTGGGCCTAGAGCGGAGATC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763339 268 + 51301725 CATGGGCCTGGGGAGGAGATCCGGGCCTG-GAGTGGACTTA--GGAGTCTGGAGTGGAGATATGGTCCTGGGGTGGAGATAGGATCCTGCAGTGGAGATATGAGCATGGAGAGGAGATATGGGCCTGAGGTGGAGATAAGGGCatggagtggagatatgggcctgggttGGAGATAGGAGCTTGGAAAGGAGATATGGGTTTGGAGTGGAGATATGGGTCTGGAGTGCAGATAtgagcctggagtggagatatgggcctggagtTGAGATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480992 268 + 50890351 TATGGTTCTGGAGAGGAGATATGAGCCTG-GAGAGGAGATATGAG--CCTGGGGTGGAGATATGGGTCTGGAGTGCAGATATGGGCCTGGAGTGGAGATATGGGTCTGGAGAAGAGATATGAGCCTGGAGAGGAGATATGGGCCTGGGGTTGAGATATGGGTCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGTCTGGAGAGGAGATATGAGCCTGGAGAGGAGATATGGGCCTGGGGTGGAGATAGAGGCCTGGAGTGGAGATA i chlSab2.chr6 C 0 I 209 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=668410.000000 s hg38.chr19_GL949748v2_alt 830876 831 + 1064304 TGGGCCTGGAGTGGAGATCTGGGCCAGGAAGTGTTGATCTGGGCCTGGAGCCTGGGTCTCTCCACAGCTGAGAGCCCTGTTCTTGGCAGCAGGTAG-CAGGGAGGCTAAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGTGCAGTGGGGGCAGCAGGG--TGCCCTGGTTTGCCTGCAGTTGGATCGTCTATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACTCATGGGTGAGTCCGTCCCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTTCTGAAACAGGAGGGAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTTGGATACTCGGCCCACATTTCTGACCTCGCCCTCCCTGGCCTTTCTTTCCCTTTCCTGAGTCAAGCTCTGTGAAGACTGGGGTGAGACTGGGGTGCTCCAAGCTGGGGTGTGCAGGGAGGAAGTGGTGTCAGCAGCAGAGAAAGAGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTATAACTGACACCCTCCAGCGTTTCCGTGACGGTAGGGGCTGCAGTGTGGCTGCGGTCTTTCTACCAGAAGAGG-GGGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGA-GGGGGCTCAGTTCATGAATTGGCTGATATTCCATTCACATAGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACT s panTro4.chr19 59767399 834 + 63644993 TGGGCCTGTTGTGTAGATCTAGGCCTGGAGGTGGAGATCTGGGCCTGGAGGCTGGGTCTCTGCACAGCCGAGATCCTTGTTCCTGGGGGCAGGTAGGCACTGAGGATGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACGCACAGTGCAGTGGGGGCAGCAGGG--TGCCCTGGTTTGCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGTCCACACATGGGTGAGTCCTTCCCCATATCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAGTGGGAGGGAAGGCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGATGCTCGGCCCACAGTTCTGACCTCGCCCTCCCCGGCCTTTCTTTCCCTTTCCTGAGTCAAGCCCTGTGAAGACTGGGGTGAGACTGGGGTGCTCCAAGCTGGGGTGTGCAGGGAGGAAGTGGTGTCAGCAGCAGAGAAAGAGAGGGAAGCAGTACTAGGAACAGCACGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTCATGAATTGGCTGATATTCCATTCACATAGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTAATTTTGCAGTATTAAAATCTAGTAGGAGTCACTTATTCAGCACTTGCTTAAAGTTCTCAGCTGACACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685918 834 + 60714840 TGGGCCTGTTGTGTAGATCTAGGCCTGGAGGTAGAGATCTGGGCCTGGAGGCTGAGTCTCTGCACAGCTGAGATCCTTGTTCCTGGGGGCAGGTAGGCAGCGAGGGTGAGTTTAACTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGCCAAGTGGGGGCAGCAGGG--TGCCCTGGTTTGCCTGCAGATGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACATGGGTGAGTCCTTCCCCAAACCTTAGGGTATCATCTCCCCACATAAGAGGATTTTCCTGAAACTGGAGGGAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTCGGATGCTCGGCCCATAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTTCCTGATTCAAGCTCTGTGAAGACTGGGGTGACACTGGGGTGCTCCAAGCTGGGGTGTGCAGGGAGGAAGTGGTGTCAGCAGCAGAGAAAGAGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAAGACAAAGGTGTAACTCACACCCTCCAGGGTTTCTGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCACTTCATGAATTGGCTGATATTCCATTCACATAGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTCTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTTAAAGTTCTCAGCTGACACT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763607 833 + 51301725 TGGGCTTGTTGTGTAGATCTAGGCCT-GGGGTGCAGATCTGGATCAGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCTGC-GGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAG-CCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCCGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGACAGTCTCTCATAAACTAAGTAGGGGAGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGGGGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGCgactgaggaagggagggaagcagtGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGAcggtcagggctgcagtgtggCTGCTGTCACTCTAccagaagatgtggagaaaccaCAGCCATGACCCTGACATTCCAAATCTTCTGATGGGGACTCAGTTCATGCACTGGCTGATGTTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCTactttgtgttgttttatgtGAGTGATCTTGAAGCATTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481469 833 + 50890351 TGGGCCTGTTGTGTAGATCTAGGCCT--GGGTGCAGATCTGGATCCGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCTGC-GGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGAGAGTCTCTCATAAACTAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGGGGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGTGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGACGGTCAGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTCATGTTGGGGGCTCAGTTCATGCACTGGCTGATATTCCATTCACAAGGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTCATCTTGAAGTGTTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACC i chlSab2.chr6 I 209 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=434785.000000 s hg38.chr19_GL949748v2_alt 831707 460 + 1064304 T--GTTGTAGGGAGAC--GCCATGTCTAT------GTGGGGTGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCT-----------------TAGAAA-GCGGAAATGGG-AGAATCTTCTGAGCACAGGGAGGGAGGGGTGGCTCCACATCCTCCTCTCTAAGGCAGTGCCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCCTGTCTGCCCGGCCCAGCACTGTGGTGCCTCGAGGAGGACACGTGGCTCTTCAGTGTCACTATCGTCGTGGGTTTAA---------CAATTTCATGCTGTACAAAGAAGACAGAAGCCACGTTCCCATCTTCCACGGCAGAATATTCCAGGAGAGCTTCATCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--CGGGGTTCACGCCCACACTCCCTCACTGGGTGGTCGGC---ACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAG s panTro4.chr19 59768233 456 + 63644993 TTTGTTGTAGGGAGAT--GACATGTCTAT------GCGGGGTGGGTCCTTCTTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCT-----------------TAGAAA-GTGGAAATGGG-AGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGCAGTGCCTCCTTCTCCCCCAGGTGGTCACGACAAACCCTTCCTGTCTGCCTGGTCCAGTGCTGTGGTGCCTCGAGGAGGACATGTGACTCTTCGGTGTCACTATCGTGGTGGGTTTAA---------CAATTTCATGCTGTACAAAGAAGACAGAATCCACGTTCCCATC------GGCAGAATATTCCAGGAGAGCTTCAACATGAGCCCTGTGACCACAGCACATGCAGGGAACTACACATGT--CGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGC---ACCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686752 462 + 60714840 TTTGTTGTAGGGAGAT--GCCATGTCTGT------GTGGGGTGGGTCCTTCCTGTAGCCCTGGGCTCCCAGGTGTGGTAGGAGCCT-----------------TAGAAA-GTGGAAATGGG-AGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGTGGCATCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCCTGTCTGCCTGGCCCAGCGCTGTGGTGCCTCGAGGAGGACACGTGACTCTTCGGTGTCACTATCGTGGTGGGTTTAA---------CAATTTCATGCTGTACAAAGAAGACAGAATCCATGTTCCCATCTTCCAGGGCAGAATATTCCAGGAGAGCTTCAAGATGAGCCCTGTGACCCCAGCACATGCAGGGACCTACACATGT--CGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGC---ACCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764440 473 + 51301725 TTTGTTGTAGGGAGAC--GCCATGTCTAT------GTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCT-----------------TAGAAACATGGAAAGGGGAAGAATCTTCTGagcacagggagggaggggcGGCTCCACATCCTCCTCTCTAAGGTGGAACCTCCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGCTTTACAACTTTACCAACTTCACTCTGTACAAAGACGACAGAAGCCACGTTCCTGTCTTCCATGGCAGAATATTCCAGGAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCATACCCGCACTCCCCCACTGAGTGGTCGGC---ACTCAGCGACCCCCTGGCTATCAGGGTCACAGGTCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482302 473 + 50890351 TTTGTTGTAGGGAGAC--GCCATGTCTAT------GTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCT-----------------TAGAAACATGGAAAGGGGAAGAATCTTCTGAGCACAGGGAGGGAGGGGTGGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAAGCCACGTTCCCATCTTCCACAGCAGAATATTCCAGCAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGC---ACACAGTGATCCCCTGGTGATCAGGGTCACAGGTCAGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769926 481 + 49145316 --TATTCCAGGAAGACCTTCCATGTCCACTCTGGGGTGGGCCGGGTCCCTGTCCCACCACCAGGTACCCAGG-GCATCAGGGGCTTCATGTTACAGGGCAAAGCAGAACAGTGGGAAGAAG-GAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCCCCTCTCT-AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGT---------CACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCACA-CTGGCCGTTCCA--ATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAG i calJac3.chr22 T 307 I 1011 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=1008385.000000 s hg38.chr19_GL949748v2_alt 832167 1322 + 1064304 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCATCAGGGTCCCATCACCCAGGCCCCAACTGTATTTGGGGTCAAGGGAGATTGAATACAGGGGAAATGGGTGCtgtggtgggaagaataactgtcgccaatgatggctacattgtaaaccctggagcctgtgactatttatgttatagggcaggggactgaaggggaaggtggagctcaggttgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgggctcagtgtaatcacaagggtccgcgtgagaggtggaggaagaggggagtggggattagagcagtgtagtgggagggagacgctatcagccactgtgggctttgaaggtggaggaaggccactagtcacagaatg-caggtggcctctaagggctggagaagtcaagagaactgatttgctgagtctccagagggaacgcagccctgcagatgccttgatttcagcacagggagaactggatccaatttctgtccccagaagtggaaggggtcagtgtgttctctcctgctgccatgtttgtgataattttctgcagcagcaacaggaaaccgacacaGGAACCCAGGTCAAGGACAAGCTAGGAAACCAAACAAGGAtagccaggtgtggtggtgggcacgagtaatccaacgactggggaggctgaggcaagataatcacttgaaccggggaggcagaggttgcagtgagccaagacaacaccactgcactccagcctgggtgaaaaagtga----ctgtctcaaaaataaaTTAATTAATCAATTAATTAAagaaaccaaacaaggagaaggttggctaccgtgggatcagcaagggtgggatgctgatgccaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcaccagggaccaccctatggaagctggggccaTGGAGAAGGCACAGACATGGCAGGAGAGGCTCCCAATCCCCATCAGGAACAGGGTGTGTGGACACTGATGTCTGCCTTACTGATGAGTTGATACCTC-TGCCAGAGACTCCAATTTGTTCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTG-------TCCTCTTCCACCCCCACATAGACAGCAGGAAAGAGACTAGTGGGAAAGAGATACAACAGCCCAAGAGATGAGGCTCTCTTCACAGTGGGAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAAATGGAGGGACCTGCACCAGGGGATATGG s panTro4.chr19 59768689 1322 + 63644993 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCCTCAGGGTCCCATCACCCAGGCCCCATCTGTATTTGGGGTCAAGGGGGATTGAATACAGGG-AAATGGGCGCtgtggtggaaagaataactgtccccaatgatggctacattgtaatccctggagcctgtcactatttacgttatagggcaggggactgaaggggaaggtggaactcaggttgttgatgagttgaccttgagatggggagacagcctggactgtcccggtgggctcagtgtaatcacaagggtccacatgagaggaggaggaagaggggagtggggattagagcagtgtagtgggagggagacgctatcagccactgcgggctttgaaggtggaggaaggccactagtcacagaatg-caggtggcctctaagggctggagaagtcaagagaactgattcgctgattctccagagggaacgcagccctgtagacgccttgatttcagcacagggagaactggatccaatttctgtctctagaagtggaaggggtcagtgtgttctctcccgccgccatgtttgtggtaattttctgcagcagcaacaggaaaccaacacaGGAACCCAGGTCAAGGACAAGTTAGGAAACCAAACAAGGACagccaggtgtggtggtgggcacaagtaatccaatgactggggaggctgaggcaagagaatcacttgaactggggaggcagaggtttcagtgagccaagacaacaccactacactccagcctgggtgaaaaagtga----ctgtctcaaaaataaattaattaatcaattaattaaagaaaccaaacaaggagaaGGTTggctaccctgagatcagcaagggcaggatgctgatgccaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcaccaggggccaccctatggaagctggggccatggagAAGGCACACACATGGCAGGAGAGGCTCACAATCCCCATCAGGAACAGGGTGTGTGGACACTGATGTCTGTCTTACTGATGAGTTGATACCTCCTGCCAGAGACTCCAATTTGTTCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGACATGCAGCCTG-------TCCTCTTCCACCCCCACATAGACAGCAGGAAAGAGATTAGTGGGAAACAGATACAACAGCCCAAGAGATGAGGCTCTCTTCACAGTGGCAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAGATGGAGGCACCTGCACCAGGGGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56687214 1323 + 60714840 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCACAGCTTCTGGTGGGGGTGTCCGTCAGGGTCCCATCATCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGGAAATGGTCACtgtggtggaaagaataactgtccccagtgatggccacattgtaatccctggagcctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggttgttgatgagttcaccttgagatggggagatggcctggactgtcccgctgggctcagtgtaatcacaagggtccacatgagaggaggaggaagaggggagtggggattagagcagcgtagtgggagggagatgctatcaaccactgcgggctttgaagatggaggaaggccactagtcactgaatg-caggtggcctctaagggctggagaagtcaagagaactgattcgctgagtctccagagggaacgcagccctgtagacgccttgattttaatgcagggagaactggatccaatttctgtctccagaagtggaaggggtcagtgtgttctctcctgccgccatgtttgtgataattttctgcagcagcaacaggaaaccaacacaGGAACCCAGGTCAAGGACAAGTTAGGAAACCAAACAAGGAtagccgggcgtggtggtgggcgcgagtaatccaacgactggggaggctgaggcaagagaatcacttgaaccggggaggcagaggtttcagtgagccaagaccacaccactacactccagcctgggtgaaaaagtga----ctgtctcaaaCATAAATTAATTAATCAATTAATTGAagaaaccaaacaaggagaaggttggctaccctgaggtcagcaagggcaggatgctgatgccaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcactgggggccaccctatggaagctggggccacggagaaggcacagacatggcaggagaggctcccaaTCCCCATCAGGAACAGGGTGTGTTGACACTGATGTCTGCCTTACTGATGAGTTGATACCTCCTGCCAGAGACTCCTATTTGTTCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGATGTGCAGCCTG-------TCCTCTTCCACCCCCACATAGACAGCAGGAAAGAGATTAATGGGAAACAGATACAACAGCCCAAGAGATGAGGCTTTCTTCACAGTGGGAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAGATGGAGGGACCTGCACCAGGGGATATGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764913 1303 + 51301725 GGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTACAGGGGGATTGAATACAGGG-AAATGGGTGCTGTGATGGGAGGAATAACTGTCCCCAGTTATGGCTACATGGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCAGGGGACTGAAGGGGAAGATGGAGCTCAGGTTGTTG-TGAGTtgaccttgagatggggagatggcCTGGACTGTCCCAGGGGgctcagtgtaatcacaaggcAACAaacaagaggaggaggatgaggagagtGGGGATTAGAGCAGCGTCGT----GGGAGATTCTATCAGCCACTGTGGGctttgaaggaggaggaaggccaCAAGCCAC--AATGGCAGGTGGCCTCTACGGGCTGGAGAAGTCAAGAGAACCGCTCTGCTGAGTATCCAGAGGGAACACAGTTCTGTAGACGCCTTGATTTCAGCCCAGGGAGAACTGGATCCAATTTCTGTCTCcagaagtgcaaggggtcagtgtgttctctcctgctgccatattTGTGATAATTTTCTGCTGCAGCAACAagaaaccaacacaggaacat-gGTCAAGGACAAGTTAGGAAACCAAACaacaatagctgggcatggtggtgggcacgaGTAAACCAACGACTGG-------------ATtcaatctcttgaatccgggag---gaagttgcagtgagccaagaccacaccactacactccagcctgggtgaaaaagtca-actctgtgtcaaaaattaaataattaatcaattaattaaagaaaCCAAACAAGGAGAAGGTTGGCAACCCCGAGATCAGGAAGGGCGGGACGCTGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTCGATGCTCCTCGAACCAGCACCAGGAGCCACCCTGTGGAAGCTGAGGCCATGGAGAAGGCACAGGCGTGGCAGGAAAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATTCCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAACCGGGACATGGAGCCTGCCGTAGTTCCTCTTCCAGCCCCACATAGACAGCAGGAAAGAGATGAGTGGGAAACAGATACAGCAGCCTAAGAGATGAGGCTG--AGCCCAGTGGGAAGGGCGTCCGAGGCTACTAGAGACAGAAGgacagagaagagggagggacaCAGATGGAGGGACCTacacaaggggat---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482775 1297 + 50890351 GGCTCCTGTCTGGGCTTCTCCTTGTCCCAACTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTTAATACAGGG-AAATGGGTGCtgtgattagaagaataactgtccccaa-tatggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaagagggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaaacga---gaggaggatgacaagagtggggattagagcagcgtcgt----gggagagtccatcagccactgtgggctttgaaggtggaggaa-gccacgagccac--aatgaaaggtggcctctacgggctggagaagtcaagagaattgctccgctgagtctccagagggaacacagttctgtagacgccttgattttagcccagggagaactggatccaatttctgcctctaaaagtggaaggggtcactgtattctctcctggcaccatgtttctgataattttctgccacagcaacaggaaaccaagacaGGAACAT-GGTCAAGGACAAGTtaagaaacca---aacgatagccgggcatggtggtgggcacgagtaaaccaatgactgg-------------attcaatcgcttgaatccgggaggcagaaattgcagtgagccaagaccacaccactatactccagcctgggtgaaaaagtgacactctgtctcaaaaaTCaattaattaatcaatgaattaaagaaaccaaacaaggagaaggttggcaaccccgagatcaggaagggctagacgttgatgccaccaccaggctccatccacatagggaggggtcgatgctcctagaaccagcaccaggagccaccctgtggaagctgaggccatggagAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTCCATACCTCCTGCCAGGGACTCTAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGAAATGCAGCCTGCCGTGGTTCCTCTTCCAGCCCCACACAGACAGCAGGAAACAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTG--AGCCCAGTGGGAAGGGCATCCGAGGCTACTAGAGACAGACGGACA---AAGAGGGAGGGACACAGATGAAGGGAACTGCACCAGGGGAT---- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770407 1011 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=113421.000000 s hg38.chr19_GL949748v2_alt 833489 142 + 1064304 GCACAGAAAAGACACGgagacacagagagggaggagagagacagaCCTCTG------GGAGGGGAACCCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCTCTTTCTAGGAAACCA s panTro4.chr19 59770011 141 + 63644993 GCACAGAAAAGACATGGAGATGCAGAGAGGGAGGAGAGAGACAGACA-CGG------GGAGGGGAACCCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCTCTTTCTAGGAAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688537 142 + 60714840 GCACAGAAAAGACACGGAGATGCAGAGAGGGAGGAGAGAGACAGACGCCGG------GGAGGGGAACCCTCACTCATTCCGGGTGCCGTGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCACTTTCTAGGAAACCA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766216 136 + 51301725 ------aaaagacagggagacacagagagggagtacagagacagacagcgg------ggaggggAACCCTCACTCGTTCCAGGTGCCATGGATATGATGACAAAGGGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484072 136 + 50890351 ------AAAagacagggagacacagagagggaggagagagacagagagCCG------GGAGGGGAACCCTCACTCATTCCAGGTGCCATGGATATGATGACAAAGGGAGACGTCTTCTAAACTCACAACTTCTCTTTCTAGGAGTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3387407 140 - 49145316 GCAGAGAGAACACAC----ACACAGACAGGAAGGTCGTGGACGGGCTTTGGTGGTGATGAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCGTT i calJac3.chr22 T 1795 n 1011 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=109021.000000 s hg38.chr19_GL949748v2_alt 833631 115 + 1064304 CAGAAAACCTTCCCTCCTGGCCCACCCAGGGCCCCTGCTGAAATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCTTTCTGCACAGAGAGGGG s panTro4.chr19 59770152 115 + 63644993 CAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAGATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCTTTCTGCACAGAGAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688679 115 + 60714840 CAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCGTGGTGAAATCAGGAGAGAGAGTCATCCTACAATGTTGGTCAGATATAATGTTTGAGCACTTCTTTCTGCAAACAGAGGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766352 115 + 51301725 CAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTCCTCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484208 115 + 50890351 CAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTCGTCAGATATCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771418 115 + 49145316 CACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGG i calJac3.chr22 I 1011 I 56 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=32632.000000 s hg38.chr19_GL949748v2_alt 833746 50 + 1064304 ATCTCTGAGGACCCCTCACGCCTCGTTGGACAGATCCATGATGGGGTCTC s panTro4.chr19 59770267 50 + 63644993 ATCTCTCAGGACCCCTCACGCCTCGTTGGACAGATCCATGATGGGGTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688794 50 + 60714840 ATCTCTAAGGACCCCTTATGCCTCGTTGGACAGATCCATGATGGGGTCTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766467 50 + 51301725 AACTTTGAGAAGCCCCTGCACCTTGTTGGAGAGCTCCATGGTGGAGGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484323 50 + 50890351 AACTTTGAGAAGCCCTTGCACCTTGTTGGAGAGCTCCATGGTGGGGGTTC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45771533 56 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=156911.000000 s hg38.chr19_GL949748v2_alt 833796 153 + 1064304 CAAGGCCAACTTCTCCATCGGTCCCTTGATGCCTGTCCTTGCAGGAACCTACAGATGTTATGGTTCTGTTCCTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCAGA-CATTCTTCTC s panTro4.chr19 59770317 153 + 63644993 CAAGGCCAATTTCTCCATCGGTCCCATGATGCTTGCCCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACACCCCCTATCAGTTGTCAGCTCCCAGTGATCCCCTGGACATCATGGTCACAGGTGAGGGTGTCTAGA-CATTGTTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688844 153 + 60714840 CAAGGCCAACTTCTCCATCGGTCCCATGACACCTGCCCTTGCAGGGACCTACAGATGCTACGGTTCTATTCCTCATTCCCCCTATGAGTGGTCAGCTTCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCAGA-CATTCTTCTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766517 153 + 51301725 CCAGGCCAACTACTCCATCAATTCCATGACGTCTGCCCTTTCAGGGACCTACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATGGTGATCACAGGTGAGAGTGTCCGGa-cattcttctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484373 153 + 50890351 CCAGGCCAACTATTCCATCAATTCCACGACGTCTGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTCACTCAATCCCACTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCGGA-CATTCTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771589 154 + 49145316 CAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGACCATCCTGCTC i calJac3.chr22 I 56 I 617 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=493211.000000 s hg38.chr19_GL949748v2_alt 833949 607 + 1064304 ATTGTCATTGGGACACAGAGTGAATGATCCAGGACTTGGAACCCCCAGGTGGTCATGAGGAAGATAAGCGTGGGATTCTTATGGAGAGAGACTGACTCGGTGAGGTCTGTACCAACAGAGACAGGGAAACAGGAGACATAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACGGGGAAGTAGAAAAGAGAGAAAGAGGTAAAGGAGACACTCAGACAGACAGACATGTGCCAGAGAGAAGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTGTCTCCACAAAGTGCT-TCTACGAGGAGAACCCA-----AGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCATCTACAGATGCCATGTTTATTCTGACACCTCTGCCTTCCATGCAGTGGAGCCATAATTATCCCAGGATATCATGGCCCCAGAACACCAACCCCTAAATACTGTGTGTACTTGGTGTCCCCAGACTAGATTCTGAGGCTCATATTCCAAATAATCCTACATATAATAGGATCACTGAGAGACACAGAGATAAATCAGGGACTTC s panTro4.chr19 59770470 606 + 63644993 ATTGTCACTGGGACACAGAGTGAATGATCCAGGACTTGGAACCCCCAGGTGGTCATGAGGAAGATAAGTGTGGGATTCTTATGGAAAGAGAGTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACATAAGTACAGAACAGGTGTCATAACAGGGGACAGACACAGGGGCCATACAGGGAGGTAGAAAAGAGAGAAAGAGGTAAAGGAGACACTCAGACAGACAGACATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTT-TCTACCAGAAGAAACCA-----AGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGCCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCGTCTCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAATCCCACATATGATAGGATCGCTGAGAGACACAGAGAAAAATCAGGGACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688997 607 + 60714840 ATTGTCACTGGGATACAGAGTGAATGATCCAGGACTTGGAACCCCCAGGTGGTCATGAGGAAGATGAGCGTGGGATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACATAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGGTAGAAAACAGAGAAAGAGGTAAAGGAGA----CAGACAGACAGACATGTCCCAGAGAGAGCTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAGAGTGTTCTCTACTAGGAGAACCCAAACCCAGGACACCTGTATTTCTGACCTGAGTCGGTCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCTGTGTTTA-TCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCATCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTGGATTCTGAGGCTCATATTCCAAATAACCCCACATATGATAGGATTACTGAGAGACACAGAGAGAAATCAGGGACGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766670 606 + 51301725 attgtcacCGGGACACAGAGTGAATGATCCAGGACTTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGAATCTTATGGAGAGAGACTCACTTGGGGAGGTCTGTAccaacagagacagagaaacagaatacACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAAGgaggtagaaaagagagaaagagttaaagGGGACACCCAGACACACAGACATGTCCCAGAGAGAGGCGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGaagtttcatttctgttttacctCCACAAAGTGTT-TCTACCAGGAGAACCCA-----AGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGACCTTGTGGCACCTACAGATGCCATGTTTGTTCTGACACCTCTGCCTTCCGTGCAGTGGAG-AGTCATCGTCCCAGGATATCGTGGCCCCAGAACACCAACCCCTGTATGCTGTGTGTACTTGGGGTCGCCACACTGGATTCTGAGGCTCATATTCCACAGAATCCCACATATGATAGGATTCCTGAGAGACGCAGAGAGAAATCAGGAacatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484526 606 + 50890351 ATTGTCACTGGGACACAGAGTGAATGATCCAGTACCTGGAAGCCCCAGGTTGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAATAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGGTAGAAAAGAGAGAAAGAGTTAAAGGGGACACCCAGACAGACAGACATGTCCCAGAGACAGTCGTCCTTCTGTGCTGACTTTGCTCAGAGACTCGGCACAGGTTAGAAACTTCATTTCTGTGTTACCTCCACAAAGCGTT-TCTACCAGAAGAACCCA-----AGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTTGTTCTGACACCTCTGCCTTCCGTACAGTGGAG-AGTCATCGTCCAAGGATATCGTGGCCCCAGAATACCAACCCCTGTATGCTGTGTGTACTTGGGGTTCCCAGACTGGATTCTGAGGCTAATATTCCACAGAACCCCACATATGACAGGATTCCTGAGAGACACAGAGAGAAATCAGGAACATC i chlSab2.chr6 C 0 I 315 e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=669801.000000 s hg38.chr19_GL949748v2_alt 834556 918 + 1064304 AAAAAGCAAAGGCATAAACACACAGAG-AATGAGCCAGAGGAAGGGGATTGAGAGACTCACAGACACACAAAAAGAAAGAAAAGAGGGCAGAGGAGTGGAGAGAATGCTGGAAGGGAGGAGAGAAAAGCCCCAAAATCAGAACCCTGAGGGAG--GGGCACAAAGACAGAGAAAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAATAGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagagagacagatgatagatggatagatagatatagatagatgataaataggtagatgatagataatggataggttatagatacatagatgatgattga----tagatgatacatagagatgatgat---------------------gatgatgatgaagatagataga-------------agacacatatataaatatatagatacatagatgatac----atagagactgacaggcagacagag----aggtaatagagagagagag--agatgatac------atagatacagataatacatagatgattgatggatagacagatagacaatt--------gatagataaatgatac--atagatatagatgac----agataatttgtagatagacacaaaatagata------------gatagat----------------aatagatagaAATATGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAGAATTATAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAGCATACCCAGGGGTGGGGAAGTGAGGTCagagacctagagagacagagaaggcggaaggaggaaatagacatgaagagagttggggtggagggt--gagagagagagagagCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTATGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG s panTro4.chr19 59771076 925 + 63644993 AAAAAGCAAAGACATAAACACACACAA-AATGAGCCAGAAGAAGGAGATTAAGAGATTCACAGACACATAAAAAGAAAGAAAAGAGGGCA---GAGTGGAGAGAATGATGGAAGGGAGGAGAGAAAAGCCCCAAAATCAGAACCCTGAGGGAG--GGACACAAAGACAGAGAAAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAATAGAACTAGAGAGACCGAGAGGCAGAGAAAGACAAGGAGATGGagagagagagatgatagatggatagatagatgtagatagatgataaataggtagatgatagataatggattggttatagatacatagatgatgactga----tagatgatacatagagatgatgat---------------------gatgacgatgatgat-gat----------------agacacatagatatatacagagatg-atacataa-------atagaGACAGAGAGGCAGACAGAG----AGGTAATAGagagagagagacagatgatac------at--atatagata----atagatgattgatggatagacagacagacaattgatagagagatagataagtgatac--ataaatatagatgat----agataatttgtagatagacacaaaatagataaatagatagatcgatagat----------------aatagatagaAATGTGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAAAATTAAAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGGGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATACCTCAGGGTGGGGAAGTGAGGTCATAGACCTagagagacagaaaaggtagaaggaggaaatagatatgaagagagatggggtggagggtgagagagagagagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGGAGTTGTGACAAGGAAGAACCTCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56689604 953 + 60714840 AAAAAGCAAAGGCATAAACACACAGAG-AATGAGCCAGAAGAAGGGGATTGAGAGACTCACAGACATATAacaggaaagaaaagagggcagaggaatggagagaatgatggaagggaggagagaaaagctccaaaatcagaaccctgagggag--gggcacaaagacagagaaagataaagatgtggggatggatTGCAGAGATTCCAAATagaatgagagagactgagaggcagagaaagacaaggagatggagagagacagaTgatatatggatagatagatatagatagatgataaataggtagatgatagataatggataggttatagatacatggatgatgattga----tagatcatacatagagatgatgat---------------------gatgatgaa-------gataga-------------agacacacagataaatatatagatacatagatgatacatagatagagacagagaggcagacagat----aggtaatagagagagagat--agatgatac------agagatgtagataacacatagatgattgatggatggacagatagacaattgatagagagatagataaatgatacatatatatatagatgacagatagataatttgtagatagacacaaaatagatagatagatagatagatagatagatagatagagagacaatagatagaAACATGCAGAAATTTATGAACAAGACAAAAAGTGAGAGACTCAGAATTGTAGAAAAAGGAAGATCAAGTCAACCAACCCAAGGAGGGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATACCTAGGGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGGGGTGGAGGGT------GAGAGAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTTTCAGTTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47767276 977 + 51301725 agaaagcaaagaaataaacacacacagaaatgagCCAGAGTAAGGGGACTGAGAGACTCACAGAcacataaagagagagaaaaaagggcagaggagtggagagaatgatggaagggaggagagaaaagctCCAAAATCAGAACCCTGAGGGCG--GGGCACAAAGACAGAGATAGATAAAGATGTGAGGATGGATTGCagagattccaaatagaactagagagactgagaggcagagaaagacaaggagatggagagagacagatggtagatggatagatagatatagatagatgataaataggtagatgatagataatggatgggttatacatacatagatggtgactgataggtagatgatacatagagatgatgatagatagatagatagatagatagatagatagatagatagatagatagatagacagatagacacatagatagata-acagatacgtagatgatac----atagagacagagagggagacagatagagagggaacagac----------agatgatacatagatatagatatagataatagatagatggtggatagatagagagacagac----gatagagagacagataaatgacac--agagatacagattacagatagataattgatagactgacaggtagtagatagatagatcgatcgatagat----------------aatggatagaAATGTGCAGAAGGTTATGAACAAGACAGAAAGTGAGAAActcagaattaaagaaaaaggaagatcaaGTCAA-CAATCCAAGGAGggtcagagagaagaaaacaataaaaaaagggaaaacacacCTCAGGCTGGGGAAGTGAGGTCAGAGAcctagagagacagagaaggtggaaggaggaaacagacatgaagagagacggggtggagggt--gagagacagagagagcattaggtcatagatcagaggagtgagTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47485447 941 + 50890351 aaaaagcaaaGACATAAACACACAGAGAAATGAGCCAGAGGAAGGGGACT--GAGACTCACAGACACATAA----AGAGAAAAGAGGGCAGGGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATCAGAACCCTGAGGGCGCAGGGCACAAAGACAGAGATAGATAAAGCTGTGGGGATGGATTGCAGAGATTCCAAATAGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagagagacagatggtagatggatagatagatagagatagatgataaataggtagatgatagataatggatgggttatagatacatagatggcaattgatagatagatgatacatagagatgattat---------------------gactgatagatagatagatcaatagatagatagatagacacatggataggtacatagatacgtagatgacac----atagagacagagaggcagacagat----agggaatagac----------agatgatac------acagatatagataatagatagatggtggatagatagagagacagacaattgatagagagatagatacatgatac--atagatatagattacagatagataattgatagattgacaggtagtagatagatcgatcaatcgatagat----------------aatagatagaAATGTGCAGAAGGTTATGAACAAAACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAATCCAAGGAGGGTCAGAGAGAAGAAAACAATACAAAAAGGGAAAACACACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTAGAGACACagagaaagtggaaggaggaaacagacaagaagagagaCGGGGTGGAGGGT--G------ACAGAGAGCATTAGACCATAGAGCAGGGCAGGGAGTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTAAGG i chlSab2.chr6 I 315 C 0 e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=311366.000000 s hg38.chr19_GL949748v2_alt 835474 325 + 1064304 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGTAGCTCCTGGAGCTCCTATGACATCTACCATCTGTCCAGGGAAGGGGAGGCCCATGAACGTAGGCTCCGTGCAGTGCCCAAGGTCAACAGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGCCCTGCCCTGCGTGTGGTCAAACTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAA s panTro4.chr19 59772001 325 + 63644993 AAACTGCGTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACAGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGATCCTATGACATGTACCATCTATTCAGGGAGGGGGAGGCCCATGAATGTAGGCTCCGTGCAGTGCGCAAGGTCAACAGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CCCACAGAGGGACCTACAGATGCTTCGGCTCTTTCCGTCACTCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690557 325 + 60714840 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCTGGCCCCACAGTCCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGCGCTCCTTTTACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGAATATAGGCTCCCTGCAGTGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCCTGAACCTCCCTACATGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47768253 325 + 51301725 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCATGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAACTTGTTTGACGTGTACCATCTATCCACGGAGGGGGAGGCTCGTGAACTTAGTCTCTCTGCAGTGCCAAGCGTCAATGGAACATTGCAGGCCACCTTCCCTCTGGGCCCTGCCA------CCCATGGAGGAACCTACAGATGCTTTGGTTCTTTCCGTACCACACCCTACAAGTGGTCAAACTCGAGTGACCCTCTGGCTGTTTCggtcacaggtgaggaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486388 325 + 50890351 AAACTGCCTCTTCTCCTTCCAGGTATATATAAGAAACCTTCTATCTCAGCCCAGCCAGGCCCCACGGTGCAAGCAGGAGAGAACCTAACCTTGTCCTGCAGCTCCCAACGCCGCTTTGACATGTACCATCTATCCAGGGAGGGGGAGACCCATGAACTTAGGCTTCCTGCAGTGCCAAACATCAATGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGTGA------CCCACGGAGGAACCTACAGATGCTTCGGTTCTTTCCATACCACACCCTACCAGTGGTCAGTCCCAAGTGACCCACTGCATGTTTCTGTCACAGGTGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 329 + 49145316 AATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGA-- i calJac3.chr22 I 617 C 0 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60531427 4380 + 64156825 T a score=49234.000000 s hg38.chr19_GL949748v2_alt 835799 39 + 1064304 ACCCGTGTCTGTCCCATGTCTTAT---------GATCCTAGAGCCATA s panTro4.chr19 59772326 39 + 63644993 GCCCATATCTCTCTCATGTGCTAT---------GATCCTAAATCCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690882 39 + 60714840 ACCTGTGTCTGTCCCATGTCTTAT---------GATCCTAGAGCCATA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527047 39 + 64156825 GCCCATGTCTGTCCCATGTCTTAT---------GACCCTAGAGccata i rheMac3.chr19 T 4380 I 159 s papAnu2.chr19 47768578 39 + 51301725 ccccATGCCTGTCCCATGTCTTAT---------GATCCCAGAGCCATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486713 39 + 50890351 CTCCATGCCTGTCCCATGTCTTAT---------GATCCCAGAGCCATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772689 48 + 49145316 GCCCACACCTGCCACCTGTCCTGTTGTCCACTAAGTCCCAGAGCCATA i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T a score=269185.000000 s hg38.chr19_GL949748v2_alt 835838 309 + 1064304 GCTGAGGAGCTTCCTGCCGA------------------------TGATGGGGAGAAGCATGGACAGATGCAGAGA-GAACACGAAGACTGGGTGTGAGGGGGGGGTCAGGGTGCAGGATGGCAGACAGGGCACCTCCAAACCCTCTTGCATGGCCTGCATGGAGGCCCATGGTCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGACAGACCCAGA-GAAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACACAGAGAGATGTC s panTro4.chr19 59772365 309 + 63644993 GCTAAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGCAGAGA-GAAGACGCAGCATGGGTGTGAGGGCGGGGTCAGGGTACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTTCATGGCCTGCATGGAGGCCTCCGATCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCAGTCAGGACAGACCCAAA-GAAGGGGAGACTGGGCTTAGTTTGGGGAGATCAGAGCTTCCCTCAGCCCCTCAATCTTACCCA-TTTCCCAGAAGCCCATCATGGCCTCTCACCCACACAGAGAGATATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690921 307 + 60714840 GCTGAGGAACTTCCTGCTGA------------------------TGATGGATAGAAGGATAAACAGATGCAGAGA-GAACACGAAGCCTGGGTGTGAGGGCGGGGTCAGGGCGCACGATGGCAGACAGGGCAACTCCAAACCCTCCTGCACGGCCTGCATGGAGGCCCATGGTCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCAGTCAGGACAGACCCAGA-GGAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCCTCCTGGACTCTCATCCACAC--AGAGATGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47768617 304 + 51301725 GCTGAGGAACTTGCTGCTGA------------------------TGATAGAAAGAAGCACGGACAGGTTCAGAGA-GAAGACCAAGCTTCGGTGTGAGGGCGGGATCAGGATGCAGCATGGC--AGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCCGCGGTCAGCGCTGCAGGCACCCaggcagatggagaaactggTCAGGACAGACCCAGA-GGA-GGCAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACAC--AGACATATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486752 306 + 50890351 GCTGAGGAACTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGGTTCAGAGA-GAAGACCAAGCTTCGGTGTGAGGGCGGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCCGCAGTCAGGGCTCCAGGCACCCAGGCAGATGGAGAAACTGGTCAGGACAGACCCAGA-GGA-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGATTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAACCCATCCCGGCCTCTCACCCACAC--AGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772737 293 + 49145316 CCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC----------CTCC-----------TACATGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCA-CCACAG--AGAGATTTC i calJac3.chr22 C 0 I 96928 e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=75404.000000 s hg38.chr19_GL949748v2_alt 836147 96 + 1064304 ATCACCAGCAACCCCTACACTCTTTTCTTTTCATTTTCAAAAATAtttattgaggttaaatgtaactatataatttaccaactttaccatttttaa s panTro4.chr19 59772674 96 + 63644993 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTTCAAAAATAtttattgaggttaaatgtaactatataatttaccacctttaccatttttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56691228 96 + 60714840 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTGAAAAAATATTTATTGAAGTTAAATATACCTATATAATTTACCAACTTTACCATTTTTAA i ponAbe2.chr19 C 0 T 96752 s papAnu2.chr19 47768921 96 + 51301725 ATCACCAGCAATCCTTAcacccttttcttttcatttgaaaaaatatttgttaaggtTAAATATACCTATAAAATTGACCATCTTTACCGTTTTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47487058 96 + 50890351 ATCACCAGCAACCCTTACACCCTTTGCTTTTCATTTGAAAAAATATTTGttgaggttaaaaatacctataaaattgaccacctttaccatttttaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=26293.000000 s hg38.chr19_GL949748v2_alt 836243 34 + 1064304 aagtaaaatctagtggtcataaatacctttataT s panTro4.chr19 59772770 34 + 63644993 aagtaaaatctagtggtcataaatacctttataT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594572 34 + 60714840 aagtaaaatctagtggtcataaatacctttataT i ponAbe2.chr19 T 96752 C 0 s papAnu2.chr19 47769017 34 + 51301725 GTGTAAAGACTAGTGGtcataaatacattcatat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47487154 34 + 50890351 gtgtaaagtctagtggtcataaatacatttatat i chlSab2.chr6 C 0 N 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=2566.000000 s hg38.chr19_GL949748v2_alt 836277 4 + 1064304 gctg s panTro4.chr19 59772804 4 + 63644993 gctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594606 4 + 60714840 gctg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47769051 4 + 51301725 tctg i papAnu2.chr19 C 0 T 70509 s chlSab2.chr6 47379283 4 + 50890351 gccg i chlSab2.chr6 N 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=207908.000000 s hg38.chr19_GL949748v2_alt 836281 305 + 1064304 ggtgtggtggttcacggttgtaatcttggcgctttgagaggccaagaaaggtggatcatttaagatcagggactcgagatcagcctggccaacatgcgggaaattcatctttactaaacagacaa--------------------------gaaaaattagccaagcatgccggcatgcacctgtagtcctagctacttgggaggctgaggcaggagaagcacttaaagccaggaggcagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtttctaaataaataaaTACAT---CTATATTC---------- s panTro4.chr19 59772808 305 + 63644993 ggtgtggtggttcacggttgtaatctccgcactttgagaggccaaggaaggtggatcatttaagatcaggaactcgagatcaccctggccaacatgtgggaaattcatctttactaaacagacaa--------------------------gaaaaattagccaagcatgccggcatgcacctgtagtcctagctacttgggaggctgaggcaggagaagcacttaaacccaggaggcagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtttctaaataaataaaTACAT---CTATATtc---------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594610 305 + 60714840 ggtgcagtggctcatggttttaatcttggcgctttgagaggccaaggaaggcggatcatttaagatcaggggctcaagatcagcctggccaacatgtgggaaattcatctttactaaacagacaa--------------------------gaaaaattggccaggcatgctggcctgcacctgtagtcctagctacatgggaggttgaggcaggagaagcacttaagcccaggagacagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtctctaaataaataaaTACAT---CTATATTC---------- i ponAbe2.chr19 C 0 I 42218 s papAnu2.chr19 47698546 326 + 51301725 ggcacagtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaa------------------aataataataataattagccgagcatggtggcacatgcctgtagtcccagctacttggaagggttAGGCAGGAGATGCACTTAGTtgcaggaggcacaggttgcagtgagccaagatcatgccactgcactgcagcctgggagacagagagagacactctctcaaaattaattaattaattaattaggttttttttgttgt i papAnu2.chr19 T 70509 C 0 s chlSab2.chr6 47379287 324 + 50890351 ggcactgtgactcacggttgtaatcccaacactttgagaggctaaggcaggtggatcttttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaaaataataataataataataataataataataattagccgagcgtggtggcacatgcctgtagtctcagctacttggaagggttaggcaggagatgcacttagttgcaggaggcagaggttgcagtgagccaagatcatgccactgcactagagcctgggagacagagagagacactctctcaaaaTTAATTAATTAGT--------------------A i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=285980.000000 s hg38.chr19_GL949748v2_alt 836586 359 + 1064304 TTTTTTTTGttaccttccacccttcccttcctggcctctggtatccaccattctattctctaccttcatgagatccaccttttatctcctgcatgt-ggtgagaaatgggaatctttgtaatgacctccagttccatccatgtggctgcaaatgacaggatgttattgtttctatggatgagtagtctccaccgtgtgtgtgtactacagt-tctctatccattcacccactgataggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatatgagtgcagatatcacttcgatacactgatgtcctttcctttggatataaacccagtagtgaaattgct s panTro4.chr19 59773113 360 + 63644993 ttttttttgttaccctccacccttcccttcctggcctctggtatccaccattctattctctaccttcatgagatccaccttttatctcctgcatgtgggtgagaaatgggaatctttgtaatgacctccagttccatccatgtggctgcaaatgacaggatgttattgtttctatggatgagtagtctccaccgtgtgtgtgtaccacagt-tctctatccactcacccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatatgagtgcagatatcacttcaatacactgatgtcctttcctttggatataaacccagtagtgaaattgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637133 360 + 60714840 tttttttttttAccctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctatccattcacccactgatgggcaggtaagttgactccacatcttggctacggtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgct i ponAbe2.chr19 I 42218 C 0 s papAnu2.chr19 47698872 360 + 51301725 tttttttttttaccctccacccttcccttcctgggctctggtagccaccattctactctctactttcaTGAGATCCACCTTTTAGCTCCTGCATATGagtaagaaatggaaataattgtaatgacctccagttccatccatgtggctgcaaatgTCAGGATGTT-TTGTTTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGACTCCacatcttggctactgtgaactgTGCTAGAACAGTCATGGGAGTGCAGCTATCACTTCGATACACTGAAGTCCTTTCCTTTTGGTTTACACCCAGTCGTAGAATTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379611 361 + 50890351 TTCTTTTTTTTAccctccacgcttcccttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgcatatgagtgagaaatggaaatacttgtaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatggatgagtagtctccactgtgtgtatgtactacattctctctatccagtcatccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctagaacaatcatgggagtgcagatgtcacttcaatacactgaagtcctttccttttggtttacacccagtcgtggaattgct i chlSab2.chr6 C 0 N 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=143332.000000 s hg38.chr19_GL949748v2_alt 836945 404 + 1064304 ggacactatgaaagtt-----------ctc----tttttttttttttcttttttgagaaagagtttccctcct-tagtccaagctggagtcaaagtggtgcgatcttggctcattgcaacctctgcttcctaggttcaaacgattctcctgactcagcctccctaatagctgtgattacaggtgcacgccaccatgcctgactaattcttgtattttttagcacagacgggatatcccaattttgggcaggctgctctcaaactcctgacctcaagtgaggtgcctgcctcggtttcccaaagtgctgaagttacaggcataagccactatgcccagcctccttttagttttttaaagattttccatacttttctcc---ataatagttgtactaatttacattcctaccaacagggtaccag s panTro4.chr19 59773473 406 + 63644993 ggatactatgaaagtt-----------ctc--tttttttttttttttcttttttgagaaagagtttccctcct-tagtccaagctggagtcaaagtggtgcgaccttggctcattgcaacctctgcctcctgggttcaaatgattgtcctgactcagcctccctagtagctgtgattacaggtgcacgccaccatgcctggctaatttttgtattttttagcactgacgggatttcccaattttggccaggctgctctcaaactcctgacctcaagtgaggtgcctgcctcggtttcccaaagtgctgaaattacaggcataagccactatgcctatcctctttttagttttttaaagaatttccataattttctcc---ataatagttgtacaaatatacactcctaccaacagggtaccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637493 407 + 60714840 ggatactatgaaagtt-----------tttcgtttgttgtttttgtttttgtttttgagacactttccctctg-t-gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccttagtagcagggattacaggtgcacacccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttttctcc---gtaatggctgtactaatttacactcctaccaacagggtaccag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47699232 414 + 51301725 AGATCCTGTGCAAGTTGACtttttacgttttgttttatggtttttgtttttttttagacagagtttcattcttgttgcccaggctggagtgc-cgtggtgccatctgggctcactgcaacttgcacCTCCGGGATTCAAGAGATTccctagcctcagcctcccaagtagctgagattactggctcccaccaccacactcagctaat-------atttttagtagagacggggtttctctatattggccaggctgctcttcaactcttgacctcaagtgatctacccacctcggcctcccaatgtgctgggattacaggcatgaaccaccgtgcccaacctcgtttta-ttttttgaggaacttccatactctTCTCCTCtgtaatggctgtattaatttacattcataTCAACAGTGTACCAG i papAnu2.chr19 C 0 I 49279 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=29190.000000 s hg38.chr19_GL949748v2_alt 837349 66 + 1064304 ggttctcctttctctaccatcttgccagcatttgttttgcctgtcttgcagataaaagccatttta s panTro4.chr19 59773879 66 + 63644993 cgttctcctttctctaccatcttgccagcacttgttttgcctgtcttgcagataaaagccatttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637900 66 + 60714840 ggttctcctttctctacccccttgccagcatttcttttgcctgtcttgcagctaaaagccatttta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47748925 66 + 51301725 GGTTCTCGTTTCTCCACCACCTTGTCAgtattttttttgtctgtctttgaaATAAAAGCCATTGTA i papAnu2.chr19 I 49279 I 20744 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=24296.000000 s hg38.chr19_GL949748v2_alt 837415 124 + 1064304 ctttacttta------ttta-----------tttattt--atttatgttgagatggagtttcactcatagtcgcccaggctggagtgcaagggtgtgatctcggctcactgcaacctctgcctcccgcgttcaactgattctc s panTro4.chr19 59773945 130 + 63644993 ttttactttattttatttta-----------tttattt--atttatgttgagatgaagtttcgctcatactcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctccgcctcccgcgttcaagtgattctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637966 142 + 60714840 ttttattttattttattttattttattttattttattttattttattttgagatggagtttcgctc-ttgtcacctaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccaggttccagtgattctc i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47748991 20744 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=26944.000000 s hg38.chr19_GL949748v2_alt 837539 71 + 1064304 ctgcctcagcctccaaagtagctgggattacaggcatgtgccaccacgcctagctaatttttgtatgttta s panTro4.chr19 59774075 71 + 63644993 ctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgcccggctaatttttgtatgtttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638108 71 + 60714840 ctgccccagcctcccgagtagctgggattacaggcacatgcaaccacgcccggctaatttttctatttttg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47769735 71 + 51301725 CCGCCTCGCTCTccgaaactgctgggattacaggcatgagccaccatgcccagcctctttttagtttctta i papAnu2.chr19 I 20744 I 118 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=22097.000000 s hg38.chr19_GL949748v2_alt 837610 107 + 1064304 gtagagagggagtttctccatgttggtcaggctggt------ctcccgacctcaggtgatccgcccacctccgcctcccaaagtgctggaattacaggcgtgagccac------cggcc s panTro4.chr19 59774146 107 + 63644993 gtagagacgtagtttctccatgttggtgaggctggt------ctcccgacctcaggtgatccgcccacctccgcctcccaaagtgctggaattacaggcgtgagccac------cggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638179 119 + 60714840 gtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagattcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcc i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47769806 118 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60527086 159 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 837717 1 + 1064304 t s panTro4.chr19 59774253 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638298 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527245 1 + 64156825 t i rheMac3.chr19 I 159 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47769806 118 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T a score=4766.000000 s hg38.chr19_GL949748v2_alt 837718 7 + 1064304 aaaaggc s panTro4.chr19 59774254 7 + 63644993 aaaaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638299 7 + 60714840 aaaagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527246 7 + 64156825 aaaagcc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47769924 7 + 51301725 aaaaacc i papAnu2.chr19 I 118 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T a score=840885.000000 s hg38.chr19_GL949748v2_alt 837725 787 + 1064304 attttaatgggatgagatgaaaactcatcgcga-ttgtaatttacatttctgtgatgatgagtgatgctgagcactttttcatatacgtgatcgccatttctatgttttgtttgtggagaaatgtctcctcatgtcttttgctcgttttttaattaaa----ttgttttattgagttgtttgagcttcttatatttccagttattaatcccatctcagatgaatagtttgcaaatatttgctcctattttgtgggttgtctcttcactttgttggtttatc-tttggtggtgcagaagttgcttggtttgatgtaat-cctaatggtctattttttgctttgattacttgtgttttgaaggttttaaacaaaatgtctttcatcagacaaatgtc---------ttccccattattttcttctacatgtttcataggttcaggccttagactcatgtttttaatccattttcatttgatttttgtgtaaggtgacaggtatagatgcagttttattcctctgcatgtagatatccagttttccccacaccatttattg--aagactgtcctttcctgattgtaagttctcggcacctttgtcaaagtccattaaatgggc----tgggtatggtggctcacacctgcaattccagcactttgggaggccgaggcgggtggatcacctaaagccaggagttcaagaccaggctggccaacagagtgaaacctcgtctctactaaaaatacaaaaattagctgagcatggtgatcagtgcctgtaataccactactcaggagtttgaagca s panTro4.chr19 59774261 786 + 63644993 attttaatgggatgagatgaaaactcatcgcga-ttttaatttacacttctgtgatgatgagtgatgctgagcactttttcatatacgtgatcgccatttgtatgttttgtttgtggagaaatgtctcctcatgtcttttgctcattttttaattaaa----ttgtt---ttgagttgtttgagcttcttatatttctagttattaatcccatctcaggtgaatagtttgcaaatatttgctcctattttgtgggttgtctcttcactttcttggtttatc-ttttgtggtgtagaagttgcttggtttgatgtaag-cctaatggtctattttttgctttgattacttgtgctttgaaggttttaaacaaaatgtctttcctcagacaaatgac---------ttccccattattttcttctacatgtttcataggttcaggccttagactcatgtttttaatccattttcatttgatttttgtgtatggtgacaggtagaggtgcagttttattcctctgcatgtagatatccagttttccccacaccatttattgaaaagactgtcctttcctgattgtaagttctcggcacctttgtcaaagtccattaaatgggc----tgggcgtggtggctcacacctgcagttccagcactttgggaggccgaggcgggtggatcacctaaagccaggagttcaagaccaggctggcgaacagagtgaaacctcatctctactaaaaatacaaaaattacctgagcatggtgatcagtgcctgtaataccactactcgggagtttgaagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638306 769 + 60714840 attttaatggggtgagatgaaaactcacttcga-ttttcatttgcatttctctgatgatgagtgatactgagcacttcttcata----------------------------tgcggggaaat-----ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgccttgtctcttcacgttgttggtttatc-tttagtggcgcagaagttgcttagtttgatgtaat-cccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatctttaatccattttcatttgatttttgtgtatggtgacaggtagaggtgcagtttcattcttctgcatgtagatgtgcaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggc----tgggcatggtggctaacacctgcaattgcagcactttgggagaccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctctactaaaaatacaaaaattagctgagcatggtggtcagcccctgtaataccactactcaagggtttgaggtg i ponAbe2.chr19 C 0 I 53815 s rheMac3.chr19 60527253 805 + 64156825 attttaatggggtgagatgaaaattcattgtga-ttttaatttgcatttctctgatgatgagtgaaactgaacactttttcacacacatgatggtcatttatatgttttgtttgtggagaaatgtctgttcaagtcttttgctcattttttagttaaat--tttactttattgagttatgtgatcttcttatatttctagttattaatcctgtctcagatgcatagtctgcaaatattggctcccattctgtgggttgtctcttcactttgttgtttgcttgttttgcagtacagaagctgcttagtttgatgtaat-cccaatggtctgtttattgctttgattatttgtgtttttgaggtttcaaacaaaatgtctcttctcagacaaaggtcctgaagcacttcctcaatattttcttctacgtgtttcataggttcaggccttagactcatgtatttattccattttgatttggtttttgtggatgatgagacgtagagctgcagtttcattcctctgcatggagataaccagttttccccacattgtttattgaaaagactgtcctttcctgattgtagcctcctggcacctttgtcaaaatgcattggattggcagagcgggcatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtagatcacctgagacgaggagtttgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagcttagcattgtggtcagtgcctgtaataccactactcaagactctgaggca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47769931 801 + 51301725 attttaatggGGTGAGATGAAAATTCATTgtgatttttcatttgtatttctctgatgatgagtgatacTGAACAC--TTTCATACACATGATGGCCatttatatgttttgtttgtggagaaatatctcttcatgtcttttgctaattttttagttaaattatttgttttattgagtTATGTGAGCTTCTTGTATTTCTAGTTATAAATCCCgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttattggttttgcagtgcagaagctgcTTAGTTGGATATAAT-CTCTGTGGTCTGTTTTTTGCTTTGATTACTTGTGTTTTTGAGGTTTTAaacaaaatgtcttttctcagacaaatgtcctgaagcatttccccaatattttcttctacatgTTTCATAGGTTCAGGACTTAGACTCCTGCATTTAATCTATTTGGATTTGTCTCTTCTGAATGGTGAGAGGAAGAGGTGCAGTTTCATTCC-CTGCATGCAGATAACCCATTTTCCCCACATCGTTTATTGAAAAGATTGTCCTTTCCTGATTGTAGGTTCTTGACACTTTTGTCAAAATGCATtggattggc----tgggcatggtggctcacacctgcaatcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttcaaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgaacatggtggtcaGCGCCTGTAATACCACTACTCGAGAgtctgaagca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488065 801 + 50890351 attttaatggggtgagatgaaaattcattgtgatttttcatttgtatttctctgatgatgagtgatactgaacac--tttcatacacatgatggccatttatatgttttgtttgtggagaaatgtctgttcaagtcttttgctcattttttagttaaattgtttgttttattgagttatgtgagcttcttatatttctagttat-aatcccgtctcagatgcatagtttgcaaatattggctcccattctgtgggttgtctcttcactttgttggttgcttattttgcagtgcagaagctgcttagtttgatgtaatcccctacggtccgttttttgctttgattactcgtgtttttgaggttttaaacaaaatgtcttttctcagaccgatgtcctgaagcatttccccaatattttcttctacatgtttcataggttcagggcttagactcatgtatttaatccatttggatttgacttttctgaatggtgagaggtagaggtgcagtttcattcc-ctgcatggagataacccgttttccctgcatcgtttattgaaaagactgtcctttcctgattgtaggttcttgacacttttgtcaaaatgcattggattggc----tgggcatggtggctcacacctgcaatcccaggactttcagaggccaaggtgggtggatcacctgagaccaggagttcgaggcccgcttggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcaccacctgtaataccactactcaagagtctgaggca i chlSab2.chr6 N 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T a score=1467415.000000 s hg38.chr19_GL949748v2_alt 838512 1267 + 1064304 agagaatttcttgaatccaggaagtggaggttgcattgagctgagattgcacctctacactccagcctgcatgacagagcaagattctatcacacacacaca----------aaagaaagccattggatgtaaatgcatggattatatctgtgttctccattctgttccatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtg-------------------atgctcctgttttctctttataccttcaagTCTCAAGACAGTGGGCATCGCACACAAAAATTATGGAGAAAAGGATCCCAAGACTCCCAGGGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCGTGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACAGAACCAAGCTCCAAATCTGGTGAGTAAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagtgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctctgaactccagacactccaacagtgaaagggatCTAGGGCCACCAAAGGGCTCAGCGAAGTCTCTTTACCTTTAATTTCCTGCAGGTGAGACCTCCTACAAGCTAGAAGAATAATTGCCAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTTTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCCGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGTG-GGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCATCAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGC---------TCATGCACGCACACTTCGACTCAGTGACTCATTCAGCCACAGCCCCATGCTCAGGCTGTGCAGTGTGGAAGCTtttcctattgttgccataacaaatttccacaagattcgtgtgtgaaaacaaaacggttatttaattatcttacagtgctgtagctcaaagcatgacgtgcatgtcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttttctcagcttctagaggctcccatgttccttggctcctggtacccttcctccttcctcaaa s panTro4.chr19 59775047 1267 + 63644993 agagaattgcttgaatccaggaagtggaggttgcattgagctgagattgcacctctgcactccagcctgcatgacagagcaagattccatcacatacacaca----------caaaaaagccattggatgtaaatgcatggattatatctgtgttctccattctgttccatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtg-------------------atgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACACACAAAAATTATGGAGAAGAGGATCCCAAGACTCCCAGAGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACAGAACCAAGCTCTAAATCTGGTGAGTAAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagtgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctcggaactccagacactccaatagtgaaatggATCTAGGGCCACCAAAGGGCTCAGTGAAGTCTCTTAATCTTTAATTTTCTGCAGCTGAGACCTCCTACAAGCTAGAAGAATAATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTTTTCTGCCTGCATTCCTTACTAGAGGACAAATTCCTGCGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTGATGAGGGTG-GGTGTTTTAGAGAAGTTCCACTTGCCCAGGAATGAATTACTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCTGTAACAGAGAACAGAGC---------TCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGGACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacagttatttaattatcttacagtgctgtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtcccagcttctagaggctcccacattccttggctcctggtccccttcctccttcctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56692890 1281 + 60714840 agagaattgcttgaatccaggaggtggaggttgcattgagctgagattgcacctctgcactccagcctgcatgacagagcaagattccatcaca---aaaaa----------aaaaaaaGCCAttggatgtaaatgcatggattatatctgtgttctccattctgttctatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtgatactcctgttttctctttatactcCTGTTTTCTCTTTATACCTTGAAGTCTCAAGACAGTGGGAATCACACACAAAAATTATGGAGAAGAGGATCCCAAGACTCCCAGGGTCCAACATTAGATAACAGAATGTTGGCCATGAACCAACCTCAAAGATTTCCATCAAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACAGAACCAAGCTCCAAATCTGGTGAGTAAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagtgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctctgaactccagacactccaacagtgaaagggatCTGGGGCCACCAAAGGGCTCAGTGAAGTCTCTTAATCTTTAATTTTCTGCAGCTGAGGCCTCCTACAAGCTA-AAGAATAATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTTTTCTGCCTGCATTCCTAACTGGGGGATAAATTCCTGGGGGCTT-AGAGAGGGAAGGGAAGGGAACATCTGATGAGGGTG-GGTGTTTTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTTGATCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGC---------TCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACAGCCACATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacagttatttaattatctttcagtgctgtagctcaaagtatgaagtgcatcttactgggctaaaatcaaggtgacagcaaggctgccttccccctgagggttccaggcaagaatctgcttctcacttttcccagcttctagaggctcccacattccttgactcctggtccccttcctccttcctcaaa i ponAbe2.chr19 I 53815 C 0 s rheMac3.chr19 60528058 1261 + 64156825 aaagaattgcttgaacccagtagacagaggttgttg-gaaccgagactgcacctctgcaatccagcctgagtaacagagcaagattccatctca---aaaaa-----------aagaatgccattgaatgtagatgcatgga-tatatctgtattctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgag-------------------atgttcctgttttCTCTCTGTACCATAAACTCTCAAGACAATGGGAAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGTTTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctc--tgactgtgggcctgtcttccaccatctctctgaactccagacactccaaaagcaaaagggatcttggcccagcacagggctccgtgaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTTTAGAGAAGATCCACTTGCCAAAGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCATGCACACCTTGCACGCACACTTCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCCGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacggctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgct---------tcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i rheMac3.chr19 C 0 I 28317 s papAnu2.chr19 47770732 1256 + 51301725 agagaattgcttgaattcaggagacagaggttgctgtgagccgagattgcacctctacactccagcttgggtgacagagcaagattccatctca---aaaaa---------acaaaacagccgtTGAATGTAGACGCATAGATTATATCTGTGTTCTTCATTTTACTCCGTTGTTCTATGCACTTTTCTTTATGCCAAcgtcatgctgttttgtttactacagctctgtaacatatttttaagtcaggtaatgtg-------------------atgttcCTGTTTTCCCTCTATATCTTAAAGTCTCGAGACAATGGgtaacacatacaaaaattatggaGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCGTGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTGTCTC-TATTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATTCAAGCCTTGGCTCAGCACCTCCCAGCTC--TGATTGTGGGCCTGTCTTCCACCATGTCTCTGAACTCCAGACACTCCAACAGCAAAAGGGACCTTGGCCCAGCACAGGGCTCAGTGAATTCTCTTAATCTCTAATTTTCTGTAACTGAGACCTCCTACAAGCTGAAACAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATGAATTCCT-GGGATttgaaagagggaaaggaagggaacaTCTAATGAGGCTGAGGTGTTTTAGAAAAGTTCCACTTGCCAAGGAATGAGCTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAA--------AGAG----------CCTTGCACGCACACTTCGACTCACTGACTCATTCAGCCATGGCCCCAAGCTCAGGCTGGGCAGT-TAGAATCCTTTCCTAGTGTTGCcataacaaatttccacaaaattGGTGGATGAAAACAAAacgactttttaattattttacagtgCTGTAGCTCAAAGGATGAAATGCacctcactgggctaaaatcaaggtgacAGCAAGgctgccttccctctgaaggTTCCAGGCGAGAATCTGCTCTTCACATGTCCCAGTTTCTAGAAGCTCCCACGTTCCTTGGCTCCtggtccccttcctccttcctcaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488866 1265 + 50890351 agagaattgcttgaattcaggagacggaggttgctgtgagacgagattgcacctctgcactccagcttgggtgacagagcaagattccatctca---aaaaaaaaaaaaaaaaaaaaaagccgttgaatgtagacgtatagattatatctgtgttcttcatttttctccattgttctatgcatttttctttatgccaacatcatgctgttttgcttactacagctctgtaacatatttttaagtcaggtaatgtg-------------------atattcctgttttcttTCTATATCTTAAAGTCTCAAGACAAGGGGCAAAACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCGGTCTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAACTCCAAAACCGGTGAGTAAA-AATCCCTTTTATCTCTGCTTTTGGAAACCTGGGGAGATggaagccttggattcaagccttggctcagcacctcccagctc--tgattatgggcctgtcttccaccatctctctgaactccagacactccaatagcaaaagggatCTTGGCCCAGCGCAGAGCTCCGTGAAGTCTCTTAATCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTAGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTTTAGAGAAGATCCACTTGCCAAGGAATGAACTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAA--------AGAG----------CCTTGCACGCACACTCCGACTCTCTGACTCATTCATCCATGGCCCCATGCTCAGGCTGTGCAGT-TAGAATCCtttcctattgttgccataacacatttccacaaaattggtggatgaaaacaaagcagctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgctcttcacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i chlSab2.chr6 C 0 T 34357 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T a score=1187.000000 s hg38.chr19_GL949748v2_alt 839779 2 + 1064304 gc s panTro4.chr19 59776314 2 + 63644993 ac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694171 2 + 60714840 gc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47771988 2 + 51301725 AC i papAnu2.chr19 C 0 I 26121 s chlSab2.chr6 47455774 2 + 50890351 ac i chlSab2.chr6 T 34357 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=209333.000000 s hg38.chr19_GL949748v2_alt 839781 471 + 1064304 ccacaaagactggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttgcccttcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcatccaggataccctccttttaagttcagctgactagcaaccataattccatctgcaatcttcattcctcct-ttcatgtaaaataacatattcacaagctatggaggctaggacatggacatttttggggtgggacaacattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGTTCTTGGGACACTGATCTTGCAGATGGTTAAATGGGAGGGCAGAAAATGTAGGCACAAGGGGACCAATAAATGAATGATCTATTGAGAAGCATCTGTGCATGAAATCTATTTATTTATGTATTTA--- s panTro4.chr19 59776316 467 + 63644993 ccacaaaggctggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttccccttcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcatccaggataccctccttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcct-tccatgtaaaataacatattcacaagctatggaggctaggacagggacatttctggggTGGGGTGGCATTCT----TCTTCCACAAATAGTAAACAAGATGCATTTACCCTCTGTTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGTATGCACAAGTGGACCAATAAATGAATGATCTATTGAGAAGCATCTGTGCATGAAATCTATTTATTTATGTATTTA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694173 465 + 60714840 ccaaaaaggctggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctttcccttcttccacatgttttgaaaacttggggattctatcaggttcactaagatgaaaatccctcataatctcccggaagtc-tccaggatacccttgttttaagttcagctgattagcaactgtaattccatcagcaatcttcattcctcct-ttcatgtaaaataacatattcacaagctatggagactaggacatggacatttttggggTGGGGTGGCATTCT----TCTTCCACAAATAGTAAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGACAG-AAATGCATGCACAGGTGGACCAATAAATAAATGATCCATTGAGAAGCATCGGTGCATGAAatctatttgtttatttattta--- i ponAbe2.chr19 C 0 T 53820 s chlSab2.chr6 47455776 472 + 50890351 ccacaaagactggtcacgtctcacatggcatcactcagacccttcttccttgtccacacctctttctctgaatgttcctctgctttcttcctcatttcttaagggctttgggattttattgggttcaccaagat---aatctatcatcatctccctaaaatcatccaggataccctcctttccagttcagctgattagtaaccgtaattccatctgcaatcttcgttcttcctctccacgtaaaatcacatattcacaaggtgtgaaggctaggacagggacattttgggggtggggtgg-attctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGGGAGGAAAGAAAATGAATGCACAAGTGGACCTATAAATGGTTGATCCACTGGGAAACATCGGTGCATGAAattgatttatttatgtatgtatta i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=630.000000 s hg38.chr19_GL949748v2_alt 840252 7 + 1064304 CCTACtt s panTro4.chr19 59776783 7 + 63644993 CCTACTT i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47456248 7 + 50890351 attATGT i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56694638 53820 + 60714840 T e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=225728.000000 s hg38.chr19_GL949748v2_alt 840259 545 + 1064304 gtttattgagacggagccttgctctgtcgtccaggctagagtgcggtggcatgatctcggctcactgcaacctccacctcctgggctgaactga-tctcctccctcagcctctccagtagctgggattacagaccacaaccaccacgcccggctaactctttttgcatattttctgtagagaggatgtttcaccatgttggccaggctggtctcaaattcccaacctcaggtgatccaatagcctctgcctcccaacacgctgggataagaggcatgagccacggggccaagccAAATTTTCAAATCAATAATAGATAATGCTGAGTGTATTATTTCAGGTGACAGAGAAGTTCTCACTAATCA---GATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTGCACACACAGCTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTGA-CTCAAATGCTGGGAATGAGGTGGGGAGAATGACAAGATGACTGTAGAGAGA s panTro4.chr19 59776790 545 + 63644993 Atttattgagacggagtcttgctctgtcatccaggctagagtgcagtggcatgatctcggctcaatgcaacctccacctcctgggttgaactga-tctcctccctcagcctctccagtagctgggattacagaccacaaccaccaagcccggctaactctttttgcatattttctgtagagaggatgttccaccatgttggccaggctggtctcaaattcccaacctcaagtgatccaatagcctctgcctcccaacccgctggggtaagaggcatgagccacGGGTCCAAGCCAAATTTTCAAATCAATAATAGATAATGCTGAGTGTATTATTTCAGGTGACAGAGAAGTTCTCACTAATCA---GATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCACAAATGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC-CTGAAATGCTGGGAATGAGATGGGGAGAATGACAAGACGACTGTGGAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640818 547 + 60714840 gtttattgagacagagtctccctctgtcttccaggctacagtgtagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagtctctcgagtagctgggattacaggcaactgccaccacacccggctaattcttattgtatattttttgtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagtgatccaaccatctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAGTTCTCACTAATCA---GATATTTGTGACATTAATGAAAAAGACGAATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCTGATGTTGAAGGAAGAGGTTCTGCATTCAAATGCTGGGAATGAGTTGGGGAGAATGATGAGACGACTGTAGAGAGA i ponAbe2.chr19 T 53820 C 0 s chlSab2.chr6 47456255 546 + 50890351 Atttattaagatggagtctcgctctatcccctaggctgcagtgcagtgtcacgatcttggctcactgtaacctccgcctcctgggttcaagtgattcttctgcctcagcctctcaagcagcttgga-tacaggcacccgccaccacacctggctaattctttttgtagattgttgttagagaccatgtttcaccatgtggcccagtct-atctccaactccctatctaaagtaatccgaccgcctcagcctcccaaagtgctcggattataggcgtgaaccccggcacccagccAGAATTTAAAATAAATAACAGATAATACTGAGTGTATGATTTCAGGTCACAGAGAAGTTCTCACTGATCAAATAATACTTGTGATCTTAATGAAAAAAATAGATC-AACCCCTGGAAGACTGGCGGAAGGATTTTCCACACACAGCAGTCAGCTGTGAAGGCACAAAGGTGACAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGAAACACTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA i chlSab2.chr6 C 0 I 6918 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=29.000000 s hg38.chr19_GL949748v2_alt 840804 1 + 1064304 C s panTro4.chr19 59777335 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56641365 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47456801 6918 + 50890351 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=101818.000000 s hg38.chr19_GL949748v2_alt 840805 209 + 1064304 GGAGAGCACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGCGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGAGGTAACCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAAGGGAGGCTCAGTTGCATAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTGCCGCCCCACTGGTGAAATGTGGTGCTGA s panTro4.chr19 59777336 210 + 63644993 GGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCAGGGTAACCAGGAATCCCTACGTGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGATCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56641366 210 + 60714840 GGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGAGAGGCCCAGGTGCGTAACTGGAATCTAGGAGAGTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGA i ponAbe2.chr19 C 0 I 53092 s chlSab2.chr6 47463719 209 + 50890351 GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCGGGCTAACTAGGAATCCCTACGTGATTTATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCACCTCACTGGTGAAATATGTTGCGTA i chlSab2.chr6 I 6918 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=151235.000000 s hg38.chr19_GL949748v2_alt 841014 337 + 1064304 TTTAGACACTAAATGAATGAAGTAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTAATTTTTCCTGGTAGTTTAATCCTCGCTTCACTAACTTATTTCTGAGATTTATTTCTCCTGCATCTAAATCAATACCTGGCAGAGGAGGGAGAGCTAGATGAGGGGTGGTGCAAATGAAGGGACCTAGTATAGCATAATATACAAGGCTGTGAAcggtggctcacgcctgtaacccagcacttcaggaggccaacgcgggtggatcacatgaagtcaggagttcgagaccagcctggccaacatggagaaaccc s panTro4.chr19 59777546 337 + 63644993 TTTAGACCCTAAGTGGATGAAGTAGATGGATATAAGATATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTCGCTGGGTTTGATTTCTCCTGGTAGTTTAATCCTCGCTTCACCAACTTATTTCTGAGATTTATTTCTCCTGCATCTAAATCAATACCTGGCAGAGGAGGGAGAGCTAGATGAGGGGTGGTGCAAACGAAGGGACCTAGTATAGCATAATATACAAggctgtgaacggtggctcacgcctgtaacccagcacttcaggaggccaacgcgggtggatcacatgaagtcaggagttcgagaccagcctggccaacatggagaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694668 337 + 60714840 TTTAGACACTAAGTGGGTGAAGTAGATGGATATAACACATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTGGATTTTTCCTCGTAGTTTAATCCTTGCTTCATTAACTTATTTCTGAGATTTATTTCTCCTGCACCTAAATCAATACCTGGCAGAGGAGTGAGAGATAGATGAGGGGTGGTGCAAATGAAGGGACCTATTATAGCATAATATACAAGGCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaacgcaggtggatcacatgaagtcaggagttcgagactagcctggccaacatggagaaactc i ponAbe2.chr19 I 53092 C 0 s chlSab2.chr6 47463928 337 + 50890351 TTTAAACACTAAATGAATGAAGTGGATGGATACAAGATGTGTATGTGAGGTAGAATAATTCACAGGGAGGGCTTGCCTGGTTTGATTTTTCCTAATTGTTCAATCTTCACTTCATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATACCTGGCAGAGGACTGATTGATACATGAGGCGTGGTGCAAAGGAAGAGACTTATTATAATATAACACGCAAGGTTGTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggcggatggatccattgaggtcaggagttcaagaatagcctggacactatgctcaaaccc i chlSab2.chr6 C 0 I 33 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=8743.000000 s hg38.chr19_GL949748v2_alt 841351 37 + 1064304 tatctctactaaaaatacaaaaattaaacaggcatga s panTro4.chr19 59777883 37 + 63644993 tatctctactaaaaatacaaaaattaagcaggcatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56695005 37 + 60714840 tatctgtactaataatacaaaaattaagcaggcgtgg i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47464265 33 + 50890351 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=341126.000000 s hg38.chr19_GL949748v2_alt 841388 751 + 1064304 tggtggtgcatgactgtaatcccag---ctactctggaggaggaagcaggagaatgacttcagccctggaggcagaggttgcagtgagtggagatcgcatcactgcacaccagcctgggctacacagggatactctgtctc-aaaaaataaaaataaaaaaTACATAAATATA--ATAATATACACAAATGATGCAGGCACCTGAATTCCAATCATCATTTTTCTATTCCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGAAAATCAGCCTAAAACCTCTTCCATATTTGGCTTTCTGTGAACATGAGATCATATGGAAAATATGAAAGCCCCCTGAACCCACCAGCACAGGCCCTGAAATAGGGAAAGTGCTCTGTTCATCACAAGAAACTTTCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATACAGATAGATCATGGGGAGGTAAACGCTAATACTCCTTGGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTTTTGAAGCAATAGATGGTGGAGGGGGTGGTCTTT-CCCCCAGCCTCTCAGGTGGAACAGCAGCCTAACATGTGTCTCGCGAGATCACAAAGAGTAGCACGTTTCACATGGGCTTCATCATTATTTCCTGGCTGTTTGACATAAGAGAATTCTACTTTGCTTTTTTGATCTTGATTT s panTro4.chr19 59777920 754 + 63644993 tggtggtgcatgactataatcccag---ctactctggaggatgaagcaggagaatgacttcagccctggaggcagaggttgcagtgagtggagatcgcgtcactgcacaccagcctgggtgacacagggatactctgtctcaaaaaaataaaaataaaaaaTACATAAATATAATATAACATACACAAATGATGCAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGGTCCTTTATCTTATCCATTAGAAAATCAGCCTAAAACCTCTTCCGTATTTGGCTTTCTGTGAACATGAGATCATATGGAAAATATGAAAGCCCCCTGAACCCACCAGCACAGGCCCTGAAATAGGGAAAGTGCTCTGTTCATCACAAGAAACTTTCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATACAGATAGACCATGGGGAGGTAAACGCTAATACTCCTTGGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTTTTGAAGCAATAGATGGTGGAGGGGGTGGTCCTT-CCCCCAGCCTCTCAGGTGGAACAGCAGCCTAACATGTGTCTCGTGAGATCACAAAGAGTAGCACGTTTCACATGGGCTTCATCATTATTTCCTGGCTGTTCGACATAAGAGAATTCTACTTTGCTTTTCTGATCTTGATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56695042 751 + 60714840 tggtggtgcatgactgtaatcccagctcctactctggaggaggaagcaggagaatgacttcagccctggaggcagaggttgcagtgagtcgagatcacgtcactgcacgccagcctgggcgacacagggacactccatctc-aaaaaataaaaataaaaaaTACATAAAT-----ATAACATACACAAATGATGCAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGAAAATCAGCCTAAAACCTCTTCCGTATTTGGCTTTCTGTGAACATGGGATCATATGGAAAATATGAAAGCCCCCTGAACCCACCAGCACAGGCCCTGAAATAGGGAAAGTGCACTGTTCATCACAAAAAATTTGCCCCCTCACCCAAATCCCCTACCTCAGCCCTACTTCCAATCACCTGTGGAGATACAGATAGACCATGGGGAGGTAAACGCTAATACTCCTTGGAGTGAGCTCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCGTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTT-CCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACGAAGAGTAGCACGTTTCACACGGGTTTCACCATCATTTCCTGGATGTTTGACATAAAAGAATTCTACTTCTCTTTTTTGATCTTGATTT i ponAbe2.chr19 C 0 T 53089 s chlSab2.chr6 47464298 747 + 50890351 tggtggcgcatgcctgtaataccag---ctattcgggaggctgaagcaggagaatggcttccacccgcgaggcagaggtttcagtgagccgagatcgc-tcattggactacaccctgggtgacagagtgagactctatctc-aaaaaataaaaatacaaaaCACATAAATCTAATATAGCATACAGGAATGACAAAGGCACTTCAATCCCAATTATCATTTTTCTGTTTCTCTATAACGACTTCTTTGATCCTTTATCTTATTCATTAGAAAATCAGCCAAAAACGTCTTCCCTATTT-GCTTTCTGTGAGCCTGAGATCATATGGGAAATATGAAAGGCCCCTGAACCCACCAGCACAGGCCCTGGAATAGAGAAAGTTCTCTGTTCATGGCATAAAACTTGCCCCCTCAGCCAAATCCCCCACCTCACGCCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGATAAAAACTAACATTCTTTGGAGG----TCAGACCTTGGACTCAGAGACCAGTGCCAGCACCATCTCCTGGTCACCTTTTGTACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTGCCCCCGGACTCTCAGGTAGAACAGCAGCCTAATATATGACTCCCGAGATCACAAA-AGTAGCACGTTCTTCACAAGCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACTGTTTTGATCTTGATTT i chlSab2.chr6 I 33 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=131126.000000 s hg38.chr19_GL949748v2_alt 842139 286 + 1064304 CACTTTTGTGTCCTTTTCTTGGAGAATGTAATTTG----AGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTTCCAGAGAAGACTCTaaacacctgctgtactgcacctgggcctatgccaatttctatcactcaccgtcactccagggagacagaacacacagagaatacgttacat-aggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaacgtgagccagtccctcaagg s panTro4.chr19 59778674 286 + 63644993 CATTTTTGTGTCCTTTTCTTGGAGAAGGTAATTTG----AGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCACTGTGTATCAGTCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcacttcagggagacagaacacacagagaatacgttacat-aggcaggttcattactaacagataagcagcgagtgacaactgaagcctacatttcaatgtgagccagtccctcaagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642704 290 + 60714840 CACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacat-aggcaggttcattactaacagataagcagtgagtgacaagagaagcctacatttcaatgtgagccagtccctgaagg i ponAbe2.chr19 T 53089 C 0 s chlSab2.chr6 47465045 289 + 50890351 CACGTT--ATTCCTTTTCTTGCTGAATGTAATGCGTTTGAGTCAAGTGGGTTGTGGCTGTAGAAATTGTAAGGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTactgcacctggggctatgccagcttctatccctcaccgtcactccagggagacagaacacacagagaatacatcacgtaaggtgggttcgttactaacagataaccagtaagtgacaacagaagcctgcatttcagtgtgagccagtcccccaagg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55638858 5933 + 59248254 T e rheMac3.chr19 60529319 28317 + 64156825 I a score=208346.000000 s hg38.chr19_GL949748v2_alt 842425 256 + 1064304 ctcagaaaagctgctcgggacatatggagtcacctcatttgcagtgtatctgggggaagccagaaaatagcccagcctgggttttgtaccctgaagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcacaggctgttctgagacgttcctcctgatctcaggacgttgctgtcttagtccatttttgttgctataaaagaacacttgagcctgggttacttCt s panTro4.chr19 59778960 255 + 63644993 ctcagaaaagctgctcgggacatatggagtcacctcatttgcagtgtagctgggggaagccagaaaatagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctccaggaagaacaggaagacagcccagcctgttctgagacgttcctcctgatctcaggacgttgctgtcttagtccatttttgttgctctaaaggaacacttgagcctgggtaacttC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642994 256 + 60714840 ctcagaaaagctgctccggagatatggagtcatcccatttgcagggtagctgggggaagccagaaagcagcccagcctgggtgttctaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaaaaacaggaagacagcccaggctcttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttct i ponAbe2.chr19 C 0 I 91533 s macFas5.chr19 55632925 256 + 59248254 ctcagaaaagctgttcgggatatatggagtcaccccatttgcactgcagctgggggaacccacaaagcagccctgcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttagtccctttttgaggctataaaagaacacttgagcctgggtaacttct i macFas5.chr19 T 5933 I 50971 s chlSab2.chr6 47465334 255 + 50890351 ctcagaaaagctgctcgggacatatggagtcactccatttgcactgcagctgagggaacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggacgaacaggaagacagccca-gctgttctgggactttcctcctgatctcaggatgttgctgtcttagtccatttttgtggctgtaaaagaacacttgagcctgggtaacttct i chlSab2.chr6 C 0 I 49401 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e papAnu2.chr19 47771990 26121 + 51301725 I e rheMac3.chr19 60529319 28317 + 64156825 I a score=231881.000000 s hg38.chr19_GL949748v2_alt 842681 2558 + 1064304 tttttttttttttttttttttGTATAGTGCTTCTGATGAGCTTTTTTTTAAAAtttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccatcaactcgtcatttagcattaggtatatctcctaatgctatccctcccccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctataagtgagaacatgcggtgtttggatttttgtccttgtgatagtctactgagaatgatgatttccaatttcatccatgtccctgcaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttcatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacgtgtccatgtgtctttatagcagcatgatttatagtcctttgggtttatacccagtaatgggatggctgggtcaaatggtatttcaagctctagatccctgaggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcccgactttttaatgatcgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtcatggtgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtcctttgcccactttttgataggattgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctcccattttgtaggttgtctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccgtttgtcaattttggcttttgttgccgttgcttttggtgttttagacatgaagtccttgtccatgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtctaacgtttaagtctttaatccatctcaaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacctatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattgcttgtttttctcaggtttgtcaaagatcacatagttgtagatatgtggcattatttctgagggctctattctgttccattgatctatatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggcagcatgatgcctccagctttgttcttttggcttaggattgacttggcaatgcaggctcttttttgattccatatgaactttaaggtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccattttcacgatcttgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattctgtatcctgagactttgtagaagctgcttatcagcttaaggagattttgggctgagacaatggggttttctatatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttccttctcctgcctaattgccctggccagaacttccaacactatgttgaataggagtggtgaaagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatactggctgtgggtttgttatagatggctcttattattttgagatacgtcccatcaatgcctaatttattgagagtttttagcatgaagcgttgttgaattttgtcaaaggccttttctgcatctattgagatagtcgtccggtttttgtctttggttctgtttatatgatggattacatttattgatttgcatatattgaaccagccttgcatcccagagcctgggcaacttctagagaaaacagatttgtttgcctcacagttctgcaggctgtactggaagcatggcaccagcatctgtttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacaGAGATCACA s panTro4.chr19 59779215 2555 + 63644993 tttttttttttttttttttttGTGTAGTGCTTCTGATGAGCTTTTTTTTTAAA-ttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccatcaacttgtcatttagcattaggtatatctcctaatgctatccctcccccct-cccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgcagtgtttggatttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttcatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatggcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttcaagctctagatccctgaggaattgccacactgacttccacaatggttgaactagtttacagtcccatcaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtcatggtgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcgcccactttttgatagggttgtttgcttttttcttgtaaattcgtttgggttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctctcattttgtaggttgtctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgtccatgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtctaacgtttaagtctttaatccatctcgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacctatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattgcttgtttttctcaggtttgtcaaagatcagatagttgtagatatgtggcattatttctgagggctctattctgttccatttatctatatctgtgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggcagcatgatgcctccagctttgttcttttggcttaggattgacttggcgatgctggctcttttttggttccatatgaactttaaggtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccattttcacgatattgattcttcctacccatgagcatggaatgttcttccatttctttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacgtcccttgtaaattggattcctaggtattttattctttttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtatataagaatgcttgtgattgttgtacattgattttgtatcctgagactttgtagaagttgcttatcagcttaaggagattttgggctgagacaatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttccttctcctgcctaattgccctggtcagaacttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgtttccagtttttgcccattcagtatgatactggctgtgggtttgtcatagatggctcttattattttgagatacgtcccaccaatacctaatttattgagagtttttagcatgaag-gttgttgaattttgtcaaaggccttttctgcatctattgagataatcgtgtggtttttgtctttggttctgtttatatgatggattacatttattgatttgcatatattgaaccaggcttgcatcccagagcctgggtaacttctagagaaaacagatttgtttgcctcacagttctgcagactgtactggaagcatggcaccagcatcggtttcctgtgatggcctcaggctgctcccactctgggagaagggaaggagggtctgtctgtgcagagaccacagagatcaca i panTro4.chr19 C 0 I 36888 e ponAbe2.chr19 56643250 91533 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47465589 49401 + 50890351 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55633181 50971 + 59248254 I e rheMac3.chr19 60529319 28317 + 64156825 I a score=0.000000 s hg38.chr19_GL949748v2_alt 845239 32001 + 1064304 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e ponAbe2.chr19 56643250 91533 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47465589 49401 + 50890351 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55633181 50971 + 59248254 I e rheMac3.chr19 60529319 28317 + 64156825 I e panTro4.chr19 59781770 36888 + 63644993 I a score=201405.000000 s hg38.chr19_GL949748v2_alt 877240 2231 + 1064304 aagctttgcggcagtacagcccaggtaatttgctgagcttgatcggtgtcagggtcagtccaagtgaaagcgaagagaggctgggatgaagggtgcaaaggaatagtaaagaaagcacgtttgagatccagaacagaataatgggttgtagaggcaggtattgaggataggagagtatatgggtttggcactacggggtggataggcaaaacaatttggttgataaggcgcagatcctgaactaatgtgtaagccttgtctggttttaggacaggtaaaatgggagaattgtaaggggagtttataggctttaaaaggccatgctgtagcaggctttaatccttttaaagcgtgctgcggaatgggatattggcgttgagtggggtaagggtgattaggttttaatgagatggtaaggggtgcatgatcggtcaccaaggagggagtagaggtatcctatacttgtgggttaaggtggggggatgcaagaggaggaagcaaaggaggctttggattgggaagaatggcagcaatgagatatagctgtagtccaggaacagtcagggaagcagataatttagttaaagtgtctcagcctaataagggaactgggcaggtggggataactgaaaaggagtgcttgaaagagtattgtctaagttggcaccagagttggggagttttaagaggtttagaagcctagctgtcaatacctacaacagttatggaggcaagggaaacaggcccttgaaaagaaggtaatgtggagtgggtagcctccatattgattaagaaggggacgggcttaccttccactgtgagagttacctagactgt----gatggtcctgtaggcttctgaggcgatcgggatcgggcagtgtcagtcttcagctgctaagccgagaagatctgggaaggagtcagagagccttgggccagagttctagctgctctgggagtggctgccaggtgagttgaacagtccgattttcagtggggtcccgcacagatgggatgcggcttaggaggaatcccaggctgtggacattccttggcccagtggccagatttccagtacttgtagcaagctcctgggggaagaggttctggaggaacccctggcagctgcggttcaggcgtttggagttctcgtgtgctggagatgtggctggggtttgtctcatctggatactggagtggaggcaaggaattgcaactcagaaatatgttgctatttggctgcctctactctattactgtacaccttgaaggcgaggttaattaagtcttgttgtggggtttgagggacagaatttaatttttggagctttatttaatgttgggagcagatttggtaataaaatgtatattgagaataagacggccttttgacttagggtctagggctgtaaagcgtctcagggttgctgccaaatgagccatgaactgggctgtgtttttaaatttgatgaaaaagagcctaaacactatctgatttgggagaggtcagataaagaaaaaggagcattaaccttgactatgcctttagcttcagccacctttttaagaggaaattgctgggcagttgggggagggctagtcatggaatggaactgtaagctggaccgggtgtgaggaggggaggtgataaaaggattatagggtggaggagcggaggctgaggaagaattgggacccagctcggcctggcgaggaggggagatgtcagatgggtctgtagaaaaggaagattagaaagactcagcgatgcttggggttgggactgacgggacaggcgggagggaaagaaggaagatttgggacgagttgcactgggcatagagactagggagggaccgatgtgtaaaagaatgcctggatgtcaggcacctcagaccatttgcccattttacaacaagaattatttagatcttgtaggatggaaaaattgaaagtgccgttttctggctatttggaaccactgtcaagtttgtattggggtcaagcagcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaggtttttaagaacacaggctaagggagaagaaggaggaatggagggtggaaggttgcccatactgaaggaggcaagcacagagaaaagagagagtagagacatggagggaaggggttcaggggttcttaccttccagaaaagcgggaaaggggtcagggcaca s panTro4.chr19 59818658 2229 + 63644993 aagctttgcggcagtacagcctaggtaatttgctgagcttgatgggtgtcagggtcagtccaagtgaaagcgaagagaggctgggattaagggtacaaagcaatagtaaagaaagcatgtttgagatccagaacagaataatgggtggttgagggaggtattgaggataggagagtatatgggtttggcaccacggggtggataggcaaaacaatttggttgataaggtgcagatcctgaactaatgtgtaagccttgtctggttttaggacaggtaaaatgggggaattgcaaggagagtttataggctttaaaaggccatgctgtagcgggctttaatccttttaaagcgtgctgtgggatgggatattggcattgagcggggtaagggtgattaggttttaatgagatggtaaggggtgcatgatcggtcaccaaggagggagtagaggtatcttatacttgtgggttaaggtggggggatacaagaggaggacgcaaaggaggctttggattgggaagaagggcggcaatgagatacagctgtggtccaggaatagtcagggaagcagataatttagttaaagtgtctcagcctaataagggaactgggcaggtggggataactaaaaaggagtgcttgaaagagtattgtctaagttggcaccagagttggggagttttaagaggtttagaagcctagctgtcaatacctacaacagttatggaggcaagggaaacgggcccttgaaaagaaggtaatgtggagtgggtagcctccatattgattaagaaggggacaggcttaccttccactgtgagagttacctagactgtctgtgatggtcctgtaggcttccgaggtgatcggg------cagtgtcagtcttcagctgctaagccgagaagatctgggaaggagtcagagagccttgggccagagttctagctgctctgggagtggctgccaggtgagttgaacagtccgattttcagtggggtcccgcacagatgggacgcggcttaggaggaatcccaggctgtggacattccttggcccagtggccagatttccagtacttgtagcaagctcctgggggaagaggttctggaggaaaccctggcagctgcggttcaggcgtttggagttctcgtgtgctggagatgtggctggggtttgtctcatctggagactggagtggaggcaaggaattgcaactcagaaatatgttgctacttggctgcctctactctattattgtacaccttgaaggcaaggttaattgagtcctgttgtggggtttgagggaccgaatttaatttttggagctttatttaatgtcgggagcagatttggtaataaaatgtattttgagaataagatggccttttgacttagggtctagggctgtaaagcatctcagggttgctgccaaacaagccatgaactgggctgtgtttttaaatttgatgaaaaagagcctaaacactatctgatttgggagaggtcagataaagaaaaaggagcattaaccttgactatgcctttagctccagccacctttttaagaggaaattgctgggcagttgggggagggctagtcacggaacggaactgtaagctggaccgggtatgaggaggggaggtgataaaaagattacagggtggaggagcggaggctgaggaagaattgggacccagcttggcctggcaaggaggggagatgtcagatgggtctgtagaaaaggaagattagaaagactcagcgatgcttggggttgggactgacgggacaggcgggagggaaagaaggaagatttgggatgagttgcactgggcacagagactagggagggaccgatgtgtaaaagaatgcctggatgtcaggtacctcagaccgtttgcccattttacaacaagaattatttatatcttgtaggatggaaaaattgaaagtgccgttttctggctatttggaaccactgtcgagtttgtattggggtcaagcagcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaggtttttaagaacacaggccaagggagaaggaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcacagagaaaagagagagtagagacacggagggaaggggttcaggggttcttaccctccagaaaagcgggaaaggggtcagggcaca i panTro4.chr19 I 36888 C 0 e ponAbe2.chr19 56643250 91533 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47465589 49401 + 50890351 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55633181 50971 + 59248254 I e rheMac3.chr19 60529319 28317 + 64156825 I a score=274116.000000 s hg38.chr19_GL949748v2_alt 879471 1104 + 1064304 gaagtaagggattggggtgcagagacaagaggtcggggtgtggaaataagggatcggggtgcagagataagacgtcagggcacagaaataagggatcgggggattcttgccccctagaaaagcggtacttgccactaagggtgaaggagaaggggttggggggttcttgcccccccagaaaagcagagaaggggtagagacac--agagaaggagttgggggttcttgcccccccagaaaagcagtacttgccactaagggtgaaggaccaaggcaggcatccccatgtggtcagacacctctgaaacgtgggtgaataatcagagaggtgtccctgcgtgattaaacaccaagggaaggctgccttcccgagtccatgaccggcgctggagttttgggtccacgaataaagcgcgtctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggagagattgaagagtg-----------gaaaggagaaagtggttgagggatagtgagagaggttggagaagagagtaaaaagaggctgcttactggatttaaaattggtgagatgttccttgggctggttggtctgaggacgagaggtcgtaggtggatctttctcatggagcaaagagcaggaggacaggggattgatctcctaaggaagatcccctgattcgagttatggcaccaaaTTtcactcacgtccgtgtgaagagaccaccaaacaggatttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccagaaagagagtcagcaaagggagataggagtgcggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaaggggg-ttgttctctggcgggcaggagtggggttcacaaggtgctcagtaggggagcttttgagccgggatgagccaggagaaggaatttcataagataatgtcatcacttaaggcaagaacaggccattttcatttctttcgtggtggaatgtcatcagttaaggcaggaaccggccatctggatgtgtacatacaggccacagggggatatgatggcttagcttgggctcagaggcctgaca s panTro4.chr19 59820887 1090 + 63644993 gaagtaagggattggggtgcagagataagaggtcggggtgtggaaataagggatcggggtgcagagataagaggtcggggcacagaaataagggatcagggggttcttgccccctagaaaagcagtacttgccactaaggatgaaggagaaggggttggggggttcttgcccccc-agaaaagcagagaaggggtagagacac--agagaaggagttgggggttcttgcccccccagaaaagcagtacttgccactaagggtgaaggaccaaggcaggcatccccgtgtggtcagacacctctgaaacgtgggtgaataatcagagaggtgtccccgcatgattaaacaccaagggaagactgccttcccaagtccatgacctgcgctggagttttgggtccacgaataaaacgcatctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggagaaactgaagggtg-----------gaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaaaaagaggctgcttactggatttaaaattggtgagatgttccttgggctggttggtctgaggaccagaggtcgtaggtggatctttctcatggagcaaagagcaggaggacaggggattgatctcct--------------gattcgagtcatggcaccaaaTTtcactcacgtccatgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccaaaaagagagtcagcaaagggagataggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaaggggggttgttctctggcgggcaggagtgggggtcacaaggtgctcagtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaagaacaggccattttcatttctttcgtggtggaatgtcatcagttaaggcaggaaccagccatctggatgtgtacgtgcaggccacagggggatatgatggcttagcttgggctcagaggcctgaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56734783 1110 + 60714840 gaaataagggatt-gggtgcagagataagaggtcagggtgtggaaataagggatcggggtgcagagataagaggttggggcacagaaataagggattgggaggttcttgccccctagaaaaatggtacttgccactaagggcaaaggagaaggggttggggggttcttgcccccc-agaaaagcagagaaggggtagagacatggagagaaggagttgggggtttcttgccccccagaaaagcagtacttgccgctaagggtgaaggaccaaggcaggcgtccccgcgtggtcagacacctctgaaacgtgggtgagtaatcaggcaggcgtccctgtgtgattaaacaccaagggaagactgtcttcccgagtccgtgaccggcaccggagttttgggtccatggataaaacgcgtctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggaaagattgaagggtggcgccaagattgaaaggacaaagtggttgagggatagtgagagaggttggagaagacagtaagaagaggctacttacccaatttaaacttggtgagatgtttcttgggctggtgggtctgaggacccaaggtcgtaggtggatctttttcacggagcaaagagcaggaggacaggggattgatcttccaagggaggtcccccgatctgagtcacggcaccaaaTTtcatgcgcgtccatgtgaagagaccaccaaaaaggctttgtgtgagcaacatggc-gtttatttcacctgggggcaggcaggttgagtccaaaaagagagtcagcaaagggagatgggggtggggccattttataggatttgggtaggtaaaggaaaattacagtcaaagggggg-ttgttctctggcgggcaggagtgggggtcacaaggtacccagtgggggagcttttgagccaggatgagcc---agaaggaatttcacaagacaatgtcatcagttaaggcaagaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaactggccatctggatgtgtacatgcaggccaca-ggggatatgatggcttagcttgggctcagaggcctgaca i ponAbe2.chr19 I 91533 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47465589 49401 + 50890351 I e papAnu2.chr19 47771990 26121 + 51301725 I e macFas5.chr19 55633181 50971 + 59248254 I e rheMac3.chr19 60529319 28317 + 64156825 I a score=5623.000000 s hg38.chr19_GL949748v2_alt 880575 10 + 1064304 gtctggatca s panTro4.chr19 59821977 10 + 63644993 gtctggatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735893 10 + 60714840 gtctggatct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55684152 10 + 59248254 gtctctatct i macFas5.chr19 I 50971 C 0 s papAnu2.chr19 47798111 10 + 51301725 gtctctatct i papAnu2.chr19 I 26121 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I e chlSab2.chr6 47465589 49401 + 50890351 I e rheMac3.chr19 60529319 28317 + 64156825 I a score=112739.000000 s hg38.chr19_GL949748v2_alt 880585 64 + 1064304 cctgacctggtgatccgcacacctcggcctcccaaagtgctgggattacaggcatgacccactg s panTro4.chr19 59821987 64 + 63644993 cctgacctggtgatccacgcacctcggcctcccaaagtgctgggattacaggcatgacccactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735903 64 + 60714840 cctgacctggtgatccgcccacctcggcctcccaaagtgctgggattacaggcatgacccactg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60557636 64 + 64156825 cctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccacca i rheMac3.chr19 I 28317 C 0 s macFas5.chr19 55684162 64 + 59248254 cctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798121 64 + 51301725 cctgacctcgtgatccgccaacctcagcctcccaaagtgctgggattacaggcgtgagccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47514990 64 + 50890351 cctgacctcgtgatccgcccacctcagcctcccaaagtgcagggattacaggcgtgagccaccg i chlSab2.chr6 I 49401 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103249440 24011 - 106955855 I a score=2247172.000000 s hg38.chr19_GL949748v2_alt 880649 1094 + 1064304 cacctggccTTAGAAAACTTCTTAAATATTAAAATGTATGTTATGTGTATTTTGCCACAATTTTTGAAAAGTACCTTCTGGTGTTtagagacagaagatgagtggttgcctagggccgggagagtgaggggatcgtggtgatgggcagctggtcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactccgtgaataccacaaaatttaaaccattgaattatgcacttttaatgggtaattgtatggcatgtaaattatatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagaagggcggatcacgaggtcaggagatggagaccatcctggctaacatggtgaaaccccatctctact---ttgaaaaaaaa----aaaaaaaaaaaaaagattacccggacgtggtggtgggcacctgtagtcctagctactcaggaggctgaggcaggagaatggcataaactcgggaggcagagcttgcagtgagtcgagattgcgccactcaggaggctgaggcaagagaatggcataaaccccggaggcagagcttgcagcgagccgagattgcgccactgcactccagcatgggtgacagagcaagagtccatctc------aaaaaaaaaaaaaaaa-------------------aGATTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGATTGAATCACGACTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGAG--GGGGGACAGTCCCAGGAATGCTGGTGTGGGCTTAAGGCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaataccttgggaggccgaggcaggtgggaggctgaggcaggCGGATCActggagctcctggagcgaagaaaggatgctagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAGGAggctgggcgtggtggctcatgcctctaatcccagcactttgggaggctgaggcaggtggatcagttgagttcaggagttc s panTro4.chr19 59822051 1020 + 63644993 cacctggccTTAGAAAACTTTTTAAATATTAAAATGTATGTTATGTGTATTTTGCTACAATTTTTGAAAAGCACCTTCTGGTGTTtagagacagaagatgagtggttgcctagggccgggagagtgaggggatcgtggtgatgggcagctggtcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactccgtgaataccacaaaatttaaaccattgaattatgcacttttaatgggtaattgtatggcatgtaaatcatatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatggagaccatcctggctgacatggtgaaaccctgtctctact---ttggaaaaaaa----aaaaaaaaaaaaaagattacccagacatggtggtgggcacctgtagtcctagctactcaggaggctgaggcaggaaaatggcataaacccgggaggcagagctt-----------------------------------------------------------------------gcagtaagctgagattgcgccactgcactccagcatgggtgacagagcgagactctgtctc------aaaaaaaaaaaaaaaa--------------------GATTAGTAATATCCTCTGTGTCACTTACCACTTACGTGATTGAATCACGACTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCTGGTGTGGGCTTAAGGCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaataccttgggaggccgaggcaggtggaAGGTTGAGGCGGGCGGATCAGTGGAGCtcctggagcgaagaaaggatgccagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggctgggcgtggtggctcatgcctctaatcccagcactttgggaggctgaggagggtggatcagttgagttcaagagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735967 1016 + 60714840 tacctggccTTAGAAAACtttttaaatattaaaatttatGTTATGTATATTTTGCCACAGTTTTTGAAAAGTGCCTTGTGGTCTTtagagacagaagatgagtggttgcctaggaccgggagagtgaggggatcatggtgacgggcagctgatcggcatggggttctgaagggcagtgatgacaacattctaaaattagattgtgttgatggttgcaccaactctgtgaataccacaaaatttaagccattgaattgtgcacttttaatgggtaattgtatggcatgtaaattatatctcaacaaagttatATTTTTAAATACCAAAAAAAggccgagtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcagatcatgaggtcaggagatggagaccatcctggctaacatggtgaaaccccatctctact---tt-------aa----aaaaaaaaaaaaaagattacccggacgtggtggcaggtgcctatagtcctagctactccagaggctgaggcaggagaatggcatgaacccgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagattgcgccactgcactcctgcatgggtgacagagcaagactccttctc------aaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAAAAAAGATGAGTAATATCCTCTGTGTCACTTACCACTTAAGTGATTGAATCACGACTCAAAATTCATCATCTGAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCCGGTGTGGGCTTAAGGCTGAACTAAGTAGATCCAgatggctcatacctgtaatcccaataccttgggaggccgaggcaggt-----------------gaatcacttgagctcctggagtgaagaaaggatgctagtggaaaaactggtgaaatcagaataaggtctatagtttTATTTTTTAAAAGAggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcagttgaggtcaggagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103273451 989 - 106955855 CACCTGGCCTTA-AAAACTTTTTAAATATTAAAATTTATGTTATGTATATTTTGCCACAATTTTTGAAAAGTACCTTGTGGTCTTtagagacagaagatgagtggttgcctggggctgggagagtaaggggatcgtggtgatgggcagctgatcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctgtgaataccacaaaatttaagccattgaattatgcacttttaatgggtaattgtatggcatgtaaattagatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacgaggtcaggagatggagaccatcctggctaacatggtgaaaccccgtctctatc---tt----aaaaa----aaaaaaaaaaaaaagattacccggacgtggtggtgtgcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaatctggga-----------------------------------------------------------------------ggcagagcttgcagtgagctgagattgcgccactgcactccagcatgggtgacagagcaagactgcttctc------agaaaaaaaG--------------------------GATTAGTAATATCCTCTGTGTCACTTACCA---AAGTGGTTGAATCATGACTTGAAATTCATCATATCAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCCGGTGTGGGCTTAAGGCTGAATTAAATAGATCCAgatagctcacacctgtaatcccaataccttgggaggccgaggcaggt-----------------ggatcacttgagctcctggagtGAagaaaggatgctagtggaagaactggtgaaatcagaataaagtctacagtttTATTTTTTAAAAGAggctgggtgtggtggcttatgcctgtaatctcagcaatttgggaggctgaggcgggcggatcagttgaggtcaggagttc i nomLeu3.chr10 I 24011 C 0 s rheMac3.chr19 60557700 1008 + 64156825 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggccgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctttgaataccaccaaatctaagccattaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaatcaagttgtatttttaaaTACCAAAAAAAggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatctctact---aaaaaaaaaaattaccaaaaacaaaaaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccgctgcactccagcctgggtgacagagcgagactcattctc-------aaaaaaaaaaaaaaT--------------------GATTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACATGGCTTACAGCCTGTAGATAGGGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAGGCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcctggagCGAagaaaggatgttagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggcacagtgactcatgcctgcaatcccagcactttgggaggccgaggtgggtggataaactgaggtcaggagttc i rheMac3.chr19 C 0 I 228 s macFas5.chr19 55684226 1014 + 59248254 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggctgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctttgaataccaccaaatctaagccattaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaatcaagttgtatttttaaaTACCAAAAAAAggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatctctactaaaaaaaaaaaaaattaccaaaaacaaaaaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgcacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactcattctc----aaaaaaaaaaaaaaaaaT--------------------GATTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACGTGGCTTACAGCCTGTAGATAGGGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAGGCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcCTGGAGCGAagaaaggatgttagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggcacagtgactcatgcctgcaatcccagcactttgggaggccgaggtgggtggataaactgaggtcaggagttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798185 1007 + 51301725 cacctgaacttagaaaactttataaatattaaaattgatattatgtatattttgccacaatttttgAGAAGTACCTTGTGGTCTTTAGAGAgagtagatgagtggttgcctAGGGCCAGGAAAGTGAGGGGATCATGGTGATGGGCAGCTGATGGGCCTGGGGTTCTGAAGGGCAGTGATGACAACATTCTAAAATTAGACTGTGTTGACGGTTGCACCAACTCTTTGAATACCACCAAATCTAAGCCAttaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaataaagttgtatttttaaataccaaaaaaagtccaggtgcagtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatccctact---aaaaaaaaaaatta-caaaaaaaaagaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactcattctc------aaaaaaaaaaaaaaat--------------------gattagtaATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAaattcatcatctcaaacatggCTTACAGCCTGTAGATA-GGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAGGCTGAATTAAATAGATccagatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcctgGAGCGAAGAAAGGAAGttagtggaaaaactggtgaaatcagAATAAagtctatagttttattttttaaaagaggccaggcacagtgactcatgcctgtaatcccagcactttgggaggccgaggtgggcggataaactgaggtcaggagttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515054 1012 + 50890351 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggccgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgatggttgcaccaactctttgaataccaccaaatctaagtcattcaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaataaagttatATTTTTAAATACCAAAAAAAggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccaagacgggcggatcacgaggtcaggagatcaagaccatcctggctaacatggtgaaattccatctctact----aaagaaaaaatta-caaaaaaaaaaaaaaattacctgagtgtggtggtggattcctgtggtcccagctactcaggaggctgaggcaggagaatggtgtgaacctgggaggcggagctt-----------------------------------------------------------------------gcagcgagccgagatcacgccactgcactccggcctgggtgacagagcgagactcgttctcaaaaaaaaaaaaaaaaaaaaaa--------------------GATTAGTAATATCCTCTGTGTCACTTACCGCTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGATA-GGG--ACAGTACCAGGAATGTAGGTGTGGGCTTAAGGCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcCTGGAGCGAagaaaggatgttagtggaaaaaccggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggtacagtgactcatgcctgtaatctcagcactttgggaggccgaggtgggtggataaactgaggtcaggagttc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I a score=364844.000000 s hg38.chr19_GL949748v2_alt 881743 212 + 1064304 gaaaccagcctggccaacttgacgaaaccccatctctactagaaatacaaaaattagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggct-acagagcaagattccatctccaaataagag- s panTro4.chr19 59823071 212 + 63644993 aaaaccagcctggccaacttgacgaaaccccatctctactagaaatacaaaaactagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggcg-acagagcaagactccatctccaaataaGag- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736983 212 + 60714840 aaaaccagcctggccaacttgatgaaaccccatctctactagaaatacaaaaattagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggcg-acagagcaagactccatctccaaaaaaGag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274440 212 - 106955855 aaaaccagcctggccaacttgacaaaatcccatctctactagaaatacaaaaattagctgggcgttgttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttaaacccaggaggcggaggctgtagtgagctgagatcacaccattgcactccaacccgggcg-gcagagcaagactccatctccaaaaaaGag- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55685240 213 + 59248254 aaaaccagcctggccaacgtgacgaaatcccatctctgctagaaatacaaaaattagctgggcgcggttgtgggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggca-acagagcaagactccatctcacaaaaaaaaa i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47799192 213 + 51301725 aaaaccagcctggccaacgtgacgaAATCCCATTtctgctagaaatacaaaaattagctgggcgcggttgtgggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggca-acagagcaagactccatctcacacacacaca i papAnu2.chr19 C 0 I 5 s chlSab2.chr6 47516066 212 + 50890351 aaaaccagcctggccaacatgatgaaaccccatctctattagaaatacaaaaatcagctgggcgcggttgtgggcgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggc--aggttgcagtgagctgagattgcaccactgcactccagcctgggtgtgcagagcaagactccatctcacaaaaaaaaa i chlSab2.chr6 C 0 I 9 e calJac3.chr22 45773030 96928 + 49145316 I e rheMac3.chr19 60558708 228 + 64156825 I a score=557549.000000 s hg38.chr19_GL949748v2_alt 881955 239 + 1064304 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtgaaatttgaataaagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatta-----ataacagaatgtccttggttttgggaaatataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacactttcttcgggg s panTro4.chr19 59823283 239 + 63644993 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtaaaatttgaatacagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatta-----ataacagaatgtccttggttttgggaaatataacctgaagtgattagaggttga-gggcatcatatgcaaattagacacactttcttggggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737195 241 + 60714840 agacatgacaat----taaattgtgtaatcttggattaaatcctaagccaaatatatgtcactggtaaaacaagtggtgaaatttgaattaagtggataggtcagacaatagtgtcacatcagtgctatttcttgatcttgaacatcaataacataacagaatgtccttggttttgggaaatataacctgaagtgattagaggtTTATTTTCATCATATGCAAATTAGACATACTTTTTTGGGGG i ponAbe2.chr19 C 0 I 74 s nomLeu3.chr10 103274652 239 - 106955855 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtgaaatttgaataaagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatcaataacataacagaatgtccttggttttgggaagtataacctgaagtgattaaaggttta-gggcatcatatgcaaattagacatactttttt----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558936 244 + 64156825 agacatgacagttaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacgtttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacatagaagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacacttttttcgggg i rheMac3.chr19 I 228 C 0 s macFas5.chr19 55685461 244 + 59248254 aaacatgacaattaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacgtttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacatagcagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacacttttttcgggg i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47799410 244 + 51301725 agacatgacaattaaataaattgtgtAATCTTGAATTAAATCCTAAACCAAATACATGTCACTGGTAAAACAAGGGGTGACATTTGAATAAAGTGGATAGATCAGACAATAGTGCCATATCAGTGACATTTCTTGACCTTGAACATCAGTAACATAGCAGAATGTCCTTGGTTTTAGGAACTATAACGTGAAGTGATTAGAGGTTTA-GGGCATCATATGCAAATTAGACACACTTTtttggggg i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 47516287 244 + 50890351 aaacatgacaattaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacatttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacagagcagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcacatgcaaatcagacacacttttttggggg i chlSab2.chr6 I 9 C 0 e calJac3.chr22 45773030 96928 + 49145316 I a score=292397.000000 s hg38.chr19_GL949748v2_alt 882194 177 + 1064304 agagagggagagggagagaggctgaatgatgaagcaaatgtggtaaaatgctaactttggggaaatctggatgaagaaattacagat---ttttttttttttt------------atagacagggtaacactctgtcacccaggctagagtgcagtggcacgatcatggctcactgcagcttctacctccct s panTro4.chr19 59823522 189 + 63644993 agagagggagagggagagaggctgaatgatgaagcaaatgtggtaaaatgctaactttgggggaatctggatgaagaaattacagat---ttttttttttttttttttttttttaatagacagggtaacactctgtcacccaggctagagcgcagtggcacgatcatggctcactgcagcttctacctccct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103274891 173 - 106955855 -----gggggagggagagaggctgaatgatgaagcaaatctggcaacatgctaactttggggaaatctggatgaagaaattacagaa---tttttttttttttt-----------agagacagggtaatactctgtcacccaggctagagtgcagtggcacgatcatggctcactgcagcttctacctcact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60559180 176 + 64156825 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaattacagaa-tttttttttttttttt-----------aaagagagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55685705 173 + 59248254 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaattacagaa----ttttttttttttt-----------aaagagagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47799654 174 + 51301725 ----agagagaggaagaaaggctgAATGATGCAGCAAATGGAGTAAAATGCTAACTTTGGGGAAATCTGGATGAAgaaattacagaa---tttttttttttttt-----------aaagacagggtctcactctgtcacctaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47516531 177 + 50890351 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaatcacagaattttttttttttttttt-----------acagacagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacttccct i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56737436 74 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I a score=728062.000000 s hg38.chr19_GL949748v2_alt 882371 310 + 1064304 gggctcagatgaccctctcacctcagcctcccaagtagctgggactataggcgcacagcaccacacctggctaa-tttttgcatttttttttc-ccccaggctcgtctcaagcaatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccagaaattctttaaactatttttgc------------aagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGACAATATTCTTATATTTCTTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGTGGCTGAGGTCTGAGGA s panTro4.chr19 59823711 321 + 63644993 gggctcagatgaccctctcacctcagtctcccaagtagctgggactataggcacacagcaccacacctggctaa-tttttgcatttctttttc-ccc-aggctcatctcaagcaatccacccacctcggcctcccaaagtgctaggattacaggtgtgagccactgcacctggccagaaattatttatactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGACAATATTCTTATATCTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGTGGCTGAGGTCTGAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737510 321 + 60714840 gggctcagatgaccctctcacctcagcctcccaagtaggtgggactacaggcacatagcaccacacctggctaa-tttttgcatgtttttttc-ccc-aggctggtctcaagcaatctacccacctcggcctcccaaagtgctaggattacaggtgtgagccactgcgtctggccAgaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaagctcaaaaTAATAA--AAGACAATATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTGAGGTGTGAGGA i ponAbe2.chr19 I 74 C 0 s nomLeu3.chr10 103275064 316 - 106955855 gggctcagatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctagctaa-tttttgtatatttttctt-ccccaggctggtctcaagcaatccacccaccttggcctcccaaagtgctaggattacaagtgtgagccactgcgcctggccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGATAA------TATATTTATTTGGTGAAGGTAATTATGTTACGGCTGAGAGGGGGGCTGAGGTGTGAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60559356 324 + 64156825 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctgactaattttttgcatttttttttt-ccc-agactggtcccaagcaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCaaaataataataaaaaaaatattCTTCTATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGGTGTGAGGA i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55685878 325 + 59248254 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctgactaattttttgcattttttttttcccc-agactggtcccaagcaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCAAAATAATAATTAAAAAAGTATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGGTGTGAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47799828 324 + 51301725 AGGCTCTGatgaccctctcacctcagcctcccaagtagctgggactacaggcacgcagcaccacacctgactaattttttgcatttttttttt-ccc-agactggTCCCAAGCaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccaGAAATTCTTTAAACtatttttgccagtttttttGTAAGTCTGGAATTATGTCACAATTAAaagctcaaaataataataaaaaaagtattcttatatttatttggtGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGCTGTGAGga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47516708 324 + 50890351 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacgcagcaccacacctgactaattttttgcatttttttttt-ccc-agactggtcccaagcaattcacccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttgaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCAAAATAATAATAAAAAAAGTATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCCAAGAGGGGGGCCCAGGTGTGAGGA i chlSab2.chr6 C 0 I 2 e calJac3.chr22 45773030 96928 + 49145316 I a score=1288.000000 s hg38.chr19_GL949748v2_alt 882681 2 + 1064304 TC s panTro4.chr19 59824032 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737831 2 + 60714840 CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103275380 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55686203 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47800152 2 + 51301725 cc i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47517032 2 + 50890351 I e rheMac3.chr19 60559680 2 + 64156825 I a score=76787.000000 s hg38.chr19_GL949748v2_alt 882683 154 + 1064304 CAGCCTACATAAGTCTCCTCCATAG-AGGGCATCCAAGCGCTCCGTAGGGGGAAGGATAAAGAAAACACCCAGAGTTATGACAGCTGTGTAAGGGGAAACGCCAGCACCGAGTACTGAATCTTCAGTAAATAAGAAGGAGGCGggctgggtgtgg s panTro4.chr19 59824034 154 + 63644993 CAGCCTACATAAGTCTCCTCCATAG-AGGGCATCCAAGCGTTCCATAGGGGGAAGGATAAAGAAAACACCCAGAGTTATGACAGTTGTGTAAGGGGAAACACCAGCACCGAGTGCTGAATCTTCAGTAAATAAGAAGCAGGTGggctgggtgtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737833 155 + 60714840 GAGTCTACATAAGTCCCCTCCATAGAAGGGCATCCAAACGCTCCATAGGGAGAAggataaagaaaacacccagagttatgacagttgtgtaaggggaaacgccagcaccgagtgctgaatcttcagtaaataagaaggagGTGggctgggtgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103275382 153 - 106955855 CAGCCTACATAAGTCTCTTCCATAGAAGGGCATCCAAGCGTTCCATAGGGGGAAGGATAAAGAAAACACCC--AGTTATGACAGTTGTGTAAGGGGAAACGCCAGCACCCAGTGTTGAATCTTCAGTAAATAAGAAGGAGGTCggctgggtgcgg i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47517032 2 + 50890351 I e papAnu2.chr19 47800154 0 + 51301725 C e macFas5.chr19 55686205 0 + 59248254 C e rheMac3.chr19 60559680 2 + 64156825 I a score=884478.000000 s hg38.chr19_GL949748v2_alt 882837 391 + 1064304 tggctcacgcctgtaatcccagcactttgggaggctaaagtgggctgatcacttgaggtcaagagttcgagactagcctggccaacatggggaaaccctgtctctactaaaaatacaaaaattagtcgagtgtggtggcacac----------------------------------gcctgtaatcccagctacttgggaggctagaacaggagaattgcttgaacccaggaggtgaaggttgcagtgagctgagattgcaccactgcaccccagcttgagggacagagtgagattccgtcttaaagagaaaaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTAcagtagtcacatgtatccaccaggatatattccaaggccccagtggatgctgaaaacta s panTro4.chr19 59824188 391 + 63644993 tggctcaagcctgtaatcccagcactttgggaggctaaggtgggctgatcacttgaggtcaagagttcgagactagcctggccaacgtggggaaaccctgtctctactaaaaatacaaaaattagtcgagtgtggtggcacac----------------------------------gcctgtaatcccagctactcggaaggctagaacaggagaactgcttgaacccaggaggtggaggttgcagtgagctgagattacaccactgcaccccagcttgagggacagagtgagattccgtcttaaagagagaaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTAcagtagtcacatgtatccaccaggatatatttcaaggccccagtggatgctgaaaactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737988 423 + 60714840 tggctcaagcctgtaatcccagcactttgggaggctaaggtgggctgatcacttgaggtcaggagtttgagactagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattggtcgagtgtggtggcacacgcctgtaatcccagctactcaggaggttgcacatgcctgtaatcccagctactcgggaggctagaacaggagaattgcttgaacccaggaggtggaggttgcagtgagctgagattgcaccactgcaccccagcttgagggacagagcgagattccatcttaaagag--aaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTACAGTAGTCACATGTATCCATCAggatatattccaaggccccagtggatgctgaaaacta i ponAbe2.chr19 C 0 I 76 s nomLeu3.chr10 103275535 369 - 106955855 tggctcaagcctgtaatcccagcactttgggaggctaagatgggccaatcacttgaggtgaggagttcgagactagcctggccaacatggtgaaaccctgtctctactaaaaa-acaaaaattagtcaagtgtggtggcactc------------------------------------------------------gggaggctagaacaggagaattgcttgaacccaagaggtggaggttgcagtgagctgagattgcaccactgtaccccagcttgagggacagagcgagattccatcttaaagaggaaaaaaaaGGAATTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTG-ACAGTAGTCATATGtatccaccaggatacattccaaggccccagtagatgctgaaaacta i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60559682 390 + 64156825 tggctcacgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccatctactcaggaggctacgacaggagaattccttaaacccaggaggtggaggttgcagtgagctgagatcacaccattgcaccccagtttgagggacagagtgagacgccatcttaaag-aaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATACAACTAGTCATGTAcagtagttacctgtatccaccaggatacattccaaggccccagtgaatgctgaaaacta i rheMac3.chr19 I 2 I 1699 s macFas5.chr19 55686205 390 + 59248254 tggctcatgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccagctactcaggaggctacgacaggagaattccttaaacccaggaggtggaggttgcagtgagccgagatcacaccattgcaccccagtttgagggacagagcaagacgccatcttaaag-aaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATACAACTAGTCTTGTACAGTAGTTACCTGTATCCACCAGGATACATTCCAAGGCCCCAGTGAATGCTGAAAACTA i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47800154 389 + 51301725 tggctcacgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcaagaccagcctggccaatatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccagctactcaggaggctacgaCAGGAGAAttccttaaacccaggaggtggaggttgcagtgagctgagatcacaccattgcaccccagtttgagggacagagcaagacgccatcttaaag--aaaaaaaaaagaattagcacaTTTGTTTGCCCCAAGAAGATACAACTAGTCTTGTACAGTAGTTACCTGTACCCACCAGGATACATTCTAAGGCCCCAGTGAATGCTGAAAACTT i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47517034 391 + 50890351 tggctcacgcctgtaatcccaacactttgggaggccaaggtgagccgatcacttgaggtcaggagttcaagacaagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcgggt----------------------------------gcctgtaatcccagctactcaggaggctacgacaggagaattccttaaacccaggaggtagaggttgcagtgagccgagatcacaccattgcaccccagtttgagggacagagcgagacgccatcttaaagaaaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATAAAACTAGTCTTGTACAGTAGCTACCTGTATCCACCAGGATACATTCCAAGGCCCCAGTGAATGCTGAAAACTA i chlSab2.chr6 I 2 I 853 e calJac3.chr22 45773030 96928 + 49145316 I a score=2823.000000 s hg38.chr19_GL949748v2_alt 883228 13 + 1064304 catagtaccttac s panTro4.chr19 59824579 13 + 63644993 catagtaccttac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103275906 13 - 106955855 catactaccatac i nomLeu3.chr10 I 2 I 4 s macFas5.chr19 55686597 8 + 59248254 CATAGTGT----- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47800545 8 + 51301725 catagtgt----- i papAnu2.chr19 I 2 C 0 e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=1798.000000 s hg38.chr19_GL949748v2_alt 883241 11 + 1064304 atgt--------atatata s panTro4.chr19 59824592 19 + 63644993 atgtgtatatatatatata i panTro4.chr19 C 0 C 0 s macFas5.chr19 55686605 11 + 59248254 --------Gtacatatata i macFas5.chr19 C 0 I 242 s papAnu2.chr19 47800553 11 + 51301725 --------gtgtgtatata i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103275919 4 - 106955855 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=45850.000000 s hg38.chr19_GL949748v2_alt 883252 450 + 1064304 tatgt-atatacatatatacacatat--------------acgtatatgt----------------------atacatac---atgtatatatgcatgtatgtat----atacatatatgcatatatacatacatgtatatatacatg-tatgtatatacatata----tgtatatgtatgtatacacgcatacatgtat------------gtat------acacg----------catatat----gta-tgtatatac------------atatatgtatgtatacacgcata-catgtatg--tatatacatatatgtatgtatacacgcata-catg-tgtgtataca---tatatatgcatgt-atgcat---gtgtgtata----tatacatatatgt----gtatatatacgcatatacat---gtatgtgtatatatgcat----gtgtatatatacatgtacggtactatgcagtatatata-------------cacatatatgtatatatgtatacatatatgtataaatgtatatatgt------------------------gtatatatataaaaggtatatatgtatatatg s panTro4.chr19 59824611 577 + 63644993 tatgt-atatacatatatacatatatgtatatgtgtatatacgtatatgtgtatatatgtatacatgcatgcatacatgc---atgtatatatacatgtgtgtgtgcgcatacatgtatgtatatatgcatgtatgtatatatgcata-catgtatgtgtatata----catatatgtatgtatgcgcgcatacatgtatatgtacatatatgtatgcatgCACACGTGTGTGTGTACATATAT----GTA-TTTATACACGCATGCgtatatatacatgtatgtatacacgcata-catgtgtgcatatatacatgtatgtatatatgcacgcatg-catg-tatatatacg---tatgtatatatgc-acgcat---gcatgtata----tgtatatatacgtacatgtatatgcgcacatatacat---gtatgtgtatatatacatatatgtgtatatatacatgtacggtactatgcagtatatatatgcggtatatatacgcatatatgtatatatgtatacatatatgtataaatgtatatatgtataaatgtataaatgtatatatgtgtatatatataaaaggtatatatgtatatatg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55686858 451 + 59248254 tatataatatatattt-tttatatgt--------------a---atatttttatatatattttta-------atatgtaatatatatataaatat---tatatat-----taaaaatatata-atatttataatattatatataaatattacatataaaaatatataatattatatataaatat-------tacatata-----------------------aaaaa----------tatataatattata-tataaatat-------------------tacatataaaaatatataatat-tatatataaatat-----tacatataaaaatatataatattatatataaatattatatataaatattatatataaaaaatatataatattatatataaatat-----tatatataaaaatatatattatctataaatatataaatat-------tatctataaatatata---------aatatataaa-----taaatatataaatatatataaatatataaatat-tatatataaatatataaatat---------------------------tatatataaaa-atatatataaaac--ta i macFas5.chr19 I 242 C 0 s papAnu2.chr19 47800564 365 + 51301725 tatat-atataaatat-tatatatat--------------a---atatt-----------------------atatataa---atatataaatat---tatatat----ataatattatatataaatatataatattatatataaatattatatataaatatata----aatatatataaacat--------------------------------------ataaa----------tatataa----atattataaacat-------------------tatgtataaatatata-aatat-----tataaacat-----tatatat---attata-aacattatatataaa---tatatataaacactatatat---aaatatata--aatatatataaacat-----tatatataaatatataaat---------atatataaacat-------tatatataaatatata---------aacat------------------------------tatatataaatat-tatatataaatatataa--------------------------------atatataaaatatatatataaaactata i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e nomLeu3.chr10 103275919 4 - 106955855 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=22098.000000 s hg38.chr19_GL949748v2_alt 883702 31 + 1064304 tgtgtatatataAAATGCATGAATTTCTTTT s panTro4.chr19 59825188 31 + 63644993 tgtgtatatataAAATGCATGAATTTCTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103275923 31 - 106955855 tatatatatatATAATgcatgattttttttc i nomLeu3.chr10 I 4 I 30 s macFas5.chr19 55687309 31 + 59248254 tatatatataAaaaacgcatggatttctttt i macFas5.chr19 C 0 I 33 s papAnu2.chr19 47800929 31 + 51301725 tatatatatataaaacgcatggatttctttt i papAnu2.chr19 C 0 I 33 e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=606260.000000 s hg38.chr19_GL949748v2_alt 883733 366 + 1064304 ttcttactgtagatcttaacaacttctgcatagaatttttttttattaagtggagagttagttacttacttaaaagaaATGTTTCTTggctgggtgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggaagattcacttgaggtgaggagttggagaccatcctggccaacgtggtaaaaaccggtctctactaaaagtacaaaaatgagctgggcgtggtgttgggtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccacaaggcagaggttgcagtgagctgagatcacaccactgcaccacagcctgggcaacagagcaagactctg s panTro4.chr19 59825219 363 + 63644993 ttcttactgtagatcttaac---ttctgcatagaatttttttttattaagtggagagttagtaacttacttaaaagaaATGTTTCTTggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggcaggaagattcacttgaggtaaggagttagagaccatcctggccaacatggtaaaagctggtctctactaaaagtacaaaaatgagctgggcgtggtgttaggtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccacaaggcagaggttgcagtgagctgagatcacaccactgcaccacagcctgggcaacagagcaagactctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738487 361 + 60714840 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtgaagaGTTAG----TTACTTAAAAGAAATGTTTCTTggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggtggaaagattcacttgaggtgaggagttcgagaccagcctgggcaacgtggtaaaacccagtctctactaaaagtacaaaaatgagctgggcgtggcgttgagtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacctacgaggcagaggttgcagtgagctgagatcacaccactgcaccgcagcctgggcaacagagcaagactctg i ponAbe2.chr19 I 76 C 0 s nomLeu3.chr10 103275984 359 - 106955855 ttcttaccgtagatcttaacaacttctgcatagaa-ttttttttattaagtggagaGTTAG----TTACTT--AAGAAATGTTTCTTggctgggcgtggtggctcacacctgtaatcccagcactttgggagggtcaggcaggaagagtcacttgaggtgaggagttcaagaccagcctggccaacgtggtaaaacccggtctctactaaaagtacgaaaatgagctgggcatggtgttgggtgtctgtagtgccagctactcaggtggctgaggcaggagaattgcttgaacccacgaggcagaggttgcagtgagccgagatcacaccactgcaccacagcctgggcaacagagcaagactctg i nomLeu3.chr10 I 30 C 0 s rheMac3.chr19 60561771 362 + 64156825 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtg--gagttagttacttacttaaaagaTATGTTTCTTggccgggcgtggtggttcacacctgtaatcccagcactttgggaggccgagacgggaagattgacttgaggtcaggaaatccagaccagcctggccaacgtggtgaaagcccgtctctact-aaagtacaaaaatgagccaggcgtggtgttgggcatctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggcggttgtggggaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i rheMac3.chr19 I 1699 C 0 s macFas5.chr19 55687373 363 + 59248254 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtg--gagttagttacttacttaaaagaTATGTTTCTTggccgggcgtggtggttcacacctgtaatcccagcactttgggaggccgagacgggaagattcacttgaggtcaggaaatcaagaccagcctggccaacgtggtgaaagcccgtctctactaaaagtacaaaaatgagccaggcgtggtgttgggtgtctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggcggttgcagtgaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i macFas5.chr19 I 33 C 0 s papAnu2.chr19 47800993 363 + 51301725 TTCTTACTGTAGATCTTAACAACTTCtgcatagaa-ttttttttattaagtg--GAGTTAGTTACTTACTTAAACGATATgtttcttggccgggcatggtggttcacacctgtaatcccagcactttgggaggccgaggcgggaagattcacttgaggtcaggaaatcaagaccagcctggccaacgtggtgaaaccctgtctctactaaaagtataaaaatgagccgggcgtggtgttgggtgtctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggaggttgcagtgaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i papAnu2.chr19 I 33 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I a score=84314.000000 s hg38.chr19_GL949748v2_alt 884099 75 + 1064304 tctcaaaaaaaaaaaaaaaagaaagaaaaagaaaAAGAAAAGAAATGTTTCTTTTCTTATTAAGTTCTTTAAATG s panTro4.chr19 59825582 75 + 63644993 tctcaaaaaaaaaagaaaaaagaaaaaaaagaaaAAGAAAAGAAATGTTTCTTTTCTTATTAAGTTCTTTAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738848 53 + 60714840 tctcaaaaaaaaaaa----------------------aaaagaaaaGTTTCATTTCTTATTAAGTTCTTTAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276343 47 - 106955855 tctcaaaaa----------------------------aaaagaaaTGTTTCTTTTCGTATTAAGTTCTTTAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562133 64 + 64156825 tctcaaaacaaaaaaaaaa-----------gaaaaagaaaggaaaTGTTTCTTTTCTTATGAAGTTCTTTGAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55687736 64 + 59248254 tctcaaaaaaaaaaaaaaa-----------gaaaaagaaaggaaaTGTTTCTTTTCTTATGAAGTTCTTTGAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47801356 63 + 51301725 tctcaaaaaaaaaaaaaaa------------aaaaagaaaggaaatgtttcttttcttatgaagttttttgaatg i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19987813 51 - 122678785 tttcaaaaaaagaaaaaAA-----------AGAAGGCAAAAAGAATA-------------AAGATTACTTAAAAA i canFam3.chr1 N 0 C 0 e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I a score=404331.000000 s hg38.chr19_GL949748v2_alt 884174 154 + 1064304 AAAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACT-------ATCTTTGAAGAAGTTAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGTATACTGTACACAGAGAAGCCAACGTCAAAACCCCTattttta s panTro4.chr19 59825657 154 + 63644993 AAAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGCATGCTGTACACAGAGAAGCCAACGTCAAAACCCCTattttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738901 154 + 60714840 AAAAGCTTTTCTTTTCACTTTTATTTTAGTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGCATGCTGTACACAGAGAAGCCAACATTAAAACCCCTattttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276390 153 - 106955855 -AAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACC-------GTATTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAGTTGACTTATCCAAGCATATGCATGCTGTACACAGAGGAGCCAACGTTAAAACCCCTattttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562197 152 + 64156825 AAAAGCTTTTCTTTTCACGTTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACGCAGAGGAGCCAGCGTTAAAACCCCTattttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55687800 152 + 59248254 AAAAGCTTTTCTTTTCACGTTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACGCAGAGGAGCCAGCGTTAAAACCCCTattttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47801419 152 + 51301725 aaaagcttttcttttcacgtttattttattgaaacattATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACACAGAGGAGCCAGCGTTAAAACccctattttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47518278 152 + 50890351 aaaaGCTTTTCTTTTCACATTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACACGGAGGAGCCAGCGTTAAAACCCCTattttta i chlSab2.chr6 I 853 C 0 s canFam3.chr1 19987864 142 - 122678785 ----------------AATTGCATTTTGTTGAAACATTGTAAAGATTCTCCAAATCTTTGGAGAACATAGTGTT---ATTTCATTCTGATGAAACCAATTAACTGATCCAATCATATGTATACAAAACAAAGAGGAGCCAAGATTAAACACAAAGTTTTTA i canFam3.chr1 C 0 I 156 e calJac3.chr22 45773030 96928 + 49145316 I a score=1979586.000000 s hg38.chr19_GL949748v2_alt 884328 874 + 1064304 tctttttagattcagcagatacatgtgcaggttttt---tatgagtatattgcatgatgctgaggcttgcattaatgatctagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttagcgctctcacttataagtgagaacatgtggtatttggttttcttttctttt--ttttttttttttttgagatggagtttcactcttgttgcccaggctggagtacaatggcaccatctcggctcactgcaaccttcaccttccaggttcaagcaattctcctgcctcagcctcccgagtagttgggactacaggcatgtgccaccacacccggctaattttgaatttttagtagagacagggtttctgcatgttggtcaggctggtctcgaactcccgacctaaggtgatccacctgcctcagcctcccaaagtgctgggatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcgttctgtggtgtatacatatcacattgtctttatccagtccacctctgatgggacctgggtggattccatgtcttcactattgtgaatcctgctgcaatgaacatacaagtgcatgtgtctttttggtagaatgatttattttcctttggctatatacccagcgatgggattgctgggctgaatggtaactctgtttgtagttctctgaaatatctccaaaccaaactgctttccacagtggctgaactaatttacac--ccaccaacagtgtataagtgtcccctttg s panTro4.chr19 59825811 878 + 63644993 tcttcttagattcagcagatacatgtgcaggttttt---tatgagtatattgcatgatgctgaggcttacattaatgatctagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttagcgctctcacttataagtgagaacatgtggtatttggttttcttttcttttctttttttttttttttgagatggagtttcactcttgttgcccaggctggagtacaatggcaccatctcggctcactgcaaccttcacctcccaggttgaagcaattctcctgcctcagcctcccgagtagttgggactacaggcatgtgccaccacgcccggctaattttgtatttttagtaaagacagggtttctgcatgttggtcaggttggtctcgaactcctgacctaaggtgatccacctgcctcagcctcccaaagtgctgggatgacaggcgtgagccaccgcgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcgttctgtggtgtatacatatcacattgtctttatccagtccacctctgatgggacctgggtggattccatgtcttcactattgtgaatcctgctgcaatgaacatacaagtgcatgtgtctttttggtagaatgatttattttcctttggatatatacccagtgatgggattgctgggctgaatggtaactctgtttgtagttctctgaaatatctccaaaccaaactgctttccacagtggctgaactaatttacactcccaccaacagtgtataagtgtcccctttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56739055 869 + 60714840 tctttttagactcagcagatacatgtgcaggtttttttatatgagtatattgcatgatgctgaggcttgcattaatgatccagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttaacgctctcacttataagtgagaacatgtggtatttggttttct----------ttttttttttttttgagacggagtttcactcttgttgcccaggctggagtacaatggcgccatctcggctcactgcaacctccacctcccaggttcaaacaattctcctgcctcagcctcccgagtagttgggactacaggcatgcgccaccacgcctggctaattttgtatttttagtagagacagggtttctgcatgttggtcaggctggtctcgaacacccgacctcaggtgatccacctgcctcagcctaccaaagtgttgggatgacaggcatgagccaccacatctggccagtatttggttttctgtttctgtgttaacttgcttaggataatggcctccagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcattctgtgctgtatacataccacattgtctttatccagtccacctctgatgggacctgggtggattccatgtctttgctattgtgaatcctgctgcaatgaacacacaagtacatgtgtctttttggtagaatgatttattttcctttggatatacacccagtgatgggattgctgggctgaatggttactctgtttgtagttctctgaaacatctccaaaccaaactgctttccacagtggctgaactaatttacac--ccaccaacagtgtataagtgtcccctttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276543 871 - 106955855 tctttttagattcagcagatacatgcgcaggttttt-tatatgagtatattgcatgatgctgaggcttgcattaatgatccagcc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatggttagcgctctcacttataagtgagaacatgtggtatttggttttcttttttc----ttttttttttttttgagaccgagtttcactcttgttgcccaggctggagtataatggcgccatctcggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagttgggactacaggcatgcaccaccacgcccgggtaattttgtatttttagtagagacagggtttcggcatgttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggatgacaggcatgagccaccgcgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacatgatcttgtgatttttcaaggctgtatagcattccatggtgtatacataccacactgtccttatccaatccacctctgatgggacctgggtggattccatgtctttgctatcgtggatcctgccgcaatgaacatacaagtgcgtgtgtctttttggtagaatgacttactttcctttggatatatacccagtaatgggattgctggactgaatggtaactctgtttgtagttctctgaaatatctccaaaca-----gctttctacagtggctgaactaatttacactcccaccaacagtgtataagtgtcccctttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562349 874 + 64156825 tctttttagattcagcagatacatgtgcagtttttt---aatgagtatattgcatgatgttgaggcttgcactaatgatccagtcacccaagtagtgagcatattaccaaataggtaaattttcaagccttgctcccctccttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg-----------------ttttttttttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccatctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgtctcagcctcccaaagtactggaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataacggcctccagctgcattcatgttgctgcaaaggacataaccttgtgatttttcaaggccctatagcattctgcggtgtatacataacgcattgtctttatccaatccacctctgatgggcactgagttgatgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgaatggtaactctgtttatagtgctctgaaacatctcctaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i rheMac3.chr19 C 0 I 2749 s macFas5.chr19 55687952 875 + 59248254 tctttttagattcagcagatacatgtgcagtttttt---aatgagtatattgcatgatgttgaggcttgcactaatgatccagtcacccaagtagtgagcatattaccaaataggtaaattttcaagccttgctcccctccttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg----------------tttttttttttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccatctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactggaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataacggcctccagctgcattcatgttgctgcaaaggacataaccttgtgatttttcaaggccctatagcattctgcggtgtatacataacgcattgtctttatccaatccacctctgatgggcactgagttgatgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgaatggtaactctgtttatagtgctctgaaacatctcttaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i macFas5.chr19 C 0 I 2795 s papAnu2.chr19 47801571 874 + 51301725 tctttttagattCAGCAGATACATGTGCAGTTTTTT---AATGAGTATATTGCAGGATGTTGAGGCTTGCACTAATGATccagtcacccaagtagtgagcatatTACCAAATAGGTAAATTTTCAAGCCTTGCTCCTCTCcttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg-----------------ttttttatttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccacctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactagaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataatggcctccagctgcatccatgttgctgcaacgGACATAACCTTGTGATTTTTCAAGGCCGTATAGCATTCTGCGGTGTATACATAACGCATtgtctttatccaatccacctcTGATGGGCACTGAGTTGATgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgAATGGTAACTCTGTTTATAGTGCTCTGAAACATCTCctaact-----gctttccacagtggctgaactaatttacacgcCCACCAACAGTATATCAGTGTCCCctttg i papAnu2.chr19 C 0 I 2476 s chlSab2.chr6 47518430 870 + 50890351 tctttttagattcagcagatccatgtgcagtttttt---aatgagtatgttgcatgatgttgaggcttgcactagtgatccagccacccaagcagtgagcatattaccaaataggtaaattttcaagcctcgctcccctccttacccaacgttta--gctctcacttataagtgagaacatgtgg-atgtgg--------------------ttttcttttttagatagagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcactgcaacctccacctcccagattcaagacattctcctacctcagcctcctgagtagctgtgattacaggaatgcgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactggaatgacaggcgtgagccactgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataatggcctccagctgcatccatgttgctgcaaaggacataaccttgtgatttttcaaggccgtatagctttctgtggtgtatacataacgcattgtctttatccaatccacctctgatgggcaccgagttgattccatgtctttcctattgtgactcctgctgtaacaagcatacaagtgcatatgtctttttggtagaatgatttattttcttttggatatatacccagtaatgggatggctgggctgaacggtaactctgtttatagtgctctgaaacatctcttaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i chlSab2.chr6 C 0 I 2237 e canFam3.chr1 19988006 156 - 122678785 I e calJac3.chr22 45773030 96928 + 49145316 I a score=226994.000000 s hg38.chr19_GL949748v2_alt 885202 447 + 1064304 ctccacaatctcaccagcatctgttaatttctggcttttcagtaatggccattctgactggtgtgagatggtattgttgagggataatttaggaatcagagagaccgaggggttgaggaggatttattattattattattatttaggtgcaccggccccagtcagattaacatccaaaaagactgaggctcgaacagagagtccggttaccttttaagcattttgtggggttgggggagatctgtgcagggggaagcatattacagaagcaagaaacaaaggcagttattcaattgagacatgcatcacattattccttacttttcaa-gaaaaatatgttttacgacttgaggttatcctgtctagtgatcttgcagccgcacggcaagagaaacagggtcttcacaatgcctgggaaagggagagataaggctcactagccacaga s panTro4.chr19 59826689 447 + 63644993 ctccacaatctcaccagcatctgttaatttctggcttttcagtaatagccattctgactggtgtgagatggtattgttgcgggataatttaggaatcagagagaccgaggggttgaggaggatttcttcttattattattatttaggtgcaccggccccagtcggattaacatccaaaaagactgaggctcgaacagagagtccggttaccttttaagcattttgtggggtggggggagatctgtgcagggggaagcatattacagaagcgagaaacaaagacagttattcaattgagacatgcatcacattattccttacttttcaa-gaaaaatatgttttacgacttgaggttatcctgtctggtgaccttgcagctgcacggcaagagaaacagggtcttcacaatgcctgggaaagggagagataaggctcactagccacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56739924 443 + 60714840 ctccacaatctcgccagcatctgttaatttctgacttttcactaatagccattctgactggtgtgagatggtatTtttgcaggataatttaggaatcagagagaccgaggggttgaggaggat---ttattattattattatttaggtgcaccgg-cccagtcagattaacatccaaaaag-ctgaggcccaaacaaagagtccggttaccttttaagcattttgtggggccgggggagatctgtgcagggggaagcatattacagaagcaagaaacaaagacagttattcaattgagacatgcattacattatttcttacttttcaaggaaaaacatgttttacgacttgaggttatcctgtctagtgaccttacagctgcacagcaagagaaacagggtgttcacaatgcctggaaaagggagagataaggctcactagccacaga i ponAbe2.chr19 C 0 M 475 s nomLeu3.chr10 103277414 444 - 106955855 ctccacaatctcgccagcatctgttaatttctgacttttcagtaatagccattctgactggtgtgagatggtattgttgcgggatagtttaggaatcagagagaccgaggggttgaggaggat---ttattattattattatttaggtgcaccgg-cccagtcagattaacatccaaaaagactgaggcccgaacaaagagtccagttaccttttaagcattttgtcgggcggagggagatctgtgcaagtggaagcatattacagaagcgagaaacaaagatagttattcagttgacacatgcattacattatttcttacttttcaaggaaaaacatgttttacgacttgaggttatcctgtctagtgatcttgcagctgcacagctagagaaacagggtcttcgcaatgcctgggaaagggagagataaggctcactagccacaga i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47519300 2237 + 50890351 I e papAnu2.chr19 47802445 2476 + 51301725 I e macFas5.chr19 55688827 2795 + 59248254 I e rheMac3.chr19 60563223 2749 + 64156825 I a score=24847.000000 s hg38.chr19_GL949748v2_alt 885649 98 + 1064304 cagaaaaacaggcagttcatgtttaaaggactccacctctttctcttcctcggggggaactgggttttcttaaatacaactgagtttttgtttacaca s panTro4.chr19 59827136 98 + 63644993 cagaaaaacaggcagtgcatgtttaaaggactctacctctttctcttcctccgggggaactgggttttcttacatacaactgagtttttgtttacaca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103277858 98 - 106955855 cagacaaacaggcagttcatttttaaaggactccacctctttctcttcctcagggggaattgggttttcttacatacaactgagtttttgttcacaca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M e calJac3.chr22 45773030 96928 + 49145316 I e chlSab2.chr6 47519300 2237 + 50890351 I e papAnu2.chr19 47802445 2476 + 51301725 I e macFas5.chr19 55688827 2795 + 59248254 I e rheMac3.chr19 60563223 2749 + 64156825 I a score=250576.000000 s hg38.chr19_GL949748v2_alt 885747 146 + 1064304 ttctgtaatttcttttaattcctgttccagtatctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACAACTTCCCACAGTCAGCTCTGGGTACGACCTCCACATTGCAGAATT s panTro4.chr19 59827234 146 + 63644993 ttctgtaatttcttttaattcctgttccagtttctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACAACTTCCCACAGTCAGCTCTGGGTACGACATCCACATTGCAGAATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103277956 146 - 106955855 ttctttaatttcttttaattcctgttccagtatctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACGACTTCCCACAGTCAGCTCCAGGCACGACCTCCACATTGCAGAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60565972 146 + 64156825 TTCTTTAATTTCTTTTCATTCCTGTTCCAGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCGGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACCGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i rheMac3.chr19 I 2749 C 0 s macFas5.chr19 55691622 146 + 59248254 ttctttaatttcttttcattcctgttccaGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCGGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACCGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i macFas5.chr19 I 2795 C 0 s papAnu2.chr19 47804921 147 + 51301725 ttctttaatttcttttcattcctgttcCAGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCAGGGGGTTTCCTCTTTTGCGTCATTAGGCCTGACTTCTCACGGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i papAnu2.chr19 I 2476 C 0 s chlSab2.chr6 47521537 146 + 50890351 ttctttaatttcttttcattcctgttccaGTATCTCACTGTGAAATTCCCTGTGTTTTTATATGATTCTCAGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACGGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i chlSab2.chr6 I 2237 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M e calJac3.chr22 45773030 96928 + 49145316 I a score=2800.000000 s hg38.chr19_GL949748v2_alt 885893 1 + 1064304 G s panTro4.chr19 59827380 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103278102 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566118 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691768 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805068 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521683 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45869958 1 + 49145316 G i calJac3.chr22 I 96928 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M a score=246493.000000 s hg38.chr19_GL949748v2_alt 885894 93 + 1064304 AGAAGTTGACCCAGAAATGCATTTTGGGCTGAGCAGACAATTGTCAGAGTTGCTGGCTAGACCA----------CAGATGTGTCAGAGGGACCACGGCCTTTC s panTro4.chr19 59827381 93 + 63644993 AGAAGTTGACCCAGAAATGCATTTTGGGCTGAGCAGACAATTGTCAGAGTTGCTGGCTAGACCA----------CAGATGTGTCAGAGGGGCCGTGGCCTTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103278103 93 - 106955855 AGAAGTTGACCCAGAAATGCATTTCGGGCTGAGCAGACAATTGTCAGAGGAGCTGGCTAGGCCA----------CAGCTGTGTCAGAGGGCCTGTGGCCTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566119 93 + 64156825 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGGGGAGCTGGCTAGACCG----------CGGATGTGTCAGAGGGACCATGGCCTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691769 93 + 59248254 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CGGATGTGTCAGAGGGACCATGGCCTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805069 93 + 51301725 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CAGATGTGTCAGAGGGACCATGGCCTTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521684 93 + 50890351 AGAAGCTGACCCACAAATGCATTTCGGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CAGACGTGTCAGAGGGACCATGGCCTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45869959 93 + 49145316 AGAAGTTGACCCAGAAATGTATTTCAGGCTGAGCAGAAAGTGGTCAGGGGAGCTGGCTAGACCA----------CAGCTGTGTCATAGAGACCATGGCCTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19988162 103 - 122678785 AGAAGTGAACCCTGAGATGAGTCTCAGGTGAGGCAGACAATTGTCAGAGGATCTGGTTAGACCACAGAGATGATCAGATATGTCATAGGGACCATGATTTGTC i canFam3.chr1 I 156 C 0 e ponAbe2.chr19 56740367 475 + 60714840 M a score=2648712.000000 s hg38.chr19_GL949748v2_alt 885987 804 + 1064304 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAGCAGTCAACGTGAAAGCGCTCTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGTATCTATCTCC----CTGGCCCGCCCGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTGGCGTGGAAGGGGAATGGGATCACGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGTCAGAGGATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTCCGGGTTCAGGCCAAGCTCCT-TCCACCCAAGCACGGCTGGGGAGA-GGGGACA-GGGTGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGTGGAGCCTAAGGTTGGGGGGAGGGGGCTCCGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGACAGACCAAAACCCCCTGAGCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCATGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGTAACAGG----TAACTGT s panTro4.chr19 59827474 800 + 63644993 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAGCAGTCAACGTGAAAGCGCTCTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGTATGT----CC----CTGGCCCGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTGGCGTGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGGATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACCCTTCCTGGTTCAGGCCAAGCTCCT-TCCACCCAAGCACGGCTGGGGAGA-GGGGACA-GGGTGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGGGGAGCCTAAGGTTGGGGGGAGGGGGCTCCGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGCGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGACAGACCAAAAGCCCCTGAGCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCATGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56740843 800 + 60714840 TGTAAGCTCATGGTCAGAGGGCGGA-GGGGTGTTGTGAGCGTTCTGATGAAAACAGTCAACATGAAAGCGC-CTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCTGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTTGAATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGGATCAGCACCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTGGGGTTCAGGCCAAGCTCCC-TCTACCCAAGCACAGCTGGGGAGA-GGGGGCA-GGATGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGTGGAGCCTAGGGTTGGGGGGAGAGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGCGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAGGCCTTTTTGCCGTGGAGAGACCAAAACCCGCTGAACGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCACAGCAGGGCAATACAGCTGCATCTATAGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACGTGCTGGATGTGGTGGTAACAGG----TAACTGT i ponAbe2.chr19 M 475 C 0 s nomLeu3.chr10 103278196 805 - 106955855 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAAAAGTCAACATGAAAGCGCTTTGGTGATGGGCGCTGGTG---TTCATCCAACCACTTCCTGTGCATCT----CCCCGTCCGTCCAGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCAATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTCCGGGTTCAGGCCAAGCTCCC-TCCACCCAAGCACGGCTGGGGAGA-GGGGGCA-GGGTGCTGGCTTCCCAGGAGGGCTTGGGGCCAGCAGCTGGGTGGAGCCTAGGATTCCGGGGAGGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACTATCTGCTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCCCCTGAACGGATTAACAAAGTCAAATTCTACATCCTGGCCATGAACTCCCGCACGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTGGCTGGATCTGGTGGTAACAGG----TAACTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566212 807 + 64156825 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCAGCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGTCTTCCACGCTCCGTGCCCTGCTCTGCCTTGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCAAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGAGGGGGGCG-GGGTGCTGGCTTCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTATGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCTGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691862 807 + 59248254 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCAGCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCCATGCCCTGCTCTGCCTTGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCAAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGAGGGGGGCG-GGGTGCTGGCTTCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTATGGTTGGGGGGATGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCTGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805162 806 + 51301725 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCCGTGCCCTGCTCTGCCTCGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCGAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCG-TCCACCCAAGCACAGCTGGGGAGA-GGGGGCG-GGGTGCTGGCTCCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTACGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCCATCATCAGGGCCGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521777 810 + 50890351 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGTGATGGGCGCTGGGG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCTGTGCCCTGCTCTGCCTCGGTGAGTTCTTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTTTGAGCCAGAGAATCAGCACCCCGAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGA-GGGGGCG-GGGTGCTGGCTTTCCAGGAAGGCCTGGGGCCAGCAGCAGGGTGGAGCCTACGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCCGAATCCACTTACATGGTTCCAAAGGAAAAGCAAGCAACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGGCCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGGTAACTAACTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45870052 789 + 49145316 TGTAGGCTCACGGTCAGA-GGTGGA-GGGGAATTGTGAA-GTTCTTATGAAAAAAGTCAACGTGAAAGCCACATGGTAATGAGGGTTGGC----CTCATCT-ACCACTTCCTCTGCATCT----CC----CTGGCACACTGGGCTCAGTCACTACCCCACT------------GCCAGCAGAATCTGAGCGATGCCTTCCACACTCCCTGCCCTGCTCTGCCTCGGTGAGTTCTTGCCCGGATGGGGAATGGAATCAGGGTGTGCCTGGGAA-------GCAATAGGTCTCATTATTCCCATCTTGCAGGGCTGTGTCTGAGCCAGAGGATCAGCACCCAGCAGCGTGAGTCCTTCCTTCAAAGCT-TAGGGTCACTCTTACGGGTTCAGGCCAAGCACCC-TCCACCCAAATACAACTGGGAAGA-GGGGACA-GGGTGCGGGCTTCCCAGGAGGACTTAGGGCCAGCAGCTGGGTGGAGCCTAGGGT--GGGAAGGTGGGCTCAGCTGGGACTCCAGCATCTGATTCCCTTCCAGAGACTCTCCCAAAACCCTCCATCTGGGCCAAGCCCAGTTTCATGGTTCCAAAGGAAAAGCCGGCGACCATCTCTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAAGTCTTTCTGCCGTGGAGAGACCAAAACCCCCTGAGCGCATTAACAAAGTAGAGTTTCACATCCCGGCCATGACGTCCCGCACGGCCGGGCGATACAGCTGCTTCTATCGGGTTGGGGAGCTCTGGTCAGAACCTAGCGACTCACTGGATCTGGTGGTAACAGG----TAAGTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19988265 793 - 122678785 -------TCATGGTCAAA--GTACAGGGAAGACTGTGAGCCTTCTTAT--AAAAAGTCAGTGTGAAAGCCCCATGTCAAATAGTGTTGTTGGGCTTCACCC-ACCACATCCTGTGCA-CT----TA----CTGGCCTGCTGGGCTCAGTCTCCACTCAGCTCCTCCATATGTGCCTGGTATAATCAGTGCTATGACCTCTACACTCACTGCCCTTCTCTTCCTTGGTGAGTTCTTGCACACAGGGGAAACAGAATTCGGGAGT--CTGGGTGTGGGTGAGCGGCATGTCTCATTGTTCCTGTCTTCCAGGGCTGTACCTGAGCCAGACCACCAGCACCCAGAAGCGTGAGTCCCTTCTTCAGAGCCTCAGAATCTCTCTTCTGGGCTCAGATGCAGTATCTATCTATGAAACCAAAG-------GA-GGGGGCAGGGGCTCTGGTTTGCTAGGAGGGCTTGAGGCCAACA---GGGTAGAAATTTGCGT---GGGAAGGGACTTTATCTGGAACTCCAGCCTCTGATTCTCTTCCAGAGATTCTTTCAAAACCCATCATCTGGGTCAAGCCAAATTTCATGATTCCAAAGGGAATGCCAGTGTTGATCTGGTGCCAGGGGACTCCTGAGGCCATTGAATATCAGCTGCATCTTGAAGGACATCTCTATGCCCAGCAGAGCCCAAAACAACTTGAAAGGAGGAACACAGTCATGTTCCGCATCCCAAAAATGACCCTGCTCACTGCAGGGCAATACAGGTGCTTTTACCGAATCAAGGAGCTCTGGTCAAAGCCTAGTGACCCTCTGGATCTGGTGGTAACAGG----TAACTAT i canFam3.chr1 C 0 I 83 a score=457445.000000 s hg38.chr19_GL949748v2_alt 886791 166 + 1064304 CCGGTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATGCAGCATCATCTATGAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGCTGGAAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACCGTGTC s panTro4.chr19 59828274 164 + 63644993 CCGGTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATGCAGCAGCATC--TGAACTCTTCCAAGCCCCACTCAGACACTGTTTGTCTCGGTAGGAGGCTGGAAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACCGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741643 163 + 60714840 CCGCTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATACAG---CATCTATGAACTCTTCCAAGCCCCACTCAAACGCTGCTTGTCTCGGTAGGAGGCTGGGAGGAGGGGTGATCCCCATCACAGTCCTTGCCTACAAGGGGTTGTCTGCAGACGGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279001 166 - 106955855 CCGGTTCTCTAACTGGAGAGTGATCTCCGTCTGCATCCGGGATGGAGCATCATCTATGAACTCTTCCAAGCCCCATTCAGACCCTGCTTGTCTCGGTAGGAGGCTGGGAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACAGTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567019 165 + 64156825 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCGGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCCCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692669 165 + 59248254 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCAGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCCCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805968 165 + 51301725 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCGGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCGCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522587 164 + 50890351 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCTGGGATGGAGCATCACCTATGAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCAGTAGGAGGTTGG-AGGAGGGGTGATCC-CATCACAATCTCAGCCTACAAGGCGTTGTCTGCAAACAGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45870841 164 + 49145316 CCCGCTCCGTAACTGGAGAGTCAGCTCAGTCTACCGCCGGGATGGAGCCTCATCTATTAACTCTTCCAAGCCCCACTCAGACGCTGCTTCTCTCGGAAGGAGGTTGGGTGGACGGATG-TACTCATCAC-GTCCCTGCCTACAAGGGCTTGTCTGCAGACAGCGTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19989058 83 - 122678785 I a score=146029.000000 s hg38.chr19_GL949748v2_alt 886957 42 + 1064304 TCTACGTCCTAGGAGCAGATGTGTCCTCAGTCAGTTTCTCCA s panTro4.chr19 59828438 42 + 63644993 TCTACATCCTAGGAGCAGATGtgtcctcggtcagtttctcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741806 42 + 60714840 TCTACGTCCTAGGCGCAGATGTGTCCTCAGTCAGTTTCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279167 42 - 106955855 TCTATGTCCTAGGAGCAGATGtgtcctcggtcagtttctcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567184 42 + 64156825 TCTATGTCCTATGAGCAGATGtgtcctcggtcaagttctcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692834 42 + 59248254 TCTATGTCCTATGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806133 42 + 51301725 TCTATGTCCTACGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522751 42 + 50890351 TCTGTGTCCTACGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871005 42 + 49145316 TCTATGTCCTAGCAGCAGATGtgtcctcggtcaagttctcca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19989141 42 - 122678785 TCTATGACCTAGAGGCAGATTTGTCATAGGTCAGGTTCTCCA i canFam3.chr1 I 83 I 1526 a score=977276.000000 s hg38.chr19_GL949748v2_alt 886999 359 + 1064304 TGACACAGATTCTGAGATAGATATTTGTATGCAGGGGTATGACTGAGGAATGTCCTCAAAAACAATGCCTGTGGGCTAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGttt---------tttttttttttatctgttttgagacggagtttcgctcttgtcacccaggctggagtgcagtggtgcaatctccagtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggatcacaggcacccaccactac-----gccacattttgtatttttagtagagatggggtttcaccatgttggccagggtggtgtcgaactcctgacc s panTro4.chr19 59828480 359 + 63644993 agacacagattctgagatagatatttgtgtgcaggggtatgactgaggaatgtcctcaaaaacaatgcctgtggGCCAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGGtt---------tttttttttttatctgttttgagacggagtttcgctcttgtcacccaggctggagtgcagcggtgcaatctccagtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcacccaccactac-----gccagattttgtatttttagtagagatggggtttcaccatgttggccagggtggtctcgaactcctgacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741848 338 + 60714840 AGACACAGATTCTGAGATAGATATTTGTGTGC-------------AGGAATGTCCTCAAAAACAACGCCTGTGGGCCAGGCGCAGTGGCTTACAC--TGCTTCCCTCACCCATCACAGGTGTT-GGAG---------------ttttttaatctgttttgagacggagtttcactcttgtcacccaggctggagtgcagtggtgcaatctccagtcactgcaacctccacctcctgggttcaagcgattctccagcctcagcttcccaagtagctgggattacaggcacccaccaccat-----gccagtttttgtatttttagtagagatggggtttcaccatgttgaccagggtggtctcaaactcctgacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279209 353 - 106955855 agacatagattctgagatagatatttgggtgcaggggtataactgaggaatgtcctcaaaaacaacacctgtggGCCAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG--------------ttttttttatctgttttgagatggagtttcgttcttgtcacccaggctggagtgcagtggtgcaatctccagtcact-caacctccacctcctgggttcaagcgattctccagcctcagcttcccaagtagctgggattacaggcacccaccaccat-----gccagtttttgtatttttagtagagatggggtttcaccatgttggccagggtggtctcgaactcctgacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567226 352 + 64156825 agacacagattctgagatagatatttgtgtgcaggggtatgactgaggaacgtcctcaaaaacaacgcctgtggGCCAGGCGCAGTGGCTAACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaacttctgacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692876 352 + 59248254 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTATGACTGAGGAACGTCCTCAAAAACAACGCCTGTGGGCCAGGCGCAGTGGCTAACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagcagctgggattacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806175 351 + 51301725 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTATGACTGAGGAATGTCCTCAAAAACAACGcctgt-ggccaggcgcagtggctaacacTTTGCTTCCCTCACCCATCACAGGTGGT-gggg---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcgaccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522793 350 + 50890351 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTGTGACTGAGGAACGTCCTCAAA---AACGCCTGTGGGCCAGGCGCAGTGGCTGACACTTTGCTTCCCTCACCCATCACAGGTGGTGGGGG---------------tttttgtgtttgttttgaga-ggagtttcactcttgtcacccaggttggagtgcagtggtgcagtctcccgtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtggctgggatgacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871047 370 + 49145316 agaaacagattctgagatagatatttgtgtgcaggagggtgactgacaaatgtcctcaacagcatcgcctgtggGCCAGGCGCAGTGGCTTAGGCCTTGCTTTCCTCATCCATCACAGGTGAT-GGGTTTAAAAAAATATATTTTGGCtttttttttttcaga--cagtcttgctctgctc-cccaggctggagtgcagtggtgcaatctcagctcactgccacctctacctcctggattcaagcaattatcctgcctcggtctcccaagtagttgggactacaggcacctgccaccatgtctggctaatttttgcatttttagtagggatgggatttcaccatgtcagccaggctggtctcgaactcctgacc i calJac3.chr22 C 0 I 487 e canFam3.chr1 19989183 1526 - 122678785 I a score=201021.000000 s hg38.chr19_GL949748v2_alt 887358 92 + 1064304 tcagatgatccgcccgcctcaccctcccaaagtgctgggattacaggtgtgagccatcacacccagccAGGTGGTGGTTTTCTaaaaaa-----aaa s panTro4.chr19 59828839 92 + 63644993 tcagatgatccgcctgcctcaccctcccaaagtgctgggattacaggtgtgagccatcgcgcctagccAGGTGGTGTTTTTCTAAAAAA-----AAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742186 92 + 60714840 tcagatgatccgcctgcctcaccctcccaaagtgctgggattacaggtgtgagccattgcgcccagccAGGTGGTGGTTTTCTAAAAAA-----AAA i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103279562 87 - 106955855 tcagatgatccgcccgcctcaccctcccaaagtgctgggattacaggtgtgagccatcgcgcccagccAGGTGGTGTTTTTCTAAAA---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567578 94 + 64156825 tcaggtgatcctcccgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgcgcctggccAGGTGGTGTTTTTCTAAAAAACAAAA--- i rheMac3.chr19 C 0 I 611 s macFas5.chr19 55693228 89 + 59248254 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806526 88 + 51301725 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagcc-tcacACCTGGCCAGGTGgtgtttttctaaaaaa-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523143 89 + 50890351 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagtcatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I a score=546.000000 s hg38.chr19_GL949748v2_alt 887450 2 + 1064304 aa s panTro4.chr19 59828931 2 + 63644993 AA i panTro4.chr19 C 0 I 6 s nomLeu3.chr10 103279649 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e chlSab2.chr6 47523232 0 + 50890351 C e papAnu2.chr19 47806614 0 + 51301725 C e macFas5.chr19 55693317 0 + 59248254 C e rheMac3.chr19 60567672 611 + 64156825 I a score=19961.000000 s hg38.chr19_GL949748v2_alt 887452 24 + 1064304 aaaaaaTTAGCTTTTTTTTTTTTT s nomLeu3.chr10 103279651 24 - 106955855 AAAAATTTAGCttttttttttttt i nomLeu3.chr10 C 0 I 116 s macFas5.chr19 55693317 24 + 59248254 CAAAATTTAGCttttttttttttt i macFas5.chr19 C 0 I 502 s papAnu2.chr19 47806614 24 + 51301725 caaaatttagcttttttttttttt i papAnu2.chr19 C 0 I 498 s chlSab2.chr6 47523232 24 + 50890351 CAAAATTTAGCttttttttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=91.000000 s hg38.chr19_GL949748v2_alt 887476 1 + 1064304 A s chlSab2.chr6 47523256 1 + 50890351 a i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=0.000000 s hg38.chr19_GL949748v2_alt 887477 1151 + 1064304 ACaatatggttgtttattattattatcaagtattatacatagttacatatacatacataattgtatgtgctatacaattaggtttgtttataccagcaacaccaaaaacacatgagcaatactttgtgctaggaaggctatgatgtcatcaggcaataggaatttttcagtttcattataatcttatgggaccaccatcatatatgtggtacattgttggccaaaatgtcattatgcagctcacaacAGtatttcatgtccattcaaatatcttcttttgtgaaatgtctatttaaatcttttgcctatttttaaattgggttgcttatattttgattgattaggaaaagttatttctatattctgtgtcatatacttgtgttgaaatatatatattttttgtctgtgccttttcatttgctcagggtctttggaccttgtttggaggttctggcaggggaacacagctactcatttattcttTTttttttaatttttttagtatttattgatcattcttgggtgtttctcggagagggggatttggcagggtcataggacaatagtggagagaaggtcagcagataaacatgtgaacaaaggtctctggctttcctaggcagaggtccctgcggccttccgcagtgtttgtgtccctgggtacttgagattagggagtggtgatgactcttaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacatagcacatgtttcagagagcacggggttgggggtaaggtcatagattaacagcatcccaaggcagaagaatttgtcttagtacagaacaaaatggagtctcctatgtctacttctttctacacagacacagtaacaatctgatctctctttcttttccccacatttcccctttttctattcgacaaaaccgccatcgtcatcatggcccattctcaatgagctgttgggtacacctcccagacggggtggcggccgggcagaggggctcctcacttcccagacggggcggccgggcagaggcgcccccccacctcccagacggggcagtggccgggcgggggctgccccccaacctcccggacggggcggctggccggg e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=655.000000 s hg38.chr19_GL949748v2_alt 888628 7 + 1064304 gcttttt s ponAbe2.chr19 56742282 7 + 60714840 GCttttt i ponAbe2.chr19 I 4 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=3332.000000 s hg38.chr19_GL949748v2_alt 888635 13 + 1064304 ttttttttttttg s panTro4.chr19 59828939 13 + 63644993 ttttttttttctg i panTro4.chr19 I 6 C 0 s ponAbe2.chr19 56742289 13 + 60714840 ttttttttttttg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=30025.000000 s hg38.chr19_GL949748v2_alt 888648 56 + 1064304 agacagtctcgctgcagtgcagtggtacaatctcagctcactgcaacctc--tgcctc s panTro4.chr19 59828952 58 + 63644993 ggacagtctcgctgcagtgcagtggtgcaatctcagctcactgcaacctcactgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742302 56 + 60714840 agacagtctcgctgcagtgcagtggtgcaatctcagctcactgcaacctc--tgcctc i ponAbe2.chr19 C 0 I 14 s chlSab2.chr6 47523257 56 + 50890351 agacagtctcgctgcagtgcagtggtacaatctcagctcactgcaacctc--tgcctc i chlSab2.chr6 C 0 I 14 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=-172.000000 s hg38.chr19_GL949748v2_alt 888704 8 + 1064304 --agcctcaa---- s panTro4.chr19 59829010 14 + 63644993 ccaggttcaagcaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742358 14 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523313 14 + 50890351 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=64852.000000 s hg38.chr19_GL949748v2_alt 888712 124 + 1064304 ttctcctgcctcagcctcccaagtagttgagattacaggcatgtgccaccacacccggctaatttttgcatttttagtagagacggggtttcaccatgttgaccaggctggtctcaaactcctg s panTro4.chr19 59829024 124 + 63644993 ttctcctgcctcagcctcccaagtagttgggattacaggcatgggccaccacacccggctaatttttgcatttttagtagagacggggtttcaccatgttgaccagtctggtctcaaactcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742372 124 + 60714840 ttctcctgcctcagcctcccaagtagttgcaattacaggcatgggtcaccacacccggctaatttttgcatttttagtagagacagggtttcaccatgttgaccaggctggtctcaaactcctg i ponAbe2.chr19 I 14 C 0 s chlSab2.chr6 47523327 124 + 50890351 ttctcctgcctcagcctcccaagcagttgggtttacaggcataggccaccacgcctggctaatttttgcatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctg i chlSab2.chr6 I 14 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=88498.000000 s hg38.chr19_GL949748v2_alt 888836 94 + 1064304 acccaggaggtcgagtcttcagtaagcaaagatagtgccacggcgctccagcctgggaaacagagcaagaccctgtatc---------atttttaaaaaTGGT s panTro4.chr19 59829148 94 + 63644993 acccaggaggtcgaggcttcagtaagccaagatagtgccacggcgctccagcctggggaacagagcaagaccctgtatc---------aTTTTTTAAAATGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742496 89 + 60714840 acccaggaggttgaggcttcagtaagccaagatagtgccacggcgctccagcctggggaacacagcaagaccctgtatc---------attttaaaaa----- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55693843 100 + 59248254 acccaggaggtagaggttgcagtgaaccgagattgtgccattgcactccagcctgggtgacagagcaagactccatctc---aaaaaaaaaaaaacaaaTGGT i macFas5.chr19 I 502 C 0 s papAnu2.chr19 47807136 103 + 51301725 acccaggaggtagaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacagagcaagactccgtctcaaaaaaaaaaaaaaaaaaaatggt i papAnu2.chr19 I 498 C 0 s chlSab2.chr6 47523451 94 + 50890351 acccaggaggtcgaggcttcagtgagccaagatagtgccatggcactccagcctggggaacagagcgaggccctgtacc---------attttaaaaaaTGGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e rheMac3.chr19 60567672 611 + 64156825 I a score=73732.000000 s hg38.chr19_GL949748v2_alt 888930 48 + 1064304 TTTAGACGGTAAATCTTCTATTGTGTGTATTTGACCaaaataataatt s panTro4.chr19 59829242 48 + 63644993 TTTAGATGGTAAATCTTCTATTGTGTGTATTTGACCAAAATAATAATT i panTro4.chr19 C 0 I 8 s ponAbe2.chr19 56742585 36 + 60714840 -----aCGGTAAATCTTCTATTGTGTGTATTTGACCaaaaa------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568283 48 + 64156825 TTTAGATGGTAAATCTTCTATTGTGTGTATTTGACCaaaataataata i rheMac3.chr19 I 611 I 3 s macFas5.chr19 55693943 47 + 59248254 -TTAGATGGTAAATCTTCTATTGTGTGTATTTGACCAAAATAATAATA i macFas5.chr19 C 0 I 555 s papAnu2.chr19 47807239 47 + 51301725 -ttagatGGTAAATCTTCTATTGTGTGTATTTgaccaaaataataatt i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47523545 47 + 50890351 -TTAGATGGTAAGTATTCTATTGTGTGTATTTGACCAAAATAATAATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I a score=4095.000000 s hg38.chr19_GL949748v2_alt 888978 3 + 1064304 aaa s panTro4.chr19 59829298 3 + 63644993 aaa i panTro4.chr19 I 8 C 0 s ponAbe2.chr19 56742621 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568334 3 + 64156825 aaa i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55694545 3 + 59248254 AAA i macFas5.chr19 I 555 C 0 s papAnu2.chr19 47807295 3 + 51301725 aaa i papAnu2.chr19 I 9 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523592 0 + 50890351 C a score=14847.000000 s hg38.chr19_GL949748v2_alt 888981 10 + 1064304 a----aaaaaa------aaa s panTro4.chr19 59829301 10 + 63644993 a----aaaaaa------aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742624 10 + 60714840 a----aaaaaa------aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568337 10 + 64156825 a----aaaaaa------aaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694548 10 + 59248254 A----AAAAAA------AAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807298 10 + 51301725 a----aaaaaa------aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523592 20 + 50890351 ATTTTAAAAAATTTTTTAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871904 10 + 49145316 a----aaaata------caa i calJac3.chr22 I 487 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e nomLeu3.chr10 103279675 116 - 106955855 I a score=542563.000000 s hg38.chr19_GL949748v2_alt 888991 217 + 1064304 aaGCTGGCTgccaggcatggtggcaggcccctgtagtcccagctacttgggagggtgaggcaggagaaacgcttgaacccgggaggcagaggttgcagtgagccaagatcgtgtcactgcactccagcctgggcgacagagagagactccatctc-----------------------------------taaagaaa------------------------------------------------------gaaaaaaa-----------aaaaTAGCTGGCTGCTCATCACTGAGTTTCTGGTGTGGTGGCCCCA s panTro4.chr19 59829311 223 + 63644993 aaGCTGGCTgccaggcatggtggcaggcccctgtagtcccagctacttggaagggtgaggcaggagaaatgcttgaatccgggaggcggaggttgcagtgagccgagatcgtgtcactgcactccagcctgggcgacagagagagactccatctc-----------------------------------taaaaaaaagaaaa------------------------------------------------gaaaaaaa-----------aaaaTAGCTGGCTGCTCATCACTGAGTTTCTGGTGTGGTGGCCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742634 211 + 60714840 aaGCTGGCTgccagacatggtggcaggcccctgtagtcccagctacttgggagggtgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgtcactgc-------------------agcgagactccatctc-----------------------------------taaaaaaaaacaaagaaaa-----------------------------------------ggaaaaaaaa-----------CAAATAGCTGGCTATTCACCACTGAGTTTCTGGTGTGGTGGCCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279791 227 - 106955855 AAACTGGCTgccagacatggtggtaggcccctgtagtcccagctacttgggaggctgaggcaggagaaacgcttgaacccaggaggcggaggtttcagtgagccgagattgcgtcactgcactccagcctgggcgacagagcgagactccatctc-----------------------------------taaaaaaagaaagaaaag--------------------------------------------aaaaaaag-----------caaaTAGCTGGCTGCCCATCACTGAGTTTCTGGTGTGGTGGTCCCA i nomLeu3.chr10 I 116 C 0 s rheMac3.chr19 60568347 244 + 64156825 aaGCTGGCTgccaggcatggtggcaggccgctgcagtcccagctacttgggaggctgaggcaggagaaacgcttgaacccaggaggcggagactgcagtgagccaagatcgcatcactgcactccagcct-ggcgtcagagcgagactccgtctc-----------------------------aaaaaaaaaaaaaaaaaagaaaagaaaaGAAAGG--------------------------------AGAAAATATA-----------CAAATAGCTGGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694558 244 + 59248254 AAGCTGGCTgccaggcatggtggcaggccgctgcagtcccagctacttgggaggctgaggcaggagaaatgcttgaacccaggaggcggagactgcagtgagccaagatcgcatcactgcactccagcct-ggcgacagagcgagactccgtctc-----------------------------aaaaaaaaaaaaaaaaaagaaaagaaaaGAAAGG--------------------------------AGAAAATATA-----------CAAATAGCTGGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807308 238 + 51301725 aagctggctgccaggcatggtggcaggccgctgcagtcccagctcctcgggaggctgaggcaggagaaacgcgtgaacccaggaggcggagactgcagtgagccaagatcgcgccactgcactccagcct-ggcgacagagcgagattccgtctc-----------------------------------aaaaaaaaacaagaaaagaaaagaaagg--------------------------------agaaaatata-----------caaatagctgGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523612 274 + 50890351 AAGCTGGCTgccaggcatggtggcgggccgctgcagttccagctacttgggaggctgaggcaggagacccgcttgaacccgggaggtggaggttgcagtgagccaagatcgcgtctctgcacttcagcttgggtgacagagcgagactccttctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaagaaaagaaaagaaagg--------------------------------agaaaatata-----------caaaTAGCTGGCTGCCCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871914 279 + 49145316 aatttagtt---aggcgtggtggcaggcacctgtcgtcccagccactcaggaggctgaggcaggagaaacacttgaacccggcaggcggaggttgcactgagctgagatcacgccactgcactccagcctgagcaacagagtgagatgccatctc-----------------------------------TCAAACAGATAAATACATTTAAAAATGGCTTAGATGGTAAATCTTCTAAAATAATTTGACCAAAATAATAATAATTTTTCTAAAACAGCTGGCTGCTCATCACTGAGTTTCTGGTGCGGGGACCCCG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I a score=1356635.000000 s hg38.chr19_GL949748v2_alt 889208 381 + 1064304 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACGTACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACCGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCTTCGCCGC--CA---TGTCCTACCTGGAGCCCTGAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- s panTro4.chr19 59829534 381 + 63644993 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACGTACAGCGCGGATATGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCTTCGCCGC--CA---TGTCCTACCTGGAGCCCTGAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742845 383 + 60714840 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCGCGTACAGCGCAGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAGATGCTCAATTCCCCCCGCCCCCCCCCGCCACA---CATCCTACCTGGAGCCCT-AAGGATCCCCAGAGAGTGATGGGGGAGGGTGTC---------- i ponAbe2.chr19 C 0 I 1366 s nomLeu3.chr10 103280018 381 - 106955855 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGAAAGATCCACCCACGTACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAAGCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCCCCACCGC--CA---TGTCCTACCTGGAGCCCTAAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60568591 381 + 64156825 CCTTCTCTCATAGAAATGTATGACACACCCACGCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCGGAGTTCCCCGTGGGCCCTGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CG---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAC-AGGGAGGGTGTC---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694802 381 + 59248254 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCGGAGTTCCCCATGGGCCCTGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CG---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAC-GGGGAGGGTGTC---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807546 381 + 51301725 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCAGAGTTCCCCATGGGCCCGGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CA---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523886 384 + 50890351 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCCTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTATGGGAAGGTCCAGGCGGAGTTCCCCATGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CGCCATGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872193 377 + 49145316 CCTTCTCTCGTAGGAATGTATGACACGCCCACCCTCTCAGTTCATCCCAGACCGGAAGTGATCTCGGGCGAGAAGGTGACCTTCCATTGCCGTCTGGGGACTGCAACAAGCACCTTCTTTCTGCTCAAGGAGGGAAGATCCAG---CGTACGGCGCGGATACGGGAAGGTCCAGGCCGAATTCCCCTTGGGCTCTGTGACCACATCCCACAGAGGGACATACCGATGTTTTGGCTCCTACAACAACCATGCGTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAGA-GCCCCGGTTCCCACACCTCCCGCTGC--CA---TGTCGTACCTGGAGCCCTAAGGGATCTCCAGATCGTGAT-GGGGAGGGTATC---------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19990709 380 - 122678785 CCTTCTCCCACAGGAATGTATGATACGCCCACTCTCTCCGTTCATCCCGGGAATAAGGTGATTTCGGGAAAGAACGTGACCTTCTCTTGCCGTCTAGACACTGCAACAAACAAGTTCTTTCTGCTCAAGGAGGGACGATCCAGCCACCCACAACACAGATATGGGAACATCCAGGTGGAGTTTCCCATAGGCCCTGTGACCACAGCCCACAGAGGGACGTACAGATGTTTTGGATCTTATAACAACCATGCGTGGTCTTTCCCCAGTAAGCCTGTGAAACTCCTGGTCACAGGTGAGGAAACTCCCAGATTTCCCC-----------T--CA---TGTCCCCTCTGGAACCCCAAGTAAACCCTGACCAGTGAT-GAGGAAGGGACAGGTGGGAAAC i canFam3.chr1 I 1526 C 0 a score=171318.000000 s hg38.chr19_GL949748v2_alt 889589 80 + 1064304 CAAGGG---------------------------ACGTCCACTTCCTGGGTGCCTGGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA s panTro4.chr19 59829915 80 + 63644993 CAAGGG---------------------------TCATCCACTTCCTGGGTGCCTGGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280399 80 - 106955855 CAAGGG---------------------------ACGTCCACTTCCTGGGGATCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGAAGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60568972 80 + 64156825 CAAGGG---------------------------ACGTCCACTTCCTGGGAGCCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695183 80 + 59248254 CAAGGG---------------------------ACGTCCACTTCCTGGGAGCCCAGTTGGTCATG--TGACGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807927 56 + 51301725 CAAGGG---------------------------ACGTCCACTTCCCGGGAGCCCAGT--------------------------aag--caggaaggaggagggagcagaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524270 80 + 50890351 CAAGGG---------------------------ACGTCCACTTCCCGGGAGCCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872570 80 + 49145316 AAAGGG---------------------------ACGTTGGCTTCCTGGGGGCCCAGGTGGTGGTG--TGAGGAAGATCACCAGAAA--CAGGAAGGAAGAAGGTGCAGAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19991089 111 - 122678785 CACGGAGAGCATCTCGCTCCAGCACCCTCATCCACATGCATTTTGTGGAGGCCCATTTGATTGTTCCTGAGGAAGAAGGCCAGAGGGACAAGAAGAGGGAGGGCCCAGAGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56743228 1366 + 60714840 I a score=25571.000000 s hg38.chr19_GL949748v2_alt 889669 10 + 1064304 AAGGAATGGT s panTro4.chr19 59829995 10 + 63644993 AAGGAATGGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280479 10 - 106955855 AAGGAATGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569052 10 + 64156825 AAGGAATGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695263 10 + 59248254 AAGGAATGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807983 10 + 51301725 aaggaatggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524350 10 + 50890351 AAGGAATGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872650 10 + 49145316 AAGAAATGGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991200 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I a score=250356.000000 s hg38.chr19_GL949748v2_alt 889679 132 + 1064304 Aaggcgggtggatcacaaggtcaggagttcgagaccagcctggccaagacggtgaaaccccgtctctactaaaaatacagaaattagccagacgcagtggcggacacctgtagtcccagctactcaggaggc s panTro4.chr19 59830005 132 + 63644993 Aaggcgggtggatcacaaggtcaggagttcgagaccagcctggccaagacggtgaaaccccgtctctactaaaaatacaaaaattagccagacgcagtggcggacacctgtagtcccagctactcaggaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280489 132 - 106955855 Aaggcaggtggatcatgaggtcaggagttcgagaccagcctggccaagacagtgaaaccccatctctactaaaaatacaaaaattagccagacgcagtggtggacacctatagtcccagctactcaggaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569062 132 + 64156825 Aaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaagacagtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695273 132 + 59248254 Aaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807993 132 + 51301725 aaggcgggcggatcacgaggtcaggagttcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524360 132 + 50890351 Aaggcgggcggatcacgaggtcaggaggtcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991200 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=24444.000000 s hg38.chr19_GL949748v2_alt 889811 9 + 1064304 tgaggcagg s panTro4.chr19 59830137 9 + 63644993 tgaggcagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280621 9 - 106955855 tgaggcagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569194 9 + 64156825 tgaggcagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695405 9 + 59248254 tgaggcagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808125 9 + 51301725 tgaggcagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524492 9 + 50890351 tgaggcagg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19991200 9 - 122678785 TGAGGCAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=190776.000000 s hg38.chr19_GL949748v2_alt 889820 121 + 1064304 agaatcgcttgaacccgggaggcgggggttgtagtgaaccgagatcataccaccgcactgcaacctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaa-gaaTGGC s panTro4.chr19 59830146 116 + 63644993 agaatcgcttgaacccgggaggcgggggttgtagtgaaccgagatcataccaccgcactgcaacctgggcgacagagcaagactccatctc-----aaaaaaaaaaaaaaaaaa-gaaTGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280630 120 - 106955855 agaatcgcttgaacctggcaggtggaggttgcagtaagccgagatcgtgccactgcactccagcctgggtgacagagaaagactccatctc-aaaaaaaaaaaaaaaaaaaaaa-gaaTGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569203 121 + 64156825 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcaacacagcaagattccatctc-caaaaaaaagaaaaaaaaaaaaTGAATGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695414 116 + 59248254 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcaacacagcaagattccatctc-aaaaaaaaaaaaaaaaaa-----gaaTGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808134 120 + 51301725 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcgacacagcaagattccatctc-aaaaaaaaaaaaaaaaaaaaaa-gaatggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524501 112 + 50890351 agaatcgcttgaacccaggaggtagaggttgcagtgagccgagatcataccactgcactacaacctgggcaacacagcaagattccatcta-caaaaaaaaaaaaa---------gaaTGGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991209 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=504229.000000 s hg38.chr19_GL949748v2_alt 889941 186 + 1064304 AAGACCGGAGGAAACCAAAAACCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGACGAGCAATCAGAGCCTCCCAGTGACACTAAAAACGTGGCATTCATTCAAAATATTC s panTro4.chr19 59830262 186 + 63644993 AAGACCGGAGGAAACCCAAAACCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGACGAGCGATCAGAGCCTCCCAGTGACACTAAAAACGTGGCATTCATTCAAAATATTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280750 185 - 106955855 AAGACTAGAGGAAACCCAAAACCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGGTGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGCTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAATGATACTAAAAACGTGGCATTCATTCAAAATATTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569324 185 + 64156825 AAGACTGGAGGAAACCCAAAATCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGGCGACACTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCAGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695530 186 + 59248254 AAGACTGGAGGAAACCCAAAATCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808254 185 + 51301725 aagaCTGGAGGAAACCCAAAatccttac-tttttttctttatctccttttcCAGGCGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCGCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524613 185 + 50890351 AAGACTGGAGGAAACCCAAAATCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGACGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872660 185 + 49145316 CAGACCAGGGGAAACTCAAAAGCCTTCC-TTACGTTCTTCATCTCCTTTTCCAGGTGACACAGAGAATACCAGCCTGGCACCTACAGACCCCA---CCTCTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGAGGAGGAATCAGAGGCTCCCAATGACACTAAAAACGGGGCATTCATTCAAAATATTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19991209 186 - 122678785 AAGACCGGAGGAAACCCAAAACCCTCA--TGGTTTTCTTTGTTTCCACTGCCAGAAGGTGTTGGGGACACCAGCCTTGTACCCACAGAACATACATCTTTTTCTGGTGAGTAACAGGTATTTCTAAGCCTGGGGAAGGGAGCAAAGCCTCCCAGTG-CATTAAAAACATGGCATTTGTTCAAAATATCC i canFam3.chr1 C 0 I 703 e ponAbe2.chr19 56743228 1366 + 60714840 I a score=79478.000000 s hg38.chr19_GL949748v2_alt 890127 37 + 1064304 ATCGAggccaggcgtggtggctcacgcctgtaatccc s panTro4.chr19 59830448 37 + 63644993 ATCGAggccaggcgtggtggctcacgcctgtaatccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280935 36 - 106955855 GTCGAGGCTGGGCGCGGTGGCTCA-GCTTGTAATCCC i nomLeu3.chr10 C 0 I 807 s rheMac3.chr19 60569509 37 + 64156825 ATCGAggccaggagcagtggctcacgcctgtaatccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695716 37 + 59248254 ATCGAggccaggagcagtggctcacgcctgtaatccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808439 37 + 51301725 attgaggccgggcgcggtggctcacgcctgtaatccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524798 37 + 50890351 ATCGAggccaggcgcggtggctcacgcctgtaatccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872845 37 + 49145316 ATCAAggctgagcatggtggctcactcctataatccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I a score=29718.000000 s hg38.chr19_GL949748v2_alt 890164 16 + 1064304 agcactttgggaggcc s panTro4.chr19 59830485 16 + 63644993 agcactttgggaggcc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60569546 16 + 64156825 agcactttgggaggcc i rheMac3.chr19 C 0 I 1121 s macFas5.chr19 55695753 16 + 59248254 agcactttgggaggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808476 16 + 51301725 agcactttgggaggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524835 16 + 50890351 aacactttgggaggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872882 16 + 49145316 agcacgctgggaggcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e nomLeu3.chr10 103280971 807 - 106955855 I a score=165696.000000 s hg38.chr19_GL949748v2_alt 890180 151 + 1064304 gagat-ggtgcatcatttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaacttag---gctgggcatcatggctcacacctgtaatcccaacacttcgggaggccaaggtggttggatcac s panTro4.chr19 59830501 151 + 63644993 gagat-ggtgcatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaacttag---gctgggcatcatgactcacacctgtaatcccaacacttcgggaggccaaggtggttggatcac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55695769 151 + 59248254 aggat-ggtgcatcacttgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattag---gctgagcactatggctcactcctgtaatcccagcactttgggaggctgaggcaggcagatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808492 151 + 51301725 aggat-ggtgcatcacttgaggtcaggagttcaagaccagcccggccaacatggcgaaaccccatctctactaaaaatacaaaaattag---gctgagcaccatggctcagtcctgtaatcccagcactttgggaggctgaggcaggcagatcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524851 151 + 50890351 gggat-ggtgcatcacttgaggtcaggagttcaagaccagcctggccagcatggcaaaaacccatctctactaaaaatacaaaaattag---gctgggcaccatggctcactcctgtaatcccagcactttgggaggctgaggcaggcagatcac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872898 151 + 49145316 gagatgggtgcatcacttgaggtcaggagttcgagaccagcctggccaacatagtgaaaacctgtctctactaaaaatacaaaaattagtcagctgtg-gtaatgg---acacctgtaatccgagctactctggaggctgaggcaggagaatcgc i calJac3.chr22 C 0 I 598 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e nomLeu3.chr10 103280971 807 - 106955855 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=159239.000000 s hg38.chr19_GL949748v2_alt 890331 186 + 1064304 aaggtcaggaattcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcctggtggtgctcgcctgtaatcccagctactcaggaggctgaggcaggagaattg-ttgaacctgggatgcagaggttgcagtgagctgagatcgcgccactgcattcca s panTro4.chr19 59830652 186 + 63644993 aaggtcaggaattcaagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcctggtggtgctcgcctgtaatcccagctactcaggaggctgaggcaggagaattg-ttgaacctgggatgcggaggttgcagtgagctgagatcgcgccactgcattcca i panTro4.chr19 C 0 C 0 s macFas5.chr19 55695920 187 + 59248254 aaggtcaggaattcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggtactcacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggaggcggaggttgcagtgagctgagattgcaccattgcactcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808643 187 + 51301725 aaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggtactcacctgtaatcccagctacttgggaggctgaggcaggagaatggcttgaaccagggaggcagaggttgcagtgagctgagatcacgccactgcactcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47525002 187 + 50890351 aaggtcaggaattcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtactcacctgtaatcccagctacttaggaggctgaggcagaagaatcgtttgaaccagggaggcagaggttgcagtgagctgagattgcgccattgcactcca i chlSab2.chr6 C 0 I 817 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=15465.000000 s hg38.chr19_GL949748v2_alt 890517 51 + 1064304 ctccactgcacgacacagcgagactccatctcacagaaaaacaaaaacaaa s panTro4.chr19 59830838 51 + 63644993 ctccactgcacgacacagcgagactccatctcacagaaaaacaaaaacaaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696107 48 + 59248254 ---gcctgggcaatagagacagattctgtctcaaaaaaaaaaaaaaagaaa i macFas5.chr19 C 0 I 280 s papAnu2.chr19 47808830 48 + 51301725 ---gcctgggtgacagagcgagactccatctcacaaaaaaaacaaaagcaa i papAnu2.chr19 C 0 I 1 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=573.000000 s hg38.chr19_GL949748v2_alt 890568 2 + 1064304 aC s panTro4.chr19 59830889 2 + 63644993 aC i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47808879 2 + 51301725 ac i papAnu2.chr19 I 1 I 162 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e macFas5.chr19 55696155 280 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=72299.000000 s hg38.chr19_GL949748v2_alt 890570 305 + 1064304 TAT--TATATata----tatattcatcaagtgcatagtatacacagtgaactacactgtaacagtcagccaggcagatatcttgactctgcagcacttagattctagcaggaggagacacaccatcggtcaacgtcaggatagcacacaggagggaatgatgctatggaaggaaaagacaaagtagaacagacttacagtgattgaaatggcagctagcaatattaaataggtttgtccagatggacctcacagagaaagaaggcatctgagcaaatgcgttcagacttgagttaatcatgtggctgtcag s panTro4.chr19 59830891 306 + 63644993 TATTATATATata----tatattcatcaagtgcatagtatacacagtgaactacactgtaacagtcagccaggcaaatatcttgacggtgcagcacttagattctagcaggaggagacacaccatcggtcaacgtcaggatagcacataggagggaatgatgctatggaaggaaaagacaaagtagaacagacttacagtgattgaaatggcagctagcaatattaaataggtttgtccagatggacctcacagag-aagaaggcatctgagcaaatgcgttcagactggagttaatcatgtggctgtcag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47809043 307 + 51301725 tattatatatataattttatatatatatagtgcatagtatataCGGTGAACTACACTGTAACAGTCAGCCAGGCAACTATCTTGACTCTGTGGCACTTAGATTCTAGCAGAAGGAGACAGACCATGGATCAATGTCAGGATAGCACATAGGAGGAAATGATGCTATGGAAGGAAAAGACGAAGTAGAACAGACTTACAGGGACTGAAATGGCAGGTAGCAGTATTAAATAGGGTTGTCCAGATGGACCTCACAGAG----AAGGCATCTGAACAAATGCGTTCAGACTTGAGTTAGTCACGTGGCTCGCAG i papAnu2.chr19 I 162 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e macFas5.chr19 55696155 280 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=74852.000000 s hg38.chr19_GL949748v2_alt 890875 155 + 1064304 gagaaaggaggctctggagagaatgaaatggcatctgcctgtgccctggggcaggaagataactggggtaatacaataataactatgaggccaggagggttgaaAATGATGTTTGGAAGATGAC------GGTGGGATGGGCCTGGGGC-GCACGGCTAGGA s panTro4.chr19 59831197 155 + 63644993 gagaaaggaggctctggacagaatgaaatggcatctgcctgtgccctggggcaggaagataactggggtaatacaataataactatgaggccaggagggttgaaAATTATGTTTGGAAGATGAC------GGTGGGATGGGGCTGGGGC-GCACGGTTAGGA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696435 161 + 59248254 gagaaaggaggctccagagagag-gaaatggcctctgcctgtgccctggggcaggacgatgactggggtaataaaataataactatgaggccaggagggttgaaAATGATGTTTGGAAAATGACAGTGGGGATGGGATGGGGCTGGGGCTGCACGGTTAGGA i macFas5.chr19 I 280 I 6 s papAnu2.chr19 47809350 161 + 51301725 GAGAAAGGAGGCTCCAGAGAGAG-GAAATGGCCTCTGCCTGTGCCCTGGGGCAGGACGATGACTggggtaataaaataataactatgaGGCCAGGAGGGTTGAAAATGATGTTTGGAAAATGACAGTGGGGAtgggatggggctggggctgcACCGTTAGGA i papAnu2.chr19 C 0 I 5 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=25983.000000 s hg38.chr19_GL949748v2_alt 891030 322 + 1064304 TT-------ACAGGAGTGAggcccggcgcggtggctcacgcctgtaatcccagcactttgggaaaccgaggcaggtgggtcatgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctact-aaaaaaaaatacaaaaattatccgggcgtggtggcgggcgcctgtagtcccagctacacaagaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagctgagatcgcgccactgcactccagcctgagcgacagagtgagactccgtctcaaaaaaaaaaaaaaagaaaaagaaaa s panTro4.chr19 59831352 323 + 63644993 TGCTGAAAAAAAACAGTGAggcagggcatggtggctcacgcctgtaatcccagcactttgggaagccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacacagtgaaaccctgtctctactaaaaaaaaaatacaaaaattatccgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagtgagactccgtctcaaaaaaaaa-------aaaaagaaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e macFas5.chr19 55696596 6 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=311.000000 s hg38.chr19_GL949748v2_alt 891352 2 + 1064304 ag s panTro4.chr19 59831675 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281778 2 - 106955855 AA i nomLeu3.chr10 I 807 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e macFas5.chr19 55696596 6 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 891354 1 + 1064304 a s panTro4.chr19 59831677 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281780 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696602 1 + 59248254 A i macFas5.chr19 I 6 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=910.000000 s hg38.chr19_GL949748v2_alt 891355 1 + 1064304 a s panTro4.chr19 59831678 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281781 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696603 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809516 1 + 51301725 a i papAnu2.chr19 I 5 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=31170.000000 s hg38.chr19_GL949748v2_alt 891356 36 + 1064304 AAAAAAATAGTGAGACTTTGAATTTCACTATGTGTG s panTro4.chr19 59831679 28 + 63644993 aaaaaaaTAGTGAGACTTTGGATTTCAC-------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281782 36 - 106955855 AAAAAAATAGTGAGACTTTGAATTTGACTATGTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696604 28 + 59248254 AAAAAAATAGTGAGACTTTGAATTTGAC-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809517 28 + 51301725 aaaaaaatagtgagaCTTTGAATTTGAC-------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45873647 28 + 49145316 AGAAAAACAGTGAGACTTTGAATTTGAC-------- i calJac3.chr22 I 598 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=3128.000000 s hg38.chr19_GL949748v2_alt 891392 3 + 1064304 TAT s panTro4.chr19 59831707 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744594 3 + 60714840 TAT i ponAbe2.chr19 I 1366 C 0 s macFas5.chr19 55696632 3 + 59248254 TAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809545 3 + 51301725 TAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45873675 3 + 49145316 TAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e nomLeu3.chr10 103281818 0 - 106955855 C e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=145450.000000 s hg38.chr19_GL949748v2_alt 891395 78 + 1064304 GTGTGAGGAGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTAAATAGAAG---ACGggctgggccgggtggctc s panTro4.chr19 59831710 78 + 63644993 GTGTGAGGAGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTAAATAGAAG---ACCggctgggccgggtggctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744597 81 + 60714840 GTGTGAGGAGAAAGAGGTAATGATGACTTAACGAGGAAAATGAGGCTTAAATAGAAGGACAGGggctgggctgggtggctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281818 73 - 106955855 -----AGGAGAAGGACCTAATGATGACTGAATGAGGAAAATGAGGCTTAAATAGAAG---ACGggctgggccgggtggctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696635 80 + 59248254 CTGTGAGGGGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTACACAGAAG-ACAGGggctgggccgtgtggttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809548 80 + 51301725 ATGTGAGGGGAAAGAGGTAATGATGActtaatgaggaaaatgaggcttacACAGAAG-ACAGGGGCTGGGCCGTGTGATTc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526006 77 + 50890351 GTGTGAGGGGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTACACAGAAG-ACAGGGGCTG---CGTgtggttc i chlSab2.chr6 I 817 C 0 s calJac3.chr22 45873678 76 + 49145316 GTGTGAGGAGA--GGAGTGATGCT--CTTAATGAGGAAAATGAGGCTTAGGTAGAAG-ACCTGggctgggcgtggtggctc i calJac3.chr22 C 0 I 3 e canFam3.chr1 19991395 703 - 122678785 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=107764.000000 s hg38.chr19_GL949748v2_alt 891473 62 + 1064304 ccgcatgtaatcccagcactttggaaggcaggggcggctggatcacttgaggtcaggagttc s panTro4.chr19 59831788 62 + 63644993 ccgcatgtaatcccagcactttggaaggcaggggcggctggatcacttgaggtcaggagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744678 62 + 60714840 gcgcatgcgatctcagcactttggaaggcagaggcaggtggatcacttgaggtcaggagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281891 62 - 106955855 ccgcatgtaatcccagcacttcggaaggcaggggcaggtggatcacttgagatcaggagttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696715 62 + 59248254 ccgcgtgtaatcccagcactttggaaggcagaggtgggtggatcacttgagatcaggagatc i macFas5.chr19 C 0 I 312 s papAnu2.chr19 47809628 62 + 51301725 ccgcgtgtaatcccagcactttggaaggcagaggcgggcggatcacttgaggtcaggagatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526083 62 + 50890351 ccgcgtgtaatcccagcacttaggaaggcagaggcgggtggatcacttgaggtcaggagatc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e calJac3.chr22 45873754 3 + 49145316 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=406279.000000 s hg38.chr19_GL949748v2_alt 891535 181 + 1064304 aagaccagcctggccaacacagtgaaaccccatctctactaaaaatacaaacatgagttgggtgtggtggcgcacgccagtaattacagctactcggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgtactccagcctCAGAGg s panTro4.chr19 59831850 181 + 63644993 aagaccagcctggccaacacagtgaaaccccatctctactaaaaatacaaacattagttgggtgtggtggcgcatgccagtaattacagctactgggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgtactccagcctcggAGg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744740 181 + 60714840 gagaccagcctggccaacacagtgaaaccctgtctctactaaaaatacaaacattagctgggcgtggtggtgcacgcctgtaattacaggtactcggggctgaagcaagaggattgcttgaacttgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctcggAGg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281953 181 - 106955855 gagaccagcctggccaacacagtgaaaccccgtctctactaaaaatacaaacattagctgggcgtggtggcgcacgcccataattacagctactcggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgcactccaacctcggAGg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60570683 179 + 64156825 Aagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtaggcatggtggcacatgct-gtaattacagctactcggggctgaggcaagaggatcgctt-aattcgggaggctgaggttgcagtgagctgagatcgcaccactgcgctccagcctggAAGg i rheMac3.chr19 I 1121 C 0 s macFas5.chr19 55697089 179 + 59248254 aagaccagcctggccaacgtggtgaaaccccatctctactaaacatacaaacattaggtaggcatggtggcacatgct-gtaattacagctactcggggctgaggcaagaggatcgctt-aattcgggaggctgaggttgcagtgagctgagatcgcaccactgcgctccagcctggAAGg i macFas5.chr19 I 312 C 0 s papAnu2.chr19 47809690 179 + 51301725 gagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtgggcgtggtggcacacgct-gtaattacagctacccagggctgaggcaagaggatcgctt-aactcgggaggctaaggttgcagtgagctgagatcgcaccactgcgctccagcctggaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526145 180 + 50890351 gagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtgggcgtggtggcacacgct-gtaattacagctactcggggctgaggcaagaggatcgcttaaactcggcaggctgaggttgcagcaagctgagatcgcaccactgcgctccggcctggAAGg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e calJac3.chr22 45873754 3 + 49145316 I a score=451536.000000 s hg38.chr19_GL949748v2_alt 891716 198 + 1064304 cctgtcatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgaggttgggagttcaagaccagcctggccaacatggc-aaaacccc-gtttctactaaaaatatgaaaaaaattacctgggtat-gtggtgtgtgcctgtagtcccagctactccagaggctgGAAC-----------------------------------------------------------------------------ACAGT-GAGACTCTATCTC-----AAAAAAAAA-----------AA s panTro4.chr19 59832031 203 + 63644993 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgaggttgggagttcaagaccagcctggccaacatggc-aaaacccc-gtttctactaaaaatatgaaaaaaattacctgggtat-gtggtgtgtgcctgtagtcccagctactccagaggctgGAAC-----------------------------------------------------------------------------ACAGT-GAGACTCTATCTC-----AAAAAAAAAA------AAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744921 264 + 60714840 cctgtaatcccagacctttgggagaccaaagccagcaggtcaTACCACTGCACTCCAGCCTCGGAGgcctgtaatcccagacctttgggaagccgaagccagcaggtcatctgaggtcgggagttcgagaccagcctggccaacatgcc-aaaacccc---ctctactaaaaatatgaaaaaaattagctgggtgt-gtggtgtgtgcctgtagtcccagctactccagagtctgGAAC-----------------------------------------------------------------------------AAAGCAAAGACTCTAGCTC-----AAAAAAAAC-----------AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282134 209 - 106955855 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcgggcaggtcatctgaggtcaagagttcaagatcagcttggccaacatggc-aaaacccc-gtctctattaaaaatatgaaaaaaattacctgggtgt-gtggtgtgtgcatgtagtcccaggtactccggtggctgaaac-----------------------------------------------------------------------------aCAGC-GAGACTCTATCTC-----AAAAAAAAACTCGTCTCAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60570862 206 + 64156825 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccaaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggcaaaaacgcc-atctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctgGAAA-----------------------------------------------------------------------------AGAGC-GAGACTCTATCTC-----AAAAAAAAAAACAAACAAACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697268 207 + 59248254 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccaaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggcaaaaacgcc-atctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctggaac-----------------------------------------------------------------------------agAGC-GAGACTCTATCTC----aaaaaaaaaaaacaaacaaacaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809869 210 + 51301725 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtCATCtcagattgggagttcgagaccagcctggc-----tggc-aaaacgcc-gtctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctggaac-----------------------------------------------------------------------------agagc-cagactctatctcaaaaaaaaaaaaaaaacaaacaaacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526325 205 + 50890351 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggc-aaaacgcc-gtctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctattcgggaggctggaac-----------------------------------------------------------------------------agAGC-GAGACTCTATCTC-----AAAAAAAAAACCAAACAAACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45873757 282 + 49145316 cctgtaatccccgcgcttcggaag-------------------------------------------------------------------gtagaggcgggcacatcacttgaggtcgggagtttgagaccagcctggccaacacagg-gaaacccctgtctctactaaaaatac---aaaaattagctgggcatggtggtgcatgcctgtaattacagctactc--ggggctgaagcaggagaatcacttgaactcgggaggcagagattacagtgagctgagattgtgccattgcacaccagcctgggcgacaagagt-gaaactgtgtctc-----aaaaaaaaaaaagaa-aaagaa i calJac3.chr22 I 3 C 0 e canFam3.chr1 19991395 703 - 122678785 I a score=1042435.000000 s hg38.chr19_GL949748v2_alt 891914 326 + 1064304 AAATAGAAGACATGACTGGTGCAAAGACACATGCTCACAAGTGCTAGAATGGAATTCCTCGTCAGGTTCGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCCGCAGGGTGAGGTGGGACCTTGTAAAGCTGCAGAACGTCATGGGGTAGACCCAAGGGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATCATCAGCAGACACTTGGGGCACCTACCTTTTAACCACAGAGACGGGACTCCAGAAAGGTAAGTAGACAGCTGGG-GCCATAGGCTCTGAAGGAA s panTro4.chr19 59832234 326 + 63644993 AAATAGAAGACATGACTGGTGCAAAGACACATGCTCACGAGTGCTAGACTGGAATTCCTCGCCAGCTTTGTCCATCTGTGGACCCTTCCACTTTACCCGCTGGATGAAGCTCCTGGGACCTGCAGGGTGGGGTGGGACCTTGCAAAGCTGCAGAACGTCATGGGGTAGACCCAAGGGAAGGAG-TGCTGGGGCGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCCTTGGGACACCTACCTTTTAACCACAGAGATGGGACTCCAGAAAGGTAAGTAGACAGCTGGG-GCCATAGGCTCTGAAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745185 326 + 60714840 AAATAGAAGACATAACTGGTGCAAAGACACATGCTCATGAGTGCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGGTGGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTAGACCCAAGAGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCGTTGGGATACCTACCTTTTAACCACAGAGACGGGACTCCAGAAAGGTAAGTAGACAGCTAGG-GCCATAGGCTCTGAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282343 326 - 106955855 AAATAGAAGACATGACTGGTGCAAAGACACAAGCTCATGAGTGCTAGACTGGAATTCATCTTCAGCTTTGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGATGGGGTGGGACCTTGCAAAGCTGCAGAATGTCATGGGGTAGACCCAAGAGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCGTCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCCCTGGGACACCTACCTTGTAACCACAGAGACGGGACTCCAGGAAGGTAAGTAGACAGCTGAG-ACCGTAGGCCCTGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571068 326 + 64156825 AAATAGAAGACATGATTGGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCCGGTGTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACTTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGCGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGACGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCAGAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697475 326 + 59248254 aaaTAGAAGACATGATTGGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCCGGTGTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACTTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGCGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGATGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCAGAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810079 326 + 51301725 aaatagaagacaTGATTTGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCTGCTTTACCTGCTGGATGAAGCTCCCGGGACCTGCAGGGTAGAGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGACGTCAacatcattctctttt-------cttcacttccCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAGCCACAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526530 326 + 50890351 AAATAGAAGACATGATTGGTGCAAAGATACATGCTTATGAGTTCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTGGATCCAAGGGAAGGAG-CATGGGGGCAGAAGACGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCACAGAGACGGGACTCCAGAAAAGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874039 316 + 49145316 aTGTAGAAGACGTGACCGTTGCAAAGACACACACTCATGAGTGCTAGAGTGGACTCCCTCCTCAGGCTTGTCCATCTGCGGACCCTTCCACTGTACCTGCTGGATGAAGCT-CTGGGACCTGCAGGGC-GGGTGGGACCT--------TGCAGAAGGTCATTGGGTATACCCAAGGGAAGGAG-CGCTGGGGTGGAGGAGGCCAACACCATCCCCTTTT-------CTTTACTTCCCTTATTGTTGGCAGACTCTGGGGACACCTACCTTTTATCCACAGAGACGGGGCTCCAGAAAGGTAAGTGGACACCTGGG-GCCGAGGGCTGTAAAGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992098 319 - 122678785 AGATGGAAGACACATCTGGCATGAGGCC---------------CTGGAGCTGAATTCCCCCTTGGGTTTGCCTGCCCTTTGGCTCCTGCTCTCTACCTGCCAGACGAAGCCACTAGGACCTGGAGGTGGGGTGGGGACCTGGAAAAGCTGCAGAAGGTCATGGGGTCCATCCAAGGGGAGGAGAGGCTCCCTCAGCAGAGACCAACACCATCTCTTTTTCTCCCTACTTCACTTCCC-TATCATCCGCAGAACCTTGGGACACCTACTTGTTAGCCACAGAAGCAGAATTCCAGCAAGGTAAGCAAGCAATGGAGTGCTGCACACTGTGAAGGAA i canFam3.chr1 I 703 I 37 a score=531260.000000 s hg38.chr19_GL949748v2_alt 892240 188 + 1064304 GGGGCTGGGCATAGAGTA--GACCTAGGAAGGGAATCTAAAT---GGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtagctcacacctgtaatctcagccctttgggaggccgaggcgggcagatcatctgaggtcgggagttcaagaccagtctggccaacatggcgaaatcccatctctactaaaaatac s panTro4.chr19 59832560 188 + 63644993 GGGGCTGGGCATAGAGTA--GACCTAGGAAGGAAATCTAAAT---GGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtagctcacacctgtaatctcagccctttgggaggccaaggcgggcagatcatctgaggtcgggagttcgagaccagtctggccaacatggcgaaatcccatctctactaaaaatac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745511 196 + 60714840 GGAGCTGGGTATAGAGTA--GACCTAGGAAGGAGATCGGGATGGAGGGAACAAGAGGGTGTCCTTGGCCAggccaggcacagtggctcacacctataatctcagccctttgggaggccgaggcgggcagatcatctgaggtcgggagttcgagaccggtctgaccaacatggcgaaaccccatctctactaaaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282669 191 - 106955855 GGAGCTGGGCATAGAGTA--GACCTAGGAAGGAGATTGAGATGGAGGGAACAAGAGGGTGTCCTT-----ggccaggcacagtggctcacacctgtaatctcagccctccaggaggccgaggcgggcagatcatctgaggtcgggagttcgagaccggcctggccaacatggcgaaaccccatctctactaaaaatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571394 193 + 64156825 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtggctcacgcctgtaatcccagccctttgggaggccgaggcgggcagatcatctgaggtcaggagttcgagactggtctggccgatatggcgaaaccccatctctactaaaaatag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697801 193 + 59248254 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtggctcacgcctgtaatcccagccctttgggaggccgaggcgggcagatcatctgaggtcaggagttcgagactggtctggccgatatggcgaaaccccatctctactaaaaatag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810405 192 + 51301725 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGA-GGCgtcctt-----ggccaggcgcagtggcttacgcctgtcatcccagccctttgggaggccgaggcaggtagatcatctgaggtcaggagtttgagactggtctGGCcgatatggcgaaaccccatctctactaaaaatag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526856 193 + 50890351 GGAGCTGGGCATAGAGTAATGACCTGGGAAAGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggtgcagtggctcacgcttgtaatcccagccctttgggaggccaaggcgggcagattatctgaggtcaggagttcgagactggtctggccaatatggcgaaaccccatctctactaaaaatag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874355 193 + 49145316 GGAGCTGGGTGGAGAGTCCCGAGCAGGGAAGGAGATGGGGATCAGTGAAACAGGAGGGTGTCCTT-----ggccaggtgcggtagcccacgcctgtaatcccagcacactgggaggccaaggcaggcggatcatctgaggtcaggagtttgagaccagcctggccaatgtggggaaaccccatctctagcaaaaatac i calJac3.chr22 C 0 I 299 e canFam3.chr1 19992417 37 - 122678785 I a score=418864.000000 s hg38.chr19_GL949748v2_alt 892428 195 + 1064304 aaaaaaattagccaggcgtggtggcgtgtgcctgtagtcccagctacttgggaggctgagacaggagaatagcttgaacccaggaagtggaggttgcagtgagccg-agatcgtgccattgcactccagcctgggcgacaagactgaggctctgtct-caaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59832748 174 + 63644993 aaaaaaattagccaggcatggtggcgtgtgcctgtagtcccagctacttgggaggctgagacaggagaatagcctgaacccaggaagtggaggttgcagtgagccg-agatcgtaccattgcactccagcctgggcgacaagactgaggctctggct-c---------------------aaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745707 183 + 60714840 aaaaaaattagccaggcgtggtggcgtgtgcctgtagtcccagctactcgggaggctgaggcaggagaatagcttgaacccaggaagtggaggtggcagtgagccg-agattatgccattgcactccagcctgggggacaagactgaggctctgttt-c------------aaaaaaaaaaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282860 164 - 106955855 aaaaaaattagccgggcatggtggcgtgtgcctgt-----------------atgctgaggcaggagaatagcttgaaccca-gaagcggaggttgcagtgagccg-agattgtgccattgcactccagcctgggagacaagactgaggctctgtct-c-------------aaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571587 173 + 64156825 ggaaaaattatccgggcatggtggtgcgtgtctgtagtcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatagtgccactgtactccagcctgggcaacaagactgaggctccgtgtac-----------------------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697994 171 + 59248254 gaaaaaattatccgggcatggtggtgcgtgtctgtagtcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatcgtgccactgtactccagcctgggcaacaagactgaggctccgtgtac-------------------------aaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810597 171 + 51301725 aaaaaaattatccgggcatggtggtgcgtgcctgtagtcccagctacttgggtggttgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatcgcgccactgtactccagcctgggcaacaagactgaggctctgtgtac-------------------------aaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527049 170 + 50890351 aaaaaaattatccgggcatggtggtgcatgcctgtagtcccagctacttgggtggctgaggcaggagaatcacttgaacccgggaagtggaggttgcagtgagccg-agatcgtgccactgtactccagcctgggcaacaagactgaggctctgtgtac--------------------------gaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874847 154 + 49145316 acaaaaattagccaggtgtggtggcgctcacctgaagtcccagctactcgggaggctgagacgagag-------------------gtggaggttgcagggagctgaagatcgcactgttgtactccagcctgggcaacaagatcaaggctctgtct-c-----------------------aaaaaagaataaaaC i calJac3.chr22 I 299 C 0 e canFam3.chr1 19992417 37 - 122678785 I a score=777057.000000 s hg38.chr19_GL949748v2_alt 892623 212 + 1064304 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCTACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG s panTro4.chr19 59832922 212 + 63644993 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCTACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745890 212 + 60714840 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCCACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTATGGTTCCTGGTTGAAGACTGGTTCAGCAGGAGGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i ponAbe2.chr19 C 0 M 1634 s nomLeu3.chr10 103283024 212 - 106955855 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCCACAGACCATGCCCTCTGGGATCACACTGCCCAGAATTTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCGGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571760 212 + 64156825 aGAGGGTGTCCTTACATCCCTGTCAGCAATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGG---ACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTAGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698165 215 + 59248254 aGAGGGTGTCCTTACATCCCTGTCAGCAATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTAGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810768 215 + 51301725 agagggtgtcCTTACATCCCTGTCAGCGATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACCTGGGAAGGCAGGAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527219 215 + 50890351 aGAGCGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875001 212 + 49145316 AGAGGGTGTCCTTGGGTCCCTGTCAGCAATCACCCTGTTCTC---CTGCCCACAGAGCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGGTGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTGGTGTGGCTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACCAGAGGGCGAGCCAGCAGAACTTCCACTGGGCAATGCAGGAGAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992454 212 - 122678785 AGGTGGTGCCTGGCTATTCCTGTCAGTAATCAGTCTGTTCTT---CTCACCCCAGCCCCTGCCTTCTGGGATCACACTGCCCATAATATCCTTCAGATTGGTCTGGCTTTCCTGGTCCTGATGGCCCTCATGTGCCTCCTGGTTGATTACTGGCTTTGCAGGAAGAGGATACAAGAGCAAGCCAACAGGGCTTCACCTCAGGAATGCAGGAGAAG i canFam3.chr1 I 37 C 0 a score=255064.000000 s hg38.chr19_GL949748v2_alt 892835 111 + 1064304 GCTG----AACACACAGACTCTTTGAA-GAATGACCATGAGACACAGTGGCCATGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCGGCGTGAGCTCTGTGTTGGACCCACGGAG s panTro4.chr19 59833134 111 + 63644993 GCTG----AACACAAAGACTCTTTGAA-GAATGACCGTGAGACACAGTGGCCGTGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCCGCGTGAGCTCTGTGTTGGACCCACGGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283236 109 - 106955855 GCCA----AATACAAAGACTC--TGAA-GAATGACCATGAGACACAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGCGGCGTGAGCGCTGTGTTGGACCCATGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571972 113 + 64156825 GTTGAACAAACACAAAGACTC--TGAA-GAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTCGGTGGCGTGAGCTCTGTGTCAGACCCACGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698380 113 + 59248254 GTTGAACAAACACAAAGACTC--TGAA-GAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTCGGTGGCGTGAGCTCTGTGTCAGACCCACGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810983 115 + 51301725 GTTGAACAAACACAAAGACTCTTTGAA-AAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGTGGCGTGAGCTCTGTGTCAGACCCGTGgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527434 111 + 50890351 GTTG----AACACAAAGACTCTTTGAA-GAATGACCACGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGTGGCATGAGCTCTGTGTCAGACCCACGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875213 95 + 49145316 CTTG----AACACAAAGACTCTCTGAA-GAACGCCCGAGAGATGCGGCAGCCGTGGGTGGAACTGAAAGCCGGTGTTGAGC----------------CTGTGTTGAACCCACAGAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992666 112 - 122678785 GTTCAG--AACACAGAGAACCCCTGGACAAATGACCAAGAGATGTGCTGGCCACAGTTAGAGCTGAACACTGGCATTGACCTTGGGCTGTGTGAG--CTGTGTTGCACCCATGGAG i canFam3.chr1 C 0 I 4 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=1158352.000000 s hg38.chr19_GL949748v2_alt 892946 530 + 1064304 GAGGGAGTCACTGCAGGGA-------AAGAGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttc----------tttt----tttttttttttgagacagagtttt-ctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctagctctccatccctcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-cccagctaa--ttttgtatttttagtggagacggggtttctccctgtt-----ggctggtctcgaactcctgacctcaagtgat-ctccccgccttggcctcccaaagggctgggattacaggcataagccgctgcgcccagccACTGAATTTCTTCTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAACTATTTTTGTACCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATCTCTCCTTCTTTAACAGGATGGCCATG s panTro4.chr19 59833245 527 + 63644993 GAGGGAGTCACTGCAGGGA-------ACGAGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttc-------------t----tttttttttttgagacagagtttt-ctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctacctctccatccctcgggttcaagtgattctcctgcctcagcctcctgagtagctggaattacaggcatgcgccaccac-cccagctaa--ttttgtatttttagtggagacggggtttctccctgct-----ggctggtctcgaactcctgacctcaagtgat-ctccccgccttggcctcccaaagggctgggattacaggcataagccgctgcgcccagccACTGAATTTCTTCTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAACTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATCTCTCCTTCTTTAACAGGAGGGCCATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283345 540 - 106955855 GAGGGAGTCACTGCAGGGA-------ACAAGGGACACTGGCATGCCATTTGTCAGAGCTTCCCAGACAATGCAGAGGGTGGGAGAACTACATGCTAAAtttcttgttt-ttttttt----tttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctacctctccatccctggggttcaagcgattctcctgactcagccccccgagtagctgggataacaggcatgcgccaccac-ctcggctaa--ttttgtatttttagcagagacggggtttctccctgtt-----ggctgttctcgaactcctgacctcaagtgat-ctccccgcctcggcctcccaaagggctgggattacaggcatgagctgccacgtgcagccACTGAATTTCTTCTGTAGACACATCCTACAGTCTCTTCTAGGCTCTAACTATTTTTGTGCCACTTACGGCAAACCATACTTTTAAGCACTCTGTTCTTTTCTGAAAAGCTCTCTCCTTCTTTAACAGGATGGCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572085 554 + 64156825 GAGGGAGTCACTGCAGGGAACAGGGGACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGCTAAGtttctttctggttttttt----tttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcgtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggctggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccacgcccagccGCTGAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTACTTTTGTGCCACTTACTGCAAACCATACTTTTAAGCACTCTGGTCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGGCCATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698493 554 + 59248254 GAGGGAGTCACTGCAGGGAACAGGGGACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGCTAAGtttctttctggttttttt----gttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggctggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgcccagccGCTGAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTACTTTTGTGCCACTTACTGCAAACCATACTTTTAAGCACTCTGGTCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGGCCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811098 551 + 51301725 gaggaagtcactgcagggA-------ACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGctaaatttctttctggttttttttttctttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcatgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggttggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgccCGGCCGCTGAATTTCTTTTGTGGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGGCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGgccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527545 532 + 50890351 GAGGGAGTCACTGCAGGGA-------ACAGGGGACACTGGCATTCCGTTTGTCAGAGCATCCTGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttctgtttg------------tttttttttttgagacagagttttgctcttgttgcccaggctggagtgca-----gtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacgaggtttctccctgttggtcaggttggtcttgaactcctgatctcaagagatcccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgcccagccGCTGAATTTCTTTTGTAGACAAGTCCTATGGTCTCTTCTAGGTTCTAAGTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATC---TCTTCTTTAACAGGATGGCCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875308 524 + 49145316 GAGGGAGTCACTGCAGGAA-------ACAAGGGACAATGCCATTCCATTTGTCAGACCATCCCAGATGACACAGGAGGTGGGAGAA--ACAAGCTAAATTTCTTCGTA------------Atttttttcctgaggcagagtctggctc-tgtcatccaggctggagtgcagtggcgctatctcagctcactgaaacctccgcctccc--------aggttcgagtgattctcctgcctcagcctcctgagtagctgggattacatgtacgcaccaccacacctagctaattttttgtatttttaatagagacggggtttcaccgcactagccaggatggtctcgatctcccgacctca--tgat-----ccgcctcggcctcacaaagtgctgggattacaggcgtgagccaccacccctggccACTAAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTATGTTTGTGCAACTTACTGCAAACCATACTTTTAACAGCTCTAGTCTTTTCTGAAAAGACCTCTCCTTCTCTAATAGAACGGCCTTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19992778 4 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M a score=170769.000000 s hg38.chr19_GL949748v2_alt 893476 75 + 1064304 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATAACC s panTro4.chr19 59833772 75 + 63644993 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATAACC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283885 76 - 106955855 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCAGGGAAGCCATTCAAAATAGTTAATAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572639 73 + 64156825 GAAATATTTTTTTTTTCTACTTTGGTC-------------TTTCTTCCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699047 73 + 59248254 GAAATATTTTTTTTTTCTACTTTGGTC-------------TTTCTTCCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811649 73 + 51301725 gaaatattttttttttctactttggtc-------------tttcttccctttctctgca-ggAAGCCATTCAAAATAGTTAATGACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528077 72 + 50890351 GAAATA-TTTTTTTTTCTACTTTGGTC-------------TTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875832 75 + 49145316 GAAATA--TTTTCTTCCTACTCTGGGCCT---------TATTTCTTCCCTTTCTCTGCA-GGGAAGCATTCaaaatagttaataacc i calJac3.chr22 C 0 I 160 s canFam3.chr1 19992782 83 - 122678785 GGAACA--TTTCCTTCCTAGTTTGGTCTTTGTCTCTAGTTCTTCTTTCCTTT-GCTGCA-ATATATCATTCAAGATATTTAACAACT i canFam3.chr1 I 4 C 0 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=103809.000000 s hg38.chr19_GL949748v2_alt 893551 38 + 1064304 AATATAGAATAGGTCTGTATCAAATGGTTCAGGAGGCA s panTro4.chr19 59833847 38 + 63644993 AATATAGAATAGGTCTGTATCAAATGGTTCAGGAGGCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283961 38 - 106955855 AATATAGAATAGGTCTATACCAAATGGTTCAGGAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572712 38 + 64156825 AATATAGAATAGGTTTGTATCGAATGGTTCAGGAGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699120 38 + 59248254 AATATAGAATAGGTTTGTATCGAATGGTTCAGGAGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811722 38 + 51301725 AATATAGAATAGGTCTGTATCGAATGGTTCAGGAGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528149 38 + 50890351 AATATAGAATAGGTCTGTATCGAATGGTTCAGGAGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45876067 38 + 49145316 AATATAGAATAGGTCTGAATCAAATGGTTCAGGAGGCA i calJac3.chr22 I 160 C 0 s canFam3.chr1 19992865 38 - 122678785 AGTACAGAATAGGCATTTATCAAGGGGAACATGAGCCA i canFam3.chr1 C 0 I 79 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=437001.000000 s hg38.chr19_GL949748v2_alt 893589 199 + 1064304 TTGTGGCAACAACCAGTTGTAGAGAAGCAGCTTTATAAGTGAATCCTgccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaactCggccaggcacggtggct s panTro4.chr19 59833885 199 + 63644993 TTGTGGCAACAACCAGTTGTAGAGAAGCAGCTTTATAAGTGAATCCTgccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggcgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattCggccaggcacggtggct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283999 192 - 106955855 TTGTGGCAACAACCAGTCATAGAGAAGCACC-------GTGAATCCTgccgggcacggtggctcacacctgtaatcccaacactttgggaggctaaggcaggcagatcacctgaggtcaggagttcgagaccagccttgccaacacaattaaaccccatctctactaaaaatacaataattCAgccaggcacggtggct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572750 198 + 64156825 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtaaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699158 198 + 59248254 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811760 198 + 51301725 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTGCCGGGGGCGGTGgcttatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtgtggtggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528187 198 + 50890351 TTGTGGCAACAACCAGTCGTAGAGAAATAGCTTTGTAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45876105 199 + 49145316 TCGCGGCCACAACCAGTCACAGAGAAGCAGCTTTGTAAGTGAATCCTgctgggcgcggtgactcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattcagcccgacacagtggTT i calJac3.chr22 C 0 I 2755 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M a score=31152.000000 s hg38.chr19_GL949748v2_alt 893788 17 + 1064304 catgcctgtaatcccag s panTro4.chr19 59834084 17 + 63644993 catgcctgtaatcccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284191 17 - 106955855 catgcctgtaatcccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572948 17 + 64156825 tgtgcctgtaatcccag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699356 17 + 59248254 tgtgcctgtaatcccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811958 17 + 51301725 tgtgcctgtaatcccag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528385 17 + 50890351 tgtgcctgtaatcccag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I a score=430.000000 s hg38.chr19_GL949748v2_alt 893805 1 + 1064304 c s panTro4.chr19 59834101 1 + 63644993 c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284208 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572965 1 + 64156825 c i rheMac3.chr19 C 0 I 422 s macFas5.chr19 55699373 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811975 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528402 0 + 50890351 C a score=51456.000000 s hg38.chr19_GL949748v2_alt 893806 134 + 1064304 actttgggaggccaaggtgggaggatcacctgaggtcaggagttcgaga-------------------------------gcagcctggccaacatggtgaaaccacatctc-------------tactaaaaatataaaaattagccaggtatg--gtggcgtgtgcttgtaatcccag s panTro4.chr19 59834102 106 + 63644993 actttgggaggccaaggtgggaggatcacctgaggtcaggagttcgaga-------------------------------gcagcctggtcaacatggtgaaaccacatctc-------------tactaaaaatacaaaaattag------------------------------ccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284209 133 - 106955855 actttgggaggccaaggcgggaggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacacaatgaaaccccatctc-------------tactaaaaatacaacaattagccaggtatg--gtggcgtgtgcttgtgtc-ccag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699374 180 + 59248254 tacttaggaggctgaggcaggagaatagcttgaacccgcgaggcagaggctgcagtgagccaagatcgcaccactgcactccagcctgggtgatagagcaagactctgtctcaaaaaataaataaaaatacaaatacaaaaattagccaggcatgatgtgggacttgtctgtgatctcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811976 177 + 51301725 tacttgggaggctgaggc---agaatagcttgaacccgcgaggcagaggctgcagtgagccaagatcgtaccactgcactccagcctgggtgatagagcaagactctgtctcaaaaaataaatacaaatacaaatacaaaaattagccaggcatgatgtgggacatgtctgtgatcccag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528402 0 + 50890351 C e rheMac3.chr19 60572966 422 + 64156825 I a score=53428.000000 s hg38.chr19_GL949748v2_alt 893940 49 + 1064304 ctactcaggaggctgaggcaggagaatagcttgaacccgggaggcggag s panTro4.chr19 59834208 49 + 63644993 ctactcaggaggctgaggcaggagaatagcttgaacccgggaggcggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284342 47 - 106955855 ctact-aggaggctgaggcaggagaatagcttgaacccaggaggcaga- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699554 49 + 59248254 ctactcaggaggctgaggcaggagaatcacttaaacccagaaagcagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812153 49 + 51301725 ctactcaggaggctgaggcaggagaatcacttgaacccagaaagcagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528402 49 + 50890351 ctactcgtgagactgaggcaggagaatcacttgaacccagaaagcagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60572966 422 + 64156825 I a score=204147.000000 s hg38.chr19_GL949748v2_alt 893989 133 + 1064304 gctgcagggagccaagatcgcaccactgcactccagcctacgtgacagagcaagattctgtctcaaaaaaaaaaagaaaaaaaaaa---aata--aGTGACTCCTGGCTGCATCCCAACCATACCCCAATTCCTTCTA s panTro4.chr19 59834257 129 + 63644993 gctgcagggagccaagatcgcaccactgcactccagcctatgtgacagagcaagattctgtctcaaaaaagaaaag----aaaaaa---aata--aaTGAGTCCTGGCTGCATCCCAACCATACCCCAATTCCTTCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284389 129 - 106955855 gctgcagggagccaagatcgcaccactgcactccaacctgggtgacagagcaagactctgtctcaaaaaaaagaaa----ataaaa---aaaa--aGTGAGTCCTGGCTGCATCCCAACCATACCCCAATTCTTCCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60573388 129 + 64156825 gctgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaaga--ctgtctcaaaaaaaataaa----agaaaa---aataataaTGAGTCCTGGCTACATCCCAACCACGCCCCAATTCCTCCTA i rheMac3.chr19 I 422 I 1283 s macFas5.chr19 55699603 129 + 59248254 gctgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaaga--ctgtctcaaaaaaaagaaa----agaaaa---aataataaTGAGTCCTGGCTGCATCCCAACGACGCCCCAATTTCTCCTA i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47812202 129 + 51301725 gctgcagtgagccgagatcacaccactgcactccagcctgggtgatagagcaaga--ctgtctcaaaaaaaagaaa----agaaaa---aataataatgagtcCTGGCTGCATCCCAACGACGCCCCAATTCCTCCTA i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47528451 134 + 50890351 actgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaagactctgtctcaaaaaaaagaaa----gaaaaaaGTAATAATAATGAGTCCTGGCTGCATCCCAACCACGCCCCAATTCCTCCTA i chlSab2.chr6 C 0 I 56 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I a score=33908.000000 s hg38.chr19_GL949748v2_alt 894122 70 + 1064304 ACCACAGAATTATTCCATCTTCTCTTCCtttttttt---------ttttttctttttttttgtttgttttgttGGGACA s panTro4.chr19 59834386 79 + 63644993 ACCACAGAATTATTCCATCTTCTCTTCCttttttttttttttttcttttttttttttttttgtttattttGTTGGGACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284518 57 - 106955855 ACCACAGA---ATTCCATCTTCTCTTCCtttttttt-------------------ttttttgtttgttttgttGGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699741 57 + 59248254 ACCACAGA---ATTCCATCTTCTTtttgttttttgt-------------------ttttgtttttgttttgttgggacg i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47812340 49 + 51301725 ACCACAGA---ATTccatcttc--------ttttgt-------------------ttttgtttttgttttgttgggacG i papAnu2.chr19 I 9 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528585 56 + 50890351 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=40217.000000 s hg38.chr19_GL949748v2_alt 894192 155 + 1064304 GAATTTCACtttttttttttttaatgtaagttttagggtacatgtgcacaacgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacattaggtatatctcctaatgctatcccttccccc s panTro4.chr19 59834465 155 + 63644993 GAATTTCACtttttttttttttaatgtaagttttagggtacatgtgcacaacgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacattaggtatatctcctaatgctatccctcccccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284575 154 - 106955855 GAATTTCAC-ttttttttttttaacataagttttagggtacatgtgcacaacgtacaggttagttacataagtatatatgtgccatgttggtgtgctgcacccactaactcctcatttaacattaggtgtatcttctaatgctatccctcccccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528585 56 + 50890351 I e papAnu2.chr19 47812389 0 + 51301725 C e macFas5.chr19 55699798 0 + 59248254 C e rheMac3.chr19 60573517 1283 + 64156825 I a score=147890.000000 s hg38.chr19_GL949748v2_alt 894347 118 + 1064304 gagtttcacttttgtcacccaggctggaatgcagtggtgcaatcttggctcactgccacctccacctccagggttcaaatgattctcctgcctcagcctcctgaatagctgggattat s panTro4.chr19 59834620 118 + 63644993 gagtttcacttttgtcacccaggctggaatgcagtggtgcaatcttggctcactgccacctccacctccagggttcaaatgattctcctgcctcagcctcctgaatagctgggattat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284729 118 - 106955855 gagtttcacttttgtcactcagggtggaatgcagtggtgcagtcttggctcactgccacctccacctccagggttctagtgattctcctgcctcagcctcctgaatagctgggattac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699798 118 + 59248254 gaggttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagcgattctcctgcctcagcctcctgaatagctgggactac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812389 118 + 51301725 GAggttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagcgattctcctgcctcagcctcctgaatagctgggactac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528641 118 + 50890351 gagtttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagggattcgcctgcctcagcctcctgaatagctgggactac i chlSab2.chr6 I 56 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=992123.000000 s hg38.chr19_GL949748v2_alt 894465 599 + 1064304 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgtgagtcaccgtacccggccACCATCTTTGCTTCTTTATCCACACCTTGCcttgttcttcagggctctgcagagatatcatttcctcca--ag---------agtttccacaactccgactt--cacaaagatagcac--------ttttttttt---------tttttttgagac--agtctcactctgtagcccaagctggcgtgcagtggcacaatctcagctcactgcaaccttcgcctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcgcgcgccaccacacccggttaa-ttttttttgcatctttagtagaggtagggtttcatcatgttgccctgggtggtctcaaactcctgagttcaggtgatccccccgccttggcctctcaaagtgctaggattacaggcgtgagccactgcgcccagccaagacaacactttcctcatcccaaagcacctgttaa s panTro4.chr19 59834738 607 + 63644993 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgtgagtcaccgtacccggccACCATCTTTGCTTCTTTATCCACACCTTGCcttgttcttcagggctctgcagagatatcatttcctcca--ag---------agtttccacaactccgactt--cacaaaggtagcacttttttttttttttttt---------tttttttgagac--agtctcactctgtagcccaagctggcgtgcagtggcacaatctcagctcactgcaaccttcgcctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcacgtgccaccacacccggttaa-ttttttttgcatctttagtagagatagggtttcgtcgtgttgccctgggtggtctcaaactcctgagttctggtgatccccccgccttggcctctcagagtgctaggattacaggcgtgagccactgcgcccagccaagacaacactttcctcatcccaaagcacctgttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56747736 601 + 60714840 aggcatgcaccaccatgcccagctgatttttgtatttttagtagaaatgggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcagcctcccaaagtgctgggattacaggtgtgagtcaccgcgcccggACACCAtcttcgcttctttatccataccttgccttgttcttcagggctctgcagagatatcatttcctccaagag---------agtttccacaactccaactt--cacaaaaatagctc-------tttttttttt---------tttttttgagacagagtctcactctgtagcccaagctggagtgcagtggcgcaatctcagctcactgcaaccttcacctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcacgcgccaccacacccggttcatttttttttgcatttttagtagagatggggtttcatcatgttgccctgggtggtctcaaactcctgagctcaggtgatccccccaccttggcctcccaaagtgctgggatcacaggcgtgagccactgc-----gccaagacaacacttttctcatcccaaagcacctgttaa i ponAbe2.chr19 M 1634 C 0 s nomLeu3.chr10 103284847 600 - 106955855 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccggccACCAtcttctcctctttatccgcaccttgccttgttcttcagggctctgcagaggtatcatttcctccaagag---------agcttccacagctctgactt--cacgaagacagcac-----------gttttt---------tttttctgagacagagtctcactctgtagcccaagctggagtgcagtggcgcaatctcagctcactgcaaccttcgcctctggggctccagcgactctccttcctcagcctcccaagtagctgggactagaggcacgcgccaccacacccggttaa-ttttttttgcatttttagtagagatggggtttcatcatgttgccctgggtggtctcaaactcctgagctcaggtgatccccccgccttggcctcctaacgtgctgggattacaggcatgagccaccaggcctggccaagacaacacttttctcatcccagagcacctgttaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699916 601 + 59248254 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcatgttggccaggctggtctcgaactcctgacttcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgggagccaccacgcctggccACCGTTCTCTCTTCTTTATCCATACCTTGCCTTGTTCTTCAGGGCTCTGCGTAGGTACCATTTCCTCCAAGAG--------TTATGGAAATAACTCTGACTTCACACAAAGACAGCAC---------tttttttt-----gttgtttttttgagacggagtctcactgtgtagcccaagctggagtgcagtggttcagtctcagctcactgcaaccttcgcctctggggctcaagcgattctctttgctcagcctcccaagtagctgggactagaggcacgcgccaccacacc--gttaa-ttttttgtgtgtttttagaagagatggggtt---tcatgttgccctgggtggtcttgaactcctgagctcaggtgatcgccctgccttgacctcccaaagtgctgggattacaggtgtgagccaccatgcctggccAAG---ACACTTTTCTCATCCCAAAGCACCTGCTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812507 601 + 51301725 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcacgttggccaggctggtctcgaactcctgacttcaggtgatccaccagcgtcggcctcccaaagtgctggaattacaggtgtgagccaccacgcctggccaccgTTCTCTCTTCTTTATCCATACTTTGCCTTGTTCTTCAGGGCTCTGCGTAGATACCATTTCCTCCAAGAG---------AGTTTCCATAACTCTGACTTCACACAAAGAcagcac---------ttttttgt---------tttttttgagacggagtctcactgtgtagcccaagctggagtgcagtggttcaatcttagctcactgcaaccttcgcctctggggctcaagcgattctctttgctcagcctcccaagtagctgggactagaggcacgcgccaccatacccagttaa-ttttttgtgtgtttttagaagagatggggtttcatcatgttgccctgggtggtcttgaactcctgagctcaggtgatcgccctgccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccaag---acacTTTTCTCATCCCAAAGCACCTGCTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528759 619 + 50890351 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcatgttggccaggctggtcttgaactcctgacttcaggtgatccaccagcctcggcctcccaaagtgcgggaattacaggtgtgagccaccgcgcctggccACCGTTCTCTCTCCTTTATCCATACCTTGCCCTGTTCTTCAGGGCTCTGCATAGATACCATTTCCTCCAAGGGAGATACCATTTCCTCCATAACTCTGACTTCACACAAAGACAGCAC---------ttttttttgttttgttttttttttgagacagagtctcactgtgtagcccaagctggagtgcagtggttcaatctcagctcactgcaaccttcgcctctggggctcaagcgattctctttcctcagcctcccaagtagctgggactagaggcacgcgccaccacactcagttaa-ttttttgtgtgtttttagaagagattgggtttcatcatgttgccctgggtggtcttgaactcctgaggtcaggtgatcgccctgccttggcctcccaaagtgctgggattacaggtgtaagccaccatgcctggccAAG---ACACTTTCCTCATCCCAGAGCACCTGCTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=375173.000000 s hg38.chr19_GL949748v2_alt 895064 185 + 1064304 ttccctgtaacagcacttgaaccctgattcggcatgcatgtccattttcctgcctctaccgtgaactcgtgtgaattga-tctatgtcagatttagtggctgcattcacagctcccgcaactataacggggttctcgggaaatatatatcaaatgagtgaatGTATATAC-GGGGCTGTGGCACAGC s panTro4.chr19 59835345 185 + 63644993 ttccctgtaacagcacttgaaccctgattcggcatgcatgtccattttcctgcctctaccgtgaactcgtgtgaattga-tctatgtcagatttagtggctgcattcacagctcccgcaactataatggggttctcgggaaatatatatcaaattagtgaatGTATATAC-GGGGCTGTGGCACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748337 185 + 60714840 ttccctgtaacagcacttgaaccctgatttggcatgcacgtccatcttcctgcctgtactgtgagctcctgtgacttga-tctatgtcagatttagtggctgcgttcacagctcccgcaactataacagggttctcgggaaatatatatcaaatgagtgaatGTATATAT-GGGGCTGTGGCACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285447 181 - 106955855 ttccctgtaacagcacttgaaccctgattcg----gcacatccattttcctgcctctactgtgaactcgtgtgaattga-tctatgtcagatctagtggctgcgttcacagctcccgcaactataacagggttctcgggaaatacatatcaaatgagtgaatGTATATAC-GGGGCTGTGGCACAGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700517 186 + 59248254 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCTCCGCCGTGAACGCGTGTGAATTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCCGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813108 186 + 51301725 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCTCCGCCGTGAACTCGTGTGAACTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCCGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47529378 186 + 50890351 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCCCCGCTGTGAACTCATGTGAATTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCTGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19992982 184 - 122678785 TCCCCTATAACAGCACAGGGGCTCTAACACTGCATACATATCCATTTTCCTGACTCTACAGTGAACTTGTGTGAATTTAGCCCATGTGGTGTCTGGTGGCTGTGCTCACAGCTCTTGCCAC--TAAGAAAGTCCCCCAGAAATATACGTCAGGTCAATGAGTATATAAAT-GAGGCTGTAGCACAGC i canFam3.chr1 I 79 I 150 e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=370166.000000 s hg38.chr19_GL949748v2_alt 895249 192 + 1064304 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATATACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCGGTCAAATTTATTCTCTAAATCTGATTTTTCCATTAAATAGcag s panTro4.chr19 59835530 189 + 63644993 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAA---CTACT-TATCAACCCATTTATATACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCATTAAATAGcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748522 192 + 60714840 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCACCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATATACTCATTGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285628 177 - 106955855 CTGCA---------------------------------------ACT-------------TATGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATGTACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAA--CTGATTTTTCTGTTAAATatcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700703 191 + 59248254 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCACCACATGGG-CCCCACACCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813294 191 + 51301725 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCACCACATGGG-CCCCACACCCTCCCGTTATTCTGGTGCCTCATGCCGGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATATCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47529564 191 + 50890351 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCACTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCATCACATGGG-CCCCACACCCTCCCACTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19993316 223 - 122678785 ctgcaggcagacactcaaccactgagccatccaggtgccccAGCACCTGAGACTCCTGATTATGGTCCTTAAAATGCTGTCTGGACC---------CTTTGTTCCTTACAAATTTTTATTCTATCAACCCATTAATATAACCATTATAGGGGTCCCTTCCCCCCACCAGTAATCTGACACCCCACATGGCTGAAACCCATTCTTTAAATCTGAGCTTTATGTTATATATCAG i canFam3.chr1 I 150 I 8686 e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=345796.000000 s hg38.chr19_GL949748v2_alt 895441 204 + 1064304 cctggccaacacggtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggcttgcacccgtaatctcagctactcgggaggctgaggcagcagaatcacttgaacccgggaggcagaggttgtggtaagccgagattgcaccactgcactccagcctggtaacagagcgagactccctctcaaaataaat s panTro4.chr19 59835719 204 + 63644993 cctggccaacacggtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggcttgcacccgtaatctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgtggtaagccgagattgcaccactgcactccagcctggtaacagagcgagactccctctcaaaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748714 204 + 60714840 cctggccaacacggtaaaaccccatctctactaaaaagtacaaaatattagccaggcgcagtggctcgcacccctaatctcagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgtggtgagccgagattgcgccactgcactccagcctggtaacagagtgagactccgtctcaaaataaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285805 204 - 106955855 cctggccaacacagtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggctcgcacccgtaatctcagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcagggggggtggtgagccgagattgcgccactgcactccagcctggtaacagagcgagactccgtctcaaaataaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700894 202 + 59248254 cctgg-caacacgatgaaaccccgtctctactaaaaa-tacaacatattagccgggcgcagtgtctcgcacccgtaatctcagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggtggaggttgcagtgagccgagctcacgccactgcactccagcctggtaacagagcgagactccatctctaaataaat i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47813485 202 + 51301725 CCtgg-caacacgatgaaaccccgtctctactaaaaa-tacaacatattagccaggcgcagtgtctcgcacccgtaatctcagctactcgggatgctgaggcagaagaatcgcttgaacctgggagttggaggttgtggtgagccgagatcacgccactgcactccagcctggtaacagagcgagactccatctctaaataaat i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47529755 202 + 50890351 cctgg-caacacaatgaaaccccgtctctactaaaaa-tacaacatattagccgggcgcagtgtctcgcacccataatctcagcaactaaggaggctgaggcaggagaaccgcttgaacccgggaggtggaggttgcggtgagccaagatcacgccactgcactccagcctggtaacagagcgagactccgtctctaaataaac i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=344433.000000 s hg38.chr19_GL949748v2_alt 895645 142 + 1064304 aaaCTGCTGACTCGCGTATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGgcacctgtaatcctagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtgagccaaaatcgtgcc s panTro4.chr19 59835923 142 + 63644993 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGgcacctgtaatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtgagccaagatcgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748918 142 + 60714840 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCCAACTCATTCCTTATATGTAAgcacctgtaatcccagctactcacaagggtgaggcaggagaatggcttgaacctgggaggcggaggttgcggtgagccgagatcgtgcc i ponAbe2.chr19 C 0 I 2137 s nomLeu3.chr10 103286009 142 - 106955855 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCTAACTCATTCCTTACATGTAGgcacctgtaatcccagctactcagaaggctgacgcaggagaatcgcttgaagctgggaggcggaggttgcggtgagccgagatcgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60574800 142 + 64156825 AAACTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggtcgcggtgagctgagatcgcacc i rheMac3.chr19 I 1283 C 0 s macFas5.chr19 55701112 142 + 59248254 aaaCTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggtcgcagtgagctgagatcgcgcc i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47813703 142 + 51301725 aaactgctgacttgcatattttttctttacccCAACTCATTCCTTACATGTagacacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcggtgagctgagatcgcgcc i papAnu2.chr19 I 16 C 0 s chlSab2.chr6 47529961 142 + 50890351 aaaCTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcacttgcacctgggaggcggaggtcgcagtaagctgagatcgcgcc i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I a score=264156.000000 s hg38.chr19_GL949748v2_alt 895787 172 + 1064304 actgcactccagcctgggcgacagagcgagactccatctc--aaaaaaaaaaaaaaaaaaaCCACATAGGCTCAGTCTTTTCAGTATCTGCTTTACTGGTTCAGTAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------TGAATGTTATTGAACTGTATTTTGTTCACTTTATTGTA s panTro4.chr19 59836065 171 + 63644993 actgcactccagcctgggcgacagagcgagactccatctc---aaaaaaaaaaaaaaaaaaCCACATAGGCTCAGTCTTTTCAGTATCTGCTTTACTGGTTCAGTAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------TGAATGTTATTGAACTGTATTTTGTTCACTTTATTGTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103286151 174 - 106955855 actgcactccagcctgggcgacagagcgagactccatctcgaaaacaaaacaaaaaaaaaaCCACATAGGCTCAATCTTTTCAGTATCTGCTTTACTGGTTCAGCAAAAGCCAGGAAACATGACTTTGTGGTAATC------------------------------CGAATGCTATTCAACTGTATTTTATTTACTTTATTGTA i nomLeu3.chr10 C 0 I 898 s rheMac3.chr19 60574942 163 + 64156825 acagcactccagcct-ggtgacaaagcgagactccatctc--------aaaaaaaaaaaaa--GTGTAGGCTCAATCTTTTCAGTATTTGTTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55701254 165 + 59248254 actgcactccggcct-ggtgacaaagcgagactccatctc------aaaaaaaaaaaaaaa--GTGTAGGCTGAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813845 168 + 51301725 actgcactccggcct-ggtgacaaagtgagactccatctc---aaaaaaaaaaaaaaaaaa--gtgtaggctCAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530103 195 + 50890351 actgcactccggcct-ggtgacaaagcgagactctatctc------aaaaaaaaaaaaaaa--GTATAGGCTCAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATTGTGTTTTTCAACCGTGAGTGTTGTAAGTGGTAAGTGTTATTCAACTGTATATTGTTTACTTTATTGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I a score=363439.000000 s hg38.chr19_GL949748v2_alt 895959 342 + 1064304 AATACTAGTGAACAGTG---AATAAATGGTTGTATATTCCTAATaagaaaaaaa-aaaaaaaagacccaaagtacagcgagctgatgccgatctcatttcgcagaggtccgcctgctctcccctctccaagagtgtaatcctatgcttaataaacttatgccgctttgctatgtgtgtgtatcacacccaattctttgttcgaaacaccaagggcctggaacttcacagctttggctggtaac--GGGGAGCAGGGGTAAAGACATTTAAAAGCTGCT--TGtgttaaccataatcgccatcccat-atatcagacccccagaactaactcatcttataactgaata-----ttgt s panTro4.chr19 59836236 344 + 63644993 AATACTGGTGAACAGTG---AATAAATGGTTGTATATTCCTAATaag-aaaaaa-aaaaaaaagacccaaagtacagcgagctgatgccgatctcatttcacagaggtccgcctgctctcccctctccaagagtgtaatcctatgcttaataaacttatgccgctttgctatatgtgagtatcacacccaattctttgttcgaaacaccaagggcctggaacttcacagcttcagctggtaacaGGGGGAGCAGGGGTAAAGACATTTAAAAGCTGCT--TGtgttaaccataatcgccatcccgt-atatcagacccccagaaccaactcatcttataactgaata----cttgt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575105 332 + 64156825 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG------GAAAAaaaaagacccgaagtacagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctcc--gagtgtaatcctgtgcttaataaactgctgctgctttgctaggtgtgtgtatcacaacccatgctttgttcacaccaccaaggacccaggacttcacaccttcagctggtaa---------caGGggtaaggacatttaaaacctgct--cgtgttaaccataatcgtcatcgtgtaacattggatccccagaagtaactcatcttataactgaatactgt----- i rheMac3.chr19 C 0 I 36 s macFas5.chr19 55701419 327 + 59248254 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG------G-AAAaaaaagacccgaagtacagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctcc--gagtgtaatcctgtgcttaataaactgctgctgctttgctaggtgtgtgtatcacgacccatgctttgttcacaccaccaaggacccaggacttcacaccttcagctggtaa---------caGGGGTAAGGACATTTAAAACCTGCT--CGtgttaaccataatcgtcatcatgtaacattggatccccagaagtaactcatcttataactgaata--------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814013 323 + 51301725 AATACTGGTGAACA-TGGTCAATAAATGGTTGTATATCcctaattag------g-aaaaaaaagaccCGAAGTACAGCAAACTGACGCCGATCTCATTTTGCAGAGGTCCGCCTGCTCTCCCCTCTCC--GAGTGTAATCCTGTGCTTAATAAA---CTTCTGCTTTGCTAGGTGTGTGTATCACGACCCATGCTTTGTTCACACCACCAAGGACCCAGGACTTCACACCTTCAGCTGGTAA---------CAGGGGTAAGGACATTTAAAACCTGCT--TGTGTTAACCATAATCGCCATCGTGTAACATTGGATCGCCAGAAGTAACTCATCTTATaactgaata--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530298 339 + 50890351 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG--------AAAaaaaagacccgaagtatagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctctgagagtgtaatcctgtgcttaataaacttctgctgctttgctaggtgtgtgtatcacgacccatgctttgttcacaccaccaaggacccaggacttcacagcttcagctggtaacaGGGGAAGCAGGGGTAAGGACATTTAAAACCTGCTTGTGtgttaaccgtaatcgccattgtgtaacattgggtccccagaagtaactcatcttataactgaata--------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=377.000000 s hg38.chr19_GL949748v2_alt 896301 9 + 1064304 gc--ttttttt s panTro4.chr19 59836580 11 + 63644993 gcttttttttt i panTro4.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I e chlSab2.chr6 47530637 0 + 50890351 C e papAnu2.chr19 47814336 0 + 51301725 C e macFas5.chr19 55701746 0 + 59248254 C e rheMac3.chr19 60575437 36 + 64156825 I a score=341851.000000 s hg38.chr19_GL949748v2_alt 896310 285 + 1064304 ttttttttttttttgagacgaagtcct--gctctgtcacccaggctggagtgcagtggcgcgatcttgact--ctgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagtgcgtgccaccacgcccggctaatttttgtatttttagtagagacggggtttctccatgttggtctcaaactcctggtctcaggtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccaccacacccagct s panTro4.chr19 59836591 287 + 63644993 ttttttttttttttgagacgaagtcct--gctctgtcacccaggctggagtgcagtggcgcgatcttgactcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagtgcgtgccgccacgcccggctaatttttgtatttttagtagagacggggtttctccatgttggtctcaaattcccgatctcaggtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccaccacacccagct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575473 285 + 64156825 ctttttttttttttgagatcaagtc----tctctctctctcaggctggagttctgtggcacgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaattttcgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgccgggatgacagacaggagccaccacgcccagct i rheMac3.chr19 I 36 C 0 s macFas5.chr19 55701746 283 + 59248254 ctttttttttttttgagatcaag------tctctctctctcaggctggagttctgtggcgcgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaattttcgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgccgggatgacagacaggagccaccacgcccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814336 288 + 51301725 -cttttttttttttgagatgaagtctctttctcactcactcaggctggagttctgtggcgcgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgccttggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaatttttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgctgggatgacagacaggagccagcacgcccagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530637 280 + 50890351 ---cttttttttttgagacgatg------tctctctcactcaggctggagctctgtggcgcgatctcagctcactgcaacctctgcctcctgggttccagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcaagccaccacgcccagctaatttttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgacctcaggtgatccacccacctcggcctcctaaagtgccgggatgacagacaggagccaccacgcccagct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=880354.000000 s hg38.chr19_GL949748v2_alt 896595 586 + 1064304 acttgtgctttttgaccaacatcttcctctcctaccacccccag-cccctgataacctccacctactctcac----ttctaggagatcaactgttctattttttttttttttttttttttttt------gagtctcgctctgcacacccaggctggagtgcagtgctgcaatctcggatcactgcaacctccgctttccgggttcaagcgattctcctgcctcagcctccagagtcgctgggattac-----tgagccaccgcgcccagccaGAAGACCCAC-------------------------------------------GCTCCCTAAGACATAACCCACACTGGTGGCCTTTGTtctgacttctcacctgtgctccccacccgctagaaactggcttctctccccacacttcctctgaagctgtctgtgtgaccaacactaatgagcttccttcctggaacatgcagtgacccttttcagcccttctcattattgctcccccacagttgtatttgacacgttgaccacttcctcctcgaaggactcacttctctggctttctcggacacttcttgctactcgttttcTGACGGT---TACAGTACCAACAGG-TTTGCAGGCACCTCCACCACCAGAGCCaa s panTro4.chr19 59836878 580 + 63644993 a------ccttttgaccaacatcttcctctcctaccacccccagccccctggtaacctccacctactttcac----ttctaggagatcaactGttcta--ttttttttttttttttttttttt------gagtctcgctctgcacacctaggctggagtgcagtgctgcaatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagccaGAAGACCCAC-------------------------------------------GctccctaagacataacccacactggcggcctttgttctgacttctcacctgtgctccccacccgctagaaactggcttctctccccacgcttcctctgaagctgtctgtgtgaccaacactaatgagcttccttcctggaacacgcagtgaccctgctcagcccttctcattattgctcccccacagttgtatttgacacgttgaccacttcctcctcgaaggactcacttctctggctttctcggacacttcttgctactcgttttcTGACGGT---TACAGTACCAACAGGTTTTACAGGCGCCTCCACCACCAGAGCCaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575758 593 + 64156825 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgccacctagtcttgc----ttct---aGATCAACCAC--------------tttttttttttttttgagacggagtcgcgctcggcacacccaggctggagtgcagtgctgccatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagcCAGGAGACCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCT---GGGGGCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGCTCTGACCTCTCACCTGTGGTCCCCACCTGCTGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACATTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGTGACTCGTTTTCTGACAGT-------------------TTTACCGGCACCCCCACCACCAGAGCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55702029 608 + 59248254 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgccacctagtcttgcttctTTCT---AGATCAACCCCttt---tttttttttttttttttttttttgagacggagtctcgctctgcacacccaggctggagtgcagtgttgccatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagcCAGGAGACCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCT---GGGGGCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACCTGTGGTCCCCACCTGCTGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACATTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGTGACTCGTTTTCTGACAGT-------------------TTTACCGGCACCCCCACCACCAGAGCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814624 615 + 51301725 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgcCACCTAGTCTTGC----TTCTAGGAGATcaaccac--------------tctttttttttttttgagacggagtctcgctctgcacacccaggctggagtgcagtgctgctatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcacccagccaggagaTCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCC--AGGGGGCCATGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACATGTGGTCCCCACCTGCTGGAAACCAGCTTCTCTACCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACGTTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGCGACTCGTTTTCTGACAGTTTTACCAGCACCAACAGG-TTTACCGGCACCCCCACCGCCAGAGccag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530917 604 + 50890351 acttgtgccttttgaccaacatcttcctctcctgccacgcccag-cccctggtaaccgccacctagtcttgc----ttct---aGATCAACCAt------------------tctttttttttgagatggagtctcgctctgcacgcccaggctggagtgcagtgctgcaatctcagatcactgcaacctctgcttcccgggttcaagcaattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgtgcccagcCAGGAGACCCACTCCCACTGACCCTCACTAGTCACGT---TCT----GGGTCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACATGTGGTCCCCACCCGATGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTCGTATTTCACACGTTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCTTCTCGGACACTTCTTGCGACTCGTTTTCTGACAGTTTTACCAGCACCAACAGG-TTTACCGGCACCCCCACCGCCAGAGCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45879059 613 + 49145316 acttctgcccattgaccaacatctcactccct--cctgccccag--cccggggaacctctacctactctcac----ttctaggagatcaacc----------------ttCCTCttttttttttaga--gggtctcactctgcacacccagcctggagtgcagtggcgcaatctcagctcactgcaacctccacttcccaggttgaagcgattctcctgcctcagcctccagagtaattgggattacaggcgtgagccaccgcgcccagcCAGAAGACCCACTCCCAGTGGCCCTCACTGGCC-CATGGCTCTGGGGGGGCCCGCGTTCCCTAAGGCATAACTCACACAGGCAGCCTTTGTTCTGACCTGTTGCGTGTGCTCCCCACCCGCTGGAAACTGGCCCCTCTCCCCACACCTGCTCTGAAGCTGTCTGTGTGACCAACGCTAATGAG----CTTCCTGGAACACACAGTGA-CCTGCTCAGCCGTTCTGATGACTGCTCCTCCACACTTGTATTTGACACATTGACCACTTCCTCCTCAAAGGAGTCAGTTCTCTGGTTCTCTCGGACACTTCCTGCTAGTCGTCTTCTGACGGT---TACAGCATGCACAGG-CTTACGGACGCCTCCAACACCAGAGCCGA i calJac3.chr22 I 2755 I 8977 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=127565.000000 s hg38.chr19_GL949748v2_alt 897181 107 + 1064304 tcccagctactcgggaggctgaggcaggagaatcgttcaaacccgggaggcagaggttgcagtgagtcgagattgcgccactgcactccagcctgagtgacagactg s panTro4.chr19 59837458 107 + 63644993 tcccagctactcgggaggctgaggcaggagaatcgttcaaacccgggaggcagaggttgcagtgagtcgagattgcgccactgcattccagcctgagtgacagactg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60576351 101 + 64156825 tcccagctactcgggaggctgaggcaggagaatcgctggaacccgggaggcagaggttgcaatgaaccgagattgtg------ctctccagcctgggtgacagactg i rheMac3.chr19 C 0 I 548 s macFas5.chr19 55702637 101 + 59248254 tcccagctacgcgggaggctgaggcaggagaatcgctggaacccgggaggcagaggttgcaatgaaccgagatcgtg------ctctccagcctgggtgacagactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47815239 107 + 51301725 tcccagctacgcgggaggctgaggcaggagaatcactggaacccgggaggcagaggttgcaatgaaccgagatcgtgccactactctccagcctgggtgacagactg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47531521 107 + 50890351 tcccagctacacgggaggctgaggcaagagaatcgctggaacccgggaggcagaggttgcaatgaaccgagatcgtgccactactctccagactgggtgacagactg i chlSab2.chr6 C 0 I 518 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=11690.000000 s hg38.chr19_GL949748v2_alt 897288 50 + 1064304 tga---ctcctcaaaaaaaaacaaaaacaaaaacaaaaaaaCTACagtcttgc s panTro4.chr19 59837565 48 + 63644993 tga---ctcctcaaatacaa--aaaaacaaaaacaaaaaaaCTACagtcttgc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55702738 41 + 59248254 agagtcctcctcaaaattaa--aaaaat----------aaaTTACAGTCTCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47815346 41 + 51301725 agagtcctcctcaaaattaa--aaaaat----------aaattacagtctcgc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=20405.000000 s hg38.chr19_GL949748v2_alt 897338 29 + 1064304 tctgtcgcccaggatgga----atgcagtggtg s panTro4.chr19 59837613 29 + 63644993 tctgtcgcccaggatgga----atgcagtggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287223 29 - 106955855 tttgtcactcagggtgga----atgcagtggtg i nomLeu3.chr10 I 898 C 0 s macFas5.chr19 55702779 33 + 59248254 TGTGTCAACCAGGATGGAATGCATGCAGTGgtg i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47815387 33 + 51301725 tgtgttgcccaggatggaatgcatgCAGTGGTG i papAnu2.chr19 C 0 N 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=58711.000000 s hg38.chr19_GL949748v2_alt 897367 322 + 1064304 ccatcttggctcactgcaacctctgcctgctggggtctagcgattctcctgcctcagccccccaaggagctgggactacaggcatgtgccgccacgcctggctaatttttgtatttttagtggagatgggggttttaccatgttagccaggttggtcttgaactcccgacctcatgtgatccgcccaccttggcctcccaaagtgcgaggattacag------gcccccgcacccagccTAGGATCCTGCACCTCTCTAGCCTagcagttctctgctgggtgattttgctctcca-----ctccagggg--acatttggcaatgcccatggtaat s panTro4.chr19 59837642 322 + 63644993 ccatcttggctcactgcaacctctgcctgctggggtctagcgattctcctgcctcagccccccaaggagctgggactacaggcatgtgccgccacgcctggctaatttttgtatttttagtggagacgggggttttaccatgttagccaggttggtcttgaactcctgacctcatgtgatccgcccaccttggcctcccaaagtgctaggattacag------gcccccgcacccagccTAGGATCCTGCACCTCTCTAGCCTagcagttctctgctgggtgattttgctctcca-----ctccagggg--gtatttggtaatgcccatggtaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287252 313 - 106955855 cagtcttggctcactgccacctccacctccagggttctagtgattctcctgcctcagcctcctgaatagctgggattacaggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccggcc-ACCATCTT-CTCCTCTTTATCC-----GCACTTTGC--------CTTGTTCTTCAGGGCTCTGCAGAGGTATCATT------TCCTCCAAGAGAG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=132624.000000 s hg38.chr19_GL949748v2_alt 897689 238 + 1064304 ttttaattgtcatgacttgg-ggaggggttctactggcatctggtaggtagggtccaggggtgctgctcagcttcctacaatgcccag-ggcagccccagatggcag----------------------cagcaccaaggctgagaaacactgGCTCATGC------------AGAAAGC---AACCACCTTACACCCTTCAGTGCAGGGACAAAGGCAGGGTTACGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT s panTro4.chr19 59837964 238 + 63644993 ttttaattgtcatgacttgg-ggaggggctctactggcatctggtaggtagggtccaggggtgctgctcagcttcctacaatgcccag-ggcagccccagatggcag----------------------cagcaccaaggctgagaaacactgGCTCATGC------------AGAAAGC---AACCAGCTTACCCCCTTCAGTGCAGGGACAAAGGCAGGGTTTTGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287565 238 - 106955855 CTTCCACAGCTCCGACTTgg-gaaggggctctaccggcatctagtaggtagggtccaggaatgctgctcagcttcctacaatgcccag-ggcagccccAGATGGCAG----------------------CAGCCCCAAGGCTGAGAAACACTGGCTCATCC------------AGAAAGC---AACCACCTTACACACTTCAGTGTAGGGACAAAGGCAGGGTTATGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55902572 276 + 59248254 tctttgttgtcataacctggcgcagggg--ctagtggcatcggctgggtagaggccagggaggcggctccacacccagcagcgctcagcagctgccccacaaggagaaggatctgccccaaaatgtggctagcgcccaggctgagaaaccctCACTCAAGACAATTTTCTGCGAGAAAACAATAACCACTTTAAACCATTCAATTTGAGGGCAAAGGCAGGGTTCCAAGTCCAAGGGCACTCTCCAAGCTCAGCTTAGGGTAGGACGTGTCTATTTTT i macFas5.chr19 N 0 N 0 s papAnu2.chr19 47991677 275 + 51301725 TTTTTGTTGTCATAACCTGGCGCAGGGG--CTAGTGGCATCGgctgggtggaggccagggaggcGGCTCCACACCCAGCAGCGCTCAGCAGCTGCCCCACAAGGAAAAGGATCGGCCCCAAAATGTGGCTAGCGCCCAGGCTGAGAAACCCTCACTCAAGA-AATTTTCTGCGAGAAAACAATAACCACCTTAAACCATTCAATTTGAGGGCAAAGGCAGGGTTCCAAGTCCAAGGGCACTCTCCAAGCTCAGCTTAGGGTAGGACATGTCTATTTTT i papAnu2.chr19 N 0 N 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=299668.000000 s hg38.chr19_GL949748v2_alt 897927 1191 + 1064304 Ctttcttattgtttttattcatttatttttcttgagacagagtcttgctctgtcgcccaggctggactgcagtggcgcgatctctgctcactgcaagctccgcctcccgggatcacaccattctc---------------------ctgggactacaggcgcccgccacctagcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgat---ctgacctcgtgatcctcccgcctcggcctctcaaagtgctgggattacaggtgtaagccaccgcacccggccTTATTCATTTATTTTTTGAGATAGAGTCTGAGCCCtttattttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgcaacaacctccgcctcccgggttcaagcgattctcccaccttggcctcccaaagtgctggcattacagacacccactaccatgcctggctaattttttgtacttttagtaagtaaagacagggtttcaccatcttggtcaggatggtctcgaactcctggcctcaagtgatcggcccgcctgggtctcccaaagtgatgagattacaggcgtgagcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttctgccctcccccttctgagactctgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggcacggtggcggtggctcacgcctgtaatcccatcactttgggggtgctgaggcaggtgtatcgcctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatagaaaaatacatagctgggtgtggtggcacgtgcctataatcccagctactagggaggctgaggttggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacaccattgcactctagcctgggcaacaagagcaaaactgtcttaaaaaaaaaaaaaaaaagtgagaacatatggattctactcctgttagaataatggcctccagctccatccaaattgctggaaatgacattatttcattccttctaatggctgaatagtattccatggtacatagacaccacgttttcttt s panTro4.chr19 59838202 1178 + 63644993 Ctttcttattgtttttattcatttatttttctcgagac--agtcttgctctgtcgcccaggctggactgcagtggcgcgatctcggctcactgcaagctccgcctcccgggatcacgccattctc---------------------ctgggactacaggcgcccgccacctagcccggctaattttttgtatttttaatagagacggggtttcaccatgttagccaggatggtctcgat---ctgacctcgtgatcctcccgcctcagcctctcaaagtgctgggattacaggtgtaagccaccgcacccggccTTATTCATTTATTTTTTGAGACAGAGTCTGAGCCC-----tttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgcaacaacctctgcctcccgggttcaagcaattctcccgccttggcctcccaaagtgctggcattacagacacccactaccatgcctggctaattttttgtacttttagtaagtaaagacagggtttcaccatcttggtcaggatggtctcgaactcctggcctcaagtgatcggcccgcctgggtctcccaaagtgatgagattacaggcgtgagcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttctgccctcccccttctgagactctgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggtacggtggcggtggctcactcctgtaatcccagcactttgggggtgctgaggcaggtgtatcgcctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatagaaaaatacatagctgggtttggtggctggtgcctataatcccagctactagggaggctgaggttggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacaccattgcactctagcctgggcaacaagagcaaaactgtctt---aaaaaaaaaaaaaagtgagaacatatggattctactcccattagaataatggcctccagctccatccaaattgctggaaatgac---atttcattccttctaatggctgaatagtattccatggtacatagacaccacgttttcttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287803 1186 - 106955855 Cttttttattgtatttattcatttattttttttgagacagagtctcgct-tgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccccagtagctgggactataggcgcccgccaccacgcccggctaattttttgtagttttagtagagacggggtttcaccgtattagccaggatggtctcaatctcctgacctcgtgatcctcctgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccTTATTCATTTATTTTTTGAGACAGAGTCTGAGCCAtttattttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgtaacaacttccgcctccccggttcaagcgattctcctgccttggcctcccaaagtgctgggattacagacacccactaccatgcccagctaattttttgtgtttttagtaagtaaagacagggtttccccatcttggtcaggctggtctcaaactcctggcctcaagtgagccacccgcctcggtctcccaaagtgatgggattacaggcatgcgcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttccgccctcccccttctgagcctttgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggcacggtggcggtggctcacgcctgtaatcccagcactttgggggtgctgaggcaggtgcatcacctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctaatgaaaatagaaaaatacatagctgggcgtggtggca------------------------ggaggctgaggttggtgaatcgcttgaacccaggaggcagaggttgcggtgagccaagatcacaccactgcactccagcctgggcaacaagagcgaaactgtctt----aaaaaaaaaaaaagtgagaacatatggattctactcctgttagaataatggcctccagctgcatccaagttgctggaaatgacattatttcattccttctaatggctgaataggattccatggtatatagacaccacgttttcctt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=92713.000000 s hg38.chr19_GL949748v2_alt 899118 1031 + 1064304 atccactgtagggaccagccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagacaagagaaaaggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggc--agagagggagaggagacagagagaaagacagcttacgccattatttctgcatatcagggactattagtactttccctaatttactactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagacccc-cccccccacccgctgcccctttcccggtctgctaagtagcgggtgttgttaattgacaccttttgctaccgctggaccatgatccgcttggtgacgggtgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccctgtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagtaattgctaccggctaatgattaatgatactcatatataatcatatctaagatctatatctggtataacaattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtgccttgccgcccaca s panTro4.chr19 59839380 1025 + 63644993 atccactgtagggaccagccccacagggttggtaggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagacaagagaaaaggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccattgataggtaa---------ggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagagagagaggagacagagagagagacagcttacgccattatttctgcatatcagggactattagtactttcactaatttaccactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcaggtctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaacctcccccggggaaagggagaccccacccacccacccaccgcccctttcccggtctgctaagtagcgggtgttgttaattgacaccttttgctaccactggaccatgatccgcttggtgacgggtgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccgtgtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagtaattgctaccaactaatgattaatgatactcatatataatcacatctaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggcacctgggtggcttgccgcccaca i panTro4.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103288989 0 - 106955855 C e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=32747.000000 s hg38.chr19_GL949748v2_alt 900149 61 + 1064304 atccactcattattcaatgggcacttcggttggttccacatctttgcaattgtgaatGGCT s panTro4.chr19 59840405 61 + 63644993 atccactcattattcaatgggcacttcggttggttccacatctttgcaattgtgaatGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751197 61 + 60714840 atccactcattagtcaatgggcactttggttggttccacatctttgcaactgtgaatGGCT i ponAbe2.chr19 I 2137 C 0 s nomLeu3.chr10 103288989 61 - 106955855 atccactcattagtcaatgggcacttcggttggttccacatctttgcaattgtgaatGACT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=652268.000000 s hg38.chr19_GL949748v2_alt 900210 293 + 1064304 GAGCcagccattcttaactgggggtgattttgtccccatgggggtatctggccacatcccgagagg-ttttttggttgtcacgagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggtgctgctatacatcacgtgatacacaggacagtccttgc-----------tacggactgaattggtcccaccaaacgtcatgtacaagcccta-ccccagatgtgactctatttggacacagggcttttcagaggtaattaagGCTGGTCAGGCGCC-------------GTAATCACAGCACTTTAGGAGTTC s panTro4.chr19 59840466 293 + 63644993 GAGCcagccattcttaactgggggtgattttgtccccatgggggtatctggccacatcccgagagg-ttttttggttgtcacgagttgcagtggggg------cagcctcagactcat-------------ccaagtccaggggtgctgctatacatcacgtgatacacaggacagtccTtgc-----------tacggactgaattggtcccaccaaacgtcatgtacaagcccta-ccccagatgtgactctatgtggacacagggcttttcagaggtaattaagGCTGGTCAGGCGCC-------------GTAATCACAGCACTTTAGGAGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751258 303 + 60714840 GAGCcagccattgttaactgggggtgattttgtccccatggggacatctggccacatcccgaga-g-ctttttggttgtcacgagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggcgctgctatacatcacgtgatacacaggacagtcctcactacagaCTGAAtacggactgaattggtcccaccaaacttcacgtacaagcccta-ccccagatgtgactctatttggacacagggcttttcagaggtaattaagGCTGGCCAGGTGCC-------------GTAATCACGGCACTTTAGGAGTTC i ponAbe2.chr19 C 0 I 275 s nomLeu3.chr10 103289050 294 - 106955855 GAGCcagccattcttaactgggggtgattttgtccccatgggggcatctggccgcatcccgagaggtttttttggttgtcaggagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggtgctgctatacatcatgtgataca-aggacagtccTtgc-----------tacggactgaattggtcccaccaaacttcacgtacaagccctagccccagatgtcactatatttggccacagcgcttttcagaggtaattaagGCTGGCCAGGCGCG-------------GTAATCACAGCACTTTAGGAGTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577000 325 + 64156825 GAGCcagccattcttaacttggggtgattttgtccccatggggacatctggccatatcccgaga-g-cttttcggttgtcatgagttgcagtgggggcaggttcaggctcaggctcatggtgtctcctgggcaaagtccaggtgtgctgctatgcatcatgtggcacacagcacagtccTtgt-----------cacggtctgaattggtcctgccaaacttcacgtaaaagccctagccccaggtgtgactctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i rheMac3.chr19 I 548 C 0 s macFas5.chr19 55703290 325 + 59248254 GAGCcagccattcttaacttggggtgattttgtccccatggggacatctggccatatcccgaga-g-cttttcggttgtcatgagttgcagtgggggcaggttcaggctcaggctcatggtgtctcctgggcaaagtccaggtgtgctgctatgcatcatgtggcacacagcacagtccTtgt-----------cacggtctgaattggtcccgccaaacttcacgtacaagccctagccccaggtgtgactctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47815908 325 + 51301725 gagcCAGCCATTCTTAACTTGGGGTGATTTTGTCCCCATGGGGACATCTGGCCACATCCCGAGA-G-CTTTTCGGTTGTCACGAGTTGCAGTGGGGGCAGGTTCAGGCTCAGGCTCATGGTGTCTCCTGGGCAAAGTCCAGGTGTGCTGCTATGCATCATGTGGCACACAGGACAGTCCTTGT-----------CACGGTCTGAATTGGTCCCGCCAAACTTCACGTACAAGCCCTAGCCCCAGGCGTGATTCTATTTGGACACAGGGCTTTTCAGAGGTAATTAATgctggccaggcaccgtggctcacgcctgtaatcacagcactttaggagttc i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 47532146 317 + 50890351 GAGCcagccattcttaacttggggtgattttatccccatggggacatctggccacatcccaaga-g-cttttcagttgtcacgagttgcagtggggg------caggctcaggctcacggtgtctgctgggcaaagtccaggtgtgctgctctgcaccatgtggcacacaggacagtccTtgt-----------cacggtctcaattggtcccgccaaacttcacgtacaagccctagccccaggtgtga--ctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i chlSab2.chr6 I 518 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=401729.000000 s hg38.chr19_GL949748v2_alt 900503 175 + 1064304 TGTGTTTATTACTGGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaagcgaaggcaaggggataactggaggccagcagttcaagacaagcctggtcaatacagcaagactccatctctat--aaaatattttaaaattagccaagcatgtt s panTro4.chr19 59840759 170 + 63644993 TGTGTTTATTACTCGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggcgaaggcaaggggataactggaggccagcagttcaagacaagcctggtcaatacagcaagactccatctct-------atattttaaaattagccaagcatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751836 175 + 60714840 TGTGTTTATTACTCATAAGTGGGTAACagcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggctaaggcaaggggataactggaggccagcagttcaagaccagcctggtcaatacagcaagactccatctctat--aaaatattttaaaattagccaagcatgtt i ponAbe2.chr19 I 275 C 0 s nomLeu3.chr10 103289344 174 - 106955855 TGTGTTTATTA-TCGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggctaaggcaaggggataactggagaccagcagttcaagaccagctgggtcaatacagcgagactccatctctat--aaaatattttggaatgagccaagcatgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577325 175 + 64156825 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcacttcgggaggctgaggcaaggggataacttgaggtcaggagttcaagaccagcctggtcaatacagcaagaccccatctctat--aaaacattttaaagttagccaggcatgtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55703615 175 + 59248254 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcacttcgggaggctgaggcaaggggataacttgaggtcaggagttcaagaccagcctggtcaatacagcaagaccccatctctat--aaaacattttaaagttagccaggcatgtt i macFas5.chr19 C 0 I 157 s papAnu2.chr19 47816233 175 + 51301725 TGTGTTTATTACTTATAAGTGGGTAAGAGCCCAGGGTGGcagctcacacgtgtaatcccagcactttgggaggctgaggcaaggggataacttgagatcaggagttcaagaccagcctggtcaatacagcaagaccccatctctgt--aaaacattttaaagttagccaggcatgtt i papAnu2.chr19 C 0 I 157 s chlSab2.chr6 47532463 177 + 50890351 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcactttgggaggctgaggcaaggggataacttgagatcaggagttcaagaccagcctggtcaatacagcaaagccccatctctattataaacattttaaagttagccaggcatgtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=311275.000000 s hg38.chr19_GL949748v2_alt 900678 233 + 1064304 tggcatgcacctgtaatcccagc-------tcaggaggctcaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcgcaccattgcactccaacccggctgtgggcaacacagcACCACCACCATCTTggctgggcacggtggctcacgcctgtcatgccagcactttgggaggccgaggcggg-tggctcacctgaggtcaggagtttgagactagcctggccaacatgg s panTro4.chr19 59840929 233 + 63644993 tggcatgcacctgtaatcccagc-------tcaggaggctcaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcgcaccattgcactccgacccggCTGTGAGGAACACAGCACCACCACCATCTTggctgggcacagtggctcatgcctgtcatgccagcactttgggaggccgaggcggg-tggctcacctgaggtcaggagtttgagactagcctggccaacatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752011 234 + 60714840 tggcatgcacctgtaatcccagc-------tcaggaggcttaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcataccattgcactccagcccagctgtgagcaacagagcACCACCACCATCTTggctgggcgtggtggctcacgcctgtcatcccagcactttggaaggccgaggcgggatgggtcacctgaggtcaggagtttgagactagcctggccaacatgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289518 207 - 106955855 tggcatgcacctgtaatcccagc-------tcagggggctcagctgggaggcctccttga--------gtttaaggctgcagggagctaagatcgcaccatcgcactccaacccggctgtgagcaacagagcACCACCACCATCTTGGCTGGGCGTAGTGGCTCA--------------------------Accaaggcggg-tgggtcacctgaggtcagaagtttgagactagcctggccaacatgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577500 247 + 64156825 tggcacgcacctgtaatcccagctacttactcaggaggctcaggtgggaggatcgcttga-cccgggagttcaaggctgccatgagctaagattgcaccattgcactccaacctggctgtgagcaacagagcaacaccactatctTgactgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcagg-tgggtcacctgaggtcaggagtttgagaccaacctggccaacatgg i rheMac3.chr19 C 0 I 126 s macFas5.chr19 55703947 216 + 59248254 tggctcacgcctgtaatcccaac-act---ttgggaggccgaggcaggtgggtcacctgaggtcaggagtttgagaccaacctg-gccaacatgg------tgaaaccccatct--ctactaaaaacataaaaa----------ttaactgggggtggtagcaggcacacgtaatccca--gatacgggaggctgaggcatg-agaatcacttgaacctgggagatggaggttacagtgagc------- i macFas5.chr19 I 157 C 0 s papAnu2.chr19 47816565 216 + 51301725 tggctcacgcctgtaatcccaac-act---ttgggaggccgaggcaggtgggtcacctgaggtcaggagtttgagaccaacctg-gccaacatgg------tgaaaccccatct--ctactaaaaacataaaaa----------ttaactgggggtGGTAGCAGGCACACGTAATCCCA--gatacgggaggctgaggcatg-agaatcgcttgaacttgggagatggaggttacagtgagc------- i papAnu2.chr19 I 157 C 0 s chlSab2.chr6 47532640 247 + 50890351 tggcacgcacctgtaatcccagctacttactcaggagtctcaggtgggaggatcgcttga-cccgggagttcaaggctgccatgagctaagattgcaccattgcactccaacctggctgtgagcaacagagcaacaccactatctTgactgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcagg-tgggtcacctgaggtcaggagtttgagaccaacctggccaacatgg i chlSab2.chr6 C 0 I 128 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=194977.000000 s hg38.chr19_GL949748v2_alt 900911 105 + 1064304 tgaaatcacgccactgcactccagcctaggcaaccaagtgagactctgtcCGCCCCACCACCCCACCAAA--AA---AAAGACTACTATCTTAAACAAAATCAAAATTTT s panTro4.chr19 59841162 102 + 63644993 tgaaatcacgccactgcactccagcctaggcaaccaagtgagactctgtcCGCCCCACCACCCCACCAAA--AA---AAAA---ACTATCTTAAACAAAATCAACATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752245 107 + 60714840 tgaaatcAcaccactgcactccagtctaggcaaccgagtcagactctgtcCACCCCACCACCCCACCAAAACAA---AAAAACTACCATCTTAAACAAAATGAAAATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289725 105 - 106955855 tgaaatcacgccactgcactccagcctaggcaaccgagtgagactctgtccaccccaccaaaaaaaaaaa--aa---aaaaaCTACCTTCTTAAACAAAATCAAAATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577873 107 + 64156825 tgagatcacgccattgcactccagcctgggcagccgagtgagaccctgtcCACCCCACCACCCCACCAAA--AAAATAAAACCTACCATCttaaataaaatcaaaa-ttt i rheMac3.chr19 I 126 C 0 s macFas5.chr19 55704163 94 + 59248254 tgagatcacgccattgcactccagcctg-------------gacCCTGTCCACCCCACCACCCCACCAAA--AAAATAAAACCTACGATCTTAAATAAAATCAAAA-TTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47816781 103 + 51301725 tgagatcacgccattgcactccagcctgggcagccgagtgagaccctgtccaccccaccaccccaccaaa--aaaataaaacctaccatct----taaaatcaaaa-ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533015 105 + 50890351 tgagatcacaccattgcactccagcctgggcaactgagtgagaccctgtcCACCCCACCACCCCACCAAA--AAA--AAAACCTACTATCTTAAATAAAATCAAAA-TTT i chlSab2.chr6 I 128 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=1033785.000000 s hg38.chr19_GL949748v2_alt 901016 457 + 1064304 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACGGGAACTTCATGTGCATGTAGAACCCTAAATGTTGACTCAGCCCTACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCTACCACCCTTCCCATCGG----------TGTGAGCTGTATCCCGCT-AAACACTGTTACCACCCACAGCC----TGCATTACTACCAGCTGACTGTAGCCTTAAACACCACAGTGATCTCGAGCATTTGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGTTTGGGTTAGTAAAAAGAACTTTGT s panTro4.chr19 59841264 454 + 63644993 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCTGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACGGGAACTTCATGTGCATGTAGAACCCTAAATGTTGACTCAGCCCTACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATCGG----------TGTGAGCTGTATCCCGCT-AAACACTGTT---ACCCACAGCC----TGCATTACTACCAGCTGACTGTAGCCCTAAACACCACAGTGATCTCGAGCATTTGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGTTTGGGTTAGTAAAAAGAACTTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752352 455 + 60714840 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCGACCCAGATATTTTCACTCCCAGTCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAACTCTACACAGGAACTTCATGCGCATGTAGAACCCTAAATGTTGACTCGGCCCCACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATTGG----------TGTGAGCTGTATCCCACTAAAACACTGTT---ACCCACAGCC----TGCATTACTAGCTGCTGACTGCGGCCCTAAACACCATGGTGATCTCGAGCATTTGAGAAGGCTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGTATCATTCAGTG-----CTGAAGCCACTCAATCTCCAGGTTCGGGTTAGTAAAAAGAACTTTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289830 454 - 106955855 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCAACCTAGACGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACTTCATGCCCATGCAGAACCCTACATGTTGACTCAGCCCCACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATTGA----------TGTGAGCTGTATCCCACT-CAACACTGTT---ACCCACAGCC----TGCGTTACCACCAGCTGACTGTAGCCCTAAACAGCACGGCGACCTCGAGCATTGGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAACGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CCAAAGCCACTCAACCTTCAGGTTTGCGTTAGTAAGAAGAACTTTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577980 445 + 64156825 taagtaaataaaatatttaGGGGAAAAAAAACTTC------AAATATGCAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCACGCCCATGTAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGCCTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCGAAGTC----TGCATCACTACCAGCTGACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTG---AGATTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGACGCCACTCAACCTCCAGGCTTGGGTTAGT---AAGAACTTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55704257 448 + 59248254 TAAGTAGATAAAATATTTAGGGGAAAAAAAACTTC------AAATATGCAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCATGCCCATGTAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGACTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----TGCATCACTACCAGCTAACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTGAGAAGATTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGACGCCACTCAACCTCCAGGCTTGGGTTAGT---AAGAACTTTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47816884 447 + 51301725 taagtagataaaatatttagggg-aaaaaaacttc------aaatatgcAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTAtctttgtgtctttatttttagcAAATTCTACACAGGAACCTCATGCCCACATAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGCCTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----TGCATCACTACCAGTTGACTGTAGCCCTAAACACCATGGCGATCTCCAGCGTTTGAGAAGATTTATCTTGACAAGAGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTACCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGCTTGGGTTAGCAAAAAGAActt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533120 447 + 50890351 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTC-------AATATGCAGC----AATCTGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTATGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCATGCCCATGTAGAACTGTAAATGTTGACTCAGCCCCACCTGTCATGACCGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----GGCATCACTACCAGCTGACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTGAGAAGATCTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGCTTGGGTTAGTAAAAAGAACC--GT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20002225 441 - 122678785 taaataaataaaaattaaaaaaa-taaaaaaaataaaTACCCAATAATCAACATAGATTCTGACCCAGACGTTCTCAATCATA------ACCCACCATCACTATATTTGTATCTTAAAAAAA------AAAAAAGCTTTGTATTCACGTGGAGAC-----------CTCAGCCTCACCTCCAATATCTTGATCACTTCCTCTAAACCATACTCAATTCCTCCACCACGCATCTCCCTGAAATCCTCCCCTGT---CCACACCCTGGT-AAACCCAGTC---ATCTGAAAGCCTAGTAAGCTGATATCCACTGAGTGGAACACCAAATACTACAGCAGCTATGAGGGCTTGAGCACATTTATCCTGATAAGAG------------GGCAACACCAAATGGTGGAAGAAACCCGGTCCTTCCTGGAACAACCCAGTGGCTAAGTTAAGCCACAGGGTTCCCATCCTTGAG---GTAAGAAGACCCCTAT i canFam3.chr1 I 8686 I 5603 e calJac3.chr22 45879672 8977 + 49145316 I a score=516917.000000 s hg38.chr19_GL949748v2_alt 901473 233 + 1064304 CAggccaggcacagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctttactaaaaatac--aaaaattagccaggcatggtgacgcacacctctagtctcagctactccggaggctgggacagaagactcacttgaacccaggaggcagaggttgtagtgagcc s panTro4.chr19 59841718 232 + 63644993 CAggccaggcacagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaaaaccagcctggctaacatggtgaaacctcgtctttactaaaaatac--aaaaattagccaggcatggtgacgcacacctctagtctcagctactccagaggctgggacagaagactcac-tgaacccaggaggcagaggttgtagtgagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752807 233 + 60714840 CAggccaggcgcagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctctactaaaaatac--aaaaattagccaggcatggtggtgcacacctctagtcccagctgctcaagaggctgggacagaagactcacttgaacccaagaggtggaggttgcagtgagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290284 233 - 106955855 CAggccaggcgcagtggctcatgcctgtcatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctctactaaaaatac--aaaaactagccaggcatggtgacgcacacctctagtcccagctactcgagaggctgggacagaagactcacttgaagccaggaggtggaggttgcagtgagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578425 234 + 64156825 CAGCccaggcacagtggctcacggctgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacacggggaaaccctgtctctattaaaaatacaaaaaaatcagccaggcgtggtggtgtacacctctagtcccagctactcaggaggctggggcagaagactcacttgaacccagcaggtggaggttgcagtgag-c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55704705 234 + 59248254 CAGCccaggcacagtggctcacggctgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacacggggaaaccctgtctctactaaaaatac-aaaaaatcagccaggcgtggtggtgtacacctctagtcccagctactcaggaggctgggacagaagactcacttgaacccaggaggtggaggttgcagtgagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817331 201 + 51301725 -------------------------tgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacatggggaaaccctgtctctactaaaaatac-aaaaaatcagccaggcgtggtggcgtacacctctagtcccagctactcaggaggctgggacagaagACTCACttgca--------gtggaggttgcagtgagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533567 234 + 50890351 CAGCccagacacagtggctcacggctgtcgtcccagcactttgggaggccaaggcaggcaggtcacctgaggtcagcagttcaaaaccagcctggttgacacggggaaaccctgtctctactaaaaatac-aaaaaattagccaggcatggtggcatacacctctagtcccagctactcaggaggctgggacagaagactcacttgaacccaggaggtggaggttgcagtgagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=77741.000000 s hg38.chr19_GL949748v2_alt 901706 26 + 1064304 aagatcgcaccactgcactccagcct s panTro4.chr19 59841950 26 + 63644993 gagatcgcaccactgcactccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753040 26 + 60714840 aagatcgcaccactgcactccagcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290517 26 - 106955855 aagatcgcaccactgcactccagact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578659 26 + 64156825 aagatcacaccactgcgctccagcct i rheMac3.chr19 C 0 I 28 s macFas5.chr19 55704939 26 + 59248254 aagatcacaccactgcgctccagcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817532 26 + 51301725 gagatcacaccactgcgctccagcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533801 26 + 50890351 aagatcacaccactgcgctccagcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888649 26 + 49145316 Aagatgatgccactgcgctccagcct i calJac3.chr22 I 8977 C 0 e canFam3.chr1 20002666 5603 - 122678785 I a score=20425.000000 s hg38.chr19_GL949748v2_alt 901732 71 + 1064304 gggcgaca--gaggcaagact-ccatctcaaaaaaaaaaaaaaaaaaaaaaagaaaagaAAACTTTGTCATACA s panTro4.chr19 59841976 61 + 63644993 gggcgaca--gaggcaagact-ccatctcaaaaaaaaaaaaaaaagaa----------aaaaCTTTGTCATACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753066 57 + 60714840 gggcaaca--gaggggagact-ccatctcaagaaaaaaaaaaag--------------aaaaCTTTGTCATACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290543 68 - 106955855 gggcgaca--gaggcaagact-caatctcaaaaaaaaaaaaaaaaaaaaaaaagg---aaaaCTTTGTCATACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55704965 29 + 59248254 aggaaacagcgagaTAAAACTGTCATCTT--------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817558 29 + 51301725 aggaaacagtgAGTCAAAACTGTCATCTT--------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533827 29 + 50890351 aggaaacagcgagacAAAACTGTCATCTT--------------------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888675 47 + 49145316 gggcgaca-------aagact-ccatctcaaaaaacaaaaacaaa-------------------CTGTCATATA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e rheMac3.chr19 60578685 28 + 64156825 I a score=206857.000000 s hg38.chr19_GL949748v2_alt 901803 72 + 1064304 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC s panTro4.chr19 59842037 72 + 63644993 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753123 71 + 60714840 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTG-TTTTGTGCCTGGGACCATGACAAATTTCCCCTTATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290611 72 - 106955855 AGCTTTCAACCTACAGCATTAGCCATATGCCCATGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578713 72 + 64156825 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTATGCCTGGAACCGTGACAACTTCCTCCATATC i rheMac3.chr19 I 28 I 304 s macFas5.chr19 55704994 72 + 59248254 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTGTGCCTGGAACCGTGACAACTTCCCCCATATC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47817587 71 + 51301725 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTG-TTTTGTGCCTGGGACCATGATAACTTCCcatatatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533856 72 + 50890351 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTGTGCCTGGAACCATGGCAACTTCCCCCATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888722 72 + 49145316 AGCTTTCAACCTAAAGCCTCGGCTATATGCCCTCGTTTCTGTGCCTGGGACCATGGCAACCTCCCCCGTATC i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I a score=2497.000000 s hg38.chr19_GL949748v2_alt 901875 10 + 1064304 AATGCtctta s panTro4.chr19 59842109 10 + 63644993 AATGCtctta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753194 10 + 60714840 AATGCTCtta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290683 10 - 106955855 AATGCTCGTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705067 6 + 59248254 ----tttttt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47817658 5 + 51301725 -----aattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533928 2 + 50890351 --------CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888794 10 + 49145316 CATGTTCTTA i calJac3.chr22 C 0 I 142 e canFam3.chr1 20002666 5603 - 122678785 I e rheMac3.chr19 60578785 304 + 64156825 I a score=291844.000000 s hg38.chr19_GL949748v2_alt 901885 185 + 1064304 ----ttttttttttttcgagacaag-agttttgctcttattgcccaggctggagtgcagtggcacaatctcagctcaccgcaaactccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatacaccaccccaccc----------ggctaattttgtatttttagtagagac s panTro4.chr19 59842119 189 + 63644993 ttttttttttttttttcgagacaag-agttttgctcttattgcccaggctggagtgcagtggcacaatctcagctcaccgcaaactccgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatacaccaccacaccc----------ggctaattttgtatttttagtagagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753204 182 + 60714840 ------tttttttttttgagac-ag-agttttgcttgtattgcccaggctggagtgcagtggcacgatctcagcttaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctaggattacaggcatgcaccaccacaccc----------ggctaattttgtatttttagtagagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290693 191 - 106955855 -------ttttttttttgagac-ag-agttttgctcttattgcccaggcaggagtgcagtgacgcgatctcggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcatgcaccaccacgcccggctaattttggctaattttgtatttttagtagagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705073 188 + 59248254 tttttttttttttttttgagac-ag-agttttgctcttgttgcccaggctggagtgcaatgatgtgatctcagctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctctcaagtacctgggattacaggcatgcaccaccacgccc----------agctaattttgtattgttagtagagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817663 188 + 51301725 ttatttattttttttttgagac-gg-agttttgctcttgttgcccaggctggagtgcaatggtgtgatcttggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctctcgagtacctcggattaccggcatgcaccaccacatcc----------agctaattttgtattgttagtagagac i papAnu2.chr19 C 0 I 2924 s chlSab2.chr6 47533930 178 + 50890351 Attttttttttttttttgagac-agtagttttgctcttgttgcccaggctagagtgcaatggtgtgatctcagctcaccacaacctccacctcccg---------gattctcctgcctcagc--ctcgagtacctgggattacaggcatgcaccaccacgccc----------agctaattttgtattgttagtagagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e rheMac3.chr19 60578785 304 + 64156825 I a score=27768.000000 s hg38.chr19_GL949748v2_alt 902070 23 + 1064304 ggggtttctccatgttgaggctg s panTro4.chr19 59842308 23 + 63644993 ggggtttctccatgttgaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753386 23 + 60714840 ggggtttctccatgttgaggccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290884 23 - 106955855 ggggtttccccatgttgAAGCTG i nomLeu3.chr10 C 0 M 471 s macFas5.chr19 55705261 22 + 59248254 -gggtttcttcatgttcaggctg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534108 23 + 50890351 ggggtttcttcatgttcaggctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=57863.000000 s hg38.chr19_GL949748v2_alt 902093 84 + 1064304 gtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagcgcctggc s panTro4.chr19 59842331 84 + 63644993 gtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagcgcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753409 84 + 60714840 gtctcgaactcctgacctcaagtgatccgcccacctcagcctccctaactgctgggattacaggcatgagccaccgcgcccggc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55705283 61 + 59248254 gtctcgaactcccgacctcaggtgatccacccgcctcggcctgccaaagtgctggaatcac----------------------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534131 84 + 50890351 gtctcgaactcccaacctcaggtgatccacccgcctcggcctgccaaagtgctgggatcacaggcgtgagccaccgcgcccggc i chlSab2.chr6 C 0 I 1 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e nomLeu3.chr10 103290907 471 - 106955855 M e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=1325.000000 s hg38.chr19_GL949748v2_alt 902177 10 + 1064304 TGCTCTTA---TT s panTro4.chr19 59842415 10 + 63644993 TGCTCTTA---TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753493 13 + 60714840 cACTCTTATTCTT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e nomLeu3.chr10 103290907 471 - 106955855 M e chlSab2.chr6 47534215 1 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e macFas5.chr19 55705344 0 + 59248254 C e rheMac3.chr19 60578785 304 + 64156825 I a score=26130.000000 s hg38.chr19_GL949748v2_alt 902187 97 + 1064304 AAAATAGTCTCATCACCTACCGCAAGCGTG-GAGAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTGGCAGCGCCTGGAAGCCAGTGCTAACATCATGG s panTro4.chr19 59842425 97 + 63644993 AAAATAGTCTCATCACCTACCGCAAGTGTG-GAGAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTGGCAGCACCTGGAAGCCAGTGCTAACATCATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753506 96 + 60714840 CAAATAGTCTCATCACCTGCCGCGAGTTTG-GAAAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTAG-GGGACCTGGAAGCCAGTGCTAACATCATGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55705344 24 + 59248254 -----------------------aagcgtg----agcca----------------------------ccgcgcccg---gcc---------------- i macFas5.chr19 C 0 C 0 s calJac3.chr22 45888946 96 + 49145316 aaaataattTCACC-CCTACCAAAAGTCTGCTGGAGTCAAGTGAGGAGAGGGATCCATCACTTTGGTCAGCACCTGGAAGCCAGTGCTAACGCAAAG- i calJac3.chr22 I 142 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e nomLeu3.chr10 103290907 471 - 106955855 M e chlSab2.chr6 47534215 1 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=55779.000000 s hg38.chr19_GL949748v2_alt 902284 33 + 1064304 TGACAACTT---TTCATTCTTAAGGAAAATTGCGGA s panTro4.chr19 59842522 33 + 63644993 TGACAACTT---TTCATTCTTAAGGAAAATTGCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753602 33 + 60714840 CGACAACTT---TTCATTCTTAAGGAAAATTGCGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60579089 33 + 64156825 TGACAACTT---GTCATTCTTAAGGAAAATTGTGGA i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55705368 33 + 59248254 TGACAACTT---GTCATTCTTAAGGAAAATTGTGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534216 33 + 50890351 TGACAACTT---TTCATTCTTAAGGAAAATTGTGGA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45889042 36 + 49145316 TGACAACTTTTCTTCGTTCTTAAGGAAAATTGCAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e nomLeu3.chr10 103290907 471 - 106955855 M e papAnu2.chr19 47817851 2924 + 51301725 I a score=534078.000000 s hg38.chr19_GL949748v2_alt 902317 281 + 1064304 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCCGAGAGAAACGGGGAGGCGAGAGAGACAGAGACATACACAGAGACTCCCAGAGACAGCCACAC------AGACTCACACAGAAAC---------------------AGACAGACAggctgggctcggtggctcacgcctgtaatcccaccactctgggaggctgaggcgggtagatcacctgaggtcaggagtccgagaacagcctggccaacattgtgaaaccccgtctct s panTro4.chr19 59842555 281 + 63644993 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCCGAGAGAACCGGGGAagcgagagagacagagacatacacagagactcccagagacagccacac------agactcacacagaaac---------------------agaCAGACAggctgggcgcagtggctcacgcctgtaatcccaccactctgggaggctgaggcgggtggatcacctgaggtcaggagtccgacaacagcctggccaacattgtgaaaccccgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753635 275 + 60714840 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATAACCAAATACACGGTGTGGAAAAGCTGTGTTTGCCGTGGCAATGGGAAGCAGAGAGAACCAGGGAGGTG--------AGAGACATACACAGAGACTCCCAGAGACAGCCACGC------AGACTCACacagaaac-------------------agagacagacgggctgggcccggtggctcacgcctgtaatcccaccactctgggaggccgaggcgggtggatcacctggggtcaggagttcgagaacagcctggccaacattgtgaaaccccgtctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291378 278 - 106955855 ----------------------------------------------------------------------------------------GTGACTTCTATGCGTTTTCTATG-ATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCAGAGAGAACCGGGGAGGGG--agagacagagacatacacagagactcccagagacagcca--c------agactcacacagaaac-------------------agagatagacaggctgggcgcggtggctcacgcctgtaatcccaccactttgggaggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcctggccaacgttgtgaaaccctgtctct i nomLeu3.chr10 M 471 C 0 s rheMac3.chr19 60579122 275 + 64156825 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGC--AGAGAACCGGGGAGGCG--agagacagagacat--acagagactcccagagacagccacac------agactcacacagaaac---------------------agacacaCAggctgggtgcagcgactcacacctgtgatcccagcactccgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaacagcctgcccaacgttgtgaaaccccatctct i rheMac3.chr19 C 0 I 420 s macFas5.chr19 55705401 271 + 59248254 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGC--AGAGAACCGGGGAGGCg--agagacagagacat--acagagactcccagagacagccacac------agactcacacagaaac---------------------agacacacaggctgggtgcagcgactcacacctgtgatcccagcgctctgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaacagcctgcccaacgttgtgaaaccctct---- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534249 268 + 50890351 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAACGACCAAATACAGGGTGTGGAAAAGCTATGTTTGCCATGGCAATGGGAAGCAGAGAGAACTGGGGAGGCG--AGAGACAGAGACATACACAGAGACTCCCAGAGACAGCCACAC------AGACTCACACAGAAAC---------------------AG----ACAggctgggcgcggcgactcacacctgtaatcccagcgctctgggaggccgaggcgggtggatcacctgaggtcaggagtctgagaacagcctgcccaac---gtgaaaccctct---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889078 380 + 49145316 GTGGCTTTTTgttccctgactgggaattgaacctgggccgcagcagtgagagcactgcatcgtaaccactagaccaccagggaGCAGAGTGGCTTCTATGCATTTTCTATGAATGACCAAATACAG---GTGTAAAAGCTGTGTTTCCCAGGGCAATGGGAAGTAAAGAGAAGGCGGCAGGCG--------AGAGACAT--ACACAGACTCCcagagacagccacacagagatagagacacacggagacagagacacaacagagagacagagacagaCA-gccaggtccagtggctcacatctgtaatcccagcactttgggaggccgagacaggtgaatcac--aaggtcaagagatcgagaccatcctggtcagcatggtgaaaccccatctct i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e papAnu2.chr19 47817851 2924 + 51301725 I a score=45664.000000 s hg38.chr19_GL949748v2_alt 902598 32 + 1064304 agtaagaatac-aaaaaattagccaggcatggt s panTro4.chr19 59842836 32 + 63644993 agtaagaatac-aaaaaattagccaggcatggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753910 32 + 60714840 agtaagaacac-aaaaagttagctgggcatggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291656 33 - 106955855 agtaagaatacaaaaaaattagccaggcatggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705672 32 + 59248254 agaaagagtac-aaaaaattagccgggcatggt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534517 32 + 50890351 agaaagaatac-aaaaaattagcccggcatggt i chlSab2.chr6 C 0 I 225 s calJac3.chr22 45889458 31 + 49145316 actaaaaatac--aaaaattagctggctatggt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=140751.000000 s hg38.chr19_GL949748v2_alt 902630 151 + 1064304 ggcacagggctgtaattccggctactcggaaggctgaggcaggagaatcacttgaacctgggaggcgc-ggttgcagtgagctgagatcacgccattgcactccag---------catgggcgacaagagtgaaactccgtctcaaaaaaaa-aaacaaaaa s panTro4.chr19 59842868 145 + 63644993 ggcacagggctgtaattccagctactcggaaggctgaggcaggagaatcacttgaacctgggaggcgcaggttgcagtgagctgagatcacaccattgcactccag---------catgggcgacaagagtgaaactctgtctcaaaaa--------aaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753942 148 + 60714840 ggcacacgactgtaattccggctactcggaaggctgaggcaggagaatctcttgaacctggtaggcggaggttgcagtgagccgagatcacaccattgcgctccag---------catgggcgacaagagtgaaacgccgtctcaaaaaaaa-----aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291689 154 - 106955855 ggcatacgactgtaattccggctactcggaaggctgaggcagaagaatctcttgaacctggtaggcggaggttgcagtgagccaagatcatgctattgcactccagcatgggcgacatgggcgacaagagtgaaactccatctcaaaaa--------aaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705704 144 + 59248254 ggcacatgcctgtaattccagctactcgggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagccgagatcacgccattgcactccag---------cctggggaac-agagagaaactccgtctcaaaaa--------aaaga i macFas5.chr19 C 0 C 0 s calJac3.chr22 45889489 150 + 49145316 ggtgtacgcctgtagtcccagctactcgggaggctgaggcaggacgatgacttgaacccgaaaggcagaggttgcagcgaac-actcctacgccactgcactccc----------cactggtgac-agagcgagactccatttcaaaaaagaaaaacaaaaa i calJac3.chr22 C 0 I 3 e canFam3.chr1 20002666 5603 - 122678785 I e chlSab2.chr6 47534549 225 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=5022.000000 s hg38.chr19_GL949748v2_alt 902781 15 + 1064304 aaaaaaacgaaaGAA---- s panTro4.chr19 59843013 15 + 63644993 gaaaaagagaaagaa---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754090 15 + 60714840 gaaagaacagagaga---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291843 15 - 106955855 aaaaaaaaaaaagaa---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705848 19 + 59248254 aaaaaaagaaagagacagc i macFas5.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I e chlSab2.chr6 47534549 225 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=81774.000000 s hg38.chr19_GL949748v2_alt 902796 155 + 1064304 CAGAGAGA--------------CACATACAAAGACAGAGAT------AGAAACGCCCAGCGacag------agacacacacagagaaacacagacagacacagagacacacacacagaaacagacacagagacagagagacaaaaagacagacacagagaaacaa--agagagacacacagag--- s panTro4.chr19 59843028 131 + 63644993 CAGagaga--------------cacatacaaagacagagat------agaaacgcccagcgacag------agagacacac------------------------acacagaaacagacacagagacagagaaagagagacaaaaagacagacacagagaaacaa--agagagacacacagag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754105 135 + 60714840 cagagaga--------------cacatacaaagacagagatacagagaaaaacgcccagagacag------agagacacac------------------------agagaaacacagagaaagagacagacacagagagacacac--acagaaagagacaaaaag--acagagacacagagaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291858 124 - 106955855 cagagagacagagacaaagagtcacatacaaagacagagatacgga-gaaaacacccagagacag------agagacac--------------------------acagagaaacagacacagcgatag--------------------agacacagagaaacaa--agagagac----agag--- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705867 133 + 59248254 cagagaga--------------cacatacagagacagagatac----agaaacgcccagagacagacgcacagagacacac------------------------aaagagac--agacacacacacagaaacagcgatagagacacagagagagagacaa------aaagagatacagagaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820775 144 + 51301725 cagagaga--------------cacatacagagacagagatac----agaaagacccagagacagacacacagagacacac------------------------aaagagacagagacacacacacagaaacagtgatagagacacagagacagagaaagacagacaaagagatacagagaaaaa i papAnu2.chr19 I 2924 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I e chlSab2.chr6 47534549 225 + 50890351 I e rheMac3.chr19 60579397 420 + 64156825 I a score=6888.000000 s hg38.chr19_GL949748v2_alt 902951 26 + 1064304 acagagagagagagagacacaTACAC s panTro4.chr19 59843159 26 + 63644993 acagagacagagagagacacaTACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754240 12 + 60714840 acaaagatagag-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291982 14 - 106955855 acagagaga------------cacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579817 26 + 64156825 acagagaaacaaagagagacaCACAC i rheMac3.chr19 I 420 C 0 s macFas5.chr19 55706000 16 + 59248254 ----------acagagagacacacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820919 15 + 51301725 -----------aagagagagacacac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I e chlSab2.chr6 47534549 225 + 50890351 I a score=208243.000000 s hg38.chr19_GL949748v2_alt 902977 96 + 1064304 ACACACACAGAGAGTAGGAGGCGGCCCGTGGGAGCCGAGCAGAACCAGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAACAGTGACTGTAAGC s panTro4.chr19 59843185 95 + 63644993 ACACACACAGAGAGTAGGAGGCGGCCCGTGGGAGCCAAGCAGAACCCGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAAC-GTGACTGTAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754252 89 + 60714840 -------TAGGGAGTAGGAGCCGGCCCGTGGGAGCCAGGCAGAGCCGGCGTGAGGCACGGCCATCTTCTGAATTAAAGACTGCAGTGACTGTAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291996 96 - 106955855 acacacagggagagTAGCAGCCAGCCCGTGGGAGCCAGGCAGAGCCGGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAATAGTGACTGTAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579843 96 + 64156825 ACACACACAGAAAGTAGGAGCCGGCCCGTCGGAGCCAGGCAGAGCCAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGGAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706016 96 + 59248254 acacacaCAGAAAGTAGGAGCCGGCCCGTAGGAGCCAGGCAGAGCGAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGGAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820934 96 + 51301725 acacacacagaaagtaGGAGCCGGCCCGTAGGAGCCAGGCAGACCCAGTGTGAGGCAAGGCCATCTTCCGAATTAAAGGCAACAGTGCCTGGAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47534774 96 + 50890351 acaCACACAGAAAGTAGGAGCCGGCCCGTAGGAGCCAGGCAGAGCCAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGTAAGC i chlSab2.chr6 I 225 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I a score=715126.000000 s hg38.chr19_GL949748v2_alt 903073 325 + 1064304 TTGTGCTTTGTGAGTAACAGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGCgctgcttccatg-------------tccaaaggcacagctgagagctgatg----agagaccgcggggcccacagtgccaagcatatgaactatctggccc------------gttTGTCAATGCGTGGGTTGATCACATAAGTTATGATCACATAAGTCACAAAGA--------CACACTGATCACATAGATGC-ACCTGGCAGATAG-----TAGACCACATGGCGCCTGAGTTAGGGAAGAA--------AAGAAATAGAAGAATCAACCGAA s panTro4.chr19 59843280 324 + 63644993 TTGTGCTTTGTGAGTAACAGGATAGATTAGAACA-GGGCTGGCTGTCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGTGCTGCTTCCATG-------------TCCAAAGGCACAGCTGAGAGCTGATG----AGAGA-CGCGGGGCCCACAGTACCAAGCATATGAACTATCTGGCCC------------GTTTGTCAATGGGTGGGTTGATCACATAAGTTATGATCACATAAGTCACAAAGA--------CACACTGATCACATAGATGC-ACCTGGCAGCCAG-----TAGACCACGTGGTGCCTGAGTTAGGGAAGAA--------AAGAAATAGAAGAATCAACCGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754341 318 + 60714840 TTGTGCTTTGTGAGTAACGGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGTgctgcttccatg-------------tccaaaggcacagctgagcgctgatg----agagaccgtggggcccacagtgccaagcatattaactatctggccc------------gttTGTCAATGCATGGGT--------TAGGATATGAGCACATAAGTCACAAAGA--------CACACTGATCACACAGATGC-ACCAGACAGCTAGCAAACTAGACCAAGTGGTGTCTGAGTTAGGGAAG------------GACATAGAAGAATCAACCGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103292092 318 - 106955855 GTGTGCTTTGCAAGTAACAGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGCCCCAGCCAGACC---------------CTGCgctgcttccatg-------------tccaaaggcacagctgagagctgatg----agagaccacggggcccacagtgccacgcatattaactatctggccc------------gttTGTCAATGCATGGCT--------TAGGATATGAGCAAATAAGTCACAAAGA--------CATACTGATCACATAGATAC-ACCAGGCAGCTAGTAAACTAGACCAAGTGGTGCCCGAGTTAGGGAAG------------AAAATACAAGAATCAACGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579939 343 + 64156825 TTGT--TTCGTGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGagccaggcccttggcacggatcatctgcactgcttccgtg-------------tacaaaggcacagctgagagctgatg----agagaccacggggcccacggtgccaagcatattaactatctggccc------------gttTGTCAACACGTGGGT--------TAGGATATGATCAAATAAGTCACAAAGA--------CACACCGATCACATAGATGC-ACCAGGCAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGAGAAAAAAAAGAAATAAGAAATAGAAGAATCAACAGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706112 336 + 59248254 TTGT--TTCGTGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGagccaggcccttggcacggatcatctgcactgcttccgtg-------------tacaaaggcacagctgagagctgatg----agagaccacggggcccacggtgccaagcatattaactatctggccc------------gttTGTCAACGCGTGGGT--------TAGGATATGATCAAATAAGTCACAAAGA--------CACACCGATCACATAGATGCAACCAGACAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGGGAAGAA--------AAGAAATAGAAGAATCAACAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47821030 335 + 51301725 TTGT--TTCATGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGAGCCAGGCCTTTGGCACAGATCATCTGCACTGCTTCCGTG-------------TACAAAGGCACAGCTGAGAGCTGATG----AGAGACCACGGGGCCCACAGTGCCAAGCATATTAACTATCTGGCCC------------GTTTGTCAACGCGTGGGT--------TAGGATATGCTCAAATAAGTCACAAAGA--------CACACTGATCACATAGATGC-GCCAGGCACTTAGTAAACTAGACCAAGGCGTGCCTGagttagagaagaa--------aagaaatagaagaatcaACAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47534870 331 + 50890351 TTGT--TTCGTGGGTAACAGGATGGATGAGAACA-GGGTTGGCTGTCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCACAGGTGCGAGCCAGGCCCTTGGCACAGATCATCTGCActgcttccgtg-------------tacaaaggcacagctcagagctgatg----agagaccacggggcccacagtgccaagcatattaactatctggccc------------gttTGTCAACACGGGGGT--------TAGGATACGATCAAATAAGTCACAAAGA--------CACACCAATCACATAGATGC-ACCAGGCAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGAGAAGAA------------AATAGAAGAATCAACAGAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20008269 390 - 122678785 TTGTCCTTCATAAGTAACAGAAGAGATTAGAAcaggggttggcaaactatggcccatgggccaaagctggcctattgcctatttttataaataaagttttattggaacacagccatacc--------cattcatttgcgtattgtctatggctctttgcacactacaacagcaaagt--ggaattgtcgtaacagtgaccatacagcttacag-acctaaaatattagctatctggctctttacagaaaaagttAACTACCTTCTGGGA--------TAGAATATCCTAAAACTAGTTAAGGAGGCCACAGACCACACTGATCATGTAGACTC-ATCAGACAACTTTTAAATTTAGCCAAGTAATACCTGAGCTAGGGCAAAA----AAAAAAAAAGAAAGAAAACCAACATAA i canFam3.chr1 I 5603 C 0 e calJac3.chr22 45889639 3 + 49145316 I a score=1416875.000000 s hg38.chr19_GL949748v2_alt 903398 458 + 1064304 TCATCCCTGAACTTCTTAGCAATACTTCCTCCTAGACAAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCCTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTCTAAC--TTTATTA---------TCCCTGTGAGAAAGTACATAGCGTCATGTGAAGGGGGTGCGTGACTCGTGCAGAATCTCCCAAAAA-TAGTGAGAAAACCAGTGTCAAATCCTACCTCTCGAC--AGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACATCTTAGAG--ACCCGAATCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTGGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA s panTro4.chr19 59843604 460 + 63644993 TCATCCCTGAACTTCTTAGCAATACTTCCTCCTAGACGAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCCTGAGCATGTCAATAAACGCAGCTGCAGCGAGAGTGCTCTAAC--TTTATTA---------TCCCTGTGAGAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTCGTGCAGAATCTCCCAAAAA-CAGTGAGAAAACCAGTGTCAAATCCTACCTCTCGACATAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACATCTTAGAG--ACCCGAATCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTGGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGACTTCCAAATTAGTTTCATAGGTCTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754659 460 + 60714840 TCATCCCTGAACTTCTTAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCTTGAGCATGTCAATAAACGCAGCTGCAACGAGCGTGCTCTAAC--TTTATTA---------TCCCTTTGAGAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAGTCCTACATCTTGACACAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCCTAAGACATCTTAGAG--ACCCAATTCCCGCTTC---CTGTGTAACGCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACCGAGGTGCCATTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTCGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAACTAGTTCCATAGCTCTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103292410 457 - 106955855 TCATCCCTGAACTTCTTAGCAACACTTCCTCCTAGACTAAGCA--CAGAGTACCATATTTA-TTGCAGGTTT-CTCTTGAGCATGTCAATAAACGCAGCTGCAACGA--GTGCTCTAAC--TTTATTA---------TCCCTGTGAAAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTGGTGCAGAATCTCCCAAAAA-CAGTGAGAAAACCAGTGTCAAATCCTATATCTTGACACAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACACCTTAGAG--ACCCGATTCCCGCTTC---CTGTGTAATTCACAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGGCCCAGAAGCATTGCAATCAATAGTCAGCTTCGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAGATTAGTTTCATAGGTCTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60580282 458 + 64156825 TCATCCCTGAACTTCTCAGCGATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------TCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTGGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGCTTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706448 458 + 59248254 TCATCCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAACAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------GCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTGGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGATTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47821365 458 + 51301725 TCATCCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAATGCAGCTGCAATGAGAGTGCTC--AC--TTTATTA---------TCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGCAAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATCCACAAAATATCTTAGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCaaaaaaaGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGCTTAggattcttttctttcacttcctcCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47535201 458 + 50890351 TCGTGCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------TCCCCGTGAGAAGGTGCATAGTATGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGCGAGAAAACCAGTGTCGAATTCGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTAGGG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCACTGCAATCAATTGTCAGCTTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889642 438 + 49145316 TCATCCCTGAACTTCTTAGTAGT-----TTCCTAGACTGAGCA--CAAAGCACTGTATGTA-CTGCAGGTTTGCTCTTGGGCACGTCAATAAA--CAGCTCCAACGAGAATGCTCCAACTTTTTATTA---------TCCCGGTGAGAAAGTGCACAGCATGAAGTGAAGGGCGTGCGTGGCTTCTGCAGAATCTCCCACGAA-CAGCGAGAAAAGCAGTGTCAAGTCCTGC-----------------AGAGTTAACATGTGACCCTCTGACCCACATTCATACGGTATCTTAGAG--ACCAGATTCCCACTTC---TCATGTAATTCGTATGG-CAATCCCAGCCTGCTCAGCAAAAAGAGTCACAGCACCCAGGTGCGGCCTCCCCGGAAGCATCGCAGTCAATCGTCAGCTTGGGATTCTTTCCTTTCACTTCCTCCAGCAGCTTCTCGATTTCCAAACTAGTGTCATAGGTCTTCA i calJac3.chr22 I 3 C 0 s canFam3.chr1 20008659 470 - 122678785 CCATCTATGAACTT---AGTAGTATTTTTTCCTAGACTAAGTATGCCAAGTATAAAGTTAACCCTTAAGTTAGGTCTTAGGTACATTAATAAGCACAGTTTCAAACAAAGTTCTTTGCT--TTTACTATAGCTTGTGTCCTTGTGAAATAACAGACATTTTGACATAAAGTACGTGTGTGACTTGTGCAGAATTTACCATAAACCAGAGAGAAAGCCAGCACTAAATGCTACATTTTGACCCA------ATAATTAACATATTACCCTCTGGTCTTCATTCGTGGTGTGTCTAAGAGAAATAAGATCACCCCTTCAAGACACATAGTCACTAAAGATGGTCTCAGGGTGTTCAAGACAGGAAGTCACAACATGGAGACCTGCTTGCTCTGGCATCACTGCATTCAATGGTCAGATCTGGATTGTGGCCTTTCACATCTTTCAGCAGCTTCTGGATTTCCACGCTAGACTTGTCTATCTCCA i canFam3.chr1 C 0 C 0 a score=87095.000000 s hg38.chr19_GL949748v2_alt 903856 32 + 1064304 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- s panTro4.chr19 59844064 32 + 63644993 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- i panTro4.chr19 C 0 I 26 s ponAbe2.chr19 56755119 32 + 60714840 ACCTGGAAGGATCAGAGAACACAAATGTTCCC-------------------------- i ponAbe2.chr19 C 0 I 142 s nomLeu3.chr10 103292867 32 - 106955855 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- i nomLeu3.chr10 C 0 I 26 s rheMac3.chr19 60580740 32 + 64156825 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i rheMac3.chr19 C 0 I 26 s macFas5.chr19 55706906 32 + 59248254 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i macFas5.chr19 C 0 I 26 s papAnu2.chr19 47821823 32 + 51301725 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i papAnu2.chr19 C 0 I 26 s chlSab2.chr6 47535659 32 + 50890351 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i chlSab2.chr6 C 0 I 26 s calJac3.chr22 45890080 57 + 49145316 GCCTGGA-GGATCAGAGAACACAAATGTTTGCAGAGCGCCTACAGTTTCACTGTCCCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=773357.000000 s hg38.chr19_GL949748v2_alt 903888 323 + 1064304 AGAAATTCATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGAttttct-gggggacagggtct-----tgctctgttgcccaggctggggtacagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcaattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacgcttggctaagtt---ttgta-------tttacagt-----------------------agagatggggtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccatccacctcggcctc s panTro4.chr19 59844122 324 + 63644993 AGAAATTCATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTTCTGGGGGgacagggtct-----tgctctgttgcccaggctggggtacagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcaattctcatgcctcaggctcctgaataactgtgattacaggtgtgcaccaccacgcttggctaagtt---ttgta-------tttacagt-----------------------agagatagggtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccatcgacctcggcctc i panTro4.chr19 I 26 C 0 s ponAbe2.chr19 56755293 323 + 60714840 AGAAATACATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTC-AATCAGGAAACGTTTTTGGGATCTTCTGCGGGgacagggtct-----tgctctgttgcccaggctggggtgcagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcgattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacactcggctaagtt---ttgta-------tttacagt-----------------------agagacggggtttcgacatgttagccaggctgg-------------------------------tctcaaacttctggcctcaagtgatcagtccacctcggcctc i ponAbe2.chr19 I 142 C 0 s nomLeu3.chr10 103292925 324 - 106955855 AGAAATTCATTCTCAACTAACCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTTCTGGGGGgacagggtct-----tgctctgttgcccaggctggggtacagtggtgccattttggctctctgcaacctccagctcctgagttcaagcaattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacgctcggctaagtt---ttgta-------tttacagt-----------------------acagatggggtttcaacacgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccgtccacctcggcctc i nomLeu3.chr10 I 26 C 0 s rheMac3.chr19 60580798 328 + 64156825 AGAAATTCATTCTCAACTACCCAGGATGCCTGAACATCTGTCTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-TGGGGGGACAGGTTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctccgcaacctccaggtcccaggctaaagcgactctcatgccttagcctcctgagtaacggggattacaggtgtgcaccatcacgcttggctaagtt---ttgca-------tttacagt-----------------------agagatggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccatccccctcggcctc i rheMac3.chr19 I 26 C 0 s macFas5.chr19 55706964 328 + 59248254 AGAAATTCATTCTCAACTACCCAGGATGCCTGAACATCTGTCTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-TGGGGGGACAGGTTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctccgcaacctccaggtcccaggttcaagcgactctcatgccttagcctcctgagtaacggggattacaggtgtgcaccatcatgcttggctaagtt---ttgca-------tttacagt-----------------------agagacggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i macFas5.chr19 I 26 C 0 s papAnu2.chr19 47821881 346 + 51301725 AGAAATTCACTCTCAACTACCCAGGATGCCTGAACACCTGTTTTCAAACACTCAAAGCAGGAAACATTTTTGGGATTTT-TGGggggacagggtctggctctgctctgtggcccaggctggggtgcagtggtgccatcttggctctctgcaacctccaggtcccaggttcaagcgactctcatgccttagcctcc----taacagggattacaggtgtgcaccatcacgcttggctaagtt---tt-ta-------tttACAGGCTAAGTTTTGTAAATGCCGCCTAAGAGGTGGcatttcaacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i papAnu2.chr19 I 26 I 1232 s chlSab2.chr6 47535717 328 + 50890351 AGAAATTCACTCTCAACTACCCAGGATGCCTGAACACCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-GGGGAGGACAGGGTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctctgcaacctccaggtcccaggttcaagcgattctcatgtcttagcctcctgagtaacagggattacaggtgtgcgccaccacgcttggctaagtt---ttgta-------tttatagt-----------------------agaggcggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i chlSab2.chr6 I 26 C 0 s calJac3.chr22 45890137 306 + 49145316 AGAAATTCA--CTCAGTTACCCAGGATGCCTGAATATGTTTTCttg---------------------tttcgttgttttttttagagacagggttt-----caccatgttagccaggatgg-------------------------tcccgatctactgacctcagg--------atccgcctgcctcagcctcccaaaattctgggattacaggcatgagccactgcgcccagcaggattcacttataaagctgcttcactgt--------------------------gactggttgtggccacaatgcccaggctggagtacaatggtgccatcttgactcactgcaacctccagttcctgggttcgagtgattctcatgcctcagcctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=67054.000000 s hg38.chr19_GL949748v2_alt 904211 31 + 1064304 ccaaagccatgggattacagatgtgagccac s panTro4.chr19 59844446 31 + 63644993 ccaaagccatgggattacagatgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755616 31 + 60714840 ccaaagccatgggattacagacatgagccat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293249 31 - 106955855 ccaaagccatgggattacagacgtgagccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581126 31 + 64156825 ccaaagccatgggattacagatgtgagccac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707292 31 + 59248254 ccaaagccatgggattacagatgtgagccac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536045 31 + 50890351 ccaaagccatgggattacagatgtgagccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890443 31 + 49145316 ctgagtatctgtgattacaggtgtgcaccac i calJac3.chr22 C 0 I 278 e canFam3.chr1 20009129 0 - 122678785 C e papAnu2.chr19 47822227 1232 + 51301725 I a score=3279.000000 s hg38.chr19_GL949748v2_alt 904242 2 + 1064304 ag s panTro4.chr19 59844477 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755647 2 + 60714840 gg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293280 2 - 106955855 ag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581157 2 + 64156825 ag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707323 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536076 2 + 50890351 ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45890474 278 + 49145316 I e papAnu2.chr19 47822227 1232 + 51301725 I a score=139371.000000 s hg38.chr19_GL949748v2_alt 904244 63 + 1064304 cacccagtcAGAAAAGTTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTATAAGT s panTro4.chr19 59844479 63 + 63644993 cacccagccAGAAAGGTTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTATAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755649 60 + 60714840 cacccggccAGAAACGTTTTCTAAA---AAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293282 63 - 106955855 cacccggccAGAAACGTTTTCTAAAAAGAAATTTAGATCCACACAAGGGGGA-TCCTTATAAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581159 63 + 64156825 cacccagccAGAAACATTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707325 63 + 59248254 cacccagccAGAAACATTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536078 63 + 50890351 cacccagccAGAAACGTTTTCTAAAAAGAAATTTAGACACACACAATGGGGA-TCCTTATAAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890752 64 + 49145316 cacccggcTGGAAACATTTTCTAAAAAAGAATTTAGATCCACACAATGAGAATTCCTTATAAGT i calJac3.chr22 I 278 C 0 e canFam3.chr1 20009129 0 - 122678785 C e papAnu2.chr19 47822227 1232 + 51301725 I a score=249104.000000 s hg38.chr19_GL949748v2_alt 904307 147 + 1064304 CTAAGA----AAAAAAAGATTATggccaggcacggtgtctcgcacctgtagtcccagcactttgggaggccaaggcaggcagattgcttgagctccgcagttcaaggccagcctgggcaacacgg------------------------------------------------------------tgaaaccctgtctctacc--------aaaaatag s panTro4.chr19 59844542 147 + 63644993 CTAAGA----AAAAAGAGATTATggccaggcacggtgtctcgcacctgtagtcccagcgctttgggaggccaaggcaggcagattgcttgagctccacagttcaaggccagcctgggcaacacag------------------------------------------------------------tgaaaccctgtctctacc--------aaaaatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755709 147 + 60714840 CTAAGA----AAAAAAAGATTATggccaggcccggtgtctcacacctgtagtcccagcactttgggaggccaaggcaggcagatcgcttgagctcagcagttcaagaccagcctgggcaacacgg------------------------------------------------------------tgaaaccgtgtctctacc--------aaaaatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293345 120 - 106955855 CTAAGA----AAAAAAAGATTATggccaggcccggtgtctcacacctgtagtcccagaactttgggaggccaagtcaggcagattgcttgagctcagcagttcaa--------------------------------------------------------------------------------------catgtc-cagct--------aaaaatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581222 141 + 64156825 CTAAGA----AAAAAGA--TTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggctggcggattgc--------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707388 145 + 59248254 CTAAGA----AAAAAGA--TTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggctggcagattgcttgagctcagcagttcaagaccagactgggcaacacag------------------------------------------------------------caaaaccctgtctctacc--------aaaaatac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47823459 153 + 51301725 ctaaaaatacaaaaaaa--t--tggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacaggcggatcac--gaggtcaggagatcgagaccatcctggctaacacgg------------------------------------------------------------tgaaaccccgtctctactaaaaaaaaaaaaatac i papAnu2.chr19 I 1232 C 0 s chlSab2.chr6 47536141 144 + 50890351 CTAAGA----AAAAACAGCTTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggccggcagattgcttgagctcagcagttcaagacaagcctgggcaacacag------------------------------------------------------------cgaaaccctgtctct-----------aaaaatac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890816 135 + 49145316 CTAAGA----AAAAAAG-ATTATGGCCAGGCACAG-----------tgtaattccagctctttgggaggctgcaggaggcagatcacttgagctcaggagttcaagacctgcccaggtaacacag------------------------------------------------------------tgaaatcctgcctctacc--------aaaactac i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=732870.000000 s hg38.chr19_GL949748v2_alt 904454 451 + 1064304 aaaaagttagccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggcggaggcaagaggatcacttgagcccaggaggcggaggttgcaacgagctagagattgccctactgcactccagcct-ggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaTAGATAATCAggctggtgcacggtgactcacgcctataattccagcactttgggaggccgaggcgggcagatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccaac-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcatggtggcagacaactgtaataccagctactcaggaggctgagacaggagaatcgctttgaacctgggaggcagatgttgcagtgagc-----------------------------------------------------------------------------------------------caataccgcaccactgtactgcagcccgggtgaca- s panTro4.chr19 59844689 447 + 63644993 aaaa----agccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggcggaggcaggaggatcacttgggcccacgaggcggaggtttcaacgagctagagattgccctactgcactccagcct-ggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaCAGATAATCAggctggtgcacggtgactcacgcctataattccagcactttgggaggccgaggcgggcagatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccagc-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcatggtggcagacaactgtaataccagctactcaggaggctgagacaggagaatcgctttgaacctgggaggcagatgttgcagtaagc-----------------------------------------------------------------------------------------------caatatcgcaccactgtactgcagcccgggtgcca- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755856 448 + 60714840 aaaaagttagccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggcagaggttgcaacgagctggagattgccctactgcactccagcctgggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaTAGATAATCAggccggtgcacggtggctcacgcctataattccagcactttgggaggccaagacgggtggatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccaac-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcgtggtggcagacaactgtaataccagctacttaggaggctgagacaggagaatcactttgaacctgggagaca----ttgcagtgagc-----------------------------------------------------------------------------------------------caatatcgcgccactgtactgcagcctgggtgaca- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60581363 450 + 64156825 --------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------gaggctgaggcaggaggatcacttgagcccaggaggcggaggttgcaacaagatagagattgccctactgcactccagcctgggtaacacagtaaaacatgtctttaaaaaaataaaTTTGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggcgggcagatcacctgagattgggagttcaaga-------------------------------ccagcctgaccaac-atggagaaacaccatctc------------tactaacaatacaaaaaaattagccaggcatggtggcccatgctcaccatcccagctactcaggaggctgaggcaggagaattgc-ctgaacccgggaggcagaggttgcagtgagc-----------------------------------------------------------------------------------------------taaaattgcaccacggcactccagcctgggtaaca- i rheMac3.chr19 C 0 I 700 s macFas5.chr19 55707533 452 + 59248254 aaaaagttaggcaggaatgg----------------------------------------------tgatgcatgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggcggaggttgcaacaagatagagattgccctactgcactccagcctgggtaacacagtaaaacatgtctttaaaaaaataaaTTTGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggtgggcagatcacctgaggtcaggagttcgaga-------------------------------ccagcctggccaac-atagtgaaaacccgtctc------------tactaaaaatac--aaaaattagctggttgtggtggcagacacctgaaataccagctactcaggaggctgagacatgagaatcactttgaacctgggaggtggacgttgcagtgagc-----------------------------------------------------------------------------------------------caatatcatgccactgtactgcaaccc-ggtgaca- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47823612 572 + 51301725 aaaaaactagccgggcgcag----------------------------------------------tggcgggcgcctgtagtcccaactactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagtttgcagtgagct-gagatccagccactgcactccagcctaggcggcagagcgagactccatctcaaaaaaaaaaattag------------------ccgggcatggtggcccatgctcgcaatcccagctactcaggaggctgaggcagaagaatcacttgaacctgggaggctgaggttgcagtgagcagagatcacaccattgccctctagcctgggcaataagagtgaaactccgtctcaaaaaagtaaaataaaataaatac--aaaaattagccaggcatgctggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgc-ttgaacccgggaggcagaggttgcagtgagcaggagaattgcttgaggcagTGTGAGAGAATTGCAGTGAGGCAGGATtgcagtgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgagattgcaccactgcactccagcctgggcaaca- i papAnu2.chr19 C 0 I 25 s chlSab2.chr6 47536285 452 + 50890351 aaaaagttagccaggaatgg----------------------------------------------tggtgcatgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggtggaggttgcaacaagatggagattgccctactgcactccagcctgggtaacacagtaaaacatgtcttt-aaaaaataaaTTCGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggcgggcagatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaac-attgtgaaaacctgtctc------------tactaaaaatac--aaaaattagctggttgtggtggcagacacctgaaataccagctactcaggaggctgagacatgagaatcactttgaacctgggaggcagacgttacagtgagc-----------------------------------------------------------------------------------------------caatatcgtgccactgtactgcaacctgggtgaca- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890951 408 + 49145316 aaaa----agccaggaatgg----------------------------------------------tagtacacacctatagtcccagctagtcaggaggctgagacagcaggatcacttaagcgcaggaggcagaggttgcaacgagctggagatggccctactgca-tttagcctgggtaaca-----aaATATGTCTTT-----------------------------Aggccggcgc--ggtggctcatgcctgtaatcccagcactttgggaggccgagacgggtggatcac--gaggttgaga--ttgaga-------------------------------ccatcctggtcaac-gtggtgaaacgccgtctc------------gactaaaaatac--aaaaattagctggtcacggtggcgcgtgcctgtagtcccagctactggggaggctgaggcaggagaattgc-ctgaacccaggaggtggaggttgcggtgagc-----------------------------------------------------------------------------------------------caagatcgcatcattgcactccagcctgggtaacaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=20617.000000 s hg38.chr19_GL949748v2_alt 904905 14 + 1064304 gagcgagactctgc s panTro4.chr19 59845136 14 + 63644993 gagcgagactctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756304 14 + 60714840 gagtaagactctgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55707985 14 + 59248254 gagcaagactctgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47824209 14 + 51301725 gaaaaagactttgt i papAnu2.chr19 I 25 C 0 s chlSab2.chr6 47536737 14 + 50890351 gagcaagactctgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891359 14 + 49145316 gagcaaaactccgt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60581813 700 + 64156825 I a score=4438.000000 s hg38.chr19_GL949748v2_alt 904919 3 + 1064304 ctc s panTro4.chr19 59845150 3 + 63644993 ctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756318 3 + 60714840 ctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582513 3 + 64156825 CTC i rheMac3.chr19 I 700 C 0 s macFas5.chr19 55707999 3 + 59248254 ctc i macFas5.chr19 C 0 I 606 s papAnu2.chr19 47824223 3 + 51301725 ctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47536751 3 + 50890351 ctc i chlSab2.chr6 C 0 I 631 s calJac3.chr22 45891373 2 + 49145316 ct- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=21904.000000 s hg38.chr19_GL949748v2_alt 904922 14 + 1064304 caaa--------------------taaataaata s panTro4.chr19 59845153 14 + 63644993 caaa--------------------taaataaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756321 14 + 60714840 caaa--------------------taaataaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582516 14 + 64156825 CAAA--------------------TAGATAAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55708608 34 + 59248254 caaacaagaaaaaGACTCTGTCTCCAAATAAATA i macFas5.chr19 I 606 C 0 s papAnu2.chr19 47824226 14 + 51301725 caaa--------------------tagataaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47537385 14 + 50890351 CAAA--------------------TAGATAAATA i chlSab2.chr6 I 631 C 0 s calJac3.chr22 45891375 14 + 49145316 caaa--------------------aaaaTATATA i calJac3.chr22 C 0 I 306 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=1238589.000000 s hg38.chr19_GL949748v2_alt 904936 752 + 1064304 aaaaaTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATGATAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGGGTGGTGAttgtggagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccaaagGAGGAACTGAGGAATGAGAAAAGAAAT-ACGCCCCAAACATATGACATAAGAGACCACAGGGGGCTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCTCGGTCCCACCAACAAGAGAAGCATGACACTATTTAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagac--gtgtgaaaaatcgt------------accttgagcaggatataaataactcccacatgcttagcgttccaataatgcaacactgggcatCATGAAGCAGTTTACATGCGTATCATCTCTACAACTAAAATAACTCTTGAATAAGACAAGTGggctgtgcacagtggctcacgcctgcaatccgggtactttgtgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---cctcggcaacacggccacacagtgcagcagagcaaaacgttgtctcag---------------------------------------aaaagaaaa-------------gacaaaGGCAAGAAGAAACTAAAGGTAGATTACGTTA s panTro4.chr19 59845167 772 + 63644993 aaaaaTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAGTGATAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGGGTGGTGAttgtggagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccaaagAAGGAACTGAGGAATGAGAAAAGAAAT-ACGCCCAAAAC--ATGACATAAGAGACCACAGGGGGCTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCTCGGTCCCACCAACAAGAGAAGCATGACACTATTTAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagac--gtgtgaaaaattgt------------accttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactgggcatCATGAAGCAGTTTACATGCGTATCATCTCTACAACTAAAATAACTCTTGAATAAGACAAGTGggctgtgcacagtggctcacgcctgcaatcccggtactttttgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---cctcggcaacatggccacacagtgccacagagcaaaacgttgtctcag-aaaagaaaa-----gaaaagaaaagaa-----------aaaagaaaa-------------gagaaagGCAAGAAGAAACTAAAGGTAGATTACGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756335 762 + 60714840 aaaaaTAGTGGCGAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATGAGAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGAGTGGTGAttgtagagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgat-ctcccaccttggcctccca---gagGAACTGAAGAATGAGAACAGAAAT-ACGCCCAAAACATGTGACATAAGAGACCACAGGGGGCTAGAGATTTGTCAACAATAGTCCTTGGTGGCATGACAGACCTCGGTCCCACCAGCAAGAGAAGCATGACACTATTGAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcctaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactgggcatCATTAAGCAGTTTACATGTGTATCATCTCTACAGCTAAAATAACTCTTGAATAAGACAAGTGGgctgtgcacagtggctcacgcctgcaatctcagtactttgtgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---ccttggcaacacagcCACACAGTGCAACAGAGCAAAACGTTGTCTCAG---------------------------------------AAAAGAAAA-------------GAGAAAGGCAAGAAGAAACTAAAGGTAGATTATGTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582530 736 + 64156825 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGATAGCGGCATGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccagagGAGGAACTGAGGAATGAGAACAGAAATAACATCCAAAACATATGACATAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGATCATGGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTGAACTTTCAT-ATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaagtgcagacatgtgtgaaaaatcgtaccttgggaatgaccttgagcaggatataaataactcccacatgcttagcattccaataatggaacactagacatCGTTAAGCAGTTTAAATGCGTATCATCTCTACAACTA----AACTCTTGAACAAGACAAGTGggctgtgcacagtggctcacgcctataatcctagtgctttgtgaggccaagacaggaggatcgctcgaagccaggagtttgagaacagccttggcaacatagcTACATAGTACAGCAGAGCAAAACATTGTCTaaagaaaaggaaa-----------------------------agggccggg-------------------------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55708642 808 + 59248254 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGATAGCAGCACGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccagaggaggaactgagGAATGAGAACAGAAATAACATCCAAAACATATGACACAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCATGGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTGAACTTTCAT-ATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcgtaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcattccaataatggaacactagacatCGTTAAGCAGTTTAAATGCGTATcatctctacaacta----aactcttgaacaagacaagtgggctgtgcacagtggctcacgcctataatcctagtgctttgtgaggccaagacaggaggatcgctcgaagccaggagtttgagaacagccttggcaacatagctacatagtacagcagagcaaaacattgtctcaagaaaaggaaaggacagaaaagggaaaagggtaag-----aggaaaggggaaagggaaaaa-gaaaaaggcaagaagaaaCT-GAGGTAGATTATGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47824240 794 + 51301725 aaaactagTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGACAGCAGCATGCAACGCTGTGCTTGTGAACATGAGGGGTGGTCATTGTAGAGGCACtggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgatcctcccaccttggcctcccagaggagGAACTGAGGAATGAGAACAGAAAT-ACGTCCAAAACATATGACATAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCATGGTCCCACTAGCAAGAGAAACATGACACTGTATAGCTCAACTTTCATGATATACCCCTAAAACCTTAACTCATTTATGCCAGAGGTTACAATTATTTGAACTGCAGAC--GTGTGAAAAATCGtaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactagacATCGTTAAGCAGTTTACATGCGTA-----TCTACAACTA----AACTCTTGAACAAGACAAgtgggctgtgcacagtggctcacgtctgtaatcctagtactttgtgaggccaacacaggaggatccctcgaagccaggagtttgagaacagccttggcaacatagctaCATAGTACAGCAGAGCAAAACATTGtctcaagaaaaggaaaggacagaaaagggaaaagggaaaggggaaagggaaaaa-------------gaaaaaggcaagaagaaact-gaggtagattatgtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47537399 800 + 50890351 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGATTGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACATGGCTCTAACATGACAGCAGCATGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgatcctcccaccttggcctcccagaggaggaactgagGAATGATAACAGAAAT-ACGTCCAAAACATATGACACAAGAGACCTCA--GGGTTGGAGATTTGTCACCAATAGTCCTTGGTGGCATTATAGACCATAGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTCAACTTTCATGATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcgtaccttgttaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataacggaacactagacatCGTTAAGCAGTTTAAATGTGTATcatctcta----ta----aactcttgaacaagacaagtgggctgtgcacagtggctcacgcctataatcctagtactttgcgaggccaacgcaggaggatcgcttgaagccaggagtttgagaacagccttggcaacatagctacatagtacagcagagcaaaacattgtctcaggaaaaggaaa-----ggagagggaaaagggtaag-----gggaaaggggaaagggaaaaagaaaaaaggcaaGAAGAAACT-GAGGTGGACTATGtta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=305770.000000 s hg38.chr19_GL949748v2_alt 905688 283 + 1064304 AAATAAGTCACTGAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaattcgagaccagcctggccaacatagtgaaaccccatctctact-aaaaatac-aaaaaattagccgggcgtggtggcgggcgcct--------------------gtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcgcaccgcttcactccagcctgggcgacagag s panTro4.chr19 59845939 282 + 63644993 AAATAAGTCACTGAggccgggcgcagtggctcacgcctgtaatctcagcactttgggaggccgaggcgggcggatcac--gaagtcaggagatcaagaccatcctggctaacacagcgaaaccccgtctctact-aaaaatacaaaaaaattagccgggcatggtggcgggcgcct--------------------gtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcgcaccgcttcactccagcctgggcgacagag i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583266 248 + 64156825 ---------------------cgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac--aaggtcagcagatcgagac------------gacggtgaaaccccgtctctact-aaaaatac-aaaaaattagccgggcgcggtggcgggcgcct--------------------gtagtcccagctactcaggaggctgaggcaggagaatggcgtaaacccaggaggcggagcttgcattgagccgagatcgtgccactgcactccagcctgggcgacagag i rheMac3.chr19 C 0 I 413 s macFas5.chr19 55709450 275 + 59248254 AAATAAGTCATTGA-------Tgtggtggctcaagcctgtaaccccagcactctgggaggccgagacgggcagatcgc--aaggtcaggagatcgagaccaccctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagccaggcgaggtggcgggcgcct--------------------gtagtcccagctactcaggaggctgaggcgggagaatggcatgaacccgggaggcggagcttgcagtgagctgagatctggccactgcactccagcctgggcgacacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825034 274 + 51301725 aaataagtcattga-------tgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcat--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagccgggcgtggtggcgggcgcct--------------------gtagtcccagctactcgggacgctgaggcgggagaatggcgtgaacccaggaggcagagcttgcagtgagctgagatccagccactgcactccagcctgggcgacaga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538199 295 + 50890351 aaataagttattga-------tgcagtggctcaagcctgtaattccagcactctgggaggccgagacgggcagatcgc--gaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagctgggcgaggtggcgggcgcctgtagtcccagctactcgggagtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatgcggccactgcactccagcgcgggcgacagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=-4645.000000 s hg38.chr19_GL949748v2_alt 905971 65 + 1064304 actggagtctctgtctcaaaaaaaagacagattcaaaaaaaaagaCAGACT----------CCGTCTCAAAAAAA s panTro4.chr19 59846221 75 + 63644993 actggagtctctgtctcaaaaaaaagacagattcaaaaaaaaagaCAGACTCAAAAAAAGACTGTCTCAAAAAAA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55709725 2 + 59248254 -cg------------------------------------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825308 22 + 51301725 acggga--ctccatctcaaaaaaa--------------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538494 21 + 50890351 -caaga--ctccatctcaaaaaaa--------------------------------------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60583514 413 + 64156825 I a score=3018.000000 s hg38.chr19_GL949748v2_alt 906036 5 + 1064304 AGACT s panTro4.chr19 59846296 5 + 63644993 AGACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583927 5 + 64156825 agact i rheMac3.chr19 I 413 C 0 s macFas5.chr19 55709727 5 + 59248254 agact i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47538515 5 + 50890351 ataat i chlSab2.chr6 C 0 I 14 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e papAnu2.chr19 47825330 0 + 51301725 C a score=6419.000000 s hg38.chr19_GL949748v2_alt 906041 20 + 1064304 CCGTCTCAAAAAAAAATAAA s panTro4.chr19 59846301 20 + 63644993 CCATCTCAAAAAAAAATAAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583932 18 + 64156825 ccgtctcaaaaaaaaata-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709732 18 + 59248254 ccgtctcaaaaaaaaata-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825330 3 + 51301725 ---------------ata-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47538520 14 + 50890351 I a score=4633.000000 s hg38.chr19_GL949748v2_alt 906061 6 + 1064304 AAATAC s panTro4.chr19 59846321 6 + 63644993 AAATAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583950 6 + 64156825 aaatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709750 6 + 59248254 aaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825333 6 + 51301725 aaataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538534 6 + 50890351 aaatta i chlSab2.chr6 I 14 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=902897.000000 s hg38.chr19_GL949748v2_alt 906067 535 + 1064304 AAATAAGTCATTGAAAAGATATACACGGGTCACAACTAAGGGAGCATCTGTAGGACGATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGATTAGGGgtgtgtg--------tgtgtgtgtgtgtgtgCTCATGCACACACATACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGGACTAAGTGTTTTGGGGGAAA-GTTGGACAATATTCAATTCACAGAGCATTTTAGAAAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTACACACACTCCC-AAAAAA--A-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggccgagcacagtggctcacgcctgtaatcccggcactttgagaggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac s panTro4.chr19 59846327 533 + 63644993 AAATAAGTCATTGAAAAGATATACATGGGTCACAACTAAGGGAGCATCTGTAGGACAATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGATTAGGG--GTGTG--------TGTGTGTGTGTGTATGCTCATGCACACACATACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGGACTAAGTGTTTTGGGGGAAA-GTTGGACAATATTCAATTCACAGAGCATTTTAGAAAAGTATCTAATTTTTAAATTATCTCCTAAGCTAAGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTACACTCACTCCC-AAAAAA--A-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggccgggcacagtggctcacacctgtaatcccagcactttgagaggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757097 505 + 60714840 AAATAAGTCATTGAAAAGATATACACAGTTCACAATTAAGGGAACATCTGTAGGACGATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGAT----------------------------------------TGCAAACACACACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGTACTAAGTGTTTTGGGGGGAATGTTGGACAATATTCAATTCACAGAGCATTTTAGAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTGCACCCACTCCC-AAAAAA--AGCTCTTCTCTGCATGTGAAATTCACCATGTGAAACAGCCATCCCAGggccgggcacagtggctcacacctgtaatcccagcattttgagaggctgaggcaggtggatcacctgaagttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60583956 535 + 64156825 aaataaGTCATTGAAAAGATATACATGGTTCACAATTAAGGGAACATCTGTAGGATGATTTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGTGATGAGGG--GGGTG--------TGTGTGCGTGTGTACGCTCATGCACACACATACACTCAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTTGGGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTACAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAAGAGTGCACCCACTCCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggctgggtgtggtggctcacacctgtaatcccagcactttgaggggctgaggcgggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtttctac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709756 535 + 59248254 aaataaGTCATTGAAAAGATATACATGGTTCACAATTAAGGGAACATCTGTAGGATGATCTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGCGATGAGGG--GGGTG--------TGTGTGCGTGTGTACGCTCATGCACACACATACACTCAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTTGGGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTACAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAACAGTGCACCCACTCCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggctgggtgtggtggctcacacctgtaatcccagcactttgaggggctgaggcgggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtttctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825339 535 + 51301725 aaataagtcatttaaaaGATATACATGGCTCACAATTATGGGAACATCTGTGGTACGATCCTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATGTAGCGAtgaggg--gggtg--------tgtgtgcatgtgtgcgtgtgtacgCTCATGTACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTT-GGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTAGAGaagtatctaatttttaaattatctcctAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAAGAGTGCACCCACTTCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCagggctgggtgtgttggctcacacctgtaatcccagcactttgaggggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccctggtctctac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538540 538 + 50890351 aaataaGTCATTTAAAAGATATACATGGTTCACAATTACGGGAACATCTGTGGGATGATCTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGTGATGAGGG--GGCTGTGTGTGCATGTGTGCGTGTGTACGCTCATGCACACACATACACACAAGCTTCCAGTCTATACTCCAGGATGATCTAAACTGTCAGTAAGCCAAGTACTAAGTGTTG-GGGGGAAC-GTTGGACAATATTCAATTCACAGAGCATTTTAGAGAAATATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTACAGAAAGATGCC-----TTGATTCCTACAAACAGTGCACCCACTCCCAAAAAAAATA-CTCTTCTCTGCATGAGAAATTCACCATGTGGAACAGCCATCCCAGggccgggtgtgttggctcacacctgtaatcccagcactttgaggggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtctctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=95115.000000 s hg38.chr19_GL949748v2_alt 906602 45 + 1064304 taaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa s panTro4.chr19 59846860 45 + 63644993 taaaaacta-----caaaaattggccaggtgccgtggctcatgcctgtaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757602 45 + 60714840 taaaaacta-----caaaaattggccaggtgccgtgactcatgcctgtaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60584491 45 + 64156825 tgaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa i rheMac3.chr19 C 0 I 274 s macFas5.chr19 55710291 45 + 59248254 tgaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825874 45 + 51301725 taaaaacta-----caaaaattggccaggtgtagtggctcatgcctgtaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539078 45 + 50890351 taaaaacta-----caaaaattgaccaggtgcagtggctcatgcctgtaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891695 50 + 49145316 TAAAAACAAAGTGGCAAATCATGGCCATTTgtggtggttcacacctataa i calJac3.chr22 I 306 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=253210.000000 s hg38.chr19_GL949748v2_alt 906647 161 + 1064304 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcga-gcgactgtaatcctagctactcaggaggctgaggca s panTro4.chr19 59846905 161 + 63644993 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcga-gcgactgtaatcctagctactcaggaggctgaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757647 161 + 60714840 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcaaaacaccgtctctactaaaaatacaaaaattagctgggcgtggtggcgg-gcgcctgtagtcctagctactcgggaggctgaggca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55710336 161 + 59248254 ctccagcactttggaaggccaaggcaggcagatcacctgaggtcaggagctcaagaccagcctggccaatatggtgaaaccctgtctctactaaaagtacaaaaattagtcgggcgtggtggcaa-gcaactgtaatcccagctactcaggaggctgaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825919 147 + 51301725 ctccagcactttggaaggccaaggcaggcagatcacctgaggtcaggagctcaagacca--------------gtgaaaccctgtctctactaaaagtacaaaaattagccgggcgtggtggcaa-gcgactgtaatcccagctactcaggaggctgaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539123 161 + 50890351 tcccagcactttagaaggccaaggcaggcagatcacctgaggtcaggagctcaagaccagcctggccaatatggtgaaatcccgtctctactaaaaatacaaaaattagccaggcgtggtggcaa-gcgactgtaatcccagctactcaggaggctgaggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891745 156 + 49145316 tcccagcactttggg------aggcaggaggatctcatgaggtcatgagttcgagatcagcccaaccaacatggtaaatccccgtctgtactaaaaatacaaacattagctgggtgtggtggcaaggggactgtaatcgcagctactcaggaggctgaggca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60584536 274 + 64156825 I a score=27749.000000 s hg38.chr19_GL949748v2_alt 906808 28 + 1064304 ggagaatcacttgaacccaggaggcaga s panTro4.chr19 59847066 28 + 63644993 ggagaatcacttgaacccaggaggcaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757808 28 + 60714840 ggagaatcacttgaacccaagaggtgga i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55710497 28 + 59248254 ggaaaatcacttgaacccagggagcgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826066 28 + 51301725 ggaaaatcgcttgaacccagggagcgga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45891901 21 + 49145316 ggagaatcgcttaaacccagg------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e rheMac3.chr19 60584536 274 + 64156825 I a score=91418.000000 s hg38.chr19_GL949748v2_alt 906836 222 + 1064304 ggttgcactgagccgagatagcgccactgcactccagcctgggggacagagagagactctgtcttt-----------aaaaaaaaaaaaaaaaaaaaaaaattagccagctgtggtggtgtgtacctgtaatcccagctactcaggaggttgaggcaggaaaatcgcttcaacctgtgagaaggaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcaac--a s panTro4.chr19 59847094 235 + 63644993 ggttgtactgagccgagatagcgccactgcactccagcctgggcgacagagagagactctgtctttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattagccagctgtggtggtgtgtacctgtaatcccagctactcaggaggttgaggcaggaaaattgcttcaacctgtgagaaggaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcaacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757836 217 + 60714840 ggttgcactgagctgagatagcgccactgcactccagcctgggcgacagagagagactctgtctt--------------aaaaaaaaaaaaaaaaaaaaaattagccagctgtggtg--gtgtacctgtaatcccagctactcaggaggttgaggcagaaaaatcgtttcaacctgtgagacagaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcgac--a i ponAbe2.chr19 C 0 I 6 s calJac3.chr22 45891922 217 + 49145316 --ttacagtgagctgagctagagccactgcattctaggctgggcaacagagtgagatttcatctc-------------agaaTACATATTATACACAAAAATTAgccaggcgtggtgctgcgtacctgtaatcccagctacagaggaggctga-gcaggagaatcacttgaacttgtgaagtaggggctgcagtgagtcaagactgcaccactgcactccagcctgggcaac--a i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=2801.000000 s hg38.chr19_GL949748v2_alt 907058 11 + 1064304 --gtgagactcca s panTro4.chr19 59847329 11 + 63644993 --gtgagactcca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45892139 13 + 49145316 gagcgagactcca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758053 6 + 60714840 I e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=61169.000000 s hg38.chr19_GL949748v2_alt 907069 143 + 1064304 tcccaaaaagcaaaaaccaaaaaggccgggtgcaatggctcacctctgtaatcccaccactttgggaggccgaggcaggtggctcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacccctctctacta s panTro4.chr19 59847340 140 + 63644993 tcccaaaaagcaaaaaccaaaaaggccgggtgcaatggttcacctctgtaatc---ccactttgggaggccgaggcaggtggctcacctgaggtcaggagttcaagactagcctgggcaacatggtgaaacccctctctacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758059 143 + 60714840 tcccaaaaagcaaaaaacaaaaaggccgggtgcaatggctcacatctgcaatcccaccactttgggaggccaaggcaggtggctcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacccctctctacta i ponAbe2.chr19 I 6 I 7 s calJac3.chr22 45892152 131 + 49145316 tcccaaaaaggaaaaaa-aaaaagtccaggtacaatggctcatgtctgtaatcccagcactttggaaggccaagataggtggctcacccgaggtcaggagttc-agaccagcctggccaagatggtgaaatac---------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=29303.000000 s hg38.chr19_GL949748v2_alt 907212 61 + 1064304 aaaaattagccaggcatggtggcaggcatctgtaattccagctacttgggagg-ccaaggtg s panTro4.chr19 59847480 61 + 63644993 aaaaattagccaggcgtggtggcaggcatctgtaattccagctacttgagagg-ccaaggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293465 61 - 106955855 aaaaattagccgggcgtggtggcaggcatctgtaatcccagctacttgggagg-ccaaggtg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45892283 62 + 49145316 agaaattagctggatgtggtagtaggcacctgtaatcccagctacttgggaggcccaaggtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=22225.000000 s hg38.chr19_GL949748v2_alt 907273 28 + 1064304 ggagaatcgcttgaacccaggaggtggg s panTro4.chr19 59847541 28 + 63644993 ggagaatcgcttgaacccaggaggtggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293526 28 - 106955855 ggagaatcgcttgaacccaggaggtgga i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47539284 28 + 50890351 agaaaatcgcttgaacccagggggtgga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892345 28 + 49145316 ggagaattgcttgaacccgggacatgga i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=36775.000000 s hg38.chr19_GL949748v2_alt 907301 23 + 1064304 ggttgcagtgagccaagatcgca s panTro4.chr19 59847569 23 + 63644993 ggttgcagtgagccaagatcgca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293554 23 - 106955855 ggttgcattgagccaagatcgca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55710525 23 + 59248254 gcttgcagtgagccgagatcgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826094 23 + 51301725 gcttgcagtgagccgagatcgca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539312 23 + 50890351 gcttgcagtgagccgagatcgta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892373 23 + 49145316 ggttccagtgagctgagatcata i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e rheMac3.chr19 60584536 274 + 64156825 I a score=68094.000000 s hg38.chr19_GL949748v2_alt 907324 65 + 1064304 ccactgcactccagcctgggctacaagaacaaaactcc--gtctcaaaaaaaaaaaaagaaaaagaa s nomLeu3.chr10 103293577 67 - 106955855 ccactgcactccagactgggctgcaagaacaaaactccccatctcaaaaaaaaaaaaagaaaaagaa i nomLeu3.chr10 C 0 I 8 s macFas5.chr19 55710548 65 + 59248254 ccactgcactccagcctgggctacaagagcgaaactcc--gtctcaaaaaaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826117 65 + 51301725 ccactgcattccagcttgggttacAAGAGGgaaattcc--ttttcaaaaaaaaaaaaaaaaaaagaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539335 65 + 50890351 ccactgcactacagcctgggctacaagagcgaaactcc--atctcaaaaaaaaaaaaagaaaaaata i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892396 63 + 49145316 tcactgcactccggcctaggctacaagagagaaactct--att--aaaaaaaaaaaaaaaaaaggaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e rheMac3.chr19 60584536 274 + 64156825 I e panTro4.chr19 59847592 0 + 63644993 C a score=4242.000000 s hg38.chr19_GL949748v2_alt 907389 4 + 1064304 --------aaaa s ponAbe2.chr19 56758209 4 + 60714840 --------aaaa i ponAbe2.chr19 I 7 C 0 s nomLeu3.chr10 103293652 4 - 106955855 --------aaaa i nomLeu3.chr10 I 8 C 0 s macFas5.chr19 55710613 4 + 59248254 --------aaga i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47826182 4 + 51301725 --------aaaa i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 47539400 4 + 50890351 --------caaa i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45892459 12 + 49145316 agaaatacaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e rheMac3.chr19 60584536 274 + 64156825 I e panTro4.chr19 59847592 0 + 63644993 C a score=250450.000000 s hg38.chr19_GL949748v2_alt 907393 106 + 1064304 attagctggacatgttggcatgcctctaggcccagctactcatgaggctgaggcaggagaattgcttgaacctgagaggcagaggttgcggtgagccaagattgcg s ponAbe2.chr19 56758213 106 + 60714840 attagccgggcatggtggcaggcctctaggcctagctactctggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgtggtgagccaagatcgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293656 106 - 106955855 attagctggacatgttggcatgcctctaggcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccaagatctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584810 106 + 64156825 attagctggacatgctggcgtgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcagtgagcctagatcgcg i rheMac3.chr19 I 274 C 0 s macFas5.chr19 55710630 106 + 59248254 attagctggacatgctggcgtgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcagtgagccaagatcgcg i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47826194 106 + 51301725 attagctggacatgctggcgtgcctgtaggcccagttattcaggaggctgaggcaggagaattgcttgaacttgggaggcgggggttgcggtgagccaagatcgcg i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 47539405 106 + 50890351 attagctggacatgctggcatgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcggtgagccaagatcgcg i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45892471 106 + 49145316 attagctgggcgtgctggcacacctgtaggcccagctactcaggaggctgaggcaggagaattgcctgaacctgggaggcagaggttgcagtgagccaagatcaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e panTro4.chr19 59847592 0 + 63644993 C a score=135934.000000 s hg38.chr19_GL949748v2_alt 907499 89 + 1064304 ccactgcactccagcctgaatgacagagcacgactccatctcaaaaaaacaaaaacaaaaaacaaaacaaaacaaaa--caaaaAAC-CCAT s panTro4.chr19 59847592 77 + 63644993 ccactgcactccagcctgaatgacagagcaagactccatctcaaaaaaacaaaa--------caaaacaaaacaaaa------AAAC-CCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758319 80 + 60714840 tcactgcactccagcctgagtgacagagcaagactccatctcaaaacaaaaaca---------aaaacaaaaacaaa--aaaaaaac-CCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293762 84 - 106955855 ccattgcactccagcctgggtgacagagcaagactccatttcaaaacaaaaaac--------aaaaacaaaaaacaaaCAAAAAAACACCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584916 61 + 64156825 ccactgcactccggcctgggtgacagagcaagactccatgtc----------------------------aaaaaaa--aaaaaaaG-CCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55710736 67 + 59248254 ccactgcactccggcctgggtgacagagcaagactccatgtc-------aaaaa---------------aaaaaaaa--aaaaaaaG-CCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826300 74 + 51301725 ccactgcattccggcctgggtgacagagcaagactccatgtcaaaaaaaaaaaa---------------aaaaaaaa--aaaaaaag-ccat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539511 60 + 50890351 ccactgcactccggcctgggtgacagagcaagactccatgtc-----------------------------aaaaaa--aaaaaaaG-CCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892577 57 + 49145316 ccactgcactccagcctgcgtgacagagcaagactccgtctc--------------------------------aaa--caaaaaaG-CTAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=729774.000000 s hg38.chr19_GL949748v2_alt 907588 198 + 1064304 ACCTGAGTATCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAATCC s panTro4.chr19 59847669 198 + 63644993 ACCTGAGTGTCTTCAAGGACCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758399 198 + 60714840 ACCTGAGTGTCTTCAAGCATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293846 198 - 106955855 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCGCTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCACAGGCTGTTGAGGAAGAACATGGAAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584977 198 + 64156825 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55710803 198 + 59248254 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826374 198 + 51301725 accTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539571 198 + 50890351 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892634 198 + 49145316 ACCTGAGTGTCTTCAAGGATCCAGGTCTTTGTTTTAGAACCCCAAGGAGCTTAATGATGCCACTTT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCCAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGTTGGCAATAGAAAGGCAGAAGGGAGCAGCTCCAGAGGCTGTTGGGGAAGAACATGGAAACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20009129 197 - 122678785 ACCTGAGTATCTTTAGGGGGCCA--TTATTGTTTTAAAACCTCAAAGAGCACCATTATTCCACTCTGCCCTCAAGATATTCTGTCCTAGGTCCAGAGTTTCTAGCCACTGAATGCTGTTGAGAACAGGTGCGAGACCCTGACAACAGGAGGGAGTGATGGAATAGCCATAGAGCCTGTAGGGAAAGAGCACAGAAAACC i canFam3.chr1 C 0 I 1851 a score=395019.000000 s hg38.chr19_GL949748v2_alt 907786 134 + 1064304 ACGCATTCACTGAGCAGGTAg-------------tggctcaagcgtgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggtgttcgagaccagccttgccaacacggtcaaaccccatctctactaaaaa s panTro4.chr19 59847867 134 + 63644993 ACGCATTCACTGAGCAGGTAg-------------tggctcacgcgtgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggtgttcgagaccagccttgccaacacggtcaaaccccatctctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758597 134 + 60714840 ACGCATTCACTGAGCAGgtgg-------------tggctcacgcctgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggggttcgagaccagccttgccaacatggtcaaaccccatctctactaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103294044 134 - 106955855 ACACATTCACTGAGCAGGTAg-------------tggctcacacctgtcatcccaacactttgggaggccaaggcgggtggatcacttgaggccaggggttcgagaccagccttgccaacatggtcaaaccccatctctaataaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585175 147 + 64156825 GTGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctctattaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55711001 147 + 59248254 GTGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctctattaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826572 147 + 51301725 GTGCATTCACTGAGCAGGTAGTGGCCAGatgccatggctcatgtctgtaatcccagcacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaactccatctctattaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539769 147 + 50890351 ATGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctttattaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892832 145 + 49145316 ATGCATTCACTGAGCAGGTAGGggccggatgccgtggctcacgcctgtaatcccagcactttgggaggcggaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctct--taaaaa i calJac3.chr22 C 0 I 29 e canFam3.chr1 20009326 1851 - 122678785 I a score=1029478.000000 s hg38.chr19_GL949748v2_alt 907920 459 + 1064304 tacaaagattaggcagggcgtggggacagacacctgtagccccagca-ccttgggaggccgaggagggtagatcacctgaggtcaggagttcgagaccagccaggccaacatggcaaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgctagctacttgggaggctgaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagcccagattgcgccactgcactccagcctgggcaatagaatgagactccatctcacaaatatataacataaaatgaaaatacaaaaattagccaggtatggtggaaccacctataattccagctactcga------gaggcaggagaatcgcctgaa-cca--ggaggcagaggttgtagttagccaacatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc s panTro4.chr19 59848001 459 + 63644993 tacaaagattaggtagggcgtggggacagacacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcaaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcgccactgcactccagcctgggcaacagaatgagactccatctcacaaatatataacataaaatgaaaatacaaaaattagccaggtatggtggagccacctataattccaggtactcga------gaggcaggagaatcacctgaa-cca--ggaggcagaggttgtagtgagccaacatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758731 458 + 60714840 tacaaagattaggcagggtgtgggggtaggcacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcgaaaccccatctctacaaaaaattagccgtgcatggtggtgtgtgcctttaatgccagctacttgggaggcggaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcgccactgtactccagcctgggcaacagaatgagactccatctcacaaatatataaaataaaatg-aaatacaaaaattagccaggtatgctggcaccacctgtaattccaactactcaa------gaggcaggagaatcgcttgaa-cca--ggaggcagaggttgtagtgagccaagatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 103294178 460 - 106955855 tacaaagattaggcagggcgtggggacaggcacctgtagccccagcattcttgggaggcagaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcgaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttgagcctgggaggcggaggttacggtgagccaagatcacgccactgcactccagcctaggcaatagaatgagactccatctcacaaatatataaaat-aaatgaaaatacaaaaattagccaggtatagtggcgccacctgtaattccaactactcaa------gaggcaggagaatcgcttgaaccca--ggaggcagaggttgtagtgagccaacgtatcatcactgcattccagcttgggtgaaagagtgagacttggtctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585322 462 + 64156825 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccatctctacaaaaaattagccacacatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-acataaaacgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactactcgagaggctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtgagccgacatatcaccactgcactgcagcttgggtggaagagtgagactcggt--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55711148 467 + 59248254 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccgtctctacaaaaaattagccacacatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagaggttgcagtgagtgaagatcatgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-acataaaacgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactgctcgagaggctgaggcaggagaattgcttgaacccaggggaggcagaggttgtagtgagccgagatcacaccactgcactccagcctgggcaacagagtgaaactccatctc i macFas5.chr19 C 0 I 13180 s papAnu2.chr19 47826719 465 + 51301725 tgcaaagatgaGGCAGGGTGTgaaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccatctctacaaaaaattagccacgcatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagagattgcagtgagcgaagatcgtgccactgcactccaggctgggcaacagagtgaaactccatctcataaataaat-ccatacaatgaaaatacaaaaattagccaggtatggtgtagCCACCTGTCATTCCAACTAGTcaagacgctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtgagccaacatatcaccactacactgcagcttgggtggaagagtgagactcggtctc i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47539916 465 + 50890351 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatagtgaaaccccatctctacaaaaaattagccacgcatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcgcttgagcctgggaggcagaggttgcagtgagccaggatcgtgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-ccataaaatgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactactcgagaggctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtcagccaacatatcaccactgcactgcagcttgggtggaagagtgagactcggtctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45892977 29 + 49145316 I a score=330548.000000 s hg38.chr19_GL949748v2_alt 908379 172 + 1064304 aaacaaaacaaaacaaaaaaacaaGCAGCATATTTGCTGGGGCTCCAGTAGTGAGGAAAGGCAGAGGGG-AGTGAGCAGAAGAAATCCTTGTCCTC--AGAGT---TTTTAGT-------GACAGCAGACATCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA s panTro4.chr19 59848460 172 + 63644993 aaacaaaacaaaacaaaaaaacaaGCAGCATATTTGCTGGGGCTCCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCAGAAGAAATCCTTGTCCTC--AGAGT---TTTTAGT-------GACAGCAGACATCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56759195 175 + 60714840 aaacaaaacaaaacaaaaAAACAAGCAGCAtatttgctggggctccagtagtgaggaaatgcagaggggaagtgagcggaagaaatccttgtcctcatagagc---ttttagt-------GACAGCAGACATCTCGATGTGTTCTATTGAAGACAATGGATGATGGCATTAAAATAAACAGGGTA i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 103294638 172 - 106955855 aacaaaaaaaaaaaaaaaaaacaaGCAGCATATTTACTGGGGCTTCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCAGAGCAAATCCTTGTCCTT--AGAGT---TTTTAGT-------GACAGCAGACACCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585784 176 + 64156825 aaaaaaaaaaaaaaaaaaaaaaaaGGAACATTTGTGCTGGGAATCCAGTACTGAGGAAATGCAGAGAGG-AGTGAGATGAAGAAATCCT------C--AGAGTTTATTTTAGTGACAGCAGACAGCAGACATCCGGATGTGTTCTATTGCAGACAATGGATGATGGTATTAAAATAAACAGGGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55724795 171 + 59248254 aaaaaaaaaaaaaaaaaaaaaaaaGCAACATATGTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAAG-AGTGAGATGAAGAAATCCG----CAC--AGAGTTTATTTTAGT-------GACAGCAGACATCCGGATGTGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGATA i macFas5.chr19 I 13180 C 0 s papAnu2.chr19 47827187 158 + 51301725 aaaaaaaaaaaaaaaaaaaaaaaagcaacatatgTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAGG-AGTgagatgaagaaa-------------------tattttagt-------gACAGCAGACATCTGGATGTGTTCTATTGAAGACAATGGATGACGGTATTAAAATAAACAGGATA i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47540381 162 + 50890351 ---------aaaaaaaaaaaaaaaagaaCATTTGTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAGG-AGTGAGATGAAGAAATCCT----CAC--AGAGTTTATTTTAGT-------GACAGCAGACATCCGGATGTGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45892977 29 + 49145316 I a score=691481.000000 s hg38.chr19_GL949748v2_alt 908551 288 + 1064304 GAGGTAAGTCAAACAGAGAGGCATTGATTGGCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAACTGGGGGAGGGAATCTTGTAAATAAAATACtgagctagtgagaaagtagaatgatttatggctcataacttacacgaggatccccca-----taaggccctgtaggccactgtagaagcctttgg------ttttgtttttttt----aaggcagagtttcactcttgttgccaaggctgga s panTro4.chr19 59848632 292 + 63644993 GAGGTAAGTCAAACAGAGAGGCATTGATTAGCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGCAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAACTGGGGGAGGGAATCTTGTAAATAAGATACtgagctagtgagaaagtagaatgatttatggctcataacttacacgaggatccccca-----taaggccctgtaggccactgtaaaagccttTGA------ttttgttttttttttttaaggcagagtttcactcttgttgccaaggctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56759370 281 + 60714840 GAGGTAAGTCAAACACAGAGGCATTG----GCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAATTGGGGGAAGGAATCTTGTAAATAAAATACtgagctagtgagaaagtagaatgattt-tggctcataacttataagaggat--ccca-----taaggccctgtaggccactgtaaaagcctttgg------Atttttttttttt----aaggcagagtttcactcttgttgccaaggctgga i ponAbe2.chr19 C 0 M 381 s nomLeu3.chr10 103294810 282 - 106955855 GAGGTAAGTCAACCAGAGAGGCATTG----GCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAACAAACTGAAGGATGGTAGATCATGAACCAGCATGCAAATAGGGGAAAGGAATCTTGTCAATAAAATACTGAGCTAGTGAAAAAGTAGAATGATTT-TGGCTCATAACTTATAAGAGGAT--CCCA-----TAAGGATCTGTAGACCACTGTAAAAGCCTTCGA------ttttttttttttt---taagacagaggttagctcttgttgccaaggctgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585960 276 + 64156825 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCAGTCATTTAAGTTCTCTC-------------------TGGGAAAGTGATATGAGGGAAAAAACTGAAGGATGTTAGATCATGAACCAGCTTGCTAATTGAGAGAAGGAATCTTGTCAATAAAATACtgagctagtaagaaagtagaatgattt-tggctcataactgataagacgag--acca-----taaggccctgtaggccactgtaaaagccttagA---------tttttttttt----aagac--agtttcgctcttgttgcccaggctgga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55724966 295 + 59248254 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCGGTCATTTAAGTTCTCTCTGGGAAATCTTGTTCTCTTTGGGAAAGTGATAGGAGGAAAAAAACTGAAGGATGTTAGATCGTGAACCAGCTTGCTAATTGAGGGAAGGAATCTTGTCAATAAAATACtgagctagtaagaaagtagaatgattt-tggctcataactgataagacaag--acca-----taaggccctgtaggccactgtaaaagccttagA---------tttttttttt----aagac--agtttcgctcttgttgcccaggctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827345 277 + 51301725 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCAGTCATTTAAGTTCTCTC-------------------TGGGAAAGTGATATGAGGGAAAAAACTGAAGGATGTTAGATCGTGAACCAGCTTGCTAATTGGGGGAAGGAATCttgtaaataaaatactgagCTAGTGAGAAAGTAGAATGATTT-TGGCTCATAACTGGTAAGACGAG--ACCA-----TAAGGCCCTGTAGGCCACTGTAAAagccttaga--------ttttttttttt----aagac--agtttcgctcttattgcccaggctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540543 278 + 50890351 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCGCTGATTTaagttctctc-------------------tgggaaagtgatatgagggaaaaaactgaaggatgttagatcgtgaaccagcttgctaattgggggaagGAATCTTGTAAATAAAATACTGAGCTAGTGAGAAAGTAGAATGATTT-TGGCTCATAACTGATAAGACAAG--ACCA------------CTGTAGGCCACTGTAAAAGCCTTTGAttttttttttttttttttt----aagac--agtttcgctcttgttgcccaggctgga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893006 243 + 49145316 GAGGTAAGTCAACCAGGGCAGCATTG----GCTAGATTTATGCTGGTCATTCAAGTCCTCTT-------------------TGGGAAAGTGATATGAGGAAAAAAACTGAAGAATGGTAGATCATGAACCA----GCTAATCTGGGGAAGGAATTTTGCTAATCAAATACtgagctagtgagaaagtagaataagtt-tggctcataacttacaagaagat--ctcataatgtaaggccctataggccactgtaaaagcctttaa------attttTTT------------------------------------------- i calJac3.chr22 I 29 C 0 e canFam3.chr1 20009326 1851 - 122678785 I a score=106621.000000 s hg38.chr19_GL949748v2_alt 908839 61 + 1064304 gtgcaatggcgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcct s panTro4.chr19 59848924 61 + 63644993 gtgcaatggcgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103295092 61 - 106955855 gtgcaatggcaccatctcggctcactgcaacctctgcctcccaggttcaagtgattctcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586236 61 + 64156825 gtgcaatgacgtgatctcagctcactgcaacttctgcctcccaggttcaaatgattctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725261 61 + 59248254 gtgcaatgacgtgatctcagctcactgcaacttctgcctcccaggttcaaatgattctcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827622 61 + 51301725 gtgcaatgacatgatctcggctcactgcaacttccgcctcccaggttcaagtgattctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540821 61 + 50890351 gtgcaatgacgtgatctcggctcactgcaacttccgcctcccaggttcaagtgattctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893249 24 + 49145316 --------------------------------tccacctctt--gttcaagcaattct--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e ponAbe2.chr19 56759651 381 + 60714840 M a score=895896.000000 s hg38.chr19_GL949748v2_alt 908900 342 + 1064304 gccccagcctcccgagaatctaggattacagTCATAGCTGA---GATTACAGGAACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCC----GTTTGCATTGAGCTTTTGAGTCTTTGGAAATA--AAGGTATCACGGTCTGGCTTGAGGCTTGAAATATTCCTCAGGGGGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------tgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggctaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcacgcctgtaatcccaac s panTro4.chr19 59848985 342 + 63644993 gcctcagcctcccgagaatctaggattacagTCATAGCTGA---GATTACAGGAACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCC----ATTTGCATTGAGCTTTTGAGTCTTTGGAAATA--AAGGTGTCACGGTCTGGCTTGAGGCTTGAAATGTTCCTCAGGGGGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------tgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggctaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcacgcctgtaatcccaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760032 346 + 60714840 GCCCCAGCCTCCCGAGAATCTAGGATTACAGGCATAGCTGA---GATTACAGGCACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATA--AAGGTGTCACGGTCTGGCTTGAGGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------cataatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggccaacatggtgaaaccccgtctttactaaaaatgcaaaaattagctgggtatggtggtgcacacctgtaatcccagc i ponAbe2.chr19 M 381 C 0 s nomLeu3.chr10 103295153 357 - 106955855 gccccagcctcctgagaatctaggattacaggcATAGCTGGGATGATTACAGGCACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCCCTTTATTTGCACTGAGCTTTTGAGTGTTTGGAAATA--AAGGTGTCACAGTCTGGCTTGAAGCTTGAAATGTTCGTCAGGGTGATGGGTTAAG-------AAACTTCAGGAggccaggaacggtggctcatgcctacacgattacaatcccagcattttgggaggctgaggcaggtggatcgcttgaggtcaggagtttgagaccagtctggccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcatgcctgtaatgccaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586297 329 + 64156825 gccccagcctccggagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------cca-cAGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAATTTCAGGAggacaggaacagtggctcatgcc--------tgtaatctcagtactttgggaagctgaggcaggtggatcacttgaggtcaggagttggagaccagcccggccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatgatggtgcacccctgtaatcctagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725322 330 + 59248254 gccccagcctccgcagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCATGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAGGACAGGAAcagtggctcatgcc--------tgtaatcccagtactttgagaggctgaggcagggggatcacttgaggtcaggagttggagaccagcccagccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827683 330 + 51301725 gccccagcctccggagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaggTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAGgacaggaacagtggctcatgcc--------tgtaatcccagtactttgggaagctgaggcaggtggatcacttgaggtcaggagttgcagaccagccccgccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540882 330 + 50890351 gccccagcctccggaaaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGCGATGAGTTAAG-------AAACTTCAGGAggacaggaacagtggctcttgcc--------tgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttggagaccagcccagccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893273 406 + 49145316 gccccagcctcctgagtagctga---------------------gattacagacgcgagctaccacacacagctaatttttgtgttttcagtagagacggggtttcgccatgttggtctggaacccctgaccctcaggtgatccatccCTTTATGTGCACTAAGCTTTTGAGCCTTTGGAACAA--AAGGTGTCATGGTCTGACTTGCCGTTTAGAACGTTCCTCAGGGTGATGGGAGAAGTTTCTTAAAACTTCAGGAggtcaggaatggcggcttatgcc--------tgcaatgccagcactttgggaaggcgaggcttgtggatcacttgaggtcaggaatttgagaccagcctggccaacatggtgaaaccaggtctgtattaaaaatacaaaaagtggccgggcacaatggctcaagcctgtaatcccagc i calJac3.chr22 C 0 I 278 e canFam3.chr1 20009326 1851 - 122678785 I a score=270628.000000 s hg38.chr19_GL949748v2_alt 909242 113 + 1064304 tactcagctcaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcgcaccactgcactccagcctgggtgacaaagcgagactctgtctgaaaaa s panTro4.chr19 59849327 113 + 63644993 tactcagctcaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcgcaccactgcactccagcctgggtgacagagcgagactctgtctgaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760378 113 + 60714840 tactcagctgaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcacaccactgcactccagcctgggtgacagagtgagactctgtctgaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103295510 117 - 106955855 tgcttggctgaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagccaagcaagatggcatcactgcactccagcctgggtaacagagcgagactctgtctgaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586626 113 + 64156825 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagacttcgtctcaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725652 113 + 59248254 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagactccgtctcaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828013 113 + 51301725 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagactccgtctcaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541212 113 + 50890351 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagtgagactccgtctcaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=899236.000000 s hg38.chr19_GL949748v2_alt 909355 373 + 1064304 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTTACTCTACAGCAAAGCTAAGTAGTAATG-AC---GTGCAGATTCTCTTTGCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTTGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTGCATTTTCT--GGGGGTGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCTGATTACTGGATCCCAGCAGAAGCAGC-ATGCTGCTGAAGTCCAGGTCACTGGGGGCCATTGTTATATATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTAGAAGTG s panTro4.chr19 59849440 373 + 63644993 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTTACTCTACAGCAAAGCTAAGTAGTAATG-AC---GTGCAGATTCTCTTTGCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTCCATTTTCT--GGGGGTGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCTGATTACTGGATCCCAGCAGAAGCAGC-ATGCTGCTGAAGTCCAGGTCACTGGGGGCCATTGTTATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTAGAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760491 378 + 60714840 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTGTCTCTACAGCAAAGCTAAGTAGTAATG-ACATTATGCAGATTCTCTTCGCATTAGGATCGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATAAA-----GAGCTCACCATTCCATTTGTGGAGACTTTGCATTTCCTGGGGGGGGGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCCGATTACTGGATCCCAGCAGAAGCAGC-ATGTTGCTGAAGTCCAGGTCACTGGGGGCCATTCTCATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTGGAAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103295627 376 - 106955855 acaaaaaaaGTACCCTGTGTTCTAGTGGTTTTTTTCTTGTCTCTACAGCAAAGCTAAGTAGTAATG-ATATTATGCAGATTCTCTTCACATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAATTGAC--AAAGTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTGCATTTCCT--GGGGGTGGTATCCCACCTGTGGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCACTGCTTCCTGATTCCTGGATCCCAGCAGAAGCAGC-ATGTTGCTGAAGCCCAGGTCCCTGGGGGCCATTCTCATCTATATTTCACTTCTCCAGG---CCCTCTACCTTACTTTGGAAGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586739 372 + 64156825 ag-aaaaaaGTACCCTGTGTTCTGGTG-TTTTTTTCTTGTCTTTACAGCAAAGCTAAGTAATAATG-ACATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGGTGCATCCAAG-GATGCAACCGAC--AAGCTTCGGAGAGAGAAGTGATAAA-----CAGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCT-GGTTTATGAGCTGGGGCAGGCTCACGGCTTCCTGATTACTGGATCCCAGCAGAAGCAGCCATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACTTCTCCAGG---CTCTCTACATGACTTTGGAAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725765 374 + 59248254 ag-aaaaaaGTACCCTGTGTTCTGGTG-TTTTTTTCTTGTCTTTACAGCAAAGCTAAGTAGTAATG-TCATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGGTGCATCCAAG-GATGCAACTGAC--AAGCTTCGGAGAGAGAAGTGATAAA-----CAGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCAcggcttcctgattactggatcccagcagaagcagccatgttcctgaagtccaggtcactgggggccATTCTCACC--TATTTCACTTCTCCAGGCCCCCCTCCACATGACTTTGGAAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828126 365 + 51301725 agaaaaaaagtacccTGTGTTCTcgtgttttttttcttgtctctacAGCGAAGCTAAGTAGTAATG-ACACGATGCAGATTATCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAG-GATGCAACTGAC--AAGCTTCGGAGAGAGA---------------AGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCTGGGTTTATGAGCGGGGGCAGGCTCACGGCTTCCTGATTACTGGATCCCAGCAGAAGCAGCAATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACCTCTCCAGG---CCCTCTACATGACTTTGGAAGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541325 374 + 50890351 agaaaacaaGTACCCTGTGTTCTCGTG-TTTTTTTCTTATCTCTACAGCAAAGCTAAGTAGTAATG-TCATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTGTAGTTGGAAAATAGGTTGCATCCAAG-GATGCAACTTAC--AAACTTCGGAGAGAGAAGTCATAAA-----CAGCTCATTATTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCTATCTCCAGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCACAGCTTCCTGATTACTGGATCCCAGGAGAAGCAGCAATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACTTCTCCAGG---CCCTCTACATGACTTTGGAAGTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20011177 370 - 122678785 AAAACAGAAACACCATACAttttgatg--ttctttctcatttctaca---aggctaggaaagcatgtacatgacccagattcagtttgcattag-------ggttttagttgtaaagcatgttgcatcaataagatgcatttaatggaggcttgtgaaggagaagtgatgtacagcccaGCCCACCATCCCATTGATGGAGCCACTGCATTTCAA--AGGGGCAATATTC-GTCCACAGTCCCCTGGGCAC-CAAGCTGGGGAAGTCTCTGTGTGCCCTGCTCACTAGATCCCAGTAGAAGCAGT-GTTCTCCTGAAGCCTACTCTGCTAGAGGCCATCCCCATCTGTATCCCACTCCTCCAGG---CCCTCAGAATAACCCtgaaagtg i canFam3.chr1 I 1851 I 236 e calJac3.chr22 45893679 278 + 49145316 I a score=798474.000000 s hg38.chr19_GL949748v2_alt 909728 390 + 1064304 CCCACCCACATATATTCAGTTTCTGGAGGGGTTTGATCTTAAAACTGGATCCGAAGTGATACAGTCTGAGATATTGAAAACATAGAAATTggccgggcgtggtggctcacgcctgtaatcccagcactttggaaggccaaggcgggcagatca--tgaggtcaggagatcgagaccatcctggctaacactgtgaaaccc-atctctactaaaaatacaaaaaaaattagccaggcacggtggcgggcatctgtagtcccagctactcaggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtaagccgagatcgcgccactgcactccagcctgggcaactagaacgaggctccgtctc----a-------aaaaaaaaaaaaaaaa s panTro4.chr19 59849813 388 + 63644993 CCCACCCACATATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCGAAGTGATACAGTCTGAGATATTGAAAACATAGAAATTggccaggcgtggtggctcacgcctgtaatcccagcactttggaaggccaaggcgggcagatca--tgaggtcaggagattgagaccatcctggctaacactgtgaaaccccatctctactaaaaatacaaaaaaaattagccaggcacggtggcgggcgtctgtagtcccagctactcaggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtgagccgagatcacgccactgcactccagcctgggcaactagaacgaggctccgtctc----a-------aaacaaaaaaaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760869 384 + 60714840 CCCACCCACCTGTATTCAGTTTCTGGAGGGGTTTACTCTTAAAACTGCATCCAAAGTGAT--AGTCTGAGATACTGAAAACATAGAAATTggccgggcgtggtggcccacgcctgtaatcccagcactttgggaggccgaggcaggcagatca--tgaggtcaggagatcgagaccatcctggctaacactgtgaaaccccatctcttctaaaaatacaaaaaaaattagccgggcatggtggcgggcgtctgtagtcccagctactcgggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaactagagcgaggctccatctc----a-------aaaaaaataaa----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296003 351 - 106955855 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTGAAACTGCATTCA--------------------------------------gctgggcgtggtggctcatgcctataatcccagcactttgggaggctgaagcaggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggggaaaccccgtctctactaaaaatac----agaattagccgggcatggtggcacatgcctgtaatcccagctactagggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcggtgagccgagatcgtgccattgcactccagcctgggcaacaaaagtgaaactccttctc----a-------aaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 I 302 s rheMac3.chr19 60587111 392 + 64156825 ACCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATACTGAAAACATAGAAATTgaccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccaagacaggcggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtcccagctacccaggaggctgaggcaggagaatctcttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatgtcaaataaataaataaataaata------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726139 388 + 59248254 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATACTGAAAACATAGAAATTgaccgggcgtggtggctcacgcctgtaatctcagcactttgggaggccaagacaggcggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtcccagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatgtc----aaaaaaataaataaata------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828491 380 + 51301725 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATATtgaaaacatagaaattgaccgggtgcagtggcttacacctgtaattccagcactttgggaggccgagacaggcggatca--tgaggtcaggagatcaacaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtccaagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatatc------------aaataaata------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541699 382 + 50890351 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATGCAGTCTGAGATAGTGAAAACATAGAAATTgaccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattaactgggtgtggtggcgggcatctatagtcccagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcacgccattgcactccagcctgggcaactagagcgagactctgtgtc----a-------aaaaaaaaa------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20011547 236 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=292195.000000 s hg38.chr19_GL949748v2_alt 910118 131 + 1064304 aagaaaaCATAGAAATTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaggtgggaggattccttgagcaccagaatt s panTro4.chr19 59850201 129 + 63644993 --gaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcacgcctgtaatcctagcacactgggaggctgaggtgggaggattccttgagcaccagaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761253 129 + 60714840 --gaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAACGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaggtgggaggattccttgagcaccagaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296656 131 - 106955855 aagaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcatgcctgtaatcctagcacgttgggaggccgaggtgggaggattctttgagcaccagagtt i nomLeu3.chr10 I 302 C 0 s rheMac3.chr19 60587503 129 + 64156825 --aataaaACAGAAATTAAGGATTTCCAGATTTTGAAAAACTTTAAAAACGAggccgggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggattccttgagtctccgagtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726527 129 + 59248254 --aataaaacagaaaTTAAGGATTTCCAGATTTTGAAAAACTTTAAAAACGAggccgggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggattccttgagtctccgagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828871 128 + 51301725 --aataaaacagaaattaaggATTTCCAGattttgaaaaactttaaaaacgaggccaggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggatt-cttGAGTCTccgagtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542081 129 + 50890351 --aagaaaacaaaaaTTAAGGATTTCCAGATTTCAAAAAACTTTAAAAACGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaagtgggaggattccttgagtctccgagtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20011547 236 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=577089.000000 s hg38.chr19_GL949748v2_alt 910249 214 + 1064304 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttacctggccatggtaatacatgcctgtagagccagctactcaggaggctgaggtgggagaaccgatcaagcctggaagaccgaagccgcagtgagccgtaatca--------ccccactgcactccaggctgggggacagagcaagaccctgtctc--------------aaaaaaagaaagaaag s panTro4.chr19 59850330 214 + 63644993 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttacctggccatggtaatacatgcctgtagagccagctactctggaggctgagttgggaggcccgatcaagcctggaagaccgaagccgcagtgagccgtaatca--------ccccactgcactccaccctgggggacagagcaagaccctgtctc--------------aaaaaaagaaagaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761382 214 + 60714840 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttagctggccatggtaatacatgcctgtagacccagctactcaggaggctgaggtgggaggaccaatcaagcctggaagagtgaagccgcagtgagctgtgatca--------ccccactgcgctccagcctgggggacagagcaagaccctgtctc--------------aaagaaagaaaggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296787 214 - 106955855 caaaaccagcccgggaaagatgac--aagaccccatctctacagaaaacagttagctggccatggtaacacatgcctgtagacccagctgctcaggaggctgaggtgggagggccgaacaagcccggaagactgaagccacagtgagccgtgatca--------ccccactgcactccagcttgggggacagagcaagaccctgtctc--------------aaagaaagaaaggaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60587632 224 + 64156825 caaaaccagcctggaaaagatgac--aagacctcttctctacagaaaaaagttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccaatcaagcatggaagactgaagccgcagtgagccgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc----aaaaaaaaaaaaaaaaagaaagaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726656 222 + 59248254 caaaaccagcctggaaaagatgac--aagacctcatctctacagaaaaaagttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccgatcaagtctggaagactgaagccgcagtgagccgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc------aaaaaaaaaaaaaaagaaagaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828999 225 + 51301725 caaaaccagcctggaaaagatgac--aagacctcatctctacagaaaaaagttAGCTGGCCATGGtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggactgatcAAGCCTGGAAGACTGaagccgcagtgagctgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc---aaaaaaaaaaaaaaaaaggaaagaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542210 207 + 50890351 caaaaccagcctggaaaaga-------------------------------ttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccgatcaagcctggaagactgaagccacagtgagccgtgatcacaccactgcaccactgcactccagcctgggggacagagcaagatcctgtctcaaaaaaaaaaaaaaaaaaaaagaaagaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893957 205 + 49145316 caaaaccaacctgggaaagatgatcagagacctcatctctacacaaaaatgttagctggccatggtaatccatacctatagtcccagctactcaggaagctgaggtgggaagacccattaagcctggaaggttgaagctgcagtgagtcgtgatca--------caccacagtgccccagcctggggaacagagcaagaccctatctc-------------------------gaaaa i calJac3.chr22 I 278 C 0 e canFam3.chr1 20011547 236 - 122678785 I a score=918616.000000 s hg38.chr19_GL949748v2_alt 910463 277 + 1064304 aagaaaaagaaaaTCGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAATGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGATACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTACAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC s panTro4.chr19 59850544 277 + 63644993 aagaaaaagaaaaTCGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGACACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTACAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACACCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761596 277 + 60714840 aagaaaaagaaaaTCACCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGATATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297001 273 - 106955855 ----aaaagaaaaTCGTCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTGTGTGAGGCCGCAGGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTGCGGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60587856 276 + 64156825 aaGAAAAAGGAAATTGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAAGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTA-CCGTCTGGCTAATGCCCTGTGACGTA---GTTATTTCCAGCACTGTATACCTTCCAC i rheMac3.chr19 C 0 I 703 s macFas5.chr19 55726878 276 + 59248254 aagaaaAAGGAAATTGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAAGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTA-CCGTCTGGCTAATGCCCTGTGACGTA---GTTATTTCCAGCACTGTATACCTTCCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829224 277 + 51301725 aagaaaaaggaaatcgcCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGCAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGCAACCTGCAGGATAATCAAAGGAGGAGAAGCCTGTTATCCCTCTGGCTAATGCCCTGTGATGTA---GTTATTTCCAGCACTGTATACCTTCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542417 274 + 50890351 aagaaaaagaaaaTCACCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCACGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTATCCGTCTGCCTAATGCCCTGTGAC------GTTATTTCCAGCACTGTATACCTTCCAC i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45894162 280 + 49145316 agagaaaaaaaaGTCACCTACCGTAAGTGTTTTAGGTTACAGTCTGGATTCTCTAACGCCTTGCAGAGAATCCACAATCCACACCCTATGTGGTTGAGGCTCAAGTCCAAGTCTGTGAGGCTGCAGACTCCTTGGAGAACCTTCGAGATAGGTCTGCAGCCACGCTTGGTTATGTTGCATTGCTGTAACCTGCAGGATCATCACATGAAGAGAGGCCTGTTATCCCTCGGACTTATGCCCTGCGAAGTGGCTGTCACTCCCAGCACCATATATCTTCCGC i calJac3.chr22 C 0 I 3 s canFam3.chr1 20011783 263 - 122678785 AAAATGAGCAAAAGTACCTACCCTAGACATCTTAGGTTACAATTTGGCTTCTTCAAGGCCTTGCAGAGAAACCATGATCTGGTACCTATAGGATTGAGACCCAGATCCAAGTTTGTTATGCTGGAATCTTCTTTAAGAAGCTTTAAGATGTGTCTGTAGACACATCTGGTTATGTTGCAGTGTGATAATCTGCA-------------AAGACAATCCCGTTC-ATCTCTGGCTTACACCCTGTAAGATG---GTTACTTCCAACAGCACACACCTTCTAC i canFam3.chr1 I 236 C 0 a score=294.000000 s hg38.chr19_GL949748v2_alt 910740 1 + 1064304 T s panTro4.chr19 59850821 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761873 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297274 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727154 1 + 59248254 C i macFas5.chr19 C 0 C 0 s canFam3.chr1 20012046 1 - 122678785 T i canFam3.chr1 C 0 I 23589 e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e rheMac3.chr19 60588132 703 + 64156825 I a score=910.000000 s hg38.chr19_GL949748v2_alt 910741 1 + 1064304 T s panTro4.chr19 59850822 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761874 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297275 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727155 1 + 59248254 T i macFas5.chr19 C 0 I 1 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e rheMac3.chr19 60588132 703 + 64156825 I a score=63774.000000 s hg38.chr19_GL949748v2_alt 910742 118 + 1064304 ATATActggaatgcagtgctgcactcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgcccgccaccTATA s panTro4.chr19 59850823 118 + 63644993 ATATActggaatgcagtgctgcactcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgcccgccaccTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761875 118 + 60714840 ATATActggaatgcagtgctgcaatcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgagatgatagttgcctgccaccTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297276 118 - 106955855 ATATAccggaatgcagtgctgcaatcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgactgccaccTATA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e macFas5.chr19 55727156 1 + 59248254 I e rheMac3.chr19 60588132 703 + 64156825 I a score=251041.000000 s hg38.chr19_GL949748v2_alt 910860 218 + 1064304 taaccagacttggtggtgcacgcctgtagtgccagctac-tcagaagactgaggcaggagaatcgcttgaatccgggaggcagaggctgcagtgagctgagatcgcgccactgcactccagcccgggcgacagagcgagactccgtctcaagaaaacaacaa--------caaca-acaaaaaGTATTTATATAAAACATAGGTGGCAGGTAGGAATTGACCCATGAA s panTro4.chr19 59850941 218 + 63644993 taaccagacttggtggtgcgcgcctgtagtgccagctac-tcagaagactgaggcaggagaatcgcttgaatccgggaggcagaggctgcagtgagctgagatcgtgccatggcactccagcccgggcgacagagcgagactccgtctcaagaaaaaaacaa--------caaca-aaaaaaaGTATTTATATAAAACATAGGTGGCAGGTAGGAATTGACCCATGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761993 214 + 60714840 taaccaggcttggtggtgcacgcctgtaataccagctac-tcagaaggctgaggcaggagaatcgcttgaatctgggaggcagaggctgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagcaagactccgtctcaagaaaa----aa--------caaca-acaaaaaGTATTTATAAAAAACACAGGTGGCAGGTAGGAATTGACCCATGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297394 218 - 106955855 taaccaggcttggtggcgcgcacctgtagtaccagctac-tcagaaggctgaggcaggacaatcgcttgaatccaggaggcagaggctgcagtaagctgagatcacgccactgcactccagccggggcgacagagtgagactccgtctcaagaaaaaaacaa--------caaca-aaaaaaaGTATTTATAAAAAACATAGGTGGCAGGCAGCAATTGACCCATGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3519994 225 - 59248254 taaccaggcttggtggtgcgtgcctgtagtaccagctac-tcagaaggctgaggtaggagaatcgcttgaatcc-ggaggcagaggctgcagtgagctgagatcgcaccaccgcactccaacctgggcaacagagcgagactccgtctcaagaaaaaaataaaaaaaaCTCAACCAAAAAACCTTATTTATA-AAAACATAGGTGGCAGGTTGGAATTGACCCATGAA i macFas5.chr19 n 1 C 0 s papAnu2.chr19 3470877 224 - 51301725 taaccaggcttggttgTGCgtgtctgtagtaccagctacttcagaaggctgaggtaggagaatcgcttgaatcc-ggaggcagaggctgcagtgagctgagatcgcaccaccgcactccagcctgggcaacagagcgagactccgtctcaagaaaaaaataaaaaaaactcaaCC-AAAAACCTTATTTAT--AAAACCTAGGTAGCAGGTTGGAATTGACCCATGAA i papAnu2.chr19 n 0 T 54731 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=-1182.000000 s hg38.chr19_GL949748v2_alt 911078 3 + 1064304 -CTG s panTro4.chr19 59851159 3 + 63644993 -CTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56762207 3 + 60714840 -CTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297612 3 - 106955855 -CTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3520219 2 - 59248254 -TT- i macFas5.chr19 C 0 T 51553 s papAnu2.chr19 47829501 3 + 51301725 CTT- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=372757.000000 s hg38.chr19_GL949748v2_alt 911081 180 + 1064304 GAGCTATATACTTCCAGGTGGGCTTGCACAT-AAAAGCATGCAAATGggccgggcacagtggctcacgcctataatcacagca--gtgggaggccaagacgggcagatcatttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatC s panTro4.chr19 59851162 180 + 63644993 GAGCTATATACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGgaccgggcacagtggctcatgcctataatcacagca--gtgggaggccaagacgggcagatcatttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56762210 179 + 60714840 GAGCTATACATTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGggcccagcacagtggctcacgcctataatcacagca--gtgggaggccaagatgggcagatcacttgaggtcaggagttcaagaccagcctggcaaacatggtgaaaccccatctctact-------aaaaatacaaaaatC i ponAbe2.chr19 C 0 I 1170 s nomLeu3.chr10 103297615 180 - 106955855 GAGCTATATACTTCCAGGTGGACCTGTACAT-AAAAGCATGCAAATGggccgggcacagtggctcacgcctataatcacagca--gtgggaggccaagacgggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727157 186 + 59248254 GAGCTGTCTACTTGCAGGTGGGCTTGTACATAAAAAGCATGCAAAT-ggcccagtgcagtggctcatgcctataatcccagca--gtgggaggccgagacgggtagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatttctacttaaaaaaaaaaatacaaaaata i macFas5.chr19 I 1 I 8 s papAnu2.chr19 47829504 182 + 51301725 GAGCTATCTACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAaat-ggcccagtgcagtggcttatgcctataatcccagca--gtgggaggccgagacgggtagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaat-ccatctttacttaaaaaaaaaaaaaaaaaaa-- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47542694 180 + 50890351 GAGCTATCTACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGggcccagcacagtggctcatgcctataatcccagca--gtgggaggccga---ggtcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatttctacttaaaaaaaaaaa---aaaaata i chlSab2.chr6 I 3 I 8 s calJac3.chr22 45894445 179 + 49145316 GAGCTATATACTTCCAGGCGGGCTTGCACAT-TAAAGCATGCGAATGggccaggcgcggtggctcatgcctgtaatcccagcactgtgggaggcagagaggggcagatcacttga-gtcagtagttcaagaccagcctggccaacatggtgaaacctcgtctctacc-------aaaaatacaaaaat- i calJac3.chr22 I 3 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e rheMac3.chr19 60588132 703 + 64156825 I a score=66477.000000 s hg38.chr19_GL949748v2_alt 911261 46 + 1064304 Gggccgggcgcggtggctcaaacctgtaatctcagcactttgggag s panTro4.chr19 59851342 46 + 63644993 Gggccaggcgcggtggctcaaacctgtaatctcagcactttgggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297795 46 - 106955855 gggccgggcgcactggctcaagcctgtaatctcagcacttacgcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727351 46 + 59248254 ggtccagacacagtggctcaagcctgtaatcccagcactttgggag i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47829689 46 + 51301725 ggtccagacacagtggctcaagcctgtaatcccagcgctttgggag i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47542882 46 + 50890351 ggtccagacacagtggctcaagcctgtaatcccagcactttgggag i chlSab2.chr6 I 8 I 298 s calJac3.chr22 45894624 46 + 49145316 gagccgggcatggtggcgcgtgcctgtaatcccagctactcaggag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e rheMac3.chr19 60588132 703 + 64156825 I a score=15286.000000 s hg38.chr19_GL949748v2_alt 911307 19 + 1064304 accaaggtgggtgaatcac s panTro4.chr19 59851388 19 + 63644993 accaaggtgggtgaatcac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297841 19 - 106955855 accaaggtgggtgaatcac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727397 19 + 59248254 gctgagacaggcagatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829735 19 + 51301725 gctgaggcaggcagatcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45894670 19 + 49145316 gctgaagcaggagaattgc i calJac3.chr22 C 0 I 521 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=46618.000000 s hg38.chr19_GL949748v2_alt 911326 67 + 1064304 --aagatcaggagttcaagaccagcctggccaaagtggtgaaaccccatctttactaaataca-aaaatt s panTro4.chr19 59851407 67 + 63644993 --gagatcaggagttcaagaccagcctggccaaagtggtgaaaccccatctttactaaataca-aaaatt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297860 67 - 106955855 --gagatcaggagttcaagaccagcctggccaaagtggtgagaccccatctttactaaataca-aaaatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727416 70 + 59248254 ctgaggtcgggagttcgagaccagcctgaccgacatggagaaattccgtctccactaaaaatacaaaatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829754 70 + 51301725 ctgaggtcgggagttcaagaccagcctgaccgacatggagaaattccgtatctactaaaaatacaaaatt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=46885.000000 s hg38.chr19_GL949748v2_alt 911393 146 + 1064304 agctgggcacgatggctcacacctgtaatctcagcactttgggaggctgaggcagacagatcacctgaggtcgggagttcaaga-------------------------------ccagcctaagcaatatg-gagaaa-cccgtctctactaaaa------------------------------------------------------------------atac---aaaattagccaggtgtggt s panTro4.chr19 59851474 146 + 63644993 agctgggcacgatggctcacacctctaatctcagcactttgggaggctgaggcagatggatcacctgaggtcgggagttcaaga-------------------------------ccagcctaagcaatatg-gagaaa-cccatctctactaaaa------------------------------------------------------------------atac---aaaattagccgggtgtggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297927 147 - 106955855 agctgggcacaatggctcacacctgtaatctcagcactttgggaggctgaggcagatggatcacctgaggtcgggagttcgaga-------------------------------ccagcctaagcaacatg-gagaaaccccgtctctactaaaa------------------------------------------------------------------atac---aaaattagccgggtgtggt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47829824 248 + 51301725 agctgggtgtggtggcccatgcctgtaatcccagctactcgggggtctgaggcaagagaattgcttgaacttgggagatgaaggttgcggtaagcagagatcgcgccattgcactccagcctgggcaccaagagtgaaattctgtttcaaaaaaaaaaaaaaaaaaatatatatatatatatatatacacacacacacacacacagagacacacatatacatatacacaaaaattagccgggtgtggt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=32208.000000 s hg38.chr19_GL949748v2_alt 911539 144 + 1064304 ggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaactggggagacggaggttgtggtgagcagagattgcaccattgcactccagcctgggcaaga---gcgaaactccatctcaaaaaaaaaaaa s panTro4.chr19 59851620 147 + 63644993 ggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaactggggagacggaggttgcagtgagcagagattgcaccattgcactccagcctgggcaagaagagcgaaactccatctcaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47830072 144 + 51301725 ggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagattgcaccactgcattccagcctgggtgaca---gtgagactccatgcaaaaaaaaaaaaa i papAnu2.chr19 C 0 T 165 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e nomLeu3.chr10 103298074 0 - 106955855 C e chlSab2.chr6 47542928 298 + 50890351 I e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=1719.000000 s hg38.chr19_GL949748v2_alt 911683 18 + 1064304 aaattagccaggtgtggc s panTro4.chr19 59851767 18 + 63644993 aaattagccaggtgtggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e nomLeu3.chr10 103298074 0 - 106955855 C e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=76880.000000 s hg38.chr19_GL949748v2_alt 911701 302 + 1064304 ggcccatgcctgtaatcctagctactcaggaggctgaggtaggag----aattacttgaacccaggaagcggaggttgcagtgagccaagatcgcaccactgcactccagcctggtgacagagagagactg---ttaaaaaaaaaaaaaaaa--CATCCAAATGGCCTTCTGATTCCATCCATTTCCAGCTCTGCCTGGGACaacagcttaggctctgggttcagaccgacccaggacaggatctgagccctgggtcacttattttctgcgtgGTTAGATTATGGAAATTTCACTTTCCCTGTCATTTTAT s panTro4.chr19 59851785 307 + 63644993 ggcccatgcctgtaatcctagctactcaggaggctgacgtaggag----aattacttgaacccaggaagcggaggttgcagtgagccaagatcgcaccactgcactccagcctggtgacagagagagactcagtttaaaaaaaaaaaaaaaaaTCATCCAAATGGCCTTCTGATTCCATCCATTTCCAGCTCTGCCTGGGACaacagcttaggctctgggttcagaccgacccaggacaggatctgagccctgggtcacttattttctgcgtgGTTAGATTATGGAAATTTCACTTTCCCTGTCATTTTAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298074 308 - 106955855 ggcccatgcctgtaatcctagctactcaggaggctgaggtaggagaattaattacttgaacccaggaagcagaggctgcagtgagccaagatcacaccactgcactccagcctggtgacagagagactcag---ttagaaaaaaaaaaaaaaaTCATCCAAATGGCCTTCTGATTACATCCATTTCCAGCTCTGCCTGGGACAATATCTTAGGCTCTGGGTTTAGACCGACCCAGGACAGGATCTGAGACCTGGATCAGTTATTTTCTGCACGGTTAGATTATGGAAATTTCACTTCCCTTGTCATTTTAT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=49139.000000 s hg38.chr19_GL949748v2_alt 912003 128 + 1064304 TTCATGTTTAAGttttgtctttaactgacacattctacatatataggggtatagtgtgatgttttggtgcaggta--------cac------ttcgtataacgatcaGGTAGGTGACTGTT--------------------TGTTTAACAATAGTTATTCTA s panTro4.chr19 59852092 128 + 63644993 TTCATGTTTAAGttttgtctttaactgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------ttcgtataatgatcGGGTAGGTGACTGTT--------------------TGTTTAACAATAGTTATTCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298382 124 - 106955855 TTCACGTTTAGGttttgtctttaattgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------atcatataacaatcaGGCAGGTGAC------------------------TGTTTAACAATAGTTATTCTA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45895210 158 + 49145316 TTCATGTTTAGGttttgtctttaaatgacacattctatatatttcggagcacagtgtgatgtttcggtgcacgtatcatgtatcacctgataattgtataattatcaagtaagTGACTTTTTTTTCTTTTTTTTTGTTTGCTGTTTAACAA----TACTCTA i calJac3.chr22 I 521 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=73418.000000 s hg38.chr19_GL949748v2_alt 912131 127 + 1064304 Agccaggcacagtggctcatgcctggaacgccagcactttgggaggccgaggcaggcagatcacttaaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaacctcatctccactaaaagtg s panTro4.chr19 59852220 126 + 63644993 Agccaggcacagtggctcatgcctg-aacgccagcactttgggaggccgaggcaggcagatcacctaaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaacctcatctctactaaaagtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298506 127 - 106955855 Agccaggcacagtggctcatgcctggaaccccagcactttgggaggccgaggcagacagaacacctgaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccccatctctactaaaagta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727486 159 + 59248254 agctgggtgtggtggcccatgcctgtaatcccagctcctcgggggtctgaggcaggtgaatcacttgaacttgggagacgaaggttgcggtaagcagagattgcgccattgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaa i macFas5.chr19 C 0 I 69 s calJac3.chr22 45895368 126 + 49145316 Agcggggcgtggtggctcacgcctgtaatcccagcactttgggtggccgaggcaggtggatcacataaggtcaggagtttgaga-------------------------------ccagcctggccagtatg-gtgaaacttcatctctactaaagta- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e rheMac3.chr19 60588132 703 + 64156825 I a score=211373.000000 s hg38.chr19_GL949748v2_alt 912258 129 + 1064304 caaaaattagccagg-catggtggagggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtcagccaagattacaccactgcattccagtc s panTro4.chr19 59852346 130 + 63644993 caaaaattagccggggcatggtggagagcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtcagccaagattacaccactgcattccagtc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298633 129 - 106955855 caaaaattagccagg-catggtggagggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcggtgagccgagattacaccactgcactccagtc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727714 129 + 59248254 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagatcacaccactgcattccagcc i macFas5.chr19 I 69 C 0 s papAnu2.chr19 47830051 129 + 51301725 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagattgcaccactgcattccagcc i papAnu2.chr19 T 165 C 0 s chlSab2.chr6 47543226 129 + 50890351 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagatcacaccactgcattccagcc i chlSab2.chr6 I 298 C 0 s calJac3.chr22 45895494 129 + 49145316 caaaaattagctggg-cgtggcggcaggcacctagaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagattgcaccactgcattccagcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e rheMac3.chr19 60588132 703 + 64156825 I a score=43594.000000 s hg38.chr19_GL949748v2_alt 912387 25 + 1064304 tgggcgacagagtgagacttcatcc s panTro4.chr19 59852476 25 + 63644993 tgggcgacagagtgagacttcatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298762 25 - 106955855 tgggcgacagagtgagacttcatcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60588835 25 + 64156825 tgggggacagggtgagactccgtcc i rheMac3.chr19 I 703 C 0 s macFas5.chr19 55727843 25 + 59248254 tgggtgacagagtgagactccatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830180 23 + 51301725 tgggtgaca--gtgagactccatgc i papAnu2.chr19 C 0 I 256 s chlSab2.chr6 47543355 25 + 50890351 tgggtgacagagtgagactccacgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895623 24 + 49145316 -tggcagcagagtgagactgtcttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I a score=526161.000000 s hg38.chr19_GL949748v2_alt 912412 265 + 1064304 aaaaaaaaaa---aaaTGAATCTCAGAAATGACCACTAGCTAGAATTTCTGAACAGGAACAGGTCTTCAACCCTATGCAATCTCTTGAATATTTTTCTAACCATAATTTTAATGTGAACAGGTAGCTCACGCTGGGCTTCTTTCCATATAACAAGATTCAGCCAACTATAGTTCGTGGGTCAATTCCAACCTGCCACCTATGTCTTTTACAAATAAGGAttttt-gttgagtttttttt---tgtttttttcttgagacggagtctcactct s panTro4.chr19 59852501 271 + 63644993 aaaaaaaaaagaaaaaTGAATCTCAGAAATGACCACTAGCTAGAATTTCTGAACAGGAGTATGTCTTCAACCCTATGCAATCTCTTGAATATTTTTCTAACCATAATTTTAATGTGAACAGGTAGCTCACGCTGGGCTTCTTTCCATATAACAAGATTCAGCCAACTATAGTTCGTGGGTCAATTCCAACCTGCCACCTATGTCTTTTATAAATAAGGATTTTT-GTTGAGttttttttgtttgtttttttcttgagacggagtctcactct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298787 263 - 106955855 aaaaaaagaa---aaaagaaTCTCATAAATGAACACTAGCTAGAATTTCTGAACAGGAATAGGTCTTCAACCCTATGCAATCTCTTGAATATTGTTCTAACCATAATTTTAATGTGAACAGGCAACTCATGCTGGGCTTCTTTCCTTATAACAAGATTCAGCCAACCACAGTCCATGGGTCAATTCCAACCTGCCACCTATGTTTTTTATAAATAAGGAttttt-gttgagtttttttt-----tttttttcttgagacagagtctcactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60588860 263 + 64156825 -aaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCAACCCTACGTAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTAACTCAGGCCGGGCTTCTACCCATGTAACAAGATTCAGCCAACAACAATTCATGGGTCAATTCCAACCTGCCACCTATGT-TTTTATAAATAAGGTTTTTTGGTTGAGtttttttt----atttttttcttgagacggagtctcgctct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55727868 263 + 59248254 -aaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCGACCCTACGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGATAACTCAGGCCGGGCTTCTACCCATGTAACAAGATTCAGCCAACAACAATTCATGGGTCAATTCCAACCTGCCACCTATGT-TTTTATAAATAAGGTTTTTTGGTTGAGtttttttt----atttttttcttgagacggagtctcgctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830459 259 + 51301725 ---aaaaaaa---aaaaaatactcagaaatgAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCGACCCTATGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTAACTCAGGCTGAGCTTCTTCCCATGTAACAAGATTCAGCCAACAACAGTTCATGGGTCAATTCCAACCTGCTACCTA-GG-TTTTATAAATAAGG-TTTTTGGttgagtttttttt----atttttttcttgagacggagtctcgctct i papAnu2.chr19 I 256 C 0 s chlSab2.chr6 47543380 264 + 50890351 aaaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCAAACAGGAATAGGTCTTCAACCCTATGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTACCTCAGGCTGGGCTTCTTCCCACGTAACAAGATTCAGCCAACTACAGTTCGTGGGTCAATTCCAACCTGCCACCTAGGT-TTTTATAAATAAGGTTTTTTGGTTGCGtttttttt----atttttttcttgagacagagtctcgctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895647 225 + 49145316 ---aaaaaga---aaaagaaTCTCAGAAATGAACACTAGCTAGAATTTCTGAACAGGAATAGGTCTTCAACCCTATGCAAACTCTTGAATGTTGTTCTAACCATGATTTCAATGTGAACAGGTAGCACACACTGAGCTGCTTCCCACATAACAAGATTCAGCCAGCAACAATTCATGGGCCAATTCCAGCCTGACACCTGTG-----------------------------------------Gtttctttcttcaggtggaatctcactaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I a score=2024382.000000 s hg38.chr19_GL949748v2_alt 912677 739 + 1064304 gtcgcccgggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccagattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcgatgggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaataaaaGTTTA-AAAAAAGGTGCCACTGGCCCTACCACATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACACACACAAAGCATCAGATCCGAGAACCAACTACTCATCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------gtttctttgtttttttgagaaggagtcttgttctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgccttccaggttcacgccattctcctgtctcatcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc s panTro4.chr19 59852772 744 + 63644993 gtcgcccaggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccggattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcgacgggttttcaccatgttggccaggctggtcttgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaataaaaGTTTA-AAAAAAGGTGCCACTGGCCCTACCACATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACACACACAAAGCATCAGATCCGAGAACCAACTACTCACCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGCATCTGCCTGGTttttttttttgtttgtttctttgtttttttgagaaggagtcttgttctgtcgcccaggctggagtgcagtggtgca--ctcagctcactgcaacctccgccttccaggttcatgccattctcctgtctcatcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56763559 735 + 60714840 gtcacccaggctggagtgcgtaggcgccatctcagctctctgcagcctttgcctgccagattcaagcgatt-tcctacctcagccttctg-agtagctggtactat-aggggagcaccaccaagcctggttaatttttgtattttttagtagcgacaggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaatagaaGTTTA-AAAAAAGGTGTCACTGGCCCTACCATATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACATACACAAAGCATCAGATCCGAGAACCAACTGCTCATCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------gtttgtttatttgtttg---aggagtctcgctctgttgcccaggctggagtgcagcggtgcgatctcggctcactgcaacctccgccttccaggttcacgccattctcctgtctcagcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgttgggattacaggcgtgagc i ponAbe2.chr19 I 1170 C 0 s nomLeu3.chr10 103299050 734 - 106955855 gtcacccaggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccggattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcaacgggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcactacctgttccccaataacctatggaaataaaaTTTT--TCAAAAGGTGTCACTGGCCCTACCATATAACTCAACCTACCTTGAATAGCAGGCGGTACCATGTCATAGGAATTTGAAAGAACACACACAAAGCATCTGATCCAAGAACCAACTGCTTATCTCAAATCTTCCTTCATGGCAGGAAGAAGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------g----tttgtttttttgagaagaagtcttgctctgttgcccaggctggagggcagtggcgcgatctcggctcactgcaacttccgccttccaggttcatgccattctcctgtctcagcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60589123 730 + 64156825 gttgcccaggttggagtacggtggcgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccATTcaccacctgttccctaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTGGCCCTACCATGTAACTTAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAGCAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacagagtctcgctctgtcacccaggctggagtgcagtggtgagatcttggcttgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccaccaccatgcctggctaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtcttggtctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55728131 730 + 59248254 gttgcccaggttggagtgcggtggtgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccATTcaccacctgttccccaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTGGCCCTACCATGTAACTTAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAGCAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacagaatctcgctctgtcacccaggctggagtgcagtggtgagatcttggcttgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccactaccatgcctggctaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830718 731 + 51301725 gttgcccaggctggagtgcggtggtgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctgaagtagctggtactac-agacacGCAcaaccaagcctggttaatttttttattttttagtagagatgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccattcaccacctgttccccaataacctatggaaataaaaatttt-acaaaaggtGTCACTGGCCCTACCATATAACTCAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAatttgaaagaacacacacaaagcatCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAACAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATctgcctg----ttttt-------g----ttgttgtttttgagacggagtctcgctctgtcacccaagctggagtgcagtggtgagatcttggctcgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccaccaccatgcccggctaatttttggtaattttagtggatacggggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47543644 730 + 50890351 attgcccaggttggagtgcggtggcgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggctgggttggtctcgaaccc--------taggtgatttaccagccATTcaccacctgtttcccaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTAGCCCCACCCTATAACTCAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATTTCAAATCTTCCTTCATAACAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacggagtctcgctctgtcacccaggctggagtgcagtggtgagatcttggctcactgcaccctccgccttctgggttcacgccattctcctgcctcagcctctcaagtagctgggactacaggtacccaccaccatgcccaggtaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895872 684 + 49145316 atcg-ccaggctggagtgcagtggcacgatctcagctccctgcaacctctgcctcccagatctaagtgattctcctgcctcagcctcccg-agtagctggtactacaaggcttgccccaccacgccaggctaatttttata-tttttagtagagagggggtttcac---attggccaggctggtctcgaaccccttgaccttaggtgatctgcccaccATTCACCACCCGTTCTCCAATAATGTGTGGAAATAAAAATTTTAAAAAAAGATGTCACTGGCCCTACCACATAACTCAATCTACCTCTGATAGCAGAGAGTAC--TGTCATGTGAATTTGAAAGAACATCCACAAAGCATCAGATCCAAGAATGAATTGGCCATCTCAAATCTTCCTTCACAGCAGCAAGAGG---------CATGAAAATATTAACAGATTTTTACCTGTCTCTGCCCG--tttcttt-------t----tttttttttttgagatggagtctcactctgtgacccaggctggagagcaatgatgtgatgtcggctcaccacaacctctgcccct-------------------------------------------gattacaggcacacaccaccacgcctggctgattttttgtctttttagtagagacaaggtttcaccttgttagccaggatggtctccatctcctgaccttgtgatctgcccaccttggcctcccaaagtgttgggattacaggggtgagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I a score=278913.000000 s hg38.chr19_GL949748v2_alt 913416 123 + 1064304 caccacgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATGTCTCTCCTGCTTGAATTCA-TGTG----------------------------------------------------------------------------CACACACACACACAC-- s panTro4.chr19 59853516 123 + 63644993 caccacgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATGTCTCTCCTGCTTGAATTCA-TGTG----------------------------------------------------------------------------CACACACACACACAC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56764294 122 + 60714840 caccgcgcctggccTCTGCCTGTTCT------------TTAATTCCTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGT-CTTTCATCTCTCTCCTGCTTGAATTCA-CGTG----------------------------------------------------------------------------CACACACACACACAC-- i ponAbe2.chr19 C 0 I 435 s nomLeu3.chr10 103299784 123 - 106955855 cactgtgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATCTCTCTCCTGCTTGAATTCA-CGTG----------------------------------------------------------------------------cacacacatacacac-- i nomLeu3.chr10 C 0 I 14 s rheMac3.chr19 60589853 165 + 64156825 caccgtgcctggccTCTGCCTATTCT------------TTAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTATCTCTCCTGCTGGAATTCA-CTCGCATGcacacgtgcgcacacacacgcacgcgcacata----------------------------------catacacacacacacacacac-- i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55728861 197 + 59248254 caccgtgcctggccTCTGCCTATTCT------------TTAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTCTCTCTCCTGCTGGAATTCA-CTCGCATGCACACGTGCGCACACACACGCATGCGcacatacacatacacacac--acacacacacacacacacgcacgcgcacacacacacacac-- i macFas5.chr19 C 0 I 18 s papAnu2.chr19 47831449 176 + 51301725 caccgtgcctggcctctgcctATTCT------------TTAATTCTTGTCAAGTTCGT-AAAGTTACATTTG--------AAATGAATTAACCAgtactttcttctctcttctgcttgaaTTCA-CTtgcatgcacacgtgcgcacgcacatgc----------------------acatacacacatacacatacacatacacacacacacacacacac-- i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47544374 137 + 50890351 caccgtgcccggccTCTGCCTATTCT------------TCAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTCTCTCTCCTCCTTGAATTCA-CTTGCATGCACACGTGCG--------------------------------------------------------------CGcacacgcacacac-- i chlSab2.chr6 C 0 I 18 s calJac3.chr22 45896556 120 + 49145316 caccacacccagcc----------------------------TTCTTACCAAGTTCTTACCAGTTACATTTT--------AAATGAATTA---AGGACTTCCATATCTCTCCTGCTTGAATTca-cata----cacacgcgcacacgca--------------------------------------------------------cgcacacacgcacac-- i calJac3.chr22 C 0 I 2 s canFam3.chr1 102623198 144 + 122678785 CACTATGTCTTGCTTTTTTTTTTTTTAACATCCTCTTGCCAGGTCTCATCAGATCTGTCAGTATCATACTTGGGGTATTCAGAGAAGCTATTAAATGCTTGCA--TCTGTGCTACTTGAATCCAGTATG----------------------------------------------------------------------------CACATGCACACAAATAA i canFam3.chr1 n 23589 C 0 a score=1041552.000000 s hg38.chr19_GL949748v2_alt 913539 291 + 1064304 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACAATCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAGAAGGATGAGAACATTTCCACAACTCCAACCTGCTCAGTGATGTCCACATGCTAGGGTACTCAGCTTCAGCCCTTCCTGT s panTro4.chr19 59853639 291 + 63644993 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACAATCAGGGTAACTCAAGCCTTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAGAAGGATGAGAACATTTCCACAACTCCAACCTGCTCGGTGATGTCCACATGCTAGGGTACTCAGCTTCAGCCCTTCCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56764851 291 + 60714840 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGAGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAAAGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACATGCTAGGGTCCTCAGCTTCAGCCCTTCCTGT i ponAbe2.chr19 I 435 C 0 s nomLeu3.chr10 103299921 291 - 106955855 ccaacaGGGACTTACACCAAAGTCTGCAGTTTACAGTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTACAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAAAAGTATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACGTGCTAGGGTCCTCAGCTTCAACCCTTCCTGT i nomLeu3.chr10 I 14 C 0 s rheMac3.chr19 60590036 291 + 64156825 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAGCTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATATCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55729076 291 + 59248254 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAGCTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATATCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i macFas5.chr19 I 18 I 303 s papAnu2.chr19 47831643 291 + 51301725 ccagcaGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47544529 291 + 50890351 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCGAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCTACATGCCAGGGTCCTCAGCTTCAGCCCTCCCTGT i chlSab2.chr6 I 18 C 0 s calJac3.chr22 45896678 290 + 49145316 CCAGCAGGGACTTACACCAGGGTCTGCAGTTTACAGTCGGGGTAACTCAAGCCCTCACACAGCAACTCCACCCCTCTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGATGCTGGTTGACAATCAAGACATTAGCAAGCTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAACATGAAACACATGGTCACATGATAAGAACGCTTCCCAAACTCCAACCTGCTC-GCCATGTCCACGTGCCGGGGTCCTCAGCATCTGCCCTGCCCGT i calJac3.chr22 I 2 C 0 s canFam3.chr1 102623342 290 + 122678785 CTAGCATGGACTTACACCAGCATCTGTAGTTGACAGTCAGGGTAACTCAAGCCTTCACACAGAAGCTTTACCCCATCATCTCCCAGAGTGTTCTTTGCCAAACTCAGGTGCGTCAGCCTCTGGTTGACAATCAAAGCTGAAGAGAGCTCTTTGCAACAGGCTTCTGTAAGTTGACAGTTTTCCAACCTGCCAAAGCACCACACAAATGGTAAGAGGGTGAGAACATTTCCAAAAC-CCAATTTTCTTGGCTGTCCCTAAAGGCCAGAGGCCCCATCTATGGCTCATCTTGT i canFam3.chr1 C 0 I 16 a score=206281.000000 s hg38.chr19_GL949748v2_alt 913830 71 + 1064304 TCATCCCCTGC--CCTCTGTCCTGTGGGAGTCATCATG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT s panTro4.chr19 59853930 71 + 63644993 TCATCCCCTGC--CCTCTGTCCTGTGGGAGTCATCATG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765142 71 + 60714840 TCATCCCCTGC--TCTCTGTCCTGTGTGAGTCATCACG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300212 71 - 106955855 TCATCCCCTGC--CCTCTGTCCTGTGCGAGTCATCACG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590327 71 + 64156825 TCATCCCCTGC--CCCCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55729670 71 + 59248254 TCATCCCCTGC--CTTCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i macFas5.chr19 I 303 C 0 s papAnu2.chr19 47831934 71 + 51301725 TCATCCCCTGC--CCCCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47544820 71 + 50890351 TCATCCCCTGT--CCTCTGTCCTGTGCAAGTCATCATG-------------GCCACAAAAGACCAGAAATGCGAGAAGGCCAAGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45896968 70 + 49145316 TAATCCCCTGC--CCTCTGTCCTGAGCG-GTCGTCACA-------------GCCGCAAAAGACCGGGAATGCGAGAAGGCCAAGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102623648 83 + 122678785 tcatctatagcatctatagctctatagcTCTCATCATGTGCTTAACACTCAATCATGAAGGA---AGGATGAGGGAATGATAAGAT i canFam3.chr1 I 16 C 0 a score=94809.000000 s hg38.chr19_GL949748v2_alt 913901 41 + 1064304 GCAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt s panTro4.chr19 59854001 41 + 63644993 GCAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765213 50 + 60714840 GCAGCGGTCCACCTGCAGCCATCACAGGACACCGGTGttctttcg--------------------tttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300283 70 - 106955855 GCAGCAGTCCACCTGGAGCCATCACAGGACACAGGTGTTCTTTCGtttgttttttttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590398 41 + 64156825 GTTGCGGTCCACCTGGAGCCGTCACAGGACACAGGTG-----------------------------ttgt i rheMac3.chr19 C 0 I 180 s macFas5.chr19 55729741 41 + 59248254 GTAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt i macFas5.chr19 C 0 I 181 s papAnu2.chr19 47832005 41 + 51301725 GTAGCGGTCCACCTGGAGCCCTCACAGGACACAggtg-----------------------------ttct i papAnu2.chr19 C 0 I 693 s chlSab2.chr6 47544891 41 + 50890351 GTAGCGGTCCACCTGGAGCCGTCACAGGACACAGGTG-----------------------------ttct i chlSab2.chr6 C 0 I 9 s calJac3.chr22 45897038 39 + 49145316 GCAGCGGGCCACCTGTAACCATCTCAGGAAGCAGCTG-----------------------------TT-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=27454.000000 s hg38.chr19_GL949748v2_alt 913942 11 + 1064304 ttttgagacgg s panTro4.chr19 59854042 11 + 63644993 ttttgagacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765263 11 + 60714840 ttttgagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300353 11 - 106955855 ttttgagacgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590619 11 + 64156825 ttttgagacgg i rheMac3.chr19 I 180 C 0 s macFas5.chr19 55729963 11 + 59248254 ttttgagacgg i macFas5.chr19 I 181 C 0 s papAnu2.chr19 47832739 11 + 51301725 ttttgagacgg i papAnu2.chr19 I 693 C 0 s chlSab2.chr6 47544941 11 + 50890351 ttttgagatgg i chlSab2.chr6 I 9 I 175 e canFam3.chr1 102623731 0 + 122678785 C e calJac3.chr22 45897077 0 + 49145316 C a score=273560.000000 s hg38.chr19_GL949748v2_alt 913953 106 + 1064304 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgccaatcgccgcctcccaggtttacaccattctgctgactcagcctcctgagta s panTro4.chr19 59854053 106 + 63644993 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgccaatctccgcctcccaggtttacaccattctcctgactcagcctcctgagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765274 106 + 60714840 agtctcgctctgtcgcccaggctggagtgcagtggcacgatctcagctcactgccaatctccgcctcccgggttcacgccattctcctgactcagcctcctgagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300364 105 - 106955855 agtctcgctctgtcgcccaggctggagtgcagtggtgcaatctcggctcactg-caagctccgccgcccaggttcacgccattctcctgcctcagcctcctgagta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590630 106 + 64156825 agtctcgctctgtcgcccaggctggagtacattggcgctatctcggctcactgcaaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55729974 106 + 59248254 agtctcgctctgtcgcccaggctggagtacattggcgctatctcggctcactgccaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832750 106 + 51301725 agtctcactctgtcgcccaggctggagtacattggcgctatctcggctcactgccaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545127 106 + 50890351 agtctcgctctgtcgcccaggctggaatgcattggcgctatctcggctcactgccaagctccgcctcctgggttcacgccattctcctgccttagtctcccgagta i chlSab2.chr6 I 175 C 0 s calJac3.chr22 45897077 80 + 49145316 -------------------------Tgtgcagtggcgccatctcggctcacag-caacctccacctcccgggctcaagcgattctcctgcctcagcctcctgagta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=288747.000000 s hg38.chr19_GL949748v2_alt 914059 132 + 1064304 gctgggactacaggcgc-----------------------ccaccacacctggataattttttgtattttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcttgacctcgtgatctccccgccttggcctcccaacgt s panTro4.chr19 59854159 155 + 63644993 gctgggactacaggcccacctactgggtataaaaaattatccaccacacctggataattttttgtattttttagtagagacggagttttaccatgttagccaggatggtctcgatctcttgacctcgtgatctccccgccttggcctcccaacgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765380 132 + 60714840 gctgggactacaggcac-----------------------ccaccacgcctggataattttttgtattttttagtagagatggggtttcaccgtgttagccaggatggtctcaatctcttgacctcgtgatccacccgccttggcctccaaacgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300469 132 - 106955855 gctgggactacaggcgc-----------------------ccaccacgcctggataatttttcgtattttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcttgacctcgtgatctgcccgccttggcctcccaacgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590736 135 + 64156825 gctgggactacgggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagaggtggggtttcaccatgttagccaggatggtctcgatctcttggcctcgtgatccgcccgccttggtctcccaaagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730080 135 + 59248254 gctgggactacaggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagagatggggtttcaccatgttagccaggatggtctccatctcttgacctcgtgatccgcccgccttggtctcccaaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832856 135 + 51301725 gctgggactacaggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcttgacctcgtgatccgcccgccttcgtctcccaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545233 124 + 50890351 gctgggactacaggcgccca--------------------ccaccgcacccggctaattttctgtattttttagtagagacggggtttcactgtgttagccagcatggtctcgatctcttgaccttgtgatccgcccgccttc-----------t i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C e calJac3.chr22 45897157 0 + 49145316 C a score=386734.000000 s hg38.chr19_GL949748v2_alt 914191 139 + 1064304 gctgggatt--acaggcatgagccaccgcacccggccTG--Tttttggtatttttaatagaaacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacct----ctc------tgctgagattacag s panTro4.chr19 59854314 139 + 63644993 gctgggatt--acaggcatgagccaccgcacccggccTG--Tttttggtatttttaatagaaacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacct----ctc------tgctgagattatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765512 139 + 60714840 gctgggatt--acaggcatgagccaccgcgcccggccTG--Tttttggtatttttaatagagacacggtttcaccacgttggccaggttggtctcaaactcctgaactcagatgatccgcccacct----ctc------tgctgagattacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300601 139 - 106955855 gctgggatt--acaggcgtgagccaccgcgcccagccTG--Tttttggtatttttaatagagacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatctgcccacct----ctc------tgctgagattacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590871 151 + 64156825 gctgggctt--acagacgtgagccaccacacccaccctgttttttttgtatttttaatagagacggggtttcgccatgttggccagggtggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtggtgagattacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730215 151 + 59248254 gctgggatt--acaggcgtgagccaccacacccaccctgttttttttgtatttttaatagagacggggtttcgccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832991 151 + 51301725 gctgggatt--acaggcgtgagccaccacacccaccctgttttttttgtatttttaatagagacagggtttcgccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545357 150 + 50890351 gctgggatt--acaggcgtgagccaccgcacccaccctg-tttttttatatttttaatagagacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897157 150 + 49145316 gctgggatgcaccagacatgcacagccacagctg-tcag--tttttggtattcttagtggagacagggttttgccatgttggccaggttggtctcgaactcctgacctcagatgatctaccctcttcggcctcccaaagtgctgagattacag i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=1190693.000000 s hg38.chr19_GL949748v2_alt 914330 372 + 1064304 gcaggagccaccgtgccggg--ccTGAAG-------CAGGTGTTTATTTCAGCAAGAGGCGCCACGTGGGTGGCGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATAGCCCCAGAACTA-AACCAGAGCTGCCCATGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTTTGGGCGTGTCATGGTCTTGTACAGCAACATGGCACCCTCATCCAGGAGCACATTGGCTGAGAGACGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC s panTro4.chr19 59854453 372 + 63644993 gcaggagccaccgtgccggg--ccTGAAG-------CAGGTGTTTATTTCAGCAAGAGGCACCACGTGGGTGGTGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATAGCCCCAGAACTA-AACCAGAGCTGCCCATGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTTTGGGCGTGTCATGGTCTTGTACAGCAACATGGCACCCTCATCCAGGAGCACATTGGCTGAGAGACGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765651 372 + 60714840 acaggagccaccgcgcccgg--ccTGAAG-------CAGGTGTTTATTTCAGCGAGAGGCGCCACGTGGGTGGCGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAACTA-AACCAGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTCTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACATTGGCTGAGATGTGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC i ponAbe2.chr19 C 0 I 20 s nomLeu3.chr10 103300740 372 - 106955855 gcaggagccaccgcgcccag--ccTGAAG-------CAGATGTTTATTTCAGCGAGAGGCGCCACGAGGGTGACGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAACTA-AACCAGAACTGCCCGTGGGAAGAGGAA----ACTTACGACAACATCTGCAGGAAGTGTTCTGGGTGTGTCATGGTCTTGTACAGCAACTGGGCACCCTCGTCCAGGAGCACATTGGCTGAGAGATGCAGGTGCTTCAGGGACTCATTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCTGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTACACCCTATCAGC i nomLeu3.chr10 C 0 I 12 s rheMac3.chr19 60591022 371 + 64156825 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTGTCTCTTCTATGGCCCCAGAGCTA-AACCGGAGCTGGCCGTGGGAAGAGGAT----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAtt i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55730366 371 + 59248254 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACCGGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGGGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAGC i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47833142 371 + 51301725 gca-gagccaccatgcccag--cctgaag-------caGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGACCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACTGGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCGTGGGAA-AAGTCATTCTTCTAGGAGGACAGAGTATAACctatcagc i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47545507 371 + 50890351 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCATGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACCGGAACTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAAGAGAAATCAGCCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCATAGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAgt i chlSab2.chr6 C 0 I 320 s calJac3.chr22 45897307 370 + 49145316 gcatgagtcaccatgcccag--ccTGAAG-------CGGGTGTTTCTATCAGGGAGAGGTACCACGTGGGCAGCCCAGCAAGT-CGGGTGTTACA-----GTTTCCCTTCTCTTTTACCTGACCCA-CACCAGAGCTCCCCATGGGAAGAG-------ACTCACGACAACTTCTGCAGCAAGTTCGTTGGGTGTCCTATGGTCTCATACAGCAACTTGGCACCCTCGTCCAGGAGCAGATTGGCTGAGAGGTGTAGGTGCCTCAGGGACTGGTTCGCTTTGAGAAGAAAGGAGAAATCCGCCCACTGCTCTGGGGTGGCCGAGTGGCCTCCAAACCTGTGGGAAGAGTGGGAGTCAGTCATTCGTTTGTGAGGACAGAGAGCACCAGATCAGC i calJac3.chr22 C 0 I 5 s canFam3.chr1 102623731 383 + 122678785 GCATGAGCCA-CATACCTGGGACCAGAAATGGGAACCAGGTGTCCACATCAGTAGGAGGTCCCATATGGGTAGTCCAGCAAATCCAGATTTTACCCACTGCTCTTCCCTATGTGGCCCCAAACATAGGAAAAGAGATGCTCCCAGGGAGAGAGGCAGTACTTACGACAGTCTCTGCAGGAAGCATTTTGGGTGTCTCAGAGTTGTGCACAGCAACTTGGCACTCTCATCTGGGAGCTCATTGGCTGTGAGGTTCAGGCATGTCAGGGACTGGTTGATTTTGAGGGAGGAGGAGAGATGGGCCCATTGCTGAGTGGTGGCAGAACAAGATACCAACCTGCCAGAAGAATGGGAACACATTATTTTTTTTAAAG---------TAtttttttaac i canFam3.chr1 C 0 C 0 a score=41193.000000 s hg38.chr19_GL949748v2_alt 914702 11 + 1064304 ttttttttttt s panTro4.chr19 59854825 11 + 63644993 ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766043 11 + 60714840 ttttttttttt i ponAbe2.chr19 I 20 C 0 s nomLeu3.chr10 103301124 11 - 106955855 ttttttttttt i nomLeu3.chr10 I 12 C 0 s rheMac3.chr19 60591395 11 + 64156825 ttttttttttt i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55730739 11 + 59248254 ttttttttttt i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47833515 11 + 51301725 ttttttttttt i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47546198 11 + 50890351 ttttttttttt i chlSab2.chr6 I 320 C 0 s calJac3.chr22 45897682 11 + 49145316 ttttttttttt i calJac3.chr22 I 5 C 0 s canFam3.chr1 102624114 11 + 122678785 ttttatttatt i canFam3.chr1 C 0 I 3380 a score=359343.000000 s hg38.chr19_GL949748v2_alt 914713 126 + 1064304 ---------------gagacagagtttcactctgttgcccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccgcctcccgggttcaagctattctcctgcctcagcctccgaagtagctgggattacagg s panTro4.chr19 59854836 126 + 63644993 ---------------gagacagagtttcactctgttgcccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccgcctcccgggttcaagctattctcctgcctcagcctccgaagtagctgggattacagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766054 126 + 60714840 ---------------gagacagagtttcactctgttacccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccacctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301135 126 - 106955855 ---------------gagacagagtttcactctgttgcccagtctggagtgcaaaggtgtgatctcacctcactgcagcctccgcctcccgggttcaagccattcttctgcctcagcctcccaagtagctgggatgacagg i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60591406 126 + 64156825 -------------gggggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730750 139 + 59248254 tttttttttttgggggggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833526 128 + 51301725 tttt-----------gggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47546209 124 + 50890351 ---------------gagac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccgcctcccgggttcaagcgattctcctgcctcagcctcccaagcagctgggattacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897693 141 + 49145316 ttttttttttttaaggagacagagtttcaccctgttgctggggctggagcccaatggcacaatctcggctcactgcagcctccgcctcccaggttcaagcaattctcctgcctcaacctctcaagtagctaggattacagg i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I a score=171564.000000 s hg38.chr19_GL949748v2_alt 914839 85 + 1064304 ----------cattc---gccaatttttgtatttttagtagagacgggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc s panTro4.chr19 59854962 85 + 63644993 ----------cattc---gccaatttttgtatttttagtagagacaggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766180 85 + 60714840 ----------catac---gccaatttttgtatttttagtggagatgggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60591532 85 + 64156825 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcctgacctcaggtaatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730889 85 + 59248254 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttggactcccgacctcaggtaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833654 85 + 51301725 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcccgacctcaggtaatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47546333 85 + 50890351 ----------cacac---gccaatttttatatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcccgacctcaggtaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897834 86 + 49145316 cacatggcaccatgcccggctaatttttgta-ttttattaaagaggg-----------gtttgccaggctggtctcaaactcctgacgtcaggtgatt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e nomLeu3.chr10 103301261 100 - 106955855 M a score=614228.000000 s hg38.chr19_GL949748v2_alt 914924 214 + 1064304 cacccaccttggcctaccgaagtactgggattacaggtgtgagccaccgcgcctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGCCTCCAACCCTGGCCTGAATTACTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGGGTAACATCCAGCCA s panTro4.chr19 59855047 214 + 63644993 cacccaccttggcctcccgaagtgctgggattacaggcgtgagccaccgcgcctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGCCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766265 214 + 60714840 cacccacctcggcctcccaaagtgctgggattacaggcgtgagccactgcacctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTCGTTTATCTCATTCTA--CTCATGTCTGCAACCCTGGCCTGAATTATTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGAATAACATCCAGCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301361 214 - 106955855 cacccacctcggcctcacaaagtgcagggattacaggcgtgagccaccatgcctggcc-CAGATCAGCTTGTTATGCTTCACTTCCCAAGACAATATGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCGTGAATTATTGGAAAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATAGCCACTAGAGTAACATCCAGCCC i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 60591617 213 + 64156825 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcccggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACG-TACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730974 213 + 59248254 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcccggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACG-TACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAGCCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833739 211 + 51301725 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacacctggct-cacatTAG---CTTCTGCTTCACTTCCCAAAACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACTCCGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCa i papAnu2.chr19 C 0 I 5286 s chlSab2.chr6 47546418 214 + 50890351 cacccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcctggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACGTTACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCCTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897920 216 + 49145316 cgcccacctcggcctcccaaa-tgctgggattaaaggtgtgagccaccacacccggccTCTTATCAGCTTCTTATGCTTCACTTCCCAAAACACTGTGTCTTTGGTTTATCTCATTTTACTCTCCTTTCTCCAACCCTGGCCTGAATTATTGGAGAAATCTAATCTTTCCTCTGCTTCTTCAAGTTTCCTCATGGCCACTGGAGCTACGTCCAGCCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I a score=1159471.000000 s hg38.chr19_GL949748v2_alt 915138 533 + 1064304 CTTCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGCAGGGGGGAAAAAAAAAttttttttttgagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcaaatgatcctccc-acctcagcatccactgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggcgcagtggttcatgcctgtaatcctagcactttggga---ggccgagacaggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccct-gtctctattaaaaatacaaacatttgccaggcgtggtggtgcacgcctgtaaccccagctactcgggaagctgaggcag---aactgcttg-aacccaggaggcggaggttgcagtgaa-cgagatcgcgccactgcgctccagcctgggtgacaagaataaaact s panTro4.chr19 59855261 540 + 63644993 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGTAGGCGG-AAAAAAAAAtttttttttttagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggccaccacaac--ctgtctcctgggctcaaatgatcctccc-acctcagcatccactgtagctgggactaGAAGGGGCAAGCAAATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccccgtctctattaaaaatacaaacatttgccaggcgtggtggtgtatgcctgtaaccccagctactcgggaagctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-cgagatcgcaccactgcactccagcctgggtgacaagaataaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766479 533 + 60714840 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGAGGATTTTGTAGGGGG---AAAAAAAttttttttttgaaacagcatatcgctctgttgcccaggctagagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcaaatgatcttccc-acctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAATTTTTATCCTggccaggtgcagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctattaaaaatacaaacatttgccaagcgtggtggtacatgcctgtaaccccagctactcgggaagctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-tgagatcgcactactgcactccagcctgggcaacaagagtaaaact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301575 530 - 106955855 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGTAGGGGG---AAAAAAAttttttttttgagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcagatgatcctccc-acctcagcctccagtgtagctggaactaGAAAGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtacagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggttcacttgagatcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctattaaaaatacaaacatttggcaggcgtggtggtgcgtgcctgtaacccgagctacttgggaggctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-tgagatcgcaccactgcactccagcctgg---acaagaggaaaact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60591830 540 + 64156825 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGAAGATTTTGTAGGGAA---GAAAAAA-AttttttttgagacaggatctcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaacctctgtctcctgggctcaaatgatcctcccaacctcagcctctagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggctcatgcctgcaatcctagcactttgggatccggcccaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccaacgtggtgaaacccc-gtctctactaaaaatacaaacatttgttgggcatggtggtacatgcctgtaatcccagctgcttgggaggctgaggcaggagaatcgcttgaaacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccagccttggtgacaagagtaaaact i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55731187 538 + 59248254 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGATGATTTTGTAGGGAA---GAAAAAA-Attttttttgagacaggatctcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaac--ctgtctcctgggctcaaatgatcctcccaacctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggctcatgcctgcaatcctagcactttgggatccggccgaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccaacgtggtgaaacccc-gtctctactaaaaatacaaacatttgttgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaaacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccagccttggcgacaagagtaaaact i macFas5.chr19 C 0 I 112 s chlSab2.chr6 47546632 527 + 50890351 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCGCCAAAATGGCCTGTGTGGATGATTTTGTAGGGGG---GAAAACAttttttttttgagacaggatttcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaacctctgtctcctgagctcaaatgatcctcac-acctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggtccatgcctacaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccagcgtggtgaaacccc-gtctctactaaaaatacaaacatttgccgggcatagtggtgcatgcctgtaatcccagctactcgagaggctgaggcaggagaatcgcttg-aacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccag---------caagagtaaaact i chlSab2.chr6 C 0 I 7 s calJac3.chr22 45898136 530 + 49145316 CGTCTCCAAGAGACTGTAATAGAATTCTGTGTAACGTTTCACCAACAGGGCCTGTGGGGATGA-TTTGTAGGGGA---AAA-----Gttgtttttgagacaggaactcgctctgttgcccaggctggagtgcagtggcgtgatcatggctcagcaccacctctgtctccagggctcaagcaatcctcct-acctgggactccagcatagctgggactagaagggggaa----attgatgcttaatactcaaaataataagtttatcctggccaggcaggatggcttttgcctataatcccagcacttgggga---ggcagaggcaagttgatcacttgaggccaggagttcgagacaagcctggccagcatggtgaaccccc-atctctactaaaaatacaaaaattagctgggtgtggtggtgtgtgcctgtaatcccaggtacttgggaggctgagacaggagaatcacttg-aacccgggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctgggtgacaagaataaaact i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I a score=28256.000000 s hg38.chr19_GL949748v2_alt 915671 25 + 1064304 gtctcaaagaaaaaaaaaaaaaaaa s panTro4.chr19 59855801 24 + 63644993 gtctcaaagaaaaaaaaaaaaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767012 22 + 60714840 gtctcaaagaaaaaaaaaaaaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302105 22 - 106955855 gtctcaaagaaaaaaaaaaaaa--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592377 22 + 64156825 ccctcaaaaaaaaaaaaaaaac--- i rheMac3.chr19 I 7 C 0 s chlSab2.chr6 47547166 25 + 50890351 ctctcaaaaaaaagaaaaaaaaaaa i chlSab2.chr6 I 7 I 1 s calJac3.chr22 45898666 23 + 49145316 --gtcaaaaaaaaaaaaaaaaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I e macFas5.chr19 55731725 112 + 59248254 I a score=1074725.000000 s hg38.chr19_GL949748v2_alt 915696 533 + 1064304 aagaTTCTCAT-TGAGTGCAGAGAaggttgcatgctccttatgaatacctaactcctgatgatctgagattgatgatccattctcctcagGCTCCCAAAGTGCGAGGATCAT-GCACTCCATA-GGATCAGGCACCAACGATTAGCTCCTGTGCC---tgatctgagatcgaacagtttcatcccaaaactacccccaaaccc--gtctgtggaaaaaactgtcttgtgcaaaaccggcccgcggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAATTAGGCAAGGTGCAGTCAGGAATAGCATGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTGCATGGATAGCTGGTTATGCAACACAGAAGACAAGCTGGTGGGGGAAAGAGGAGAGGCCGACTCCCCCACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCCCCAGCAACACGGTGCAGTGGACTCCAGGTGCTGGGGAGAGCC s panTro4.chr19 59855825 529 + 63644993 --gaTTCTCAT-TGAATGCAGAGGaggttgcaggctccttatgaatacctaactcctgatcatctgagattgatgatccattctcctcaggctcccaaagtgcggggatcaT-GCACTCCATA-GGATCAGGCACCAATGATTAGCTCCTGTGCC---tgatctgagattgaacagtttcatcccaaaactacccccaaaccc--gtctgtggaaaaa-ctgtcttgcgcaaaaccggcccgcggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAATTAGGCAAGGTGCAGTCAGGAACAACATGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTCCATCGATAGCTGGTTATGCAACACAGAAGACAAGCTGGCGGGGGAAAGAGGAGAGGCCGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCCCCGGCAACGCGGTGCAGTGGACTCCGGGTGCTGGGGAGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767034 531 + 60714840 --GATTCTCA--TGAGTGCAGAGAaggttgcatgctctttatgagtacctaactcctgatgatctgagattgatgatccatttacctctggctcccaaagtgctgggatcatagCACTGCATA-AGATCAAGCACCAACGATTAGCTCCTGTGCC---tgatctgagattgaacggtttcatcccaaaactacccccaaacccctgtctgtggaaaaa-ctgtcttgcacaaaaccgacccctggtgcagaaaaggctgggggccactgCTCTCAAACCCAACAGTTTGGCAAGGAGCAGTCAGGAATAGCACATCCCTAAAGTTGGAACCCAGCACAGAATTCCGGGTGTTTCTTTGCATCAGTAGCTGGTTATGCAACACAGAAGTCAAGCTGGCAGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTGCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCGCCGGCAACACGGTGCAGTGGACTCCAGGTACTGGGGAGAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302127 531 - 106955855 --GATTCTCA--TGAGTGCAGAGAaggttgcatgctccttctgagtaccgaactcctgatgatctgagattgatgatccattcacctcaggctcccaaagtgctgggatcatagCACTGCATA-GGATCAAGCACCAACGATTAGCTCCTGTGCC---tgatctgagattgaacagtttcatcccaaaactacccgcaaacccctgtctgtggaaaaa-ctgtcttgcacaaaaccgggccccggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAGTTAGGCAAGGTGCAGTCAGGAATAGCACGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTGCATTGATAGCTGGTTATGCAACACAGAAGTCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCAG-ACACAGGCCTGTTTGAGGAATACACTCCCTGTCTGGGATGGTATCTGGAGTGTTTATCCTTTTTCCTAGATCCCCCTGCAACACGGTGCAGTGGACTCCGGGTACTAGGGAGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592399 536 + 64156825 aaGATTCTCATAGAAGTACAGAGAaggttgcatgctcc--atgagtacctaactcctgatgatctgagattgaTgatccattcacctcagactcccaaagtgctgggatcatagCACTGCATAGGGCTCAGGCACCAACAATCAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaacta-ccccgaacctctttctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctgggggccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAGAGCCGGAACACAGCACAGAATTCGGGGGGTTTCTTTGCATCGAGAGCTGGTTATGCGACGCAGAAGCCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCCGTCTGGGACGGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCCGGCAACGTGGTGCAGCGGACTCTGGGTACTGGGGAGAGCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55731837 538 + 59248254 AAGATTCTCATAGAAGTGCAGAGAaggttgcatgctccatatgagtacctaactcctgatgatctgagattgatgagccattcacctcagactcccaaagtgctgggatcatagCACTGCATAGGGATCAGGCACCAACAATTAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaacta-ccccgaacctctgtctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctgggggccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAGAGCCGGAACACAGCACAGAATTCGGGGGGTTTCTTTGCATCGAGAGCTGGTTATGCGACGCAGAAGCCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCCGTCTGGGACGGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCCGGCAACGCGGCGCAGCGGACTCTGGGTACTGGAGAGAGCG i macFas5.chr19 I 112 C 0 s chlSab2.chr6 47547192 539 + 50890351 aaGATTCTCATAGGAGTGCAGAGAaggttgcacgctccatgtgagtacctaactcctgatgatctgagattgatgatccgtttacctcagactcccaaagtgctgggatcatagCACTGCATAGGGATCAGGCAGCAACAATTAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaactacccccgaacctctgtctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctggggaccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAAAGCCGGAACACAGTACAGAATTCGGGGTGTTTCTTTGCATCGAGAGCTGGTTATGCGACCCAGAAGTCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACAGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCTGGCAACGTGGTGCAGCGGACTCTGGGTACTGGGGAGAGCG i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45898689 479 + 49145316 aggaatctcataggactat-gagaaggttgcatgctccctgtgagtccctaactcctaatgatctg-gactgatgatctatccgcctcaggctcccaaagtactgggatcacCTCACTGCACGGGGATCAGGCACCA-------------GAgcctgatgatctgagattgaacagtttcatcccaaaacttcccccaaacccctgtctgtggaaaac-ctgtcttgcacaaaaccggtccccagtgcagaaaaagctggcggccgctgCTCTCAATCCCAGCAGGTAGGCGAGAGGCAGTCAGGGGTAGCCCGTTTCTAAAGCTGGAACACAGCACAGAGTTCTGGGTGTTTCTTTGCATGGAGAGCTGGTCATGTCACACCGAAGTCAAGCTGGTGGGGG---GAAGAGAGGCTGACACCCC-ACACAGGCCTGTTTGAGGGATATGTTTCCTGCCTG------------------------------------------GCAACGCGGTGTAGAGGACTCCGGGTCCTCGGGAGAGCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I a score=234680.000000 s hg38.chr19_GL949748v2_alt 916229 94 + 1064304 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGGTCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT s panTro4.chr19 59856354 94 + 63644993 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGGTCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767565 94 + 60714840 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGATCACACAGCATCAGCATCATTGTGCGTTCCCACTCGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302658 94 - 106955855 GTGACCGTGAGACCCACCTCAGGTACTGCAGTTTGCATTTATGATTTCTGAGCAGATCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592935 94 + 64156825 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGAGCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732375 94 + 59248254 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGAGCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47547731 94 + 50890351 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGACCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899168 94 + 49145316 AAGACCGTGAGACGCACCTCAGGTACTGGAGGTTGCCTCTGGGAGTCCTGAACAGGTCACACATCAGCAGCAGCATCGTGCGTTCCCACTCGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627505 88 + 122678785 GTGATGGTGAGATATACCTGAGGTATTGCAGATTACATTTTGGGTGTCTCAAGATTTCACACAAAATGGGAAGCATATCA---TTCTGGTC--- i canFam3.chr1 I 3380 C 0 e papAnu2.chr19 47833950 5286 + 51301725 I a score=351939.000000 s hg38.chr19_GL949748v2_alt 916323 114 + 1064304 GTGCCCTGCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCGGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA s panTro4.chr19 59856448 114 + 63644993 GTGCCCCGCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCGGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767659 114 + 60714840 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302752 114 - 106955855 GTGCCCTTCCAGAGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593029 114 + 64156825 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCCTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGGAGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732469 114 + 59248254 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCCTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGGAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3416370 112 - 51301725 GTG-CCTTGCAGGGTCAGATGCGTTACAGTCTTGTGACCTCGAAGAGCTAGGCAGAGGTTCCGATGAGCATCAGCTGGGAAAACGTTTTTGAACCTAgggaaaa-caaaagtga i papAnu2.chr19 T 54731 I 1199 s chlSab2.chr6 47547825 114 + 50890351 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACATTTTTAATCCTAGGGAAAAGCAGAAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899262 114 + 49145316 ATGCCCTTCCAGGGTCAGGTGAGTGAGGGTCGGCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCACTGTCAGGGGTGACGTTTTTAATCCTAGGAAAAAGCAAGAGAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627593 113 + 122678785 ATTTCCTTGGAGAGTCAGATGCGTGAGAGTCTCATGACCACCAAAAGCAATGCAGAAGTTTCTATAAGCGTCTGCTGGGAAAATATTTTTGAGGCTAGGGAAAGG-ATAAGAAA i canFam3.chr1 C 0 C 0 a score=157049.000000 s hg38.chr19_GL949748v2_alt 916437 75 + 1064304 TTCCACTTGGAGTGATTAATACTCACATTGTGTGGAGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT s panTro4.chr19 59856562 75 + 63644993 TTCCACTTGGAGTGATTAATCCTCACATTGTGTGGAGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767773 75 + 60714840 TTCCACTTGGAGTGATTAATCCTCACATTGCGTAGAGGCGTGTATAAACAAAAAGCTGTTTCCCATTTAGAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302866 54 - 106955855 ---------------------CTCACATTGTGTAGCGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593143 75 + 64156825 TTCCACTTTGAGCGAGCAATCCTCACGTTGTGTAGAGACATGTATAAACGAAAAGCTGCTTCACATTTAGAAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732583 75 + 59248254 TTCCACTTTGAGCGAGCAATCCTCACATTGTGTAGAGACATGTATAAACGAAAAGCTGCTTCACATTTAGAAACT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47547939 75 + 50890351 TTCCACTTTGAGCGAACAATCCTCACATTGTGTAGAGACATGTATAAACAAAAAGCTGTTCCACATTTAGAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899376 75 + 49145316 TTCCACTTGGAGTGTTTAATCCTCACATTGTGTAGAGGCATGTATAAACAAAAAGCTGTTTCAGATTTAGAAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627706 59 + 122678785 -------------GGTGAAATCTTGCATT---TATATATACATGAGAACAAAGGGCTGCAACAGGTTTAAACACT i canFam3.chr1 C 0 I 1798 e papAnu2.chr19 3416482 1199 - 51301725 I a score=315927.000000 s hg38.chr19_GL949748v2_alt 916512 137 + 1064304 ATTAGAAGTTCTTggccgggtgcagtggctcgtgtctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaacctgggcaacatggtgaaactccatctctacaaaaa s panTro4.chr19 59856637 137 + 63644993 ATTAGAAGTTCTTggccgggtgcagtggctcgtgtctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaatctgggcaacatggtgaaactccatctctacaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767848 137 + 60714840 ATTAGAAGTTCTTggccaggtgcagcggctcacgtctgtaaccccagcactttgggagactgaggcaggaggataacctaaggtcagaagtctgagaccaacctgggcaacatggtgaaaccccatctctacaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302920 137 - 106955855 ATTAGAAGTTCTTggccgggtgcagcggctcatggctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaacctgggcaacattgtgaaaccccatctctacaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593218 137 + 64156825 ATTAGAAGTTCTTggccaggcacggcggctcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatgttgaaaccccatctctacaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732658 137 + 59248254 Attagaagttcttggccaggcacggcggttcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatgttgaaaccccatctctacaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47548014 137 + 50890351 ATTAGAAGTTCTTggccaggcacggcggctcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatggtgaaaccccatctctacaaaaa i chlSab2.chr6 C 0 I 1094 s calJac3.chr22 45899451 135 + 49145316 ATTAGAAGTTCCTggccaggcgcggtggctcacgtctgtaat--tggctctttgggaggccgaggcaggaggataacccgaggtcaaaagttcgagaccagcctgggcaacatggtgaaagcccatctctacaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e papAnu2.chr19 3416482 1199 - 51301725 I a score=254.000000 s hg38.chr19_GL949748v2_alt 916649 3 + 1064304 at----a s panTro4.chr19 59856774 3 + 63644993 at----a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767985 7 + 60714840 atacaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303057 7 - 106955855 atacaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593355 3 + 64156825 at----a i rheMac3.chr19 C 0 I 870 s macFas5.chr19 55732795 3 + 59248254 at----a i macFas5.chr19 C 0 I 4 s calJac3.chr22 45899586 1 + 49145316 ------a i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I a score=65174.000000 s hg38.chr19_GL949748v2_alt 916652 106 + 1064304 aat---------------tagct-------------------------ggggccgaggcaggcagatcgcctgaggtcaggagttcgagaccagcctggccaacatggggaagccccgtctctactaaaaatacaaaaatta--gctg s panTro4.chr19 59856777 106 + 63644993 aat---------------tagct-------------------------ggggccgaggcaggcagatcgcctgaggtcaggagttcgagaccagcctggccaacatggcgaagccccgtctctactaaaaatacaaaaatta--gctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767992 106 + 60714840 aat---------------tagct-------------------------ggggccgaggcaggcggaccgcctgaggtcaggagttcgagaccagcctggccaacatggcaaagccccgtctctactaaaaatacaaaaatta--gctg i ponAbe2.chr19 C 0 I 442 s nomLeu3.chr10 103303064 106 - 106955855 aat---------------tagct-------------------------ggggccgaggcaggtggatcgcctgaggtcaggagctcgagaccagcctggccaacatggcgaagccctgtctctactaaaaatacaaaaatta--gctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55732802 148 + 59248254 aatgaaggccaggtgcagtagctcacgtctataatcccagcactttgggagtccgaggcaagagaatcacttgaggtcaggagtttgagaccagtctgggcaacatggtgaaaccccaactccacaaaaaatacaaaaattaAggccg i macFas5.chr19 I 4 C 0 s calJac3.chr22 45899587 16 + 49145316 ----------------------------------------------------------------------------------------------------------------------------------atacaaaaatta--gctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=68481.000000 s hg38.chr19_GL949748v2_alt 916758 156 + 1064304 cacatggaggggcatgcttgtagtcccaggtattcgggaggctgaggtaggagaatcacttgaatccaggaggcagaggttgcagtgagccgagaccgcaccactgcactccagcctgggcaacagagcaagactccatctc------aaaagaaaaaaaaa s panTro4.chr19 59856883 156 + 63644993 cacatggaggttcatgcttgtagtcccaggtatttgggaggctgaggtaggagaatcacttgaatccaggaggcagaggttgcagtgagccgagaccgcgccactgcactccagcctgggtaacagagcaagactccgtctc------aaaagaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303170 149 - 106955855 cacatggaggtgcacgcttgcagtcccaggtattcgggagcctgaggtaggagaatcacttgaatccaggaggcagagtttgcagtg----gagatca---------agaccatcctggctaacacggtgaaaccccatctctactaaaaatacagaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55732950 127 + 59248254 agcacagtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcac---------gaggtcag---------------gagatcg---------agaccatcctggctaacacagtgaaaccccgtctctact--aaaaatacaaaaaa i macFas5.chr19 C 0 C 0 s calJac3.chr22 45899603 155 + 49145316 ggcatggtggtgggcacctgcaatcccagctacttgagagtttgaggcaggagaattgcttaaacccgggaggtagaggctgcagtgagccaagactgcaccactgcactccagcctgg-tgacagagcaagactccgtctc------agaagaaaataaaa i calJac3.chr22 C 0 I 164 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=7831.000000 s hg38.chr19_GL949748v2_alt 916914 18 + 1064304 TTCgccgggtgtggtggc s panTro4.chr19 59857039 18 + 63644993 TTTgctgggtgtggtggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303319 18 - 106955855 ttagccgggtgtggtggc i nomLeu3.chr10 C 0 I 39 s macFas5.chr19 55733077 18 + 59248254 ttagctgggcgtggtaac i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=41853.000000 s hg38.chr19_GL949748v2_alt 916932 269 + 1064304 tcacgcctgtaatcccagcactttgggaggccgaggccgaggcgggtggatcacgaggtcaggagatcaaga-------------------------------ccatcctggctaacacggtgaaaccccgtctt-----------------tactaaaat----------------------------------------------------------------------------------------tacaaaaaactagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcagggcttgcagtgagccgagattgctgcactgcactccagcctggggaacatagcgagactgtctc- s panTro4.chr19 59857057 269 + 63644993 tcatgcctgtaatcccagcactttgggaggccgaggccgaggcgggtggatcacgaggtcaggagatcaaga-------------------------------ccatcctggctaacacggtgaaaccccgtctc-----------------tactaaaat----------------------------------------------------------------------------------------tacaaaaaactagccgggcgtggtggcaggcgcctgtagtcccagctactagggaggctgaggcaggagaatggcgtgaacccgggaggcagggcttgcagtgagccgagattgcagcactgcactccagcctggggaacatagcgagactgtctc- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55733095 402 + 59248254 gggcgcctgtagtcccagctactcgggaggctgaggc--aggagaatgg--catgaacctgggaggcggaggttccagcgagccgagattgcgccactgcactccagcctgggcgacaaagtgagactccatgtcaacaacaacaacaaaaatacaaaaaTTAGCgggggccaagacaggcaggtcacctgaggtcaggagttcgaggccagcctgaccaacatggtgaagccccgtctctactaaaaatacaaaaaattagccgggtattatggtgggtacttgtagtcccagctactcgggagactgaagcaggagaatggtgggaacccaggaggtggaggttgcagtgagccgagatcacgccactacactccagcctgggcgacacagcacgactccatct i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e nomLeu3.chr10 103303337 39 - 106955855 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=1803.000000 s hg38.chr19_GL949748v2_alt 917201 9 + 1064304 aaaaaaaaa s panTro4.chr19 59857326 9 + 63644993 aaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303376 8 - 106955855 -aaaaaaga i nomLeu3.chr10 I 39 I 1 s macFas5.chr19 55733497 6 + 59248254 -aaagaa-- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=290064.000000 s hg38.chr19_GL949748v2_alt 917210 360 + 1064304 aaaaaaa-GTCaagaagcagaggatcaggaaaaacaactaaggggtactaggcttaatacttgggtgacaaaataatctgtacaacaaactcctatgacacacggttacctgtgtaactaacctgtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAACCAAAAAAAA-------------GATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcactttcgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagacaagcctggccaagatggagaaaattccacctctactaaaaacacaagaTTAAgtcattgcactccagcgcctaggtgacagagtgaaact s panTro4.chr19 59857335 361 + 63644993 aaaaaaaaGTCaagaagcagaggatcaggaaaaacaactaaggggtactaggcttaatacttgggtgacaaaataatctgtacaacaaactcctatgacacacagttacctgtgtaactaacctgtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAACCAAAAAAAA-------------GATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcactttcgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagacaagcctagccaagatggagaaaattccacctctactaaaaacacaagaTTAAgtcattgcactccagcacctaggtgacagagtgaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768540 361 + 60714840 AAAAAAA-TTCaagaagcagaggatcaggaaaaacaactaatgggtattaggcttaatacttgggtgacaaaataatctgtaaaacaaactcctatgacacatgtttacctgtgtaactaaccggtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAAACAAAAAAAA------------TGATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcacttttgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagaccagcctggccaagatggagaaaattccgcctctactaaaaacacaagattaagtcattgcactccagcgtctaggtgacagagtgaaact i ponAbe2.chr19 I 442 C 0 s nomLeu3.chr10 103303385 373 - 106955855 aaaaaaa-TTCaagaagcagaggatcaggaaaaacaactaatgggtactaggcctaatacttgggtgacaaaataatctgtacaacaaactcctatgccacacatttacctgtgtaactaacctatacttgtatcTACTTTTTGGTTTGTTTTGGTaacaaaacaaaccaaaaaaaaaaaaaaaaaaaaaGATAGCTGGggccaggcatggtggctcatgcctgtaatcccaacacttttgaagaccgaggcaggcgcatcaccttaggtcaggagttcaagaccagcctggccaagatggagaaaattctgcctctactaaaaatacaagattaagccATTGCACTCCAGCGCCTAGGTGACAGAGTGAAACT i nomLeu3.chr10 I 1 M 100 s macFas5.chr19 55733503 350 + 59248254 aaaaaCA-CTCaagaagcagaggatcaggataaacaactaatggatactaggctcaatacctgggtgataa---aatctgtacaacaaactcccatgacacacgtttacctgtgtaactaacctgcaattgtacctactTTTTGGTTTGCTTTGGTAACAAACCAA---AAAAAAAA-------------GATAGCT-Gggccaggcatggtggttcatgcctgtaatcccagcacttttgaaggccaaggcgggtgcatcaccttaggtcagaagtttgagaccagcctggccaacatggag-aaattccacctctactaaaaacacaagattgcaccactgcactccagcg--tgggtgacagagtgaaatt i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=5856.000000 s hg38.chr19_GL949748v2_alt 917570 11 + 1064304 ctgtctcagaa s panTro4.chr19 59857696 11 + 63644993 ctgtctcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768901 11 + 60714840 ctgtctcaaaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55733853 11 + 59248254 ctgtctcaaaa i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 45899758 164 + 49145316 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=5487.000000 s hg38.chr19_GL949748v2_alt 917581 17 + 1064304 aaaataaaaa-ataaaaA s panTro4.chr19 59857707 17 + 63644993 aaaataaaaa-ataaaaA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768912 18 + 60714840 aaaaaaaaaaGGGGGGGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55733864 17 + 59248254 aaaaaaaaaa-aaaaaaa i macFas5.chr19 C 0 I 27 s calJac3.chr22 3198172 17 - 49145316 AATATTAAAA-ATGTAAA i calJac3.chr22 n 164 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=-819.000000 s hg38.chr19_GL949748v2_alt 917598 2 + 1064304 AG- s panTro4.chr19 59857724 2 + 63644993 AG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768930 2 + 60714840 AG- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 3198189 3 - 49145316 ACT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e macFas5.chr19 55733881 27 + 59248254 I e rheMac3.chr19 60593358 870 + 64156825 I a score=90560.000000 s hg38.chr19_GL949748v2_alt 917600 88 + 1064304 Gggccaggtgcagcggctcatgcctataatcccagcactttggaaggccgaggcaggcaaatcacctgaggtcaggagctcgagatca s panTro4.chr19 59857726 88 + 63644993 Gggccaggtgcagcggctcacgcctataatcccagcactttggaaggccaaggcaggcaaatcacctgaggtcaggagctcgagatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768932 88 + 60714840 Gggccaggtgcagcggctcacgcctataatcccagcactttgggaggccgaggcaggcgaatcccctgaggtcaggagctcgagatca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468668 86 - 59248254 Gggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcggaacac--gaggtcaggagatcgagatca i macFas5.chr19 T 51553 C 0 s papAnu2.chr19 3417681 72 - 51301725 gggccgggtgcggtggctcacgcctgtaatcccaacactttgggaggccgagacggacggatcac--gaggtca-------------- i papAnu2.chr19 I 1199 M 70 s calJac3.chr22 3198192 86 - 49145316 Tggccaggcgcggtggctcaagcctataatcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagacca i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=4645.000000 s hg38.chr19_GL949748v2_alt 917688 8 + 1064304 gcctgggc s panTro4.chr19 59857814 8 + 63644993 gcctgggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769020 8 + 60714840 gcctgggc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468754 8 - 59248254 tcctggct i macFas5.chr19 C 0 C 0 s calJac3.chr22 3198278 8 - 49145316 tcctggtc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3417753 70 - 51301725 M e rheMac3.chr19 60593358 870 + 64156825 I a score=41419.000000 s hg38.chr19_GL949748v2_alt 917696 40 + 1064304 aacacggtgaaaacctgtctgtgctaaaagtac--aaaatta s panTro4.chr19 59857822 40 + 63644993 aacacggtgaaaacctgtctctgctaaaagtac--aaaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769028 40 + 60714840 aacacagtgaaaacctgtctctactaaaaatac--aaaatta i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468762 42 - 59248254 aacacagtgaaaccccgtctctactaaaaacacaaaaaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3417824 42 - 51301725 aacacagtgaaaccccgtctttaataaaaacacaaaaaatta i papAnu2.chr19 M 70 I 1583 s calJac3.chr22 3198286 41 - 49145316 aacatggtgaaaccctgtctctactaaaaatac-aaaaatta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=65453.000000 s hg38.chr19_GL949748v2_alt 917736 65 + 1064304 gccgggcaaggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctt s panTro4.chr19 59857862 65 + 63644993 gccgggcaaggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769068 65 + 60714840 gcctggcaaggtggcacatgcctgtaatcccagctactcaggaggctgaggcagaagaattgctt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468804 65 - 59248254 gctgggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaaccaggagaatggcat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839236 65 + 51301725 gccaggcatggtggttcatgcctgtaatcccagcacttttgaaggccaaggcgggtgcatcacct i papAnu2.chr19 I 5286 I 61 s calJac3.chr22 3198327 65 - 49145316 gctgggcacggtggtgcgtgcctgtagtcccagctcctcaggaggctgaggcaggagaattgctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=18681.000000 s hg38.chr19_GL949748v2_alt 917801 29 + 1064304 gaacctgggaggtggaggatgc-agtgagc s panTro4.chr19 59857927 29 + 63644993 gaacctgggaggtggaggatgc-agcgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769133 29 + 60714840 caacctgggaggcggaggatgc-ggtgagc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468869 30 - 59248254 gaacccgggaggtggaacttgcaagtgagc i macFas5.chr19 C 0 C 0 s calJac3.chr22 3198392 29 - 49145316 gaccccaggaggcggaggttgc-ggtgagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 47839301 61 + 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=51543.000000 s hg38.chr19_GL949748v2_alt 917830 54 + 1064304 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca s panTro4.chr19 59857956 54 + 63644993 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769162 54 + 60714840 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468899 60 - 59248254 cgagattgtgccactgcactccagcactccagcctgggcgtca--agtgagactccatctca i macFas5.chr19 C 0 I 67842 s papAnu2.chr19 47839362 53 + 51301725 caagattgcaccactgcactccagcg--------tgggtgaca-gagtgaaattctgtctca i papAnu2.chr19 I 61 I 2 s calJac3.chr22 3198421 54 - 49145316 cgagatcgagccattgcactccagcc--------tgggtaacaagggtgaaactctgtctca i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 917884 2 + 1064304 cc s panTro4.chr19 59858010 2 + 63644993 cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769216 2 + 60714840 cc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 3198475 0 - 49145316 C e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 47839415 2 + 51301725 I e macFas5.chr19 3468959 67842 - 59248254 I e rheMac3.chr19 60593358 870 + 64156825 I a score=32876.000000 s hg38.chr19_GL949748v2_alt 917886 18 + 1064304 aaaaaaaaaaaaaaaaaa s panTro4.chr19 59858012 18 + 63644993 aaaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769218 18 + 60714840 aaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303861 18 - 106955855 AAAaaaaaaaaaaaaaaa i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 60594228 18 + 64156825 aaagaaaagaaaagaaga i rheMac3.chr19 I 870 C 0 s papAnu2.chr19 47839417 18 + 51301725 aaaaaaagaaagaaaaga i papAnu2.chr19 I 2 I 8 s chlSab2.chr6 47549245 18 + 50890351 aaaagaaagaaaagaaga i chlSab2.chr6 I 1094 C 0 s calJac3.chr22 3198475 14 - 49145316 ----aaaaaaaaaaaagt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e macFas5.chr19 3468959 67842 - 59248254 I a score=7212.000000 s hg38.chr19_GL949748v2_alt 917904 3 + 1064304 aaa s panTro4.chr19 59858030 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769236 3 + 60714840 gac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303879 3 - 106955855 aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594246 3 + 64156825 aaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733908 3 + 59248254 aaa i macFas5.chr19 I 27 C 0 s papAnu2.chr19 47839443 3 + 51301725 aaa i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 47549263 3 + 50890351 aaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3198489 3 - 49145316 aaa i calJac3.chr22 C 0 I 39388 e canFam3.chr1 102627765 1798 + 122678785 I a score=11547.000000 s hg38.chr19_GL949748v2_alt 917907 8 + 1064304 --gaCagctg s panTro4.chr19 59858033 10 + 63644993 aagaCagctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303882 8 - 106955855 --gacagctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594249 8 + 64156825 --catagctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733911 8 + 59248254 --catagctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839446 8 + 51301725 --catagctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549266 8 + 50890351 --gatagctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56769239 0 + 60714840 C e calJac3.chr22 3198492 39388 - 49145316 I a score=100053.000000 s hg38.chr19_GL949748v2_alt 917915 53 + 1064304 gaaaatccccaaatacatggagatgaaacagcacatttccaaatt---------taaaaaac s panTro4.chr19 59858043 53 + 63644993 gaaaatccccaaatacatggagatgaaacagcacatttccaaatt---------taaaaaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303890 53 - 106955855 gaaaatccccaaatacatggagatgaaacagcacatttccaaatT---------TAAAAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594257 56 + 64156825 gaaaatccccaaatccatggagatgaaacaacacatttctaaatT------AAAAAAAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733919 55 + 59248254 gaaaatccccaaatccatggagatgaaacaacacatttctaaatT-------TAAAAAAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839454 55 + 51301725 gaaaatccccaaatCCATGGAGATgaaacaacacatttctaaatt-------aaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549274 62 + 50890351 gaaaatccccaaatccatggagatgaaacaacacatttctaaatTTaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899922 51 + 49145316 gaaaaCCCCCCAAAACATGGAGATGAAACAACACATTTCTATACT-----------TATTTT i calJac3.chr22 I 164 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56769239 0 + 60714840 C a score=814675.000000 s hg38.chr19_GL949748v2_alt 917968 242 + 1064304 aaaagtacaagaagCTTAGTCATCGTTCA-GGGTCTTCCTTGCA-AGATGAGCTTCTACTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACGTGGTCACAAAGAATCCGCACAGAAGAGTCACTCAGGAAGCTTTGTTTCACTTCCAGAAACTTGAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCTGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGAGCCCAGTTCGGAA s panTro4.chr19 59858096 242 + 63644993 aaaagtacaagaagCTTAGTCATGGTTCA-GGGTCTTCCTTGCA-AGATGAGATTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACATGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCCAGAAACTTCAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGAGCCCAGGTCGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769239 234 + 60714840 ---------agaaGCTTAGTCATGGTTCAGGGGTCTTCCTTGCA-AGATGAGCTTCTGCTTACACCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCCAGAAACTTCAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCAAAGAGAGCGAAGATCCTGCCGAGCCCAGTTCGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303943 242 - 106955855 AAAAGTACAGGAAGCTTAGTCACGGTTCA-GGGTCTTCCTTGAA-AGATGGGCTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACGTGGTCACAAAGAATCCGCACAGAAAAGTCGCTCAGGAAGCTTTGTTTCACTTTCAGAAACTTCAGGTTGCTATTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGCGCCCAGTTCGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594313 242 + 64156825 AAAAGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCCTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGGCAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733974 242 + 59248254 AAAAGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCCTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839509 242 + 51301725 aaaagtgcaagaagCTGAGTCATGGTTCA-GGGTCTCCCTTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549336 242 + 50890351 aaaaGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCTTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCACTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899973 242 + 49145316 TAAAGTGCAAGGAGCTTAGTCATGGTTCA-GGATCTTCCCTGCA-AGAGGAGCTTCTCCTTACTCTGCTTTCTGCAGGTGACAGGTGTTACGGACTATGTGGTCACAAAGAACCCGCACGGACGACTCGCTCAGGAAGCTTTGTCTCACTTCCAGAAACTTCAGATTGCTGTTCAAGCTGACGAGAGAGCAGAAATCCTTCCAGACGTGAAGGGACTGAAGATCCTGCCGCGCCCAGTTTGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102629563 243 + 122678785 AAAAATGTAAGGAGCTTGGTTATGCCCTA-GGGGTTTTCATCCAGGGGTTAGCTTCTACTTACACCACTTTCTGAAGATTATGGGTAGCAGAGGTTATTTTTTCACAGAGAATTCTCACAGATGAGGCACTAAGGAAGCTCTGACTGATGTCTAGAAATATCAGGTTTTTATTTGAGTCAAACATGGAACAGAAGTCTATCCAGAAAGGAAGCACGTGTTGATCATTCTGGGACCTGTTGGGAA i canFam3.chr1 I 1798 I 1947 a score=208830.000000 s hg38.chr19_GL949748v2_alt 918210 90 + 1064304 TGGTTAGGTAAGTGCACCTGCAGGAGAACACACGTTCATCTCTTAGGACTAGTACCTGCATGGTGAGATGGGCATCTGCAAACCACAttt s panTro4.chr19 59858338 90 + 63644993 TGGTTAGGTAAGTGCACCTGCAGGAGAACACACGTTCCTCTCTTAGGACTAGTACCTGCATGGCGAGATGGGCGTCTGcaaaccacattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769473 90 + 60714840 TGGTTAGGTAAGTGCACCTGCAGTAGAACACACGTTCATCTCTTATGACTAGTACCTGCATGGTGAGATGGGTGTCTGcaaaccacattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304185 90 - 106955855 TGGTCAGGTAAGTGCACCTGCAAGAGAACACATGTTCATCTCTTATGACTAGTACCTGCATGGCGAGATGGGTGTCTGCAAACCACACtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594555 90 + 64156825 GGGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGGGTCTGcaaaccacattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55734216 90 + 59248254 GCGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGGGTCTGCAAACCACAttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839751 90 + 51301725 GGGTTACGTAGCTGCACCTGCGGGAGGACACACATTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGTGTCTGCAAACCAcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549578 90 + 50890351 GGGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCAGGGGACGGGTGTCTGCAAACCACAttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45900215 73 + 49145316 GGGTGAAGTAACTGTCCCTGCGGGAGCGCACA-GTT---------------GTCACCGCAT-GTGGGATGGGTGACTGCAAACCACtttt i calJac3.chr22 C 0 I 2278 e canFam3.chr1 102629806 1947 + 122678785 I a score=264314.000000 s hg38.chr19_GL949748v2_alt 918300 110 + 1064304 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATTGCATCACATGCTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA s panTro4.chr19 59858428 110 + 63644993 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATTGCATCACATACTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769563 110 + 60714840 caacggcaaaaaccacaattacttttgcaccagcctaaAACAGTGTCGATAGTAAACAATATTGCATCACATACTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304275 108 - 106955855 caatggcaaaaaccacaattacttttgcaccaacctaaA--Agtgtctatagtaaacaatattgcatcacatactttgctacgagtatagatcttaagttttacaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594645 110 + 64156825 cagtggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAGCAATATTGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55734306 110 + 59248254 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAGCAATATTGAATCACATACTGTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i macFas5.chr19 C 0 I 810 s papAnu2.chr19 47839841 110 + 51301725 caatggcaaaaaccacaattacttttgcaccaacctaaaacAGTGTCTATAGTAAGCAATATTGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTtttacaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549668 110 + 50890351 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATGGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I a score=1179.000000 s hg38.chr19_GL949748v2_alt 918410 1 + 1064304 A s panTro4.chr19 59858538 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769673 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304383 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594755 1 + 64156825 A i rheMac3.chr19 C 0 I 1213 s papAnu2.chr19 47839951 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549778 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e macFas5.chr19 55734416 810 + 59248254 I a score=8948.000000 s hg38.chr19_GL949748v2_alt 918411 8 + 1064304 ATAAAATA s panTro4.chr19 59858539 7 + 63644993 -TAAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769674 7 + 60714840 -TAAGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304384 7 - 106955855 -tAAAATA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47839952 8 + 51301725 ataaaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549779 8 + 50890351 ATAAAATA i chlSab2.chr6 C 0 I 732 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e macFas5.chr19 55734416 810 + 59248254 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=4422.000000 s hg38.chr19_GL949748v2_alt 918419 8 + 1064304 ATAGATAA s panTro4.chr19 59858546 8 + 63644993 ATAGATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769681 8 + 60714840 ATAGATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304391 8 - 106955855 ATAGATAA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e chlSab2.chr6 47549787 732 + 50890351 I e papAnu2.chr19 47839960 0 + 51301725 C e macFas5.chr19 55734416 810 + 59248254 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=21077.000000 s hg38.chr19_GL949748v2_alt 918427 20 + 1064304 ggctgagtgaggtggctcat s panTro4.chr19 59858554 20 + 63644993 GCctgagtgaggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769689 20 + 60714840 ggctgagtgaggtggctcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304399 20 - 106955855 ggctgagtgaggtggctcat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735226 20 + 59248254 ggccgggcgcggtggctcac i macFas5.chr19 I 810 C 0 s papAnu2.chr19 47839960 19 + 51301725 -gccaggtgtggtggctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=280811.000000 s hg38.chr19_GL949748v2_alt 918447 245 + 1064304 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-caacttgggctagaaactgaga-cccccatctctac-aaaaaaat--aaaataattaa-ccgggcaaggtggtgcacgcccatagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagatcgcgccactgcactccagcctggggga s panTro4.chr19 59858574 245 + 63644993 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatctcttgagcccaggagtttaagac-cagcctgggctagaaactgaga-cccccatctctcc-aaaaaaat--aaaataattaa-ctgggcaaggtggtgcacgcccgtagtcccagctactggggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagccaagatcacgccactgcactccagcctggggga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769709 244 + 60714840 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-cagcctggacaagaaactgaga-cccccatctctac--aaaacat--aaaataattaa-ccgggcaaggtggtgcacgcccgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagccaagatcatgccactgcactccagactgggcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304419 245 - 106955855 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-cagcctgggaaagaaactgagaccccccatctccac--agaaaat--aaaataattaa-ccgggcaacatggtgcacgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggagcttgcagtgagccaagatcgcgccactgcactccagcctgggcga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735246 233 + 59248254 gcc-----tgtaatcccagcactttgggaggccgaggcgggcggatcac--aaggtcaggagatcgagac-------------cacggtgaaa-cc-ccgtctctactaaaaatacaaaaaaaaattag-ccgggcgcggttgtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839979 215 + 51301725 accctccttggcctctcagcactttgggaggccgaggcgggcagatcac--aaggtcaggagattgagactcatcctggctaacacagtgaaa-cctccgtctctactaaaaatac--aagaaaattagtctgggcgtggtgacgggcgtctgtagtcccagctactcgcgag----------------------------------agagcttgcagtgagcagagat-gcg-cactgcactctagcctgggtga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45902566 228 + 49145316 gcc-----tgtaatcccagcacttt------cagaagcaggga-----cctgaggtcaggag----agac-cagcctggccaacgtgatgaaa-ccccc-tctctat--taataat--acaaaaattag-ctgggcgcggtggctcatgcctgtaatcccagctactaatgaggccggggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcatgccattgcacttcagcctgggtga i calJac3.chr22 I 2278 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=28850.000000 s hg38.chr19_GL949748v2_alt 918692 19 + 1064304 c-agagcgagactccgtctc s panTro4.chr19 59858819 19 + 63644993 c-agagcgagactccgtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769953 19 + 60714840 c-agagcgagactccgtctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304664 19 - 106955855 c-agagcgagactccgtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735479 19 + 59248254 c-agagcgagactccgtctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47840194 18 + 51301725 c-agagc-agactctgtctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45902794 18 + 49145316 ctagagcaaaact--gtctc i calJac3.chr22 C 0 I 7 s canFam3.chr1 102631753 19 + 122678785 C-AAAACAAGGTCTGGTTCC i canFam3.chr1 I 1947 C 0 e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=23841.000000 s hg38.chr19_GL949748v2_alt 918711 11 + 1064304 aaaaataaaaa s panTro4.chr19 59858838 11 + 63644993 aaaaaaaaaaa i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56769972 11 + 60714840 agaaaaaaaaa i ponAbe2.chr19 C 0 I 5 s nomLeu3.chr10 103304683 11 - 106955855 aaaaaaaaaaa i nomLeu3.chr10 C 0 I 5 s macFas5.chr19 55735498 11 + 59248254 aaaaaaaataa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47840212 11 + 51301725 aaaaaaaaaaa i papAnu2.chr19 C 0 M 1271 s chlSab2.chr6 47550519 11 + 50890351 aaaaaaaaaaa i chlSab2.chr6 I 732 C 0 s calJac3.chr22 45902819 11 + 49145316 aaaaaaaaaaa i calJac3.chr22 I 7 I 3 s canFam3.chr1 102631772 7 + 122678785 --AAAGAAA-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60594756 1213 + 64156825 I a score=348909.000000 s hg38.chr19_GL949748v2_alt 918722 211 + 1064304 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-ATGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAATTCTGACAGTAAGCGACAGGGCAAAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTTTCAAATTCAATGTCCAGTTCAAAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT s panTro4.chr19 59858851 211 + 63644993 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-GTGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAATTCTGACAGTAAGTGACAGGGCAAAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTTTCAAATTCAATGTCCAGTTCAAAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56769988 209 + 60714840 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-GTGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAAT--TGACAGTAAGCGACAGGGCAAAGGAGACG--CAGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTCTCAAATTCAATGTCCAGTTCAGAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 103304699 211 - 106955855 aCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCGCGTTGAAC-GTGAAGCT---GGAAGGAAGTCCAGCCAGAGGGAAATTCTGACCGTTAGCGACAGGGCACAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------AATGGGAAAGCA-----------------------GTTCTTACCTCTCAAATTCAATATCCGGTTCAAAACCCACGTAATTCTCCAGGAACACCCCCTTTGCT i nomLeu3.chr10 I 5 C 0 s macFas5.chr19 55735520 181 + 59248254 -------------------aaat-------------taaaaaaataaaaaa---ataaGAAAGTCCAGCCAGAGGGAAATTGTGACCGTCAGCCACAGGGCACAGGAGACG--CCGGCCTCTTCCTAGTGGAGCG---TGG------------------GTTGGGAAAACA-----------------------GTCCTTACCTCTCAAATTCAATGTCTGCTTCGAAATCCACGTAATTCTCCAGGAACACCCCCTTTGCT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 3419449 180 - 51301725 ------------------------------------------------------aaaaaagagtccaaaaAGAGGGAATTCCTGACCCTAAGCCACAGCACATAGGAGGCT--CTGGCCTCTTCCTAAGGGCGCA---TGGGATGAGGCTAAACGACCAGTCGAGTGAAAG-----------------------GTTCCTACCTCTCAGCCTCAGCATTGGATTCAGACGCAGCGACATTCTCCGGGAGCGTCTCCTTTCTT i papAnu2.chr19 I 1583 I 3 s chlSab2.chr6 47550530 205 + 50890351 GCCCCAATTCCTAATTGTCAAATCGCG-TCTCCGTGTTGAACTGTGAAGCT---GGAAGAAAGTCCAGCCAGAGGGAAATTCTGACCGTCAGCCAC-------AGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTCTCAAATTCAATGTCTGGTTCGATATCCACGTAATTCTCCAGGAACACCCCCTTTGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45902833 207 + 49145316 aaCCCAATTCCTAATTGACAAATCGTA-TCTGTGTGTTGAAC-ATGAAGC-------AGGAAGACCAGCCAGAGGGAAATTCTGACCTTAAGCTACAAGGCACAGGAGACA--CTGGCCTCCTCCTGGTGGAACG---TGG------------------GATGGGAAAGTC-----------------------GTTCTTACCTCTCTAACTCCAAGTCCGGTTCAAGGTCCACGTAATTCTCCAGGAACACCCCCTTTGCT i calJac3.chr22 I 3 C 0 s canFam3.chr1 102631779 243 + 122678785 GATCCCATCCCTAATCCGAACATTGTGTTCCCCACCTTGAAG-AGCAAGCTAGCAGAAGAAATTCTGGCAAGAAGAAAATTCTGATCCTATGCCAAGGGAGCGGGGGGACACTCTGCCCTGTTTCTAACGCAGGGGATGAG------------------GCTGAAAAAGCAAGCTAACAGAGTGAACAGTGAGGATTCTTACCGGTCAGCCTGGTCCTCTGATTCTGACACAGCATCATTCTCCAGAAACATCCCCTTTTCT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60594756 1213 + 64156825 I a score=125033.000000 s hg38.chr19_GL949748v2_alt 918933 38 + 1064304 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT s panTro4.chr19 59859062 38 + 63644993 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770197 38 + 60714840 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304910 38 - 106955855 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60595969 38 + 64156825 ACCTGCAGTGACATTTTCTGCAAGTTTTGACAGTGCTT i rheMac3.chr19 I 1213 I 49 s macFas5.chr19 55735701 38 + 59248254 ATCTGCAGTGAGACTTTCTCCAAGTCTCGACAATGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419632 38 - 51301725 ACCTGCAGTGACATTTTCTCCAAGTTTGGACAGTGCTT i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47550735 38 + 50890351 ACCTGCAGTGAGACTTTCTCCAAGTCTGGACACTGCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903040 38 + 49145316 ACCTGCAGCGAGAGTTTCTCCAAGTCTGGACAGTGCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632022 38 + 122678785 ATCTGCAGCCACATTTTCTGCAAGCTTTCACAATGCTT i canFam3.chr1 C 0 C 0 a score=88309.000000 s hg38.chr19_GL949748v2_alt 918971 52 + 1064304 CAGGCTGAAGGAACAATGCATCACTTCAGAAGTATTTGTCAGGTGAATAGAA s panTro4.chr19 59859100 52 + 63644993 CAGGCTGAAGGAACAATGCCTCACTTCAGAAGTATTTGTCAGGTGAATAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770235 52 + 60714840 CAGGCTGAAGGAACAATGCATCACTTCAGAAGTATTTGTCAAGTGAATAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304948 52 - 106955855 CAGGCTGAAGGAACACTGCATCATTTCAGAAATATTTGTCAAGTGAACAGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735739 52 + 59248254 CAGGCTGAAGGAACAGTGCATCATTTCAGAAGTATTTGTCAAGTTAATAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419670 49 - 51301725 GAAGCAGAATGATGACGGCGCAATGTCTACTGCATTT---AAGTGCAGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550773 52 + 50890351 CAGGCTGAAGGAACAGTGCATGATTTCAGAAGTATTTGCCAACTTAATAGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903078 52 + 49145316 CAGGCTGAAATAACACTGCACCATCTCAGACTTACTTGTCAAGTGAACAGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632060 52 + 122678785 GAGGCAAAAGGATGCATGCATGATGTCTGAGGTATCTTTGAAAACCAGGGAC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60596007 49 + 64156825 I a score=209419.000000 s hg38.chr19_GL949748v2_alt 919023 64 + 1064304 ATTTCCTTGAACGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC s panTro4.chr19 59859152 64 + 63644993 ATTTCCTTCAACGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770287 64 + 60714840 ATTTCCTTGAAAGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305000 64 - 106955855 ATTTCCTTGAACGGGGCCACTACGACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60596056 64 + 64156825 ATTTCTTTGAACTGAGCCATCACCTCCTTCACCAGCTCGTCCTCCTGAGACTCGTACAGACAGC i rheMac3.chr19 I 49 I 55 s macFas5.chr19 55735791 64 + 59248254 ATTTTCTTGAGCGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCGTACAGGCAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419719 64 - 51301725 ATTTCTTTGAACTGAGCCATCACCTCCTTCACCAGCTCGTCCTCCTGAGACTCGTACAGACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550825 64 + 50890351 ATTTTCTTGAGCGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCGTACAGGCAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903130 64 + 49145316 ATTTCCCTGAACGGGGCCATCACCGCCTTCGTCAGCTCCCCCTCCTGAGACTCATACAGGCAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632112 64 + 122678785 ACTTCTGTCACCTGGACCATGGCTTCCTTCACAAGCTGCTCCTCCTGGGATTCATAGAGACAGT i canFam3.chr1 C 0 C 0 a score=95886.000000 s hg38.chr19_GL949748v2_alt 919087 58 + 1064304 CCAAGACCTCCTTCAGGTCGGTCAC---GGATAAGGGCTTATTTGCATGAAGATGTGCTTT s panTro4.chr19 59859216 58 + 63644993 CCAAGACCTCCCTCAGGTCGGTCAC---GGATAAGGACTTATTTGCATGAAGATGTGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770351 58 + 60714840 CCAAGACTTCCTTCAGGTCGGTCAT---GGATAAGGGCTTATTTGCATGAAGATGTGCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305064 58 - 106955855 ACAAGACCTCCTTCAGGTCGGTCAT---GGATATGGACTTATTTGCATGAAGATGTGCTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735855 58 + 59248254 ACAAGACCTCCTTCAGGTCTGTCAT---GGATAAGGGCTTATCGGCATGAAGACTGGCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419783 55 - 51301725 AGAGGAGCTCCTTCAGGTCCGCCAC---CGTGGAATGTCCATTCTTACGACTTATGTC--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550889 58 + 50890351 ACAAGACCTCCTTCAGGTCTGTCAT---GGATAAGGGCTTATTGGCATGAAGATTGGCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903194 58 + 49145316 ACAAGAGCTCCCTCAGGCCTGCCAT---CGACGACGGCTTCTTTACGTGAAGATTCGCTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632176 61 + 122678785 GCAAAGTCTCCTTCGTGTCTGTCACCGAGGAGAAGGGTCTGTTCTCAGGAGACCCTACCCT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60596120 55 + 64156825 I a score=175702.000000 s hg38.chr19_GL949748v2_alt 919145 52 + 1064304 GCATTGCAGCAATTCCTGTTTGATGTCCGGTGACATCCGGCAGCCAAAAGTG s panTro4.chr19 59859274 52 + 63644993 GCACCGCAGCAATTCCTGTTTGATGTCCGGTGACATCCGGCAGCCAAAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770409 52 + 60714840 GCATCGCAGTAATTCCTGTTTGATGTCTGGTGATATCCGGCAGCCAAAAGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305122 52 - 106955855 GCATCGCAGCAACTCCTGTTTGATGTCTGGTGACATCTGGCAGCCAAAAGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60596175 52 + 64156825 GCATCGCAGCAATTCCTGTTTGATCTCTGGTGACATCCGCCAGCCAAAGGTG i rheMac3.chr19 I 55 C 0 s macFas5.chr19 55735913 52 + 59248254 GCATCGCAGCAATTCCTGTTTGATCTCCGGTGACATCTGGCAGCCAAAAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419838 52 - 51301725 GCATCGCAGCAATTCCTGTTTGATCTCTGGTGACATCCGGCAGCCAAAGGTG i papAnu2.chr19 C 0 I 48039 s chlSab2.chr6 47550947 52 + 50890351 GCATCGCAGTAATTCCTGTTTGATCTCCGGTGACATCCGGCAGCCAAAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903252 52 + 49145316 GCACCGCAGCAGTTCCTGTTTGATCTCCCGTGACATCACGCAGCCGAAAGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632237 52 + 122678785 GCATTCCAGCAGTTCCTGCTTGACCTTGGTGGACACCAGGCAGCCAAAAGTC i canFam3.chr1 C 0 C 0 a score=3698472.000000 s hg38.chr19_GL949748v2_alt 919197 1051 + 1064304 GCCTCCAACTCCTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTTCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGTACGTCCCCGATGTCCCAGGCGTGG-CCGTCCCT--------GTCCTCCCCCTCCTCCTTCTCCAGGGCGTAGAACAGGGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGGAGGCTCAGCGTCCGCAGCGCGCCCCGCAGCTGTG------------CGCCCTGCGGG------AACCGGCTGCAGAGGAAACGCAGGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACAATCCAGCACACCGCGGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATTAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTACGTAGATCGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAAGGCTGCCCTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGAGCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG s panTro4.chr19 59859326 1051 + 63644993 GCCTCCAACTCCTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTTCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGTACGTCCCCAATGTCCGAGGTGTGG-CCGTCCCT--------GTCCTCCTCCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGCGAAAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGGAGGCTCAGCGTCCGCAGCGCGCCCCGCAGCTGTG------------CGCCCTGCGGG------AACCGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATTAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTACGTAGATCGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAGGGCTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770461 1048 + 60714840 GCCTCCAACTCGTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGGATCAGGTCGGGGTTCCTGACTCTTTCTTCTCCGGAAAGCAGCTTCTGTATGTCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCT---CCTCCTCCTTCTCCAGGGCGTAGAACAGCCCAGCGAAAAACTGCTGGACGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGAAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTTGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGAAAGCTCAGCGTCCGCAGCGCGCCCTGCAGCTGTG------------CGCCCTGTGGG------AACCGGCTGCAGAGGAAGCGCAAGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGGGCCGACCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTATGTAGATTGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAGGGCGGCCTTGGGTAACATATACCTGTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCTTCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAACTCAGGCCAGTCTTTGGAGATTAGCTCTGCAAAACTGCACGGGCCCATGTGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305174 1051 - 106955855 GCCTCCAGCTCCTTGGCTCTCTTCTCATTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTCCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCTCTTCCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGCGAAAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGTCTCTGTCCTGGCGGAGGATGTGTCCGTCCAGGAACGGGCGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAGCACAGACATCTGCGCCCACAGCCCCTGCGCGGCCAGGAGGCTCAGCTTCCGCAGCGCGCCCCGCAGCTGTC------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCGGGTGAGGCAAGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCCGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTATGTAGATTGGCTGCTGCGCCAGGAGCTGTAGATCCCTCAGTACCCTGGGCCGCGTGGTGACCAGCAGGGCGGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGAACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG i nomLeu3.chr10 C 0 M 207 s rheMac3.chr19 60596227 1051 + 64156825 GCCTCCAACTCCTTGACTCTCTTCTCATTAGCCAGGCCGAACAAGAAGCGTCCTGCCTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGG-CCGTCCCT--------GtcctcctcctcctcctcctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGCGACTCCGTCCTGGCGGAGGATGTCTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACTCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACAGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55735965 1051 + 59248254 GCCTCCAACTCCTTGACTCTCTTCTCATTAGCCAGGCCGAACAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGA-CCGTCCCT--------GtcctcctcctcctcctcctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGCGACTCCGTCCTGGCGGAGGATGTTTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACCCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGGCAGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47841511 1048 + 51301725 GCCTCCAACTCCTTGACTCTC-TCTCATTAG-CAGGCCGAATAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGGCCCgtccct--------gtcctcctcctcct--ttctgcaGGGCGTAGAACAGCGCAGTGAGAAACtgctggaagctgaggtggatgaaGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCGGCCCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACCCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCAGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGTGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAACTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCGAAGTGTCTCAGGAAATAGGCCCTCCTGTCCGACTCCAGGAACCCCTCCACCCTTATGTAGGTGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCGTCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCGAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACCATCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i papAnu2.chr19 M 1271 C 0 s chlSab2.chr6 47550999 1051 + 50890351 GCCTCCAACTCCTTCACTCTCTTCTCATTAGCCAGGCCGAATAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGG-CCGTCCCT--------GtcctcctcctcctccttctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCTTTTGGAGACTCTGTCCTGGTGGAGGATGTCTCTGTCCAGGAACGGACGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCTGTGGAGCACGGACATCTGCGCCCACAAACTCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGAGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAACGCAGGAACAGCTCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCATTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCATACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAACTCAAAGGCACGCATGGCTTGGTCCTCCTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCTTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAAGAGGACCGGCACCGGCTTCTGCTGCTTCCAGTCCCCGCATATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAAGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCGCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGACCAGTCCAGCATACACTTTTTGGCCAGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903304 1048 + 49145316 GTCTCCAACTCCGCGGCTCTCTTCTCGTTGGCAAGGCCGAATAAGAAGTGTCCCGCTTGGATCAGGTCGGGGTTCTGGACTCTTTCTTCTCCAGAAAGCAGCCTCTGCACATCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCT---CCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGTGAAAAACTGCTGGAAGCTGAGGTGGAGGAAGGAGTAGCAGTCTTTAGAGTCTCTATCCTGGCGGAGGATGCCTCTGTCCAGGAACGGGCGGAGGTCGGACTCCTGCACCCCGAAGCTCTCCAGGTCCTCTCTGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCAGCCAGGATGCTCAGCGCCCGCAGCGTGCCCCCGAGCTGTG------------CACCCTTCGGG------AAGCGGCTGCAGAGAAAGTGCAGGAACAGCCCCGTGCAGGTGTGGCAGGTGGTGGCCGGGTCCTCCCCATTCTCCATCTGCAGCTTCAGACTCGTGCACACCATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTTCTCATCAGCTCAAAGGCACGCGTGGCTTGGTCCTCCTCTCCAAAGTGTGTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTTCTCGGCCAGGAGCTGCAGGTCCCTCAGGGACCTGGGCCGTGTGGTGACCAGCAGGGCGGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCGGCTTCAGCCAGTCCCCGCAGATGTCGTAGATCAGCG------CCCCGGGGGGCACTCTCAGCTCATCGAGGCCGTCGACCACAATCAGGATTCTCTGTGCTTGGGCGAGGATGTCTGGAATGTCATCCTGCAATTCCGGCTGGTCTCTGGCGATCAGCTCTGCAAAACTGCACGGGCCCAGCCGGCTGAGCCCCTTGCAGCTGAGGTAGAAAGCGTACCTGGCCTTTGGGCCGAGGTTGTAGTCTTTCCAGTCCAGCATACACTTCTTGGCCAGCG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632289 1081 + 122678785 ATCCCCAGCTCCCTGGCCCTCTTTTCATTGGTGAGGCCAAATAGGAAGTGCCCCACGGGGGCTAGGTAGGGGTTCTTGAGTCCTTCTTCCTTGGAGAGGAGCCTCTGCACATTCCCAGCATCCCAGCTAGGG-C--TTCCTGCTGGAAGGTCTTGGTGGTCCTGGCTCCCCAGAATGTAGAGGGCAGCGGCCAGGAACTGCTGGACACTCAGGTGGAGGAAGCAGTAGCAGCCCTCACAGTCTCTGCTCTTCTGGAGGATATTCCTGTTCAGGAAAGGGTGCAGGTCAGACTCATGCACACCCAGCCTGAGCAGGTCATGTCCATCAAACACTGAGGTCTGTGTCCACACGCCCTCAGTGGCCAGCAGGCACAGAGCGTGCAGAGTAGACCTGAGGTGCAGCCCCAGACAGCTGCCCTGCGCGGGCGCAAACTGGCTGCAGAGGAAACGCAGCAACAACGATGTGGTGGTCTGGCAGGTGGGGCCAGGGTCCTCACCCTCGTCCATCTGCAGCTTCAGGCAGGTGCACACCATCCAGCACACAGCGGGTGCCGCGCCCATTTGGAACAGCGTTGCATTGCTCTTCATCAGGTGGAAAGCACGCAGCGCCTGAGCCTCCTCTCCAAAGTGTCTCAGGAAATACGCCTTCCTGTCACACTCTGAGAGCCCCTCGATCTCCACGAAGAGTGGCTGCTCCACCATGAGCCGCAGCTCCCTTAGGGCCTCGGGCCGTGTGGTGACCAGTAGGGCGGCCGTGGGTAAGAGCTTTCTCTTCAGTAAGCTCCCCAGGAGGGTGGACGCAGGCCTCTGTGTCTTCCAGTCCACACACAGGTCGTGCACCAGCGCCTCCACCCCTGAGGGCACGCGCAGCTCCTCGAAAGCATCAATGACAAACAGGAGTTTCTGTGCCTGGGTCAGGACCTGTGCAAGGGCATCCTGCAGGTCTGGGGCACTCTGGGCCAGGAGTTCTATGAAGGAGCACATCCCCTTGCGGCTGAGCGCCTTGCAGCTGAGATAGAAGGCAGTGGGGCAGGTCTGTGCAAGGCTGTCCTCTGTCCAGTCCAGCATGCACTTCTTGGCCAGAG i canFam3.chr1 C 0 C 0 a score=163138.000000 s hg38.chr19_GL949748v2_alt 920248 45 + 1064304 TGGTTTTCCCCACGCCTGCGGGGCCGTGCAGCACCACCGTGTAAG s panTro4.chr19 59860377 45 + 63644993 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACCGTGTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771509 45 + 60714840 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACTGTGTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3617664 44 + 106955855 TGGTTTT-CCCAAGGCTGCAGGACCGTGCAGCACCACCGTGTAGG i nomLeu3.chr10 n 0 I 31972 s rheMac3.chr19 60597278 45 + 64156825 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737016 45 + 59248254 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842559 45 + 51301725 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552050 45 + 50890351 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904352 45 + 49145316 TGGTTTTCCCCACACCCGCAGGACCGTGCAGAACCACCGTGTAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633370 45 + 122678785 TGGTCTTCCCAACGCCCGCAGGACCATGCAGCACCACCGTGTGTG i canFam3.chr1 C 0 C 0 a score=388882.000000 s hg38.chr19_GL949748v2_alt 920293 165 + 1064304 GTGTTAGCTTCCTGGGTGTTCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCAGAGTGACGTCGTCATGGAAATTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGACTGTTTCTCCATTGAATTTCTCCATCCTTCCTTTTCACCTGCAG s panTro4.chr19 59860422 165 + 63644993 GTGTTAGCTTCCCGGGTGTTCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCAGAGTGACGGCGTCATGGAAATTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CGAAGATTGTTTCTCCATTGAATTTCTCCATCCTTCCTTTTCACCTACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771554 165 + 60714840 GTGTTAGCTTCCTGGGTGTTATGGGATTCAAGAATGGAATGAACCGTAGGTTTCTCAGAGTGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTCCATTGAATTTCTCCGTCCTTCCTTTACACCTGCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60597323 165 + 64156825 GTGTTAGCTTCCTCGGTGTGCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCTGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCACTGAATTTCTCTGTCCCTCCTTTTCACCTGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737061 165 + 59248254 GTGTTAGCTTCCTCGGTGTGCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCTGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCACTGAATTTCTCTGTCCCTCCTTTTCACCTGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842604 165 + 51301725 GTGTTAGCTTCCCGGGTGTTCTGGGATTCAAGAATGGAATGAACCGCTGGTGTCTCAGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCATTGAATTTCTCCGTCCCTCCTTTTCACCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552095 165 + 50890351 GTGTTAGCTTCCCGGGTGTTCTGGCATTCAAGAATGGAATGAACCGTTGGTTTCTCCGAATGACGTCGTCATGGAAACTGTCAGTGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCATTGAGTTTCTCCGTCCCTCCTTTTCACCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904397 165 + 49145316 GGGCTGGCTGCGTGGGTCTTCTGGGATTCAAGAATGGAATGAACCTTTGGTTTCTCTGAGTGACATGGTCGTGGAAATTGTCACTGTCTCCTCGCCAAAAAGTGTTCCGCGAGAC---CAAAGACTGTTCGTCAGTCACGTTTCTCCATCCTTCCTTCTCACCTGCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633415 165 + 122678785 GAAATGGTCCTGCAAGCATTTTAGGATTACAGAATGGGATCAGTGTCTCATATTTCTGGGTGACAGTG---TGAATGTTTTCACTGGCTCCAGGCCAAAAGTTCTTCTTCCACATTTGCTGGACCTTCTCTTTCAATATACTTATATACTTATCTTGTTTACCTTCAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3617708 31972 + 106955855 I a score=20106.000000 s hg38.chr19_GL949748v2_alt 920458 5 + 1064304 TGACA s panTro4.chr19 59860587 5 + 63644993 TGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771719 5 + 60714840 TGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306436 5 - 106955855 TGACA i nomLeu3.chr10 M 207 C 0 s rheMac3.chr19 60597488 5 + 64156825 TGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737226 5 + 59248254 TGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842769 5 + 51301725 TGACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552260 5 + 50890351 TGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904562 5 + 49145316 TGACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633580 5 + 122678785 TGATA i canFam3.chr1 C 0 I 30 a score=161631.000000 s hg38.chr19_GL949748v2_alt 920463 61 + 1064304 GCCCATAGGACAGTTGAGGTTGATGATGATGATTTTCTG--AATTATTTTGTCAAGTACCAGA s panTro4.chr19 59860592 63 + 63644993 GCCCATAGGACAGTTGAGGTTGATGATGATGCTCTTCTGAAAATTACTTAGTCAAGTACCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771724 63 + 60714840 GCCCATAGGACAGTTGAGGCTGATGATGATGCTCTTCTGAAAATTACTTTGTCAAGTACCAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306441 63 - 106955855 GCCCATAGGACAGTTGAGGCTGATGATGATGCTCTTCTGAAAATTACCTTGTCAAGTACCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597493 63 + 64156825 GCCCACAGGACAGTTCAGGTTGATGATTACACTCTTCTGAAAATAACTTTGCCAAGTACCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737231 63 + 59248254 GCCCACAGGACAGTTCAGGTTGATGATTACACTCTTCTGAAAATAACTTTGCCAAGTACCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842774 63 + 51301725 GCCCATAGGACAGTCGAGGTTGATGATTACGCTCTTCTAAAAATAACTTTGCCAAGTACCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552265 63 + 50890351 GCCCATAGGACAGTTGAGGTTGATGATTACACTCTTCTGAAAATTACTTTGCCAAGTACCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904567 62 + 49145316 GACCACAGGACAGGTGAGGTTGGGGA-GATATTCATCTGAAAATGACTGTGTAAAGTACCAGA i calJac3.chr22 C 0 I 1893 e canFam3.chr1 102633585 30 + 122678785 I a score=39240.000000 s hg38.chr19_GL949748v2_alt 920524 16 + 1064304 AATGAGggccaggcac s panTro4.chr19 59860655 16 + 63644993 AATGAGggccaggcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771787 16 + 60714840 AATGAGggccaggcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306504 16 - 106955855 AATGAGggccaggcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597556 16 + 64156825 AATGAGggccgggtac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737294 16 + 59248254 AATGAGggccgggtac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842837 16 + 51301725 AATgagggccgggtac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552328 16 + 50890351 AATGAGggccgggtac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102633585 30 + 122678785 I e calJac3.chr22 45904629 1893 + 49145316 I a score=10476.000000 s hg38.chr19_GL949748v2_alt 920540 3 + 1064304 ggt s panTro4.chr19 59860671 3 + 63644993 ggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771803 3 + 60714840 ggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306520 3 - 106955855 ggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597572 3 + 64156825 ggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737310 3 + 59248254 ggt i macFas5.chr19 C 0 I 541 s papAnu2.chr19 47842853 3 + 51301725 ggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552344 3 + 50890351 ggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3237880 3 - 49145316 ggt i calJac3.chr22 I 39388 C 0 e canFam3.chr1 102633585 30 + 122678785 I a score=785473.000000 s hg38.chr19_GL949748v2_alt 920543 267 + 1064304 gtctcatgcttgtaatcccggcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaatacaaaacattagctgggggtagtggcggccgcctgtaatcccggctactcaggaggctgaggc-agagaattgcttgaacccgggaggcagaggttgcaatgagcagagacggagccactacactccagcctgggctac-agagcaagattccgtc s panTro4.chr19 59860674 267 + 63644993 gtctcatgcttgtaatcccggcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaatacaaaacattagctgggggtagtggcggccgcctgtaatcccagctactcaggaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagacggagccactgcactccagcctgggctac-agagcaagattccatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771806 267 + 60714840 ggctcatgcttgtaatcccagcactttgggaggccgaggtgggtggatcacttgagatcaggagttccagaccagcctggccaagatagtgaaatcccatctctactaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaggaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcaaagacggagccactgcactccagcctgggctac-agagcaagattccgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306523 266 - 106955855 ggctcatgcttgtaatcccagcactttgggaggccgaggtgggtggatcacttaaggtcagaagttcaagaccagcctggccaagatagtgaaatcccatctctactaaaaatac-aaacattagctgggggtagcggcgggcgcctgtaatcccagctactcaggaggctgagtc-acagaattgcttgaacccaggaggcggaggttgcaatgagcagagacggagccactgcactccagcctgggctac-agagcaagatcccgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597575 267 + 64156825 ggctcacgcctgtaatcccagcacttcgggaggccgaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctaccaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagatggaaccactgcacgccagcctgggggac-agagcaagattccgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737854 267 + 59248254 ggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcccctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagatggaaccactgcacgccagcctgggggac-agagcaagattccgtc i macFas5.chr19 I 541 C 0 s papAnu2.chr19 47842856 267 + 51301725 ggctcacgcctgtaatcccagcacttcaggaggccgaggtgggtggatcacttgaggtcaggagttcaaaaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggtgggggttgcaatgagcagagatggaaccactgcactccagcctgggggac-agagcaagattctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552347 267 + 50890351 ggctcacgcctgtaatcccagcacttcgggaggcccaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcacctgtaatgccagctactcaagaggctgaggc-agagaattgcttgaagccgggaggtagaggttgcaataagcagagatggaaccactgcactccagcctgggagac-agagcaagattctgtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3237883 267 - 49145316 ggctcacgccgataatcccagcactttgggaggctgaggcgggtggatcac--gaggtcaagagattgagaccatcctggttgacatggtgaaaccccgtctctactaaacatacaaaaaattagctgggcacggtggcgcatgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcctgggtgacaagagcgaaactccgtc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102633585 30 + 122678785 I a score=2101.000000 s hg38.chr19_GL949748v2_alt 920810 3 + 1064304 tc----------a s panTro4.chr19 59860941 3 + 63644993 tc----------a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772073 3 + 60714840 tc----------a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306789 3 - 106955855 tc----------a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597842 3 + 64156825 tc----------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738121 3 + 59248254 tc----------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843123 2 + 51301725 tc----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552614 13 + 50890351 tcaaaaaaagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3238150 3 - 49145316 tc----------a i calJac3.chr22 C 0 T 27878 s canFam3.chr1 102633615 3 + 122678785 TC----------A i canFam3.chr1 I 30 C 0 a score=575906.000000 s hg38.chr19_GL949748v2_alt 920813 204 + 1064304 ----aaaaaaaaaaaaaC--TACCAGAAATGAATAAAACCAGGAAGAAGTGATGCACCTTGCATGCTCTCAAACACCAAACTCAT----GACCATAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTCAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGATGTAAGCCTG s panTro4.chr19 59860944 201 + 63644993 ----aaaaaaaaaaaa-----gccagaaatgaataaaaCCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCAAACTCAT----GACCACAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTCAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGATGTAAGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772076 200 + 60714840 ----aaaaaaaaaGTA------CCAGAAATGAATAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACATCAAACTCAT----GACCACAGGACTGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTTCCAGCTCAGGATTATCTGTTTCTTGCACCTGTCCATACTCTGTAAAATAC---TTAGATGTAAGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306792 195 - 106955855 ----aaaaaaaaaaaG----TACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCT-------TCTCAAACACCCAACTCAT----GACCACAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTGAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGACGTAAGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597845 206 + 64156825 ----aaaaaaaaaaaaaaaaTACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACAAGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738124 206 + 59248254 ----aaaaaaaaaaaaaaaaaaCCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACAAGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843125 206 + 51301725 ----aaaaaaaaaaaaaaaataccagaaatgaagaaaaccaggaagaaatgatGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACACGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552627 206 + 50890351 ----aaaaaaaaaaaaaaaGTACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACACGACCATATTTACCCACCTGGCTTCACTAACTCTGAGTAGTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45906522 196 + 49145316 ------AAGAAAACACGAATCACT--AAATGAAGAAAACCAGGAAGAAGTGATGCGCCTTGCACCTTCCCAAACGCCGAAGTCGC----GACGAGAC-----TGTTCACCCACCTGGCTTTGCTGACTCCAAGTCTTCTTCTAAGTCTCCCAGCTCAGGGTTATCTACTTCTTCCATCTGTCTGTCCTCTGTAAAATAC---ACAGACG-GAGCCTG i calJac3.chr22 I 1893 T 1914 s canFam3.chr1 102633618 203 + 122678785 TTAGGAAAAAAAAATACCTGTGTCAAGTAAGAACATGATAATAGAGAAGTTATCAA------GAACTACCTGACACTAAGCTCATCCAGGAAGATAGGA-------TACAGACCTGGCTTTTCTCCTTTCAAACCTTCCTTTGCTTCTTCTGGATTTGTGACATCTTCTTCCTGTACTTGTGTAAATGCTGCAAAATACAAATTAAA-GTGAGCATG i canFam3.chr1 C 0 C 0 a score=94449.000000 s hg38.chr19_GL949748v2_alt 921017 31 + 1064304 ACACAGTAATTTACACTTCGTAAATCAGACA s panTro4.chr19 59861145 31 + 63644993 ACACAGTAATTTACACTTCGTAAATCAGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772276 31 + 60714840 ACACAGTAATTTACACTTCGTAAATCAGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306987 31 - 106955855 ACACAGTAATTTACACTTCGTAAATCAGACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598051 31 + 64156825 ACACAGCAATTTGCACTGCGTAAATCAGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738330 31 + 59248254 ACACAGTAATTTGCACTGCGTAAATCAGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843331 31 + 51301725 ACACAGCAATTTGCACTGCGTAAATCAgaca i papAnu2.chr19 C 0 I 540 s chlSab2.chr6 47552833 31 + 50890351 ACACAGCAATTTGCACTGCGTAAATCAGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904804 31 + 49145316 TCATGGTCATTTGTACTTCCTGAATCAGGCA i calJac3.chr22 T 1914 C 0 s canFam3.chr1 102633821 31 + 122678785 ACACAAAAATGTGAATTTCTTTTATCAGAGA i canFam3.chr1 C 0 C 0 a score=4095.000000 s hg38.chr19_GL949748v2_alt 921048 1 + 1064304 T s panTro4.chr19 59861176 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772307 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307018 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598082 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738361 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843902 1 + 51301725 T i papAnu2.chr19 I 540 C 0 s chlSab2.chr6 47552864 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904835 1 + 49145316 T i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633852 1 + 122678785 T i canFam3.chr1 C 0 I 3195 a score=49715.000000 s hg38.chr19_GL949748v2_alt 921049 19 + 1064304 TATTGTACATAAAGTGTCA s panTro4.chr19 59861177 19 + 63644993 TATTGTACATAAAGTGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772308 19 + 60714840 TATTGTACATAAAGTGTCa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307019 19 - 106955855 TATTGTACATAAAGCGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598083 19 + 64156825 TATTATGCATAAAGTGTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738362 19 + 59248254 TATTATACATAAAGTGTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843903 19 + 51301725 TATTATACATAAAGTGTca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552865 19 + 50890351 TATTATACATAAAGTGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904836 19 + 49145316 TGTAGAAAAGAAAGCATCA i calJac3.chr22 C 0 I 4633 e canFam3.chr1 102633853 3195 + 122678785 I a score=565980.000000 s hg38.chr19_GL949748v2_alt 921068 261 + 1064304 gccaggcatggtggctcatgcctgtaatcacagcactttggaaggctgaggtgggcggatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-----aaaaaaaaa-aaaattagccaggtgtggtgaaacacgcctgtaatcccagctactccggaggctgagataggagaatcacttgaacccagaggcggaggttgcagtgagcccagatctcgccactgcactccagcct s panTro4.chr19 59861196 260 + 63644993 gccaggcatggtggctcatgcctgtaatcacagcactttggaaggctgaggtgggcagatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac------aaaaaaaa-aaaattagccaggtgtggtggaacacgcctgtaatcccagctactccggaggctgagataggagaatcacttgaacccagaggcgtaggttgcagtgagcccagatctcaccactgcactccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772327 247 + 60714840 gccaggcatggtggctcacgcctgtaatcacagcactttggaaggctgaggtgggcggatcacaaggtcaggacatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-------aaaaaaa-aaaattagccaagtgtggtggcacacgcctgtaatcccagctactccagaggctgagataggagaatcactt-aacccagaggcagaggttgcagtgagcacagatctcaccactg----------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307038 247 - 106955855 gccaggcatggtggctcacgcctgtaatcacagcactttggaaggctgaggtgggtggatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-------aaaaaaa-aaaattagccaggtgtggtggcacacacctgtaat-ccagctactcgggaggctgagataggaaagtcgcttgaacccagaggcggaggttgcagtgagcccagatctcaccactg----------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598102 266 + 64156825 gctgggcgtggcggctcacgcctgtaatcccagcactttgagaggctgaggtgggcaaatcacaaggtcaggagctcaagatcagcctggccaatgtggcaaaaccccatctctactaaaaataccaaaaaaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagataggagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactgcactccagcct i rheMac3.chr19 C 0 I 1440 s macFas5.chr19 55738381 252 + 59248254 gccgggcgtggcggctcacgcctgtaatcccagcactttgagaggctgaggtgggcaaatcacaaggtcaggagctcaagaccagcctggccaatgtggcaaaaccccatctctactaaaaatacc---aaaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagataggagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactg----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843922 256 + 51301725 gccgggcgcggcggctcacgcctgtaatcccaacactttggaaggctgaggtgggcagatcacaaggtcaggaactcaagaccagcctggccaacatggcaaaaccccatctctactaaaaataccaaaaaaaaaaaaataaaaaaagccaggtatgatggcacaggcctgtaatcccagctactcgggaggccgagatagaagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactg----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552884 262 + 50890351 gccaggcgcggcggctcatgcctgtaatcccagcactttgggaggctgaggtgggcaaatcacaaggtcaggagctcaagaccagcctggccaatgtggcaaaaccccatctctactaaaaatacc----aaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagatagaagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactgcactccagcct i chlSab2.chr6 C 0 I 1475 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I a score=50840.000000 s hg38.chr19_GL949748v2_alt 921329 46 + 1064304 tacactccagcctgggcgacagaacgagactccatctcaaaaaaaa s panTro4.chr19 59861456 40 + 63644993 tacactccagcctgggcgacagagcgagactccatctc------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772574 44 + 60714840 --cactccagcctgggcgacagagcgagactccatctcaaaaaaaa i ponAbe2.chr19 C 0 I 2071 s nomLeu3.chr10 103307285 44 - 106955855 --cactccagcctgggcgacagagcgagactccatctcaaaagaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738633 44 + 59248254 --cactccagcctgagtgacagagcgagactctgtctcaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47844178 44 + 51301725 --cactccagcctgggcaacagagtgagaccctgtctcaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1365.000000 s hg38.chr19_GL949748v2_alt 921375 1 + 1064304 a s panTro4.chr19 59861496 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774689 1 + 60714840 a i ponAbe2.chr19 I 2071 C 0 s nomLeu3.chr10 103307329 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738677 1 + 59248254 a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47844222 1 + 51301725 a i papAnu2.chr19 C 0 I 1452 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1820.000000 s hg38.chr19_GL949748v2_alt 921376 2 + 1064304 aa s panTro4.chr19 59861497 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774690 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307330 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738678 2 + 59248254 aa i macFas5.chr19 C 0 I 1404 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=2115.000000 s hg38.chr19_GL949748v2_alt 921378 5 + 1064304 aaaaa s panTro4.chr19 59861499 5 + 63644993 aaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774692 5 + 60714840 acaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307332 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 I 1724 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e macFas5.chr19 55738680 1404 + 59248254 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1228.000000 s hg38.chr19_GL949748v2_alt 921383 6 + 1064304 aaaaaa s panTro4.chr19 59861504 6 + 63644993 aaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774697 6 + 60714840 acaaaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e nomLeu3.chr10 103307337 1724 - 106955855 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e macFas5.chr19 55738680 1404 + 59248254 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=15540.000000 s hg38.chr19_GL949748v2_alt 921389 6 + 1064304 aaaTGA s panTro4.chr19 59861510 6 + 63644993 aaaTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774703 6 + 60714840 aaaTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309061 6 - 106955855 AAATGA i nomLeu3.chr10 I 1724 C 0 s rheMac3.chr19 60599808 6 + 64156825 AAATGA i rheMac3.chr19 I 1440 C 0 s macFas5.chr19 55740084 6 + 59248254 AAATGA i macFas5.chr19 I 1404 C 0 s papAnu2.chr19 47845675 6 + 51301725 AAATGA i papAnu2.chr19 I 1452 C 0 s chlSab2.chr6 47554621 6 + 50890351 AAATGA i chlSab2.chr6 I 1475 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I a score=19904.000000 s hg38.chr19_GL949748v2_alt 921395 6 + 1064304 CCAGGA s panTro4.chr19 59861516 6 + 63644993 CCAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774709 6 + 60714840 CCAGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309067 6 - 106955855 CCAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60599814 6 + 64156825 CCAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55740090 6 + 59248254 CCAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47845681 6 + 51301725 CCAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47554627 6 + 50890351 CCAGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102637048 6 + 122678785 CTAGGA i canFam3.chr1 I 3195 C 0 e calJac3.chr22 45904855 4633 + 49145316 I a score=1077798.000000 s hg38.chr19_GL949748v2_alt 921401 346 + 1064304 CACC-------CCAGGTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAAAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCGAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGGGGAAA s panTro4.chr19 59861522 346 + 63644993 CACC-------CCAGGTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAAAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCGAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GAGGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774715 346 + 60714840 CACC-------CCAGCTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCATGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCGGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAGAGCCCATAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCAAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGGGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309073 347 - 106955855 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTTGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCTTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCCAGGGGGAGAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCATTCAGCTGCTCCAGAAGGGTCTCCAGAGTCCACTGTAGCTGGGTTGCCA---TCATAGTGCTCCAAGTATGAGACCTCAGGTTAAGGC--TGAAGA--ACTGCGGGGGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60599820 345 + 64156825 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCTGTCAGCCTCTTCCACCTCAGACCATGGGGCCTTCTGCAGCACATCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TAAAGA--ACTG-GGAGAAA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55740096 345 + 59248254 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCCGTCAGCCTCTTCCACCTCAGACCATGGGGCCTTCTGCAGCACGTCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGAGAAA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47845687 345 + 51301725 CACC-------GCAGGTTCTACTTACCCAGCATCTCAGCCTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCCGTCAGCCTCTTCCACCTCAGACCACCGGGTCTGCTGCAGCACGTCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--actg-ggagaaa- i papAnu2.chr19 C 0 I 314 s chlSab2.chr6 47554633 345 + 50890351 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCCATGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGATGTGTTGATTAGAATTTCTGCCAGCTTCTTGCCATCAGCCTCTTCCACCTCAGACCACGGGGTCTTCTGCAGCACGTCTTCGAGGGGAAGAGCCCTTAAGAGCGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGAGAAA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909488 346 + 49145316 CATT-------CCGTGTTCTGCTCACCCAGCAACTCCACCTTTGCCATCTCAGACAATTCGGGGAGATTCAGCTCTTCGAAGACCTTCACAGTCGCGTTCCTTATCCAGCATTCTGAGGATGTGTTGACCAGAATTTCTGCCAGTTTCCTGCCGTTGGCTTCTTCCACCTCCGACCACGGGGTCTTCTGTAGCACATCTTCTAGGGGAAAAGCCCTCAAGATGGACTTGAAAGTCCCCAATTCACCCTCGCTCAGCTGCTCCAGAAGGGTCTGCAGAGTGTACTGCAGCTGTGGTAATG---TCATGGTGCTCCACGTGTGACAGCTTAGGTCAAGGC--CAAAGA--TCTA-GGGGAAAA i calJac3.chr22 I 4633 C 0 s canFam3.chr1 102637054 359 + 122678785 CACCATGTGGGCTTGTTTCTACTTACCCCTGAGCTCATCCTTTGCTCTCTCAGACAGATCGGTTCGGTTCATCTTGTCAAAAATCTGGATGGTCACCATCTCTACCCAGTGGCTGGGGCAGTGGTTGATAAGAATTTCTGCCAGCTGCTTCCCATCGGCCTCCTCTACCTCTGTCGCAGGGATGTGCTGTAATTCATCTTGTAGGGAAAGGGGCCTCAACAGAGACTTGAACTGGCTCAGCTCATCCTGGGCAAACTGTTCTAGAAGGGGCTGCAGGTTGAAACCCAGCTGTGCAGAAGGTTCCATCTTGTTCTACATGAGAGATCTGAGCTTTGGGCATTAAAGAAGAATA-AGGGAAG- i canFam3.chr1 C 0 C 0 a score=42929.000000 s hg38.chr19_GL949748v2_alt 921747 17 + 1064304 AAAGGAAAAACAGTTCA s panTro4.chr19 59861868 17 + 63644993 AAAGAAAAAACAGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775061 17 + 60714840 AAAGAAAAAACAGTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309420 17 - 106955855 AAAGAAAACACAGTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600165 17 + 64156825 AAAGAAACAACAGTTCA i rheMac3.chr19 C 0 I 480 s macFas5.chr19 55740441 17 + 59248254 AAAGAAACAACAGTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47846346 17 + 51301725 aaagaaaaaacaattca i papAnu2.chr19 I 314 C 0 s chlSab2.chr6 47554978 17 + 50890351 AAAGAAACAACAGTTCA i chlSab2.chr6 C 0 I 318 s calJac3.chr22 45909834 13 + 49145316 ----AAGGAACAGTTCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637413 13 + 122678785 AAATGAAAGAGAG---- i canFam3.chr1 C 0 C 0 a score=1219.000000 s hg38.chr19_GL949748v2_alt 921764 1 + 1064304 C s panTro4.chr19 59861885 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775078 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309437 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740458 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47846363 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45909847 1 + 49145316 C i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637426 1 + 122678785 C i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47554995 318 + 50890351 I e rheMac3.chr19 60600182 480 + 64156825 I a score=4435.000000 s hg38.chr19_GL949748v2_alt 921765 2 + 1064304 GA s panTro4.chr19 59861886 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775079 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309438 2 - 106955855 CA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600662 2 + 64156825 GA i rheMac3.chr19 I 480 C 0 s macFas5.chr19 55740459 2 + 59248254 gg i macFas5.chr19 C 0 I 598 s papAnu2.chr19 47846364 2 + 51301725 gA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555313 2 + 50890351 GA i chlSab2.chr6 I 318 C 0 s calJac3.chr22 45909848 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637427 2 + 122678785 GA i canFam3.chr1 C 0 C 0 a score=174733.000000 s hg38.chr19_GL949748v2_alt 921767 65 + 1064304 GTTACCATCATTAAATGAAACCACAGTTTCCTGTGTGCCAAGAACAAGA-----CTGTTCCTGCTGTACA s panTro4.chr19 59861888 65 + 63644993 GTTACCATCATTAAATGAAACCACAGTTTCCTGTGTGCCAAGAACAAGA-----CTGTTCCTGCTGTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775081 63 + 60714840 GTTACCATCATTAAATGAAAC--CAGTTTCCTATGTACCAAGAACAAGA-----CTGTTCCTGCTGCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309440 65 - 106955855 GTTACCATCATTAAATGAAACCACAGTTGCCTATGTGCCAAGAACAAGA-----CTGTCCCTGCAGCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600664 65 + 64156825 GTTACCATCATTAAATGAAACAACAGCTGCCTATGTGCTGAGAATGAGA-----CTGTTCCCGCTGCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55741059 65 + 59248254 GTTACCATCATTAAATGAAACAACAGCTGCCTATGTGCTGAGAATGAGA-----CTGTTCCCGCTGCACC i macFas5.chr19 I 598 C 0 s papAnu2.chr19 47846366 70 + 51301725 GTTACCATCATTAAATGAAACAACAGCTGCCTGTGTGGCGAGAATGAGACTGTTCTGTTCCCGCTGCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555315 65 + 50890351 GTTACCATCATTAAATGAAACAACAGCTGCCTGTGTGCCGAGAATGAGA-----CTGTTACCGCTGCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909850 61 + 49145316 GTTACCATCATTCAATGAAA--ACAGTGGCCTGTGTGCCGAGAACAA-------CTGTCCGTGCCGTACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637429 65 + 122678785 ATCAGTATTCCTACTTCAAATGACAGTTGCCTCTGTGCCAAGAACTGGG-----CAATTATCACTGCCCA i canFam3.chr1 C 0 n 0 a score=93711.000000 s hg38.chr19_GL949748v2_alt 921832 39 + 1064304 GTGAGTGGTAAAATATTCCAAAGACTGAATTAAGAGACT s panTro4.chr19 59861953 39 + 63644993 GCGAGTGGTAAAATATTCCATAGACTGAATTAAGAGACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775144 39 + 60714840 ATAAGTGGTAAAATATTACATAGACTGAATTAAGAGACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309505 39 - 106955855 ATGAGTGGTAAAATATTATGTAGACTGAATTAAGAGACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600729 39 + 64156825 AGGAGTGCTAAAATATTACGTAGACTGAATTAAGAGACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55741124 39 + 59248254 AGGAGTGCTAAAATATTACGTAGACTGAATTAAGAGACG i macFas5.chr19 C 0 T 568 s papAnu2.chr19 47846436 39 + 51301725 AGGAGTGCTAAAATATCACGTAGACTGAATTAAGAGACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555380 39 + 50890351 AGAAGTGCTAAAATATTACATAGACTGAATTAAGAGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909911 38 + 49145316 CTGAGTGGTGAAACGTGAGGTAGACCGAATTAAGAGAT- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I a score=96484.000000 s hg38.chr19_GL949748v2_alt 921871 34 + 1064304 GAAAATCTGGCCCAGCACggtggctcacgcctgc s panTro4.chr19 59861992 34 + 63644993 GAAAATCTggcccagcacggtggctcatgcctgc i panTro4.chr19 C 0 I 42 s ponAbe2.chr19 56775183 34 + 60714840 GAAAATCTGgcccagcacggtggctcatgcctgc i ponAbe2.chr19 C 0 I 42 s nomLeu3.chr10 103309544 34 - 106955855 GAAAATCTGACCCAgcacagtggctcatgcctgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600768 34 + 64156825 GAAAATCTggcccagcacagtggctcatgcctgc i rheMac3.chr19 C 0 I 1826 s macFas5.chr19 55740595 34 + 59248254 aaaaaattagccgggcgcggtggctcacgcctgt i macFas5.chr19 T 568 I 40 s papAnu2.chr19 47846475 34 + 51301725 GAAAAtctggcccagcacagtggctcatgcctgc i papAnu2.chr19 C 0 I 42 s chlSab2.chr6 47555419 34 + 50890351 GAAAATCTggcccagcacagtggctcatgcctgc i chlSab2.chr6 C 0 I 1731 s calJac3.chr22 45909949 34 + 49145316 GGAAATCTggctgggcgcggtggctcacgcctgt i calJac3.chr22 C 0 I 42 e canFam3.chr1 102637494 0 + 122678785 I a score=36953.000000 s hg38.chr19_GL949748v2_alt 921905 52 + 1064304 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA s panTro4.chr19 59862068 52 + 63644993 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA i panTro4.chr19 I 42 C 0 s ponAbe2.chr19 56775259 52 + 60714840 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA i ponAbe2.chr19 I 42 C 0 s macFas5.chr19 55740669 54 + 59248254 ggtcaggagatcgagaccatggtgaaaccccgtttctactaaaaat-----------agaaaaaa----- i macFas5.chr19 I 40 I 2 s papAnu2.chr19 47846551 52 + 51301725 ggccaggagttcaagacc-------agcctggctaacgtggtaaaA-----------AGAacgaaccaaa i papAnu2.chr19 I 42 I 597 s calJac3.chr22 45910025 62 + 49145316 ggtcgggagtttgagacc-------agcctggccaacatggcaaaaccgtccctactaaaactacaaaa- i calJac3.chr22 I 42 I 2 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103309578 0 - 106955855 C e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I a score=27420.000000 s hg38.chr19_GL949748v2_alt 921957 39 + 1064304 ggctgggcacggtggctcacgcctgtaatcccagcactt s panTro4.chr19 59862120 39 + 63644993 ggccgggcacggtggctcacgcctgtaatcccagcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775311 39 + 60714840 ggccgggcacggtggctcatgcctgtaatcccagcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309578 13 - 106955855 --------------------------aatctcagcactt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740725 39 + 59248254 agctgggcgcagtggcgggcgcctgtagtcccagctact i macFas5.chr19 I 2 C 0 s calJac3.chr22 45910089 39 + 49145316 agccggacatggtggcccatgcctgtaatcccagctact i calJac3.chr22 I 2 C 0 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I a score=132689.000000 s hg38.chr19_GL949748v2_alt 921996 262 + 1064304 tgggaggccgaggcggatggat--cacgatatcaggagatcgaga-------------------------------ccatcctggctaac-acagtgaaacccctgcctctact-aaaaaaatacaaaaaattagcagggcgtggtggcgggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcgggaggctgaggcaggagaatggtgtgaacccgggaagtggagcttgcagtgagcagagatctcaccattgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaa s ponAbe2.chr19 56775350 262 + 60714840 tgggaggccgaggcgggtggat--cacgatgtcaggagatcgaga-------------------------------ccatcctggctaac-acagtgaaacacctgtctctact-aaaaaaatacaaaaaattagccgggcatggtggcgggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcgggaggctgaggcaggagaatggtgggaacccgggaggcggagcttgcagtgagctgagatagcgacactgcactccagcctgggtgacagagcgaaactcggtctcaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309591 263 - 106955855 tgggaggctgaggcaggcggat--cacaaggtcaggagatggaga-------------------------------ccgtcctggctaac-acagtgaaacccccgcctctactaaaaaaaatacaaaaaattagccaggcgtagtggcaggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcaggtggctgaggcaggagaatggtgtgaacacgggaggcggagcttgcagtgagcagagatcgcgccattgcactccagcctgggcaacagagccagactccatctcaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740764 274 + 59248254 cgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggtgac-agagcaagactcc-gtctca----aaaaaaaaaaaaaaaattagccgggcgtggtggcgggcgcctgtagtccc-------------------------------------------------------------------------------------------agctactcaggagactgaggcaggagaatggcgtgaaacc-----------------ctgagccgagattgcaccactgcactccagcctgggcgacagagccagactccgtctcaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s calJac3.chr22 45910128 366 + 49145316 tgggaggctgagacaggagaatcgctccaacccaggaggtggaggttgcagtgagccactatact-----------ccagcctgggcaacaagagcgtaactcc-atctc-----aaaaa-----aaaaaaaTGTCAgggcacggtggcccacacctgtaatcccatcactttagtagactgaggtgggtggatcactggagtctggggagttagagaccagcctgagcaacaaggcaaaaccctgtctctactctagctacttggggggctgaggcaggaggatttcttgtgcccagaaagttgaggctgcagtgaggcaagatcacagcactgcattccagcctgagtgacaaggtgagactctgcctcaaaaaaaaaaaaaaaaa i calJac3.chr22 C 0 I 372 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=1998.000000 s hg38.chr19_GL949748v2_alt 922258 5 + 1064304 aaaaa s ponAbe2.chr19 56775612 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309854 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 I 18 s macFas5.chr19 55741038 5 + 59248254 gaaag i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=1403.000000 s hg38.chr19_GL949748v2_alt 922263 6 + 1064304 aaaaga s nomLeu3.chr10 103309877 6 - 106955855 AAAAGA i nomLeu3.chr10 I 18 C 0 s macFas5.chr19 55741043 6 + 59248254 aaaaaa i macFas5.chr19 C 0 I 1144 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=13630.000000 s hg38.chr19_GL949748v2_alt 922269 168 + 1064304 aTACAAAGAATGAAGGGTcagtggtatgctagggccagcccgtgctgcctaatgggggcttcctatatgtacctataccaacgtccatgggctgtgatttcacactgatagtacaaaatcacaaggggagtgtttatgccacagaaatcagcaaacacggcagggcgc s nomLeu3.chr10 103309883 159 - 106955855 ATACAAAGAATGAAGGGTcagtggtatgctagggccagcccgtgctggctaatgggggcttcctacatgtacctataccaacatccatgggctgtgatttcacactgatagtacaaaatcacaa---------tcataccacagaaatcagcaaacacggcagggcgt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e macFas5.chr19 55741049 1144 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=59802.000000 s hg38.chr19_GL949748v2_alt 922437 413 + 1064304 ggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggataacctgaggtcgggagctcaagaccagcctgaccaacacggcgaaac-cccatctctactaaaaatacagaaatta--caggcg--------ggtgcctgtaatcccagctactcaggaggccgagacaggagaatcacacttgaacctgggaggtggaggttgca-tgatctgagatcacgccattgcactcgagcctcggcaacaagaacaagactctgtctcaaacaaacaaaaaaacaaatcagcaaacactacaaaccaagacttcctcgccaccaaccctcagagccacttgtttaacatttcagcccaccactgAATGACACATTGAAAACAAATAGCAAGAGGACAGATATAAATATAACTGTACT s nomLeu3.chr10 103310042 423 - 106955855 ggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtccggagctcgagaccagcctgaccaacacagcgaaac-cctgtctctactaaaaatacaaaaattaaccaggcgtggtggcaggtgcctataatcccagctactcaggaggccaagacaggagaatcacacttgaacctgggaggtggaggttgca-tgatccgagatcacgccattgcactcgagcctgggcaacaagaacaaaactctgtctcaaacacacaaaaaaagaaatcagcaaacactacaaaccaagacttcctcgccaccaaccccaagagccacttgtttaacatttcagcccaccactgAATGACACATCGAAAACAAATAGCAGGAGGACAGATATAAATATAACTGTACT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47847200 307 + 51301725 ggtggctcaggcctggaatcccagcac-ttgggaggccaaggcaggtggatcacctgatgtcagccatttgagaccagcctggcccacgtggaGAAacgcccgtctctactaaaaatatagaagccagccaggcgtagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaagagaat--cgcttgaacccaggaggcagaggttgcagtgagccgagatggcaccattggactccagcctgggcaacaagagcgaaactccgttt-----aaataaatgaattaatta----------------------------------------------------------------------attaaat----------aaataaataa------------------------------ i papAnu2.chr19 I 597 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e macFas5.chr19 55741049 1144 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=225527.000000 s hg38.chr19_GL949748v2_alt 922850 475 + 1064304 ggccgggtatggtggctcaggcctggaatcccagcactttgggaggctgaggcaggtggatcgcctgatgtcaggagtttgagacccgcctggcccacatggtgaaaccccatctctactaaaaatacaaaagctagccaagtgtagtggtaggaacctgtaatcccaggtacgtgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatagcgccattgtactccagcctgggcaacaagagcgaaactctatctcaaaaaaaaa----------------aaaCttagccaggcctggtggaa---catacccgtagtcccagatacttgggaggctgacacaggaggattgtttgagcctacgatttggaggttgcagtgagccagccactgcacgcc-agcctgggtgacagagtgaggccctgtctcaaaaGTAAGTAACTAATggccgggtgcggtggctcac s nomLeu3.chr10 103310465 491 - 106955855 ggccgggcacggtggctcaggcctggaatctcagcactttgggaggccaaggcaggcagatcacctgacgtcaggagtttgagaccagcctggcccacatggtgaaaccccatctctactaaaaatacagaagctagccagacgtattggcaggaacctgtaatcccagggacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatggtgccattgtactacagcctgggcaacaagagcaaaactccttctcaaaaaaaaataataataataataataaTCttagccaggcctggtggag---catacctgtagtcccagatacttgggaggctgacacaggaggatcgtttgagcttgcgatttggagattgcagtgagccagccactgcactcc-agcctgggtgacagagtgaggcactgtctcaaaaGTAAGTAACTAATggctgggcgcagtggctcac i nomLeu3.chr10 C 0 I 759 s macFas5.chr19 55742193 486 + 59248254 ggccaggtgcagtggctcacgcctgtaatcccagcacgttgggaggcggaggcagcaggatcacctgatgtcagacgtttgagaccagcctggcccacgtggagaaaccccgtctctactaaaaatatagaagccagccaggtatagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatggcgtcattgtactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaa-----aaaaaaaaaaaaatcgtagccaggcctggtggtggtacatgcctgtagtcccagatacttgggaggctgacccaggagaatcgtctgagcctgcgatttggaggttgcagaa----agccactgcactccttgcctgggtgacagagtgaggccctgtctcaaaaGTAAGTAACTAATggctgggcgcggtggctcac i macFas5.chr19 I 1144 C 0 s papAnu2.chr19 47847507 486 + 51301725 ggccaggtgcagtggctcacgcccgtaatcccagcacgttgggaggcggaggcagcaggatcacctgatgtcagacgtttgagaccagcctggcccacgtggagaaaccccgtctctactaaaaatatagaagccagccaggtgtagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatggcgtcattgtactccagcctgggcaacaagagcgaaactctgtctcaaaaacaaa-----acaaaacaaaaaatcgtagccaggcctggtggtggtacatgcctgtagtcccagatacttgggaggctgacccAGGAGAATCGTCTGAGCCTGCGAtttggaggttgcagag----agccactgcactccttgcctgggtgacacagtgaggccctgtctcaaaactaagTAActaatggctgggcgcggtggctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=65923.000000 s hg38.chr19_GL949748v2_alt 923325 260 + 1064304 gcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtc---aggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaacaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgg-gaggctgaggcaggagaatggcgggaacccgg--gaggcggagcttgcagtgagcggagatcgcgccaccgcactccagcctgggcgacagagcgagactccgtct s nomLeu3.chr10 103311715 219 - 106955855 gcctgtaatcccagcactttaggaggccaaggcaggcggatcacgaggtc---------------------------------------------tctactaaaaatacaaaaaattaaccaggcatggtggcaggcgcctgtagtcccagctactcagagaggctgaggcaggagaatggcgggaacccgg--gaggcggagcctgcagtgagccgagatggagtcactgcactccagcctgggcgacagagcgagactccgtct i nomLeu3.chr10 I 759 I 20 s macFas5.chr19 55742679 219 + 59248254 acctgtaatcccaacactttgggaggctgaggcagcaggatcccttgaatctggggagttggagaccagcctgagaagcaaggccaaaacctatctctact----------------------------------------------ctagctacttgg-ggagctgaggcaggaggatttcttgagcccggaaaaagctgaggctgcagtgagtcaagatcgtactactgcattctagcctgggtgacaaagtgagactctgcct i macFas5.chr19 C 0 I 26 s papAnu2.chr19 47847993 219 + 51301725 acctgtaatcccaacacttcgggaggctgaggcagcaggatcccttgaatctggggagttggagatcagcctgagcagCAAGGCCAAAACCTATCTCTACT----------------------------------------------ctagctacttgg-ggagctgaggcaggagaatttcttgagcccagaaaaagctgaggctgcagtgagtcaagatcgcactactgcattctagcctgggtgacaaagtgagattctgcct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=-125.000000 s hg38.chr19_GL949748v2_alt 923585 1 + 1064304 G s papAnu2.chr19 47848212 1 + 51301725 c i papAnu2.chr19 C 0 I 26 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 923586 18 + 1064304 GGTTGGGGGGGCGGGGGG e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47848213 26 + 51301725 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=182.000000 s hg38.chr19_GL949748v2_alt 923604 2 + 1064304 AA s ponAbe2.chr19 56775617 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47848213 26 + 51301725 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=8211.000000 s hg38.chr19_GL949748v2_alt 923606 4 + 1064304 GAGG s ponAbe2.chr19 56775619 4 + 60714840 GAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103311954 4 - 106955855 GAGG i nomLeu3.chr10 I 20 C 0 s rheMac3.chr19 60602628 4 + 64156825 GAGG i rheMac3.chr19 I 1826 C 0 s papAnu2.chr19 47848239 4 + 51301725 gagg i papAnu2.chr19 I 26 C 0 s chlSab2.chr6 47557184 4 + 50890351 GAGG i chlSab2.chr6 I 1731 C 0 s calJac3.chr22 45910866 4 + 49145316 GAGG i calJac3.chr22 I 372 C 0 e canFam3.chr1 102637494 0 + 122678785 I e macFas5.chr19 55742898 26 + 59248254 I e panTro4.chr19 59862159 0 + 63644993 C a score=205284.000000 s hg38.chr19_GL949748v2_alt 923610 107 + 1064304 CAGCCTGGAAAATAAATAACAGAAAAAGTGACTTGCCAAGCCCGGGTGCTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATC-TTTTTCCCCAGCTGT s ponAbe2.chr19 56775623 107 + 60714840 CACCCTGGAAAATAAATAACAGAAAAAGTGACTTGCCAAGCCCGGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATC-TTTTTCCCCAGCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103311958 104 - 106955855 CAGCCTGGAGAATAAATAACAT----TGTGACTTGCCAAGCCTGGGTGGTGACAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATCTTTTTTCCCCAGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60602632 104 + 64156825 CAGCCTGGAAAATAAATAACAG--AAAATGACTTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGCAGGGAACAGCAACT--TTTTTCCCCAGCTGT i rheMac3.chr19 C 0 I 1680 s macFas5.chr19 55742924 104 + 59248254 CAGCCTGGAAAATAAATAACAG--AAAATGACTTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAACT--TTTTTCCCCAGCTGT i macFas5.chr19 I 26 C 0 s papAnu2.chr19 47848243 103 + 51301725 cagcctggaaaataaataacag--aaaatgattTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAGC---TTTTTCCCCAGCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47557188 99 + 50890351 CAGCCTGGA----AAATAACAG--AAAATGACCTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAC---TTTTTCCCCAGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45910870 101 + 49145316 CAGGCTGGAAAACGAA-AACGG--AAAGTGACTGGCCAAGCCCAGGTGGTGGCAGAAGTGGACAGCTTTACCCT---GAGGAAGGGCAGCTC-TTTCTCCTCAGCTTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e panTro4.chr19 59862159 0 + 63644993 C a score=4011.000000 s hg38.chr19_GL949748v2_alt 923717 2 + 1064304 GA s ponAbe2.chr19 56775730 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312062 2 - 106955855 GA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55743028 2 + 59248254 GA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47848346 2 + 51301725 GA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47557287 2 + 50890351 GA i chlSab2.chr6 C 0 I 1464 s calJac3.chr22 45910971 2 + 49145316 GA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=4899.000000 s hg38.chr19_GL949748v2_alt 923719 5 + 1064304 CGtgt s ponAbe2.chr19 56775732 5 + 60714840 GGtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312064 5 - 106955855 GGtgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55743030 5 + 59248254 GGTAT i macFas5.chr19 C 0 I 1534 s papAnu2.chr19 47848348 5 + 51301725 GGTAT i papAnu2.chr19 C 0 I 1593 s calJac3.chr22 45910973 5 + 49145316 GGTAT i calJac3.chr22 C 0 I 1761 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47557289 1464 + 50890351 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=151294.000000 s hg38.chr19_GL949748v2_alt 923724 679 + 1064304 ggggaaaaggaggacagatcagactgttactgtgtctatgtagaaagaaatagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctagccccaaccctgtgctcccagaaacatgtgctgtgtcacac-gtgggtttagggctatgcaggatgtgctttgttaaacagatgcttgaaggcagcatgcttgttaaaagtcatcaccactctctaatctcaagcacccagggacacaatacactgcggaaggctgcagggacctctgcctagaaaagccaggtattgtccaaagtttctccccatgtgatagcctgagataaggcctcgtgggaagggaaagaccagaccgtaccccagcccgacacccgtaaagggtctgtgctgaagaggattagtataagaggaaggcctttttgcagt-----taagaggaaggtatctgtctcctgctcgtccctgggcaatggaatgtctcggtgtaaaacccgatggtatgttccatccaccgagataggggaaaaccgccttagggctggaggtgacacatgctggcagcaatactgctctttaatgcaccagatatgtttatgtatgagcacatc-aaggcacagcacatttcctaaccttgtttatgacac--agacatt s ponAbe2.chr19 56775737 678 + 60714840 ggagaaaagaagtagaaatcagactgttactgtgtctatgtagaaagaagtagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctacccccaaccctgtgctcccagaaacatgtgctgtgtcatttaatgggtttacggctatgcaggatgtgctttgttaaacaaatgcttgaaggcagtatgcttgttaaaagtcatcacca--ctctaatctcaagcacccagggacacaaaacactgcggaaggccgcagggacttctgcctaggaaagccaggtactgtccaaggtttctccccgtgtgatagcctaagatatggcctcctgggaagggaaagacctgaccttcccctagcccgacacccgtaaagggtctgtgcttaagaggattagtaaaagaggaagccctctttgcagt-----taagaggaaggcatctgtctcctgctcgtccctgggcaatggaatgtctcggtgtaaaacccgatggtatgtttcttctactgagatagaagaaaaccgccttagcactggaggtgggacatgctggcggcaatactgctctttaatgcaccag--atgtttatgtatgtgaacatcaaaagtaca-cacattttctaaccttgtttatgacacagagacatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312069 657 - 106955855 ggggcaaaggag---agatcagactgttactgtgtctatgtagaaagaagtagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctacccccaaccctgtgcacgcagaaacatgtgctgtgtcgtttaatggatttagggctatgcgggatgtgctttgttaaacaaatgcttgaaggcagtatgcttgttaaaagtcatcaccactctctaatctcaagcacccagggacacaaaacac-gcagaaggccgcagggacctctgcctaggaaagccaggtattgtccaaggtttctccccatgtgatagtctgaaacatggcctcgtgggaagggaaagacctgaccgtcccctag-------------------ctgtg-----gaggattagtgaaagaggaagacttctttgcagttgagataagaggaaggcatctgtctcctgctcatctgtgggcaatagaatgtctc-gtgtaaaactcgattgtatgttccatctactgagatagaagaaaaccgccttagggctggaggtcagacatgctggtggcaatactgctctttaatacaccagctatgtttatgtatgtgcacatcaaagcgacaccatattttctaagcttgtttatgacag--agacatt i nomLeu3.chr10 C 0 I 246 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=40282.000000 s hg38.chr19_GL949748v2_alt 924403 520 + 1064304 tgctcacatgttttcctgctgaccctctccccactgttaccctattgtcctgccacatccccgtctccgagatggtagagataatgaccaataaatactgaaggaactcagagacccggccggcgcgggtc-------tcctga---------------gcccacttttctttctgtgtactttgtctctgtgtctctttcttttctcagtctctcgtcccacctgacaagaaacacccacaggtgtggaggggcaggccaccccttcaGTGAGGTATAATTACATATATCCTattttaggatggagcaggaagagcatgagagcccaggagttccagaccagcctgggcgacacaaggagaccttgtctctaTTTTTTAAGTAtttttaaagtaatatatacaacgtttacttgtcaaagtgtacagcatggagcgatgttatatatacagtgaaatgattaccacaatccagctaattaacatatccactgcttcatatagttgcctttcgtttttgcagtgacaacgcttgatgtactt s ponAbe2.chr19 56776415 535 + 60714840 tgttcacatgttctccagctgaccctctccccactattaccctattgtcctgccacacccc--tctctgagatggtagagataatgatcaataaatactgaaggaactcag-gaccaggctggcgcgggtcctccgtatgctgagcgccggtccccagggcccacttttctttctctatattttgtctctgtgtc----tcttttctcagtctctcatcccacccgacaagaaacacctacaggtgtggaggggcaggccaccccttcaGTGAGGTATAATTACATATATACAattttaggactgagcaggaagagcatgtgagcccaggacctccagaccagcctgggcaacacaaggagaacttgtctctaTTTTTTAAGTAttttaaaagtaatatatacaatgtttacttatcaaagtgtacagcatggagcgatgttatatatacagtgaaatgattaccacaatccagctaattaacatatctgctgcctcatatagttgcctttcctttttgcagtgagaacgcttgatctactt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 924923 59 + 1064304 agaaaaattcaggGTTTTTTggccaggcacggtggctcacgcctgtaatcccagcacta e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56776950 0 + 60714840 C e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=23363.000000 s hg38.chr19_GL949748v2_alt 924982 268 + 1064304 tgggaggccgaggcgggcagatcacaaggtgaggagctcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaaaattagccgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcttgaacctgggaggcggagcttgcagtgagccaagatcgcgccactgcactccagcctgggcgagtgagactccctctcaaaaaaaaaaaaaaaaagaaaagaaa s panTro4.chr19 59862159 261 + 63644993 tgggaggccgaggcgggcagatcacaaggtgaggagctcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaaaattagccaggcatggtggcgggcgcctgtagccccagctacttgggaggctgaggcaggataatggtgtgaacctgggaggcggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgagtgagactccctctcaaaaaaaaaaaaaaa-------gaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56776950 0 + 60714840 C e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=315912.000000 s hg38.chr19_GL949748v2_alt 925250 1247 + 1064304 agaaaaaTTCAGGGttttttttttctttttcagaa--agtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcttcccgggttcaagcgattctcctgcctc-ggcctcccaagtagctgggattacaggtatgccccaccacacctaattttttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtatgagccaccaggcctggccAAGTATTTTTTTTCCCAAGTACAtttttttcttttttt--cttttttttgagatggagtctccctctgttgcccaggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcaccgcatcacgccgggctagtttttgtatttttagtagagacagggtttcttgtttttttctgagatggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctgggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactatgcccagctaattttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatccgcccgcctcggcctcccatagtgctgggattacaggcgtgagccaccgcgcccggccgagacagggtttctctatgttggccaggctggcctcgaactcctgacctcagctgatccacccgcctcggcctcccaaagtgctgggatcacaggcgtgagccaccgcatctggccATTTACAttttttttttttttt--gatgcagcatttcactctggttgcccaggctggagtgcagtggcgcaatctcagctcaccgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccagctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccggcctcaggtgatctgaaagtgctgggattacaggcgtgagccaccgcgcccagccTACtttttttttttttt------------- s panTro4.chr19 59862420 1219 + 63644993 agaaaaaTTCAGGGttttttttttctttttcagaa--agtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcttcccgggttcaagcgattctcctgcctc-agcctcccaagtagctgggattacaggtatgcgccaccacacctaattttttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtatgagccaccaggcctggccAAGTATTTTTTTTCCCAAGTACAtttttttttcttttt-----ttttttgagatggagtctccctctgttgcccaggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcaccgcatcacgcctggctagtttttgtatttttagtagagacagggtttcttggttttttttgagacggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctgggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactatgcccagctaattttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatctgcccgcctcggcctcccatagtgctgggattacaggcgtgagccactgcacccggccgagacagggtttctctatgttggccaggctggcctcgaactcctg----------------------------------------GGATCACAGGCGTGAGCAACCGCATCTGGCCATTTACAtttttttttttttttttgatgcggcatttcactctggttgcccaggctggagtgcagtggcgcaatctcagctcaccgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccagctaattttgtatttttagcagagatggggtttctccatgttggtcaggctggtctcaaactcccgacctcaggtgatctgaaagtgctgggattacaggcgtgagccaccgcgcccagccTACttttttttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56776950 1253 + 60714840 agaaaaattcaggGtttcttttttctttttcagaaagagtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcctcccaggttcaagcgattctcctccctcaggcctcccaagtaggtgggattacaggcatgcgccatcacacctaattttttttgtatttttagtacagacggggtttcaccatgttggccaggctgatcttgaactcctgacctcaggtgatctgcccgcctcagcctccgaaagtgctgggattacaggtatgagccaccaggcccggccAAGTA-TTTTTTTCCCAAGTACAtttttttcttttttttttttttttttgagacggagtctccctctgttgccca-gctggagcgcagtggcacaatctccactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcactgcgtcacgcctggctagtttttgtatttttagtagagacagcatttctggtttttttttgagacagagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcttcagcctcccgagtagctgggactacaggcgcctgccactatgcccatctaattttttttgtatttttagtagagacagggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccgagacagggtttctctatgttggccaggctggcctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatcacagttgtgaccaaccgcatctggccATCTACAttttttttttttttg-ggatgcgccgtttcactctggttgcccaggctggagtgcagtggctcaatctcagctcaccgcaacctctgcctcccgggttcaggtgattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgcccagctaattttgcatttttaatagagatggggtttctccatgttggtcaggctggtctcaaactcccaatctcaggtgatctgaaagtcctgggattacaggtgtgagccaccatgcccagccTACtttttttttttttt-----------tt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=2730.000000 s hg38.chr19_GL949748v2_alt 926497 3 + 1064304 aaa s panTro4.chr19 59863639 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778203 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55744569 3 + 59248254 aaa i macFas5.chr19 I 1534 C 0 s papAnu2.chr19 47849946 3 + 51301725 aaa i papAnu2.chr19 I 1593 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=18023.000000 s hg38.chr19_GL949748v2_alt 926500 18 + 1064304 cagggtcttcatctcatc s panTro4.chr19 59863642 18 + 63644993 cagggtcttcatctcatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778206 18 + 60714840 cagggtctccatctcatc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55744572 17 + 59248254 cagggttacc-tctcatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47849949 17 + 51301725 cagggtcacc-tctcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47558753 18 + 50890351 cagggtcaccatctcatc i chlSab2.chr6 I 1464 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=968054.000000 s hg38.chr19_GL949748v2_alt 926518 574 + 1064304 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctcctggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagacggagtcgcactctgtctcccaggctggagtgcagtggcgcgatctcagctcattgcaacct-ccccctcctaggtttaagctattctcctgcctcaaccttccaagtaactgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacagggtttcaccattttgggcaggctggtctcaaacttctggcctcaagtgatccacccgcctcggcctcccaaagtgttgggataacaggcatgaaccactgtgcctggccttatatttttttgtaatgacagagttttaccatgttgcccaggctagtctcaatctcctgaactcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACA---TTAggccaggcgtggtggctcacacctggaatcccagcactttgggaggccgaggcagacagattac s panTro4.chr19 59863660 575 + 63644993 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctcctggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagatggagtcgcact--gtctcccaggctggagtgcagtggcacgatctcagctcattgcaacct-ccccctcctaggtttaagctattctcctgcctcaaccttccaagtaactgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacagggtttcaccattttgggcaggccagtctcgaactcctggcctcaagtgatccacccgcctcggcctcccaaagtgttgggataacaggcatgaaccactgtgcctggccttgtatttttttgtagtgacagagttttaccatgttgcccaggctagtctcaatctcctgaactcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcacggtggctcacacctggaatcccagcactttgggaggccgaggcagacggattac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778224 578 + 60714840 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctgccggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagacggggtcccactctgtctcccaggctggagtgcagtggtgagatctcagctcattgcaacct-ccccctcccaggtttaagctattctcctgcctcaactttcgaagtaactgggattacaggcatgcaccaccatacctggctaatttttgtgtttttagtagagatggggtttcaccattttgggcaggctggtctcgaactcctggcttcaagtgatccacccgcctcggcttcccaaagtgttgggataacaggcatgaaccactgtgcctggccttgtatttttttgtagagacagagttttaccatgttgcccaggctagtctcaatctcctgagctcCTCTAAACTATATTTGAAATAGAAGTCCTTAAGACAACATTAggccaggtgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggattac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60604416 516 + 64156825 caggctggagtgca-gtgcacaatcacacctcattgcagcccccacctcccgactcaggtgatcctcccacctcaccccacaagtagcctggacacagcacgcggtctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcacgatctcagctctctgcaacctccccccttcccggtttaagccattctcctgcctcaaccttccaactaacagggattacaggcatgcaccactacacctggctaacttttgtgtttt----------------------------------------------------------tgattcgcccatctcggcctcccaaagtgttgggataacaggcatgagccattgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcaggcggatcac i rheMac3.chr19 I 1680 C 0 s macFas5.chr19 55744589 573 + 59248254 -aggctggagtgca-gtgcacaatcacacctcattgcagcccccacctcccgactcaggtgatcctcccacctcaccccacaagtagcctggacacagcacgcggtctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcacgatctcagctcactgcaacctccccccttccaggtttaagccattctcctgcctcaaccttccaactaacagggattacaggcatgcaccactacacctggctaacttttgtgtttttagtagagacggggtttcaccattttgggcaggctagtctcgaactcctggcctcaaatgattcgcccatctcggcctcccaaagtgttgggataacaggcatgagccattgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47849966 571 + 51301725 -aggctggagtgcaggggcacaatcacacCTCattgcagcccccacctcccgactcaggtgatcctcccacctcacctcacaAGTAGCCTGGACACAGCACGAGGTctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcgcgatctcagctcactgcaacctccccccttccaggtttaagccattctcctgcctcaaccttccaactaattgggattacaggcatgcaccactacacctggctaacttttgtgtttttagtagagacggggtttcaccattttgggcaggctggtctcgaactcctggcctcaaatgattcgcccacctcggcctcccaaagtgttgggataacaggcatgagccactgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcctcTAAACTATATTTG-AATAGAAGTCCTTAAG---acattaggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47558771 571 + 50890351 -aggctggagtgcagtggcacaatcacacctcattgcagcccccacctcccggctcaggtgatcctcctacctcaccccacaagtagcctggacacagcatgaggtccggccttctttg--ttttgagacggagtctccctctgtgtcccagactggagtgcagtggcgcgatctcagttcactgcaacct-ccccctcccaggtttaagccattctcctgcctcaaccttccaactaactgggattataggcatgcaccaccacacctggctgatttttgtgtttttagtagagacggggtttcaccattttgggcaagctggtctcgaactcctggcctcaaatgatttgcccacctcggcctcccaaagtgttgggataacaggcatgagccactgtgactggccttgt-cttttttggagagac--agctttaccatgttacccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=462384.000000 s hg38.chr19_GL949748v2_alt 927092 232 + 1064304 ctaaagtcaggagttcaagaccagcctggccaacatggtgagaccccgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggtgaacccaggaggcggagtttgcagcgaaccaagatcacgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaa-------------- s panTro4.chr19 59864235 232 + 63644993 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggcggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggtgaacccaggaggcggagtttgcagtgaaccaagatcacgccactgcactccagcctgggcgacagagggagactccatctcaaaaaaaaaaaa-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778802 232 + 60714840 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaatattagccaggcgtggtggcacatgcctgtaagcccagctactcaggaggctgaggcaggagaatggcggctgaaccctggaggcggagcttgcagtgagcccagatcgcgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaa-------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60604932 220 + 64156825 ctaaagtcaggagttcaagaccagcctagccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtagtggcgggtgcctgtaatccccgctactcaggagactgaggcaagaaa----------atcccaggaggcggaggttgcagtgagcagagatcatgccactgtacgcgagcctgggca--agagtgagactctgactaaaaaaaaaaaaa-------------- i rheMac3.chr19 C 0 I 17 s macFas5.chr19 55745162 220 + 59248254 ctaaagtcaggagttcaagaccagcctagccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggagactgaggcaagaaa----------atcccaggaggcggaggttgcagtgagcagagatcacgccactgtacaccagcctgggca--agagtgagactctgtctaaaaaaaaaaaaa-------------- i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47850537 220 + 51301725 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccaggtactcaggagactgaggcaagaaa----------atcccaggaggcagaggttgcagtgagcagagatcatgccactgcacaccagcctgggca--agagtgagactctgtctaaaaaaaaaaaaa-------------- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47559342 229 + 50890351 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggagactgaggcaagaaaa-atcacttgatcccaggaggcggaggttgcagtgagcagagatcatgccactgcactccagcctgggca--agagtaagactctgtcttaaaaaaaaaaaa-------------- i chlSab2.chr6 C 0 I 22 s calJac3.chr22 45912739 244 + 49145316 ctgaggtcaggaattcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaactagccaggtgtggtgatgcgtgcctgttatcacagctactcgggaggctaagacagaaga--atcactggaacccgagaggtggagtttacagtgggcggagatcccaccactgcactccagcctgggtgacggagtgagactctatctccaaaaaaaaaaaaaaaaaaaaaaaaa i calJac3.chr22 I 1761 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=1368.000000 s hg38.chr19_GL949748v2_alt 927324 8 + 1064304 a---------TCAAAGA s panTro4.chr19 59864467 17 + 63644993 aaaaaaaaaaTCAAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779034 10 + 60714840 a-------aTTCAAAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55745388 8 + 59248254 ---------agaaaaga i macFas5.chr19 I 6 I 10 s papAnu2.chr19 47850760 8 + 51301725 ---------agaaaaga i papAnu2.chr19 I 3 I 10 s chlSab2.chr6 47559593 8 + 50890351 ---------agaaaaga i chlSab2.chr6 I 22 I 10 s calJac3.chr22 45912983 8 + 49145316 ---------aTCAAAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60605152 17 + 64156825 I a score=176666.000000 s hg38.chr19_GL949748v2_alt 927332 81 + 1064304 TCCTTCCAGCATCCTCGCACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAGCTTCTTCTCCCTTA s panTro4.chr19 59864484 81 + 63644993 TCCTTCCAGCATCCTCGCACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAACTTCTTCTCCCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779044 84 + 60714840 TCCTTCCAGCACCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTATGGTGGTGGAAACTCAACCAATAATTTCTTCTCCCTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60605169 82 + 64156825 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTTAGGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i rheMac3.chr19 I 17 C 0 s macFas5.chr19 55745406 81 + 59248254 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47850778 81 + 51301725 tcctTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i papAnu2.chr19 I 10 C 0 s chlSab2.chr6 47559611 81 + 50890351 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAGTGTCTTCTCCCTTA i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45912991 67 + 49145316 --------------TCACACCAACCGTCAGGGGTT-GGGAAGGGCCA---TGGGGGAAACTCAACCAATAATTACTCCTCCCCGG i calJac3.chr22 C 0 I 259 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=12834.000000 s hg38.chr19_GL949748v2_alt 927413 6 + 1064304 AACGAG s panTro4.chr19 59864565 6 + 63644993 AACGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779128 6 + 60714840 AACGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60605251 6 + 64156825 AATGAG i rheMac3.chr19 C 0 I 120 s macFas5.chr19 55745487 6 + 59248254 AACGAG i macFas5.chr19 C 0 I 119 s papAnu2.chr19 47850859 6 + 51301725 AACGAG i papAnu2.chr19 C 0 I 119 s chlSab2.chr6 47559692 6 + 50890351 AACGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45913317 6 + 49145316 AAAGAA i calJac3.chr22 I 259 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=781.000000 s hg38.chr19_GL949748v2_alt 927419 1 + 1064304 A s panTro4.chr19 59864571 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779134 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55745612 1 + 59248254 G i macFas5.chr19 I 119 C 0 s papAnu2.chr19 47850984 1 + 51301725 G i papAnu2.chr19 I 119 C 0 s chlSab2.chr6 47559698 1 + 50890351 G i chlSab2.chr6 C 0 I 119 s calJac3.chr22 45913323 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60605257 120 + 64156825 I a score=102333.000000 s hg38.chr19_GL949748v2_alt 927420 50 + 1064304 AGACAAAGAAATCGATGCAAGAACCAGCACTCACCTCCCTCAGGTCAGGT s panTro4.chr19 59864572 50 + 63644993 AGACAAAGAAATCGATGCAAGAACCAGCACTCACCTCCCTCAGGTCAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779135 50 + 60714840 AGACAAAGAAATCGATGCAGGAACCAGCACTTACCTCCCTTAGGTCAGGT i ponAbe2.chr19 C 0 I 121 s rheMac3.chr19 60605377 50 + 64156825 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i rheMac3.chr19 I 120 C 0 s macFas5.chr19 55745613 50 + 59248254 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47850985 50 + 51301725 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47559818 50 + 50890351 AGACAAATGAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i chlSab2.chr6 I 119 C 0 s calJac3.chr22 45913324 49 + 49145316 AGACGAAGAAACTGATGCAAGCATCAGCACTCACCTCCGT-AGAGCAGGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=2128422.000000 s hg38.chr19_GL949748v2_alt 927470 1072 + 1064304 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGAAACGGATAAAAAG-------GGGAGGTCT----CTGGCCCTTGGTACGCTAGGTGGAGAGACAGCTTTCCCGCCCAGGGTGGAACCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCAcctgggccccatcctcagggatttggctgtaattgggcttcagtgggctttggagaattacggcttgctgaatctccccaggtgagattaatgtgcaATTCCCTTCCTAGACCACCCGGGCCAGGTGTGATAGGCGACAGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTAAAAACTCTTGTAGAGa-aaaaaaattaaacaaaaataaa-----taaaaatt---aaaaaaaaAGAGGACAAAAACTCCCGTGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTggccaactgtggtgcctcctgcctataaatcccagcaggctgagaggcctaggccagtggatccctaggggccaggagtttgataccagcctaggcaacatagcaagatgccatctcttcaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtagtcccagcaatttgggaagccgaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacgtg-gtgaaactctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgagacaggacaatcacttgaactagggaggtggagggtg-agtgaggcacgatcacgccattgcactccagcctgggtgacaagagcaaga--ct-gtct----caaaaacaaaaac-aaaaaa-attagccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gctcaggagtttgaggctgcagtgagctgtgactg-gccatctcactccagcctaggccacagagtgagacccagtctcaaaaaaa s panTro4.chr19 59864622 1073 + 63644993 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGGAACGGATAAAAAG-------GGGAGGTCT----CTGGCCCTTGGTACGCGGGGTGGAGAGACAGCTTTCCCGCCCAGGGTGGAGCCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCAcctgggccccatcctcagggattcggctgtaattgggcttcagtgggctttggagaattacggcttgctgaatctccccaggtgagattaatgtgcaATTCCCTTCCTAGAGCACCCGGGCCAGGTGTGATAGGCAACAGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTTAAAACTCTTGTAGAGa-aaaaaaattaaacaaaaataaa-----taaaaatt---ttttaaaaaGAGGACAAAAACTCCCATGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTggccaactgtggtgcctcctgcctataaatcccagcaggctgagaggcctaagccagtggatccctaggggccaggagtttgataccagcctaggcaacatagcaagatgccatctcttcaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtagtcccagcaatttgggaggccgaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacgtg-gtgaaactctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgagacaggacaatcacttgaactagggaggtggagggtg-agtgaggcacgatcacgccattgcactccagcctgggtgacaagagcaaga--ct-gtct----caaaaacaaaaacaaaaaaa-attagccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gcccagaagtttgaggctgcagtgagctgtgactg-gccacctcactccagcctaggccacagagtgagacccagtctcaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779306 1080 + 60714840 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGAAATGGATAAAAAG-------GGGAGGTCTCTGACTGGCCCTTGGTACGTTGGGTGGAGGGAGAGCTTTCCCACCCAGGGTGGAGCCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCACCT-ggccccgtcctcagggattcggctgtaattgggctgcagtgcgctttggagaatcacggcttgctgaatctcccctggtgaaattaatgtgcaATTCCCTTCCTAGACCACCCGGGGCAGGTGTGATAGGCGACGGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTAAAAATTCTTGTAGAGa-aaaaaaaataaacaaaaataaa-----taaaaattaaaaaaaaaaaaGAGGATAAAACCTCCAGTGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTGGCCAACTATggttgctcctgcctataaatctcagcaggctgagaggcctaggccagtggatccctaggggccaggagtttgagaccagcctaggcaacagagcaagaagccatctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcacgcctgtagtcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacatg-gtgaaaccctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcgggtgccta-aatcccagctactcgggaggctgagacaggacaatcacttgaactcaggaggtggagggtgcagtgaggcaagatcacgccattgcactctagcctgggtgacaggagcaagactct-gtct----caaaaacaaaaac-aaaaaa-attaaccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gcccaggagtttgaggctgcagtgagctgtgactg-gccacctcactccagcctgggccacagagtgagaccctgtctcaaaaaaa i ponAbe2.chr19 I 121 I 1391 s rheMac3.chr19 60605427 1082 + 64156825 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgggctttggggaagcactgcttgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAAGGTACCTGGCTCCCAGCTCTAGAAACGCTTGCAGAGa-aaaaaaattaaacaaaaataaataaattaaaattt---ttaaaaGAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTggccaactgtggtggctcctgcctataaatcccagcaggccgagaggcctaggccaggagatctctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtgtatcacctaatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccagctacttgggaggctgagacacgagaatcacttgaacccaggaggcagaggttgcagtgacgtgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaagaac-aaaaaacattatccatacatgatggcctgcacctgtaatcccagctattcaggaggctgagctgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccaccccacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55745663 1082 + 59248254 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgggctttggggaagcactgattgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAAGGTACCTGGCTCCCAGCTCTAGAAACGCTTGCAGAGA-AAAAaaattaaacaaaaataaataaattaaaATTT---TTAAAAGAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTggccaactgtggtggctcctgcctataaatcccagcaggccgagaggcctaggccagcagatctctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtgtatcacctgatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccagctacttgggaggctgagacacgagaatcacttgaacccaggaggcagaggttgcagtgacgtgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaagaac-aaaaaacattatccatacatgatggcctgcacctgtaatcccagctattcaggaggctgagctgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccaccccacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47851035 1082 + 51301725 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACACAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCACCTGGGCCCCATCCTCAGGGATTCAGCTGTAATTGGGCTGCAGTGGGCTTTGGGGAAGCACTGCTTGTTGAATCTCCCCAGGTGAGGTTAATGTGCAATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAGGGTACCTGGCTCCCAGCTCTAAAAATgcttgcagaga-aaaaaaattaaacaaaaataaataaattaaaattt---ttaaaagaagaggataaaaaCTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTGGCCAactgtggtggctcctgcctataaatcccagcaggCCGAGAGGCCTAGGCCAGCAGATCTCTagggaccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccaaggtgggtgtatcacctgatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatat-aaaaattagccaggcgtggtagtgggtgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaaccctggaggcagaggttgcagtgaggcgagagcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaaaaac-aaaaaacattatccATACATgatggcctgcacctgtagtcccagctattcaggaggctgaggtgggaggatgacctga------acccaggagtttgaggctgcagtgagctgtgattgtgccacctcacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47559868 1081 + 50890351 GTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgcgctttggggaagcacggcttgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCAGGGTCAGGTGTGATAGGTGACGGAACAGGAAA-TACACATTGTGGATTTTGCAGGGTACCTGGCTCCCAGCTCTAAAAACGCTTGCAGAGA-AAAAaaattaaacaaaaataaataaattaaaATTT---TTAAAAAAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAGTAAGTCTACTTTGTggccaactgtggtggctcctgcctatagatcccaggaggccgagaggcctaggccagcggatccctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtggatcacctgagatcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccggctactcgggaggctgagacaggagaatcacttgaacccaggaggcagaggttgcagtgagatgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaaaaac-aaaaaa-attatccatacatgatggcctgcacctgtaatcccagctattcaagaggctgaggtgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccacctcacttcagcctgggccacaaag-gagaccctgtctcaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45913373 1021 + 49145316 CTTGCTTCCGGCCGGTGTTTTCTGCGAAGGACTTGGGTAATAAGAGGGTCAGGGAGCTCTGGGATTGG-CCTGGGGACCCGGGGTGGAGGCAGGTGTTTCCCGCCCAGGGTGGAGCTG-CCCACCGAGATTAACACTGCTTGGCTCCCAACCACTGACCTCAGACTAACCTTGACATCAcctgggccccatcctccgggattcagctgtcattgggctgcagtgggctttgggg-agcagggcttgctgaaagtccccaggtgaggttaatgtgcag-----TTCCTAGACCACCGAGGTCAGGTGTGATCGGCGACAGAACAGGACATTATACATTTTCAGTTTTATGGGGTCGCTGGCTCCCAGCTCCAAAAACTCATGTAAAGAGAAAAAAATTAAACGTAAATAAA-------TGTTTT---TTAAAAAAA---GATAAA----------------------------------------------ggccgggcgtcgtggctcacgcctgta-atcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaatta-----------gctgggcatggtggtgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggagattgcggtgagcagagatcgtgccattgcactccagcctgggtaacaagagcgaaactccgtctcaaaaacaaaaccaaaccaaaaaaagataaa--aaGTCTTGTGACG---gcctgtaatcccagcactttgggaggcggaagtgggtggatcac--gaggtcaggagttcaaga-------------------------------ccagtctggccaatatgatgaaac--ctcatctctactaaaaat-------acaaaa-attatctgggcatagtggcatgtgcccgtaatcccagctactcgggaagctgaggcaggagaatcgcttgaaccgggacctgggaggcggaggttacagtgagccaagattgagccacctcactccagcctgggctacagagaaagactccgtctcaaaaaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=6926.000000 s hg38.chr19_GL949748v2_alt 928542 11 + 1064304 taaaTAGATAA---- s panTro4.chr19 59865695 11 + 63644993 taaaTAGATAA---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60606509 7 + 64156825 ----taaataa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55746745 7 + 59248254 ----taaataa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852117 7 + 51301725 ----taaataa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47560949 7 + 50890351 ----taaataa---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45914394 11 + 49145316 ----taaaaaaagaa i calJac3.chr22 C 0 I 7610 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56780386 1391 + 60714840 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=461783.000000 s hg38.chr19_GL949748v2_alt 928553 360 + 1064304 CTGATATTTAA------tttttttttttggatggagtcttgctctgtggcccaggctggagtgcagtggtgcaatctccattc-ttgcaacctctgccttccaggttcaagcaattctgatgcctcagcttcccaagtagctgggactgcaggcacatgccaccatgcccaactaattttttgtatttttagtagagacagggtttcaccatattggtcaggctggtctcaaactcctgatgtcaggt--------------------------------gatTACAGGCATGAGCCACCGCACCTGGCCTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGGTAGTTTAAACTGTTAATTTAATGGAAGCA s panTro4.chr19 59865706 361 + 63644993 CTGATATTTAA-----ttttttttttttggatggagtcttgctctgtggcccaggctggagtgcagtggtgcaatctcggttc-ttgcaacctctgccttccaggttcaagcaattctgatgcctcagcctcccaagtagctgggactgcaggcacatgccaccatgcccaactaattttttgtatttttagtagaggcagggtttcactatattggtcaggctggtctcaaactcctgatgtcaggt--------------------------------gatTACAGGCATGAGCCACCACACCTGGCCTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAACATTCAGCACAGAATTTTGGTAGTTTAAACTGTTAATTTAATGGAAGCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60606516 392 + 64156825 CTGATATTTAA--TGttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgctccccaggttcaagcaattcttgtgcctcagcctcccgagtagctgggactgaaggcacacaccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcaatccacccacctcggccttccaaagtgctgggattacaggcaggagccaccgcacctggccTAAAATTGTTTTTAAATAAAACAGCGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAACGGAAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55746752 394 + 59248254 CTGATATTTAAttttttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgctccccaggttcaagcaattcttgtgcctcagcctcccgagtagctgggactgaaggcacacaccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcaatccacccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcacctggccTAAAATTGTTTTTAAATAAAACAGCGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAACGGAAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852124 392 + 51301725 cggatatttaa--ttttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgcttcccaggttcaagcaattctcgtgcctcagcctcccgagtagctgggactgcaggcacatgccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcgaactcctgatgtcgggtgatccacccacctcggcctcccgaagtgctgggattacaggcatgagccactgcacctggcctaaaattgtttttaaataaaacagtgtATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAATGGAAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47560956 391 + 50890351 CTGATATTTAA---tttttttttttttgagatggagtctcgctctgtggtctaggctggagtgcagtagtgcagtctcagttcactgcaacctccgcttcccaggttcaagcaattctcatgcctcagcctcccgagtagctgggactgcaggcacatgccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcgatccacccacctcggcctcccgaagtgctgggattacaggcatgagccaccacacctggccTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAATGGAAGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56780386 1391 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=917661.000000 s hg38.chr19_GL949748v2_alt 928913 559 + 1064304 AATGGTCCCACAAATGAAGATGTATATATCAGTTGCAGCATGCCATCTATAGAAATAGGCACTATGGAggcctggcatggtggctcacacctgtaatccctgcactttggaaggctgaggcaggtggatcatctgaggtcagcagttcgagaccaacctgggcaacatggcaaaa-aa-cc----cctggctactaaaaat-aaagaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcgtaagaattgattgaacctgggagttggaggttgccgtgagccgagattgcaccactgcgctccagcctgggcgacagagactccatcttt------aaaaaaaaaaa------------aaaaagaTggccaggcgcagtggttcatgaatgtaatcccagcactttgggaggctgaggcgggaggactgcctgagtccaggagttcaagaccagcctgggcaatatggcgagactccctctctgaagaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAA-----AGAGAGAGAGAGTATATTTTGTT s panTro4.chr19 59866067 569 + 63644993 AATGGTCCCACAAATGAAGATGTAAATATCAGTTGCAGCGTGCCATCTACAGAAACAGGCACTATGGAggcctggcatggtggctcatgcctgtaatccctgcactttggaaggctgaggcagctggatcatctgaggtcagcagttcgagaccaacctgggcaacatggcaaaa-aa-cc----cctggctactaaaaat-aaagaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagttggaggttgcagtgagccgagattgcaccactgcgctccagcctgggagacagagacaccatctttaaaaaaaaaaaaaaaaa------------aaaaagaTggccaggcgcagtggttcatgaatgtaatcccagcactttgggaggctgaggcaggaggactgcctgagtccaggagttcaagaccagcctgggcaatatggcgagactccctctctgaaaaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAAA-AAGAGAGAGAGAGAGTATATTTTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56781777 558 + 60714840 AATGGTCCCACAAATGAAGATGTATATATCAGTTGCAGCATGCCATTTATAGAGATAGACACTATGGAggctgggcacggtggctcatgcctgtaatccctgcactttggaaggctgaggcgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatggcaaaaccc-cc----cctggcaactaaaaat-aaaaaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggaggcggaggttgcagtgagccgagattgcacgactgcgctccagcctgggcgacagagactccatctt---------aaaaaacaa------------aaaaaGATggccaggcgcaatggttcatgaatgtaatcccagcactttgggaggctgaggcgggaggactgcctgagtccaggagttcaagaccagcctgggaaatattgcgagactccctctctgaaaaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAAA----AAAGAGAGAGAGTATATTTTGTT i ponAbe2.chr19 I 1391 C 0 s rheMac3.chr19 60606908 585 + 64156825 AACGGTCCCACAAATGGAGACGGATATATCAGCAGCAGCATGCCAGCTATAGAGACAGGCACTGTGGAggccggacacggtagctcacgcctgtaatccctgtacttcggaaggccaaggtgggtgtatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggagaatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt--aaaaaaaaaaaaaaaaaGAGAGAGAGAGAGAGAGATggccagccgcagtgattcacgaatggaatcccagcattttgggaggctgaggcgcgaggatggcctgagtccaggagttcaagaccagcctaagtgacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATCAAAATAAATTCTATTCTAGCTGAC-AAAAAAAAAAAAAGAGAGAGAGTATATTTTGTT i rheMac3.chr19 C 0 I 308 s macFas5.chr19 55747146 582 + 59248254 AATGATCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTATAGAGACAGGCACTGTGGAggccggacacggtagctcacgcctgtaatccctgtacttcggaaggccaaggtgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggagaatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt----aaaaaaaaaaaaaaagagagagagagagaGAGATggccagccgcagtgattcacgaatggaatcccagcattttgggaggctgaggcgcgaggatggcctgagtccaggagttcaagaccagcctaagtgacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATCAAAATAAATTCTATTCTAGCTGAC--AAAAAAAAAAAAGAGAGAGAGTATATTTTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852516 579 + 51301725 AATGGTCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTATAGAGACAGGCACtgtggaggccgggcacggtagctcacgcctgtaatccctgtacttcggaaggccaaggcgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-caccCCCCTCctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggaagatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt----aaaaaaaaaaaaaa----agagagagagagagatggccaGCTGCAGTGATTCACGaatggaatcccagcattttgggaggctgaggcgggaggatggcctgagtccaggagttcaagaccagcctgagtgacacggtgagactccctctctgaaaaaaaagaaaataaaaacaatcaaaataaattctattctagctgac--aaaaaaaaaaaagagagagagtataTTTTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47561347 546 + 50890351 AATGGTCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTGTAGAGACAGgcactgtggaggccgggcacgg------------------cctg-------------------------agcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaatgaaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctggaaggcggaggttgcagtgagcccagattgcaccactgcactccagcctgggcgacagagactccatcttaaaaaaaaaaaaaaaaaaaaagagagagagagagagaTggccagtcgcagtgattcacaaatgtaatcccagcattttgggaagctgaggcacgaggatggcctgagtccaggagttcaagaccagcctgagcaacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATGATAATAAATTCTATTCTAGCTGACCAAAAAAAAAGAGAGAGAGAGAGTATATCTTGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=1378495.000000 s hg38.chr19_GL949748v2_alt 929472 782 + 1064304 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAGAGATAAACATGAAAGAGGTATCTCTTGTTATACATACCCAGGCCCTGCAACCACACCTGAGtttatgtaaatgaggtgacttttggaaagcccctagataaccccacaagtgcgagggactggctgccaaagaaaccgtcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaaccccaaaagaaaagggtttgggccgggtgtcctgtggctcatgcccgtaatcccaacgctttggg--aggcctagatgggaggattgcttgagcccaagaattctaggccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgtagacccagctactcaggaggctgaggcatgagaatcacttgaacgcaggagacagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagttagactgtctc-------------aaaaaa-----aaaaaaaaccaggaaagagttcagaagagcttcctggttggtgaacccgggtgcattcgtgtgccaggactgtggtgcaccccaggtccacagggacagaagctcctgcacttcggactcctctaaacctccccctacgcatctcttccttggctgttcattt s panTro4.chr19 59866636 793 + 63644993 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAGAGATAAACATGAAAGAGGTATCTCTTGTTATGCATACCCAGGCCCTGCAACCACACCTGAGtttatgtaaatgaggtgacttttggaaagcccctagataaccccacaagtgcgggggactggctgccaaagaaaccatcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaacctcaaaagaaaagggtttgggccgggcgtcatttggctcatgcctgtaatcccaacactttgggtagggcctagatgggaggattgcttgagcccaagaattctaggccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgtagacccagctactcaggaggctgaggcatgagaatcacttgaacgcaggaggcagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagttagactgtctc-aaaaaaaaa---aaaaaa-----aaaaaaaaacaggaaagagttcagaagagcttcctggttggtgaacccgggtgcatccgtgtgccaggactgtggtgcaccccaggtccacagggacagaagcttctgcactttgggctcctctaaacctccccctacgcatctcttccttggctgttcattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56782335 799 + 60714840 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAAAGATAAACATGAAAGAGGTATCTCTTGTTTTGTATACCCAGGCCCTACAACCACATCTGAGCttatgttaatgaggtgacttttggaaagcccctagataaccccacaagggcgggggactggctgccaaagaaaccgtcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaaccccaaaagaaaagggtttgggccgggcatcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggactgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgcagacccagatactcaggaggctgaggcatgagaatcacttgaacgcaggaggcagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagtgagactgtctc-aaaaaaaaaaacaaaaaacaaacaaaaaaaaacaggaaagagttcagaagagcttcctggttggtgaatcggggtgcatccgtgtgccaggactatggtgcaccccaggtccacagggacagaagctcctgcacttgggactcctctaaacctcctcctgtgcatctcctccttggctgttcattt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60607801 786 + 64156825 aaaGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaagggcgggggactggctgccgatga------caacgattagacattaggaactttcagccccaggctccaagtgtcctccagggaggggagaggcgccgaaggttgaattgattatgaactgccagctatgtgatcatcagcatagcccacctaaggaatcctccagaaactccaaaaggaaagggtttgggccgggcgtcctgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaagatagcaagaccctagctctac--aaaaaaaatgaaaaatgagccaggcatggtggagtgcacctgtggaccccgctactcaggaggctgcggtgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctc-----aaaaa---aaaaaa-----aaacaaaaacacgaaagagttcagaagagcttcctggttggtgaactggggtgcacccatgtgccaggactgtggtgcaccccaggcccacagggacagaaactcctgcactcgggactcctctgaacctcccccaatgcatctcctccttcactgttcattt i rheMac3.chr19 I 308 C 0 s macFas5.chr19 55747728 791 + 59248254 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaagggcgggggactggctgccgatga------caacgattagacattaggaactttcagccccaggctccaagtgtcctccagggaggggagaggctccgaaggttgaattgattatgaactgccagctatgtgatcatcagcatagcccacctaaggaatcctccagaaactccaaaaggaaagggtttgggccgggcgtcctgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaagatagcaagaccctagctctac--aaaaaaaatgaaaaattagccaggcatggtggagtgcacctgtggaccccgctactcaggaggctgcggtgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctcaaaaaaaaaa---aaaaaa-----aaaaaaaaacacgaaagagttcagaagagcttcctggttggtgaactggggtgcacccatgtgccaggactgtggtgcaccccaggtccacagggacagaaactcctgcactcgggactcctctgaacctcccccaatgcatctcctccttcactgttcattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47853095 770 + 51301725 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGTTTATGTTAACGAGGTGATTTTTGGAAAGCCCCTAGATAACCCCACAAGGGCGGGGGACTGGCTGCCGATGA------CAACGATTAGACATTAGGAACTTTCAGCCCCAGGCTCCAAGTGGCCTTCAGGGAGGGGAGAGGCGCTGAAGGTTGAATTGATTATGAACCGCCAGCTATGTG---ATCAGCATTGCCCACCTAAGGAATCCTCCAGAAACTCCAAAAGGAAAGGGTTTGGGCCGGGCAtcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggaatgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctacaaaaaaaaaatgaaaaattagccaggcatggtggagtgcacctgtggacccagctactcaggaggctgaggcgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgcca--------cagcctgggtgacggagtgagactgtctc---------------aaaa-----aaaaaaaaacacgaaagaGTTCAGAAGAGCTTCCTGGTTGGTGAACCGGGGTGCACCCATGTGCCAGGACTGTGGTGCACCCCAGGTCCACAGGGACAGAAACTCCTGCACTCGGGACTCCTCTAAACCTCCCCCAATGCATCTCCTCCTTCGCTGTTCAttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47561893 783 + 50890351 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAAGTGAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTACAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaatcgcgggggactggctgccgatga------cagcgattagacattaggaactttcagccccaggctccaagtggcctccaggaaggggagaggcgctgaaggttgaattgattatgaaccgccagctatgtgatcatcagcatagcccacctaaggaatcctccataaactccaaaaggaaaaggtttgggccgggcgtcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctac-aaaaaaaaatgaaaaattagccaggcgtggtggagtgcacctgtggacccagctactcaggaggctgaggcgtgagaatcacttgaatgcaggaggcacaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctc---------a---aaaaaa-----aaaaaaaaacatgaaagagttcagaagagcttcctggttggtgaaccggggtgcacccatgtgccaggactgtggtgcaccccaggtccacagggacagaaactcctgcactcgggactcctctaaacctcccccaatgcatctcctccttcgctgttcattt i chlSab2.chr6 C 0 I 2884 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=20176.000000 s hg38.chr19_GL949748v2_alt 930254 16 + 1064304 gtatcctttaaaatat s panTro4.chr19 59867429 16 + 63644993 gcatcctttaaaatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56783134 16 + 60714840 atatcctttaaaatat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60608587 16 + 64156825 acatcctttaaaatat i rheMac3.chr19 C 0 I 3003 s macFas5.chr19 55748519 16 + 59248254 atatcctttaaaatat i macFas5.chr19 C 0 I 2920 s papAnu2.chr19 47853865 16 + 51301725 atatcctttaaaatat i papAnu2.chr19 C 0 I 5245 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I a score=178653.000000 s hg38.chr19_GL949748v2_alt 930270 735 + 1064304 gaaagggcgggttgcccctccacacctgtgggcatttctcgttaggtggaaggagagacttggaaaagaaagagacac--agacaaagtatagagaaagaaataaggggacccaggggaccagcattcagcatatggaggatcccgccagcttctgagttcccttagtatttattgatcattttggggtgtttctcagagagggggatgtggcagggtcataggataatagtggagggaaggtcagcagataaacacgttaacaaaggtctctgcatcatagacaaggtaaagaactaagtgctgtgctttagatatgcatacacataaacatctcaatgccttacggagcagtattgctgcccgcatgtcccacctccagccctaaggcggttttcccctatctcagtatatggaatatacaatcggggtttacacccatacattccattgcccagggacgagcaggagacagatgccttcctcttgtctcaactgcaaagaggtgttccttcctcttttactaatccgcctcagcacagaccctttactggtgtcgggctgagggacggtcaggtctttcccttcccatgagaccata--tttcaggctatcacatggggagaaaccctggacaatacctggct--ttcctaggcagaggtccctgcggccttccgcagtgtttgt--gtccctgggtacttgagattagggagtggtga-tgactcttaaggagcatgctg s panTro4.chr19 59867445 735 + 63644993 gaaagggcaggttgcccctccacacctgtgggcatttctcgttaggtggaaggagagacttggaaaagaaagagacac--agacaaagtatagagaaagaaaaaagggggcccaggggaccagcgttcagcacacggaggatcccgccagcttctgagtttccttagtatttattgatcattttggggtgtttctcggagagggggatgtggcagggtcataggataatagtggagagaaggtgagcaggtaaacacataaacaaaggtctctgcatcatagacaaggtaaagaactaagtgctgtgctttagatatgcacacgcataaacatctcaatgccttacagagcagtattgctgccctcaagtcccacctccagccctaaggcggttttcccctatctcagtagatggaatatacaatcggggtttacacccatacattccattgcccagggacgagcaggagacagatgacttcctcttgtctcaactgcaaagaggtgttccttcctcttttactaatcctcctcagcacagaccctttacgggtgtcgggctgggggacggtcaggtctttcccttcccacaaggccata--tttcaggctatcacatggggagaaaccctggacaatacctggct--ttcctaggcagaggtctctgcggccttccgcagtttttgt--gtccctgggtacttgagattagggagtggtga-tgactcttaaggagcatgctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56783150 741 + 60714840 gaaggggtgggttgcctctccacacctgtgggcatttctcgttaggtggaacaagagacttggaaaagaaagagacacagagacaaagtatagagaaagaaaaaagggggcccaggggagcggcgttcagcacacggaggatccc-caggcctccgagttcccttagtatttattgatcattcttcagtgtttctcggagaggaggatgtggcaggatcacaggataatagtggagagagggtcagcaggtgaacacgtgaacaaagg--tctgcatcatagacaaggtaaagaattcagtgctgtgctttagatatgtatacacataaacatctcagtgccttgaagagcagtattgctgccctcatgtcccacctccagccctaaggctgttttcccctatctcagtagatggaatatacaatcggggtttacacccagacattccattgcccagggacgagcaggagacagatgccttcctctggcctcaactgcaaagaggccttcctttctcttctactaatcctcctcagtacagaccctttacgggtgttgggctgggggacggtcagatctttcccttcccaggaggccatatctctcaggctatcacatggggagaaaccttggacaatacctggctaagggcaaggcagaggtccctgcggccttccgcagtgttttttaatcgctgggtacttgaaattagggagtggtgagtgactcttaactagcatgctg i ponAbe2.chr19 C 0 I 7626 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55748535 2920 + 59248254 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=314621.000000 s hg38.chr19_GL949748v2_alt 931005 3528 + 1064304 ccttcaagcatttgtttaacaaagcacatcttgcacagcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcatagattaacagcatctcaaggcagaagaatttgtcttagtacagaacaaaatgaagtctcctgtgtctacttctttctacacagacacagttacaatctgatctctctttcttttccccacaAAAATATCCTTTGTAgaccaggcacagtggctcaggcctgtaatcccagcactttgggaggctgaggcagatggatcacttaaggtcaggagtttgagaccagcccagccagcatggtgaaactgcgtctctacaaaaatacaaaaattagcggggcatggtagttcaacgcctgtaatcccagctactcgagaggctgaggcagaattgtttgaacccgggaggcagaggcagaggttgcagtgagccgaggtcgcacgactgcactccagcctgggtgcaacagagtgagactccatctcaaaaaacaaaaaacaaaaacaaaaacaaaacaaaaaatgaaaacccacttttagtaaaaaaaataaaaatgaaaaaatgtgaatcaggctgcactctggcccacatcctggctgctgtgtatcacgtggctctagacactgcacttttgcctcctcatcattgctgtagataggatttctgacagcagggtcattagacgaa--tttttttttttttttgagacggagtctcgctctgtcgcccaggctggagggcagtggcgcaatctctgctcactgcaagctccgcctcccgggttcacacaattctcctgcctcagcctcccgaatagctgggactacaggtgcctgcaaccatgcctggctaattttttttgtatttttagtagagacgcggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatcctcccgcctaggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccccattagacaaatttgtatctgcacggttcctacagataaactctgggacattagaattataaggcttttgtttaaggatggtttcagatgtttttcagaccttgaattccagccaaatagctgacactaaccagtttgaagaccccagtgaggaatgggatcagcatgagaacactgcgtcttcatgcccctgtctccgccagcagtcagcatggccacactctggcccacaccaaaacacttaaaaaccctagccccggccgggtgcagaggctcacacctgtaactccagcactttgggaggccaaggcaggtgaatcacctgaggtcaagagttcaagaccagcctggccaacatagtgaaaccccgtttctactaaaaacacaaaaaattagtcgggcgtggtagcgggtgcctgtaaccccagctactcaggaggctgaggcaagagaattacttgaacctgggaggcggaggttgcagtgagcaaagatcctgccactgcactccagcctgggtgacaaagcaaaactccatctcaaaaa--aaaaaaaaaccctagacccaaacttctgggggagatggattggaggtttcctcccatctcctcattcctcagccctgtgattaaacttccttctcttctgcaacacagtgacccggcaaattgactcacagcgtgcattgggcaacggacctactgtcagaggcgtgtaaccagggcaactccatcttgaataggagctgactaaaataaggctgagacctaccgggctgcattcccagacagttaaggcattctcca--------aaaaaaacaaaaatgacaggcacggtggcccagcactttgggaggccgaggcgggtggattacccgaagtagagtttgagaccagcctggccaacacggtgaaaccccgtctctactgaaaatacaaaaattagtcaggcgtggtggctcgtgcctgtaatcccacctacttgcgaggctgaggcaggagaatcgcttgagccggggaggcggaggttgcagtaaaaag-aaaaaaaaaagcattctaagtcacaggatgagataagtcagcacaagatacaggtcataaggaccttgctgataacacaggtagcaatgtagcaggaccagccacagacaaaactcctcagacaccgagttaaagaagaaaggggtttatccggccaggggcatcggcaagactcccgtctcaagagccgagatccccaagtgagcaattcctgtcccttttaagggctcacaactctaagggggtgtgcgtgagagggtcgtgatcgactgagcaagcagggggtacgtgactgggggctgcatgcactggtaatcagatccaaacaaaacaggatagggattttcacagtgcttttctatacaatgtctgtaatctatagataaccgattaggtcaggggtcaatctttaactaccaggcccagggtgtggcgccgggctgtctgcttgtggatttcattcctgggccgcggggc------------------------------------tgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcatttctgccttttagtttttactttttctttctttggaggtggaaattgggcataagacaatatgaggggtggtctcctcccttagcaataaagaatccagccaggccgggcgcggtggctcacacctgtaatcccagcactttcgggggctgaggcgggtggatcacacggtcaggagattgagaccatcctggctaacacggtgaaa--ccatctctactaaaaaaaaaaaatacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggtgatggagcttgcagtgagcggagatcgcgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaataaaaaataaataaaaataaataaagcatccagtcaaactccatcaaaaccaagatagtgacgagagtaacctctggttgtcctcaccgctccactcccagcagccccatgacagtttacaaatgccatggcaatgtcaggaagttaccctatgctgtctaaaaaggggaggcatgaataatccaccccttgtttagcatatccatagaaataaccataaaaatgggcaaccggccgggcgcggtgg-tcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaatcccatctctactaaaaaaaaatacaactaattagctgggtgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccgagatagtgccactgcactctggcctggtgaaagagcgagactccgtctcaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59868180 3545 + 63644993 ccttcaagcatctgtttaacaaagcacaccctgcacagcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacggggttgggggtaaggtcatagattaacagcatctcaaggcagaagaatttgtcttagtacagaacaaaatggagtctcctgtgtctacttctttctacacagacacagttacaatctgatctctctttcttttccccacaAAAATATCCTTTGTAgaccaggcacagtggctcaggcctgtaatcccagcactttgggaggctgaggcagatggatcacttaaggtcaggagtttgagaccag-ccagccaacatggtgaaactgcgtctctacaaaaatacaaaaattagccgggcatggtagctcaatgcctgtaatcccagctactcgagaggctgaggcagaattgtttgaacctgggaggcagaggcagaggttgcagtgagccgagatcgcacgactgcactccagcctgggtgcgacagagtgagactctatctcaaaaaac------taaaaacaaaaacaaaacaaaaaaTGAAAACCCGCttttagtaaaaaaaataaaaatgaaaaaatgtgaatcaggctgcactctggcccacgtcctggctgctgtgtatcacgtggctctagacactgcacttttgcctcctcatcattgctgtagataggatttctgacagcagggtcattagatgaatttttttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcaatggcgcaatctctgctcactgcaagctccgcctcctgggttcacacaattctcctgcctcagcctcccgaatagctgggactacaggtgcctgcaacaatgcccggctaattttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccccattagacgaatttgtatctgcacggttcctacagataaactctgggacattagaattataaggcttttgtttaaggatgg-----------tttcagaccttgaattccagccaaatagctgacactaaccagtttgaagaccccagcgaggaatgggatcagcatgagaacaccgcgtcttcatgtccctgtctccgccagcagtcagcatggccacactctggcccacaccaaaacacttaaaaaccctagccctggccgggtgcagaggctcacacctgtaactccagcactttgggaggccaaggcaggtgaatcacctgaggtcaagagttcaagaccagcctggccaacatagtgaaaccccgtttctactaaaaacacaaaaaattagtcgggcgtggtagcgggtgcctgtaaccccagctactcaggaggctgaggcaagagaattacttgaacctgggagggggaggttgcagtgagcaaagatcctgccactgcactccagcctgggtgacaaagcaaaactccatctcaaaaaacaaaaaaaaaccctagacccaaacttctggggcagatggattggaggtttcctcccatctcctcattcctcagtcctgtgattaaacttccttctcttctgcaacacagtgacccggcaaattgactcacagcgtgcattgggcaacggacctactgtcagaggcgtgtaaccagggcaactccatcttgaataggagctgactaaaataaggctaagacctaccgggctgcattcccagacagttaaggcattctccaaaaaaaacaaaaaaacaaaaatgccaggcacggtggcccagcactttgggaagccgaggcaggtggattacccgaagtagagtttgagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaattagtcaggcgtggtggctcgtgcctgtaatcccagctacttgcgaggctgaggcaggagaatcgcttgagccggggaggcggaggttgcagtaaaaagaaaaaaaaaaagcattctaagtcacaggatgagataagtcagcacaagatacaggtcataaggaccttgctgataacacaggtcgcaatgtagcaggaccagccacagacaaaactcctcagacaccgagttaaagaagaaaggggtttattcggccaggggcatcggcaagactcccgtctcaagagccgagatccccaagtgagcaattcctgtcccttttaagggctcacaactctaagggggtgcgcgtgagagggtcgtgatcgattgagcaagcagggggtacgtgactgggggctgcatgcaccggtaatcagatccaaacaaaacaggatagggattttcacagtgcttttctatacaatgtctgtaatctatagatgaccgattaggtcaggggtcaatctttaactaccaggcccagggtgtggcgcggggctgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcattcctggggcgccgggatgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcatttctgccttttagtttttactttttctttctttggaggtggaaattgggcataagacaatatgaggggtggtctcctcccttagcaataaagaatccagccaggccgggcgcggtggctcacgcctgtaatcccagcactttggggggccgaggcgggcggatcacaaggtcaggagattgagaccatcctggctaacacagtgaaaccccgtctctact-------aaaaatacaaaaaattagccgggcttggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggtgatggagcttgcagtgagccgagatcgcgccaccgcactccagcctgggtgacagagcaagactccgtctcaaaaaaataaaaaat------aaataaataaagcatccagtcaaactccatcaaaaccaagatagtgacgagagtaacctctggttgtcctcaccgttccactcccagcagccccatgacagtttacaaatgccatggcaatgtcaggaagttaccctatgcggtctaaaaaggggaggcatgaataatccaccccttgtttagcatatccatagaaataaccataaaaatgggcaaccggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcc-aggcgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctact-aaaaaaaatacaacaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccgagatagtgccactgcactctggcctggtgaaagagcgagactccgtctc--aaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56783891 7626 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55748535 2920 + 59248254 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=174656.000000 s hg38.chr19_GL949748v2_alt 934533 235 + 1064304 aaaaaGGGCAACCGAggccggacgtggtggcttacgcctgtaatcccaacactttgggaggccgaggcgggcatatcacctgagctcaggaggtcaagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacgtgatggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactgaagtgattcaag s panTro4.chr19 59871725 235 + 63644993 aaaaaGGGCAACCAAggccggacgtggtggcttacgcctgtaatcccaacactttgggaggccgaggcgggcatatcacctgagctcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacgtgatggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcaagtgattcaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56791517 228 + 60714840 aaaatgggcaaccaaggctgggcttggtggctcactcctgtaatcccaacacttcaggaggctgaggcgggcagatcacctgaggtcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacctgatggcaggcgcctgtaatcccagctactcaggaggccgaggcaggagaatcacttgaacccagg-------aa i ponAbe2.chr19 I 7626 C 0 s macFas5.chr19 55751455 221 + 59248254 aaaatgggcaaccaaggctgggtgtggtggctcacgcctgtgatcccaaccctttcagaggcctacacaggtggatcacctgaggtcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaataaaaaaattag-------tgatggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccggg-------ag i macFas5.chr19 I 2920 C 0 s chlSab2.chr6 47565560 221 + 50890351 aaaatgggcaaccaagaccgggtgtggtggctcatgcctggaatcccaacactttcagaggcctatgcaggcagatcacctgaggtcaggaggtggacatcagcctggccaacatggtgaaacctcatctcttactaaaaatacaaaaattag-------tgatggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccagg-------ag i chlSab2.chr6 I 2884 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=331917.000000 s hg38.chr19_GL949748v2_alt 934768 283 + 1064304 gcagaggtttcagtgagccaagatcacgccactgcactccagcctgggcgacaagagcaaaactccatctc--aaaaaaaataagggcaactagcagccctatgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgcttccactttactccatagtctcgccctgaattctttctggtatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAATATCATTGGTggccgggcgcggtggctcac s panTro4.chr19 59871960 283 + 63644993 gcagaggtttcagtgagccaagatcacgccactgcactccagcctgggcgacaagagcaaaactccatctc--aaaaaaaataagggcaaccagcagccctatgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgctttcactttactccatagtctcgccctgaattctttctggtatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAATATCATTGGTggccgggcgcggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56791745 282 + 60714840 gcagaggttgcagtgagccaagatcacaccattgcact-cagccggggcgacaaaagcaaaactccatctc--aaaaaaaataagggcaaccaggagccctacgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgctttcactttactccatgatcttgccctgaattctttctggcatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAGTATCATTGCTggccgggcgcggtggctcac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60611606 274 + 64156825 gcagaggttgcagtgagccgagatcgcgccattgcactccagtcttggcaataagagtaaaactccctctcaaaaaaaaaataagggcaaccagcagccc-----------gtctatggagtagctattcttttattcgttcactttcctaataagcttgctttcactatactccatggacctgccctgaattctttctggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTGCTTTTAAAAAGTATCATTGGTGgctggacatggtggctcac i rheMac3.chr19 I 3003 C 0 s macFas5.chr19 55751676 274 + 59248254 gcagaggttgcagtgatctgagatcacgccattgcactccagcctgggcaacaagagcaaaactccatctcaaaaaacaaataagggcaaccagcagccc-----------gtctatggagtagctattcttttattcgttcactttcctaataagcttgctttcactatactccatggacctgccctgaattctttctggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTGCTTTTAAAAAGTATCATTGGTggctggacaccgtggctcac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47565781 274 + 50890351 gcggaggttgcagtgatctgagatcacgccattgcactccagcctgggcaacaaaagcaaaactccatctccaaaaaaaaataaaggcaactagcagccc-----------gtctgtggagtagctattcttttattccttcactttcctaataagcttgctttcactatactccatggacctgccccgaattctttccggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTACTTTTAAAAAGTATCATTGGTggccggacacagtggctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=110530.000000 s hg38.chr19_GL949748v2_alt 935051 136 + 1064304 gcctgcaatcccagcactttgggaggccaaggctggcggatcacctgaggtccgaagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaatac-aaaaaaattagctgggtgtggtggtgcgt s panTro4.chr19 59872243 136 + 63644993 gcctgcaatcccagcactttgggaggccaaggctggcggatcacctgaggtccgaagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaatac-aaaaaaattagctgggtgtggtggtgcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792027 137 + 60714840 gcctgtaatcccagcacttcaggaggccaaggctggcagatcacctgaggtcagaagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaatacaaaaaaaattagctgggcgtggtggcacgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55751950 137 + 59248254 gcttgtaatcccagcactttgggaggacaaggcgagcggatcacctgaggtcagatgttcaagaccagcctgaccaacatggagaaactccatctgtactaaaatacaaaaaaaatcagctggctgtggtggtgcat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47566055 137 + 50890351 gcctgtaatcccagcactttcggaggccaaggcgggcggatcacctgaggtcagacgttcgagaccagcctgaccaacatggagaaaccccatctgtactaaaatacaaaaaaaattagctgggtgtggtggtggat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60611880 0 + 64156825 C a score=172977.000000 s hg38.chr19_GL949748v2_alt 935187 145 + 1064304 gcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggtggcagaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagtgaaactccgtctcaa------------------------------------aaataaataaataaa s panTro4.chr19 59872379 145 + 63644993 gcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggtggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagtgaaactctgtctcaa------------------------------------aaataaataaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792164 157 + 60714840 gccggtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccccggtggcagaggttgcagtgagccgagatcatgccattgcactccaacctgggcaacaagagtgaaactctgtctcaa------------------------aaataaataaataaataaataaataaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60611880 145 + 64156825 gcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagatcgcaccactgcactccagcctgggcaacaagagtgtaactccatctcaa------------------------------------aaataaataaataaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55752087 181 + 59248254 gcctgtaattccagctacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagatcgcaccactgcactccagcctggacaacaagagtgaaactgcatctcaaaactaaataaataaataaataaataaataaataaataaataaataaataaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47566192 144 + 50890351 gcctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagagcgcaccactgcactccagcctgggcaacaagagt-taactccatctcaa------------------------------------aaataaataaataaa i chlSab2.chr6 C 0 I 1756 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=175847.000000 s hg38.chr19_GL949748v2_alt 935332 222 + 1064304 aTCATTGGAATAATTTTCTTCTTTAGGAAGAGCAGCCTTGggccaggcatggtggcacatgcctggaatccccgaactttgggcagcccaggtaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgatgaaacctcttcttgatcaaatatacagaatttcgactgagcacagtggctgtaagcccagcatgttgggaagctgaggt s panTro4.chr19 59872524 222 + 63644993 aTCACTGGAATAATTTTCTTCTTTAGGAAGAGCAGTCTTGggccaggcatggtggcacatgcctggaatccccgaactttgggaagcccaggcaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgacgaaacctcttcttgatcaaatatacaaaaTTTCGACTGAGCACAGTGGctgtaagcccagcatgttgggaagctgaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792321 222 + 60714840 ATCATTGGAATAATTTTCTTCTTTAGGAACAGCAGCCTTGggccaggcatggtggcacatgcctggaatcccagaactttgggaagcccaggcaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgacaaaacctcttctccatcaaatatacaaaatttcgactgagcacagtggctgtaatctcagcacattgggaagccgaggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60612025 229 + 64156825 aTCAGTGGAATAATT---TTCTTTAGGAAGAGCAGCCTTGAgccaggcatggtggcacatgcctggaatcccaggactttgggaagcccaggcaggtggattgcttgagcttccacctgcctgggagttccagaccagcctgaacaacatgacaaaacctcatctcaataaaatataccaaatttcgattgagcctggtggctgtaatcccagcatgttgggaagccgaggT i rheMac3.chr19 C 0 I 1441 s macFas5.chr19 55752268 228 + 59248254 ATCAGTGGAATAATT---TTCTTTAGGAAGAGCAGCCTTGAgccaggcatggtggcacatgcctggaatcccaggactttgggaagcccaggcaggtggattgcttgagcttccacctgcctgggagttccagaccagcctgaacaacatgacaaaacctcatctcaataaaaTATACCAAATTTCGATTGAGCCTGGTGGctgtaatcccagcatgttgggaagccgagg- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=70725.000000 s hg38.chr19_GL949748v2_alt 935554 211 + 1064304 gggtgaatcatttgaggtcagaccagcctgactaacatggcgaaaccccatctctacaaaaaatacaaaagttagccagga--ggtcgtgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatgacgtgaatcccggagtcgtaggttgcagtgagccaagatcgtgccactgcacttcagcctgggcgacacagcaagact s panTro4.chr19 59872746 211 + 63644993 gggtgaataatttgaggtcagaccagcctgactaacatggcgaaaccccatctctacaaaaaatacaaaagttagccagga--ggtcgtgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatgacgtgaaccccggagtcgtaggttgcagtgagccaagatcgtgccactgcacttcagcctgggcgacacggcaagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792543 211 + 60714840 gggtgaatcatttgaggtcagaccagtctgactaacatggtgaaaccccatctctactaaaaatacaaaaattagccagga--ggtggtgggcgcccgtggtcccagctactcgggaggctgaggcagaagaatggtgggaacccgggaggcggagcttgcagtgagccgagatcatgccactgcactccagcctgggcgaaagagcaagact i ponAbe2.chr19 C 0 I 1814 s macFas5.chr19 55752496 139 + 59248254 ----------tttgaagtcagaccagc----ctaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggcatgggggtgaacgtccataatctcagctactcgggaggctgaggcatgacaatcacttgaacccgggaggct------------------------------------------------------------ i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=212369.000000 s hg38.chr19_GL949748v2_alt 935765 984 + 1064304 gaggttgcagtgagctgtgatcctcaacctcctgggttcaagggattgtcgagcctcagcctcccaagtagctgggattatagacattcgctcccatgcctggctaatttttgtattGCAAAAATGCACTCCagcctagatgacaggactgcactccagcctggatgacagagcaagactgtgtctcaaaaataaataaataaataaataaataGCCAACTgtgatcgtgcatgcctgtagtcccagctactcaggaggccaaggcaggaggatcacttgagactgggaggtcatggctacagtgagccatgatctcgcaactgcactccagcctgggcaacagagggagaGA--------------------------------------------------------------------------------------------------------------------aaggaaggaaggagggaaggagggaaggagggaagggaaggagggaaaggaagtcagtcttgtgggacaaggaaggaaggaagga----agTCAGTcagtcttgtgggactcagccctgaacctttgggatctgatgctgtccccaggtagggagtgtcagaactaaatcaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacatacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGgactgggtatggtggttcatgcctgtcattccaggattttgggaggccaaggcaggcggatcacttgaggtcaggactttgagaccaccctggtgaacatggcaaaaccccatctctactaaaaaaaaatacaaaaattagctgggcgcggtggcaggtgcctgtaataccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagctgagattgtgcctttgcactccagcctgggagacagagcaagactctccctcaaaa--aaaaaaaaaggccgggcgcagtggctcacgcctataatatcagcactttgggaggccgaggcaggT s panTro4.chr19 59872957 990 + 63644993 GGGGTTGCAGTGAGCTGTGATcctcaacctcctgggttcaagggattgtcgagcctcagcctcccgagtagctgggattatagatgttcgctcccatgcctggctaatttttgtatCGCAAAAATGCACTCCagcctagatgacaggactgcactccagcctggatgacagagcaagactgtgtctcaa----aaataaataaataaataaataGCCAACTgtgatggtgcatgcctgtagtcccagctactcgggaggccaaggcaggaggatcacttgagactgggaggtcacggctacagtgagccgtgatctcgcaactgcactccagcctgggcaacagagggagaGAaag------------------------------------------------------------------------------------------------------------gaaggaaggaaggaaggagggaaggagagaaggagggaagggagggagggaaaggaagTCAGTCTTGTGGGACAAGGAAGGAAGGAAGGAAGTCAGTCAGTcagtcttgtgggactcagccctgaacctttgggatctgatgctgtccccaggtagggagtgtcagaactaaatcaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacatacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGgactgggcatggtggctcatgcctgtcattccaggattttgggaggccaaggcaggcggatcacttgaggtcaggactttgagaccaccctggtgaacatggcaaaatcccatctctact--aaaaaaatacaaaaattagctgggcgcggtggcaggtgcctgtaataccagctactcgggaggctgaggcaggggaatcacttgaacccgggaggcggaggttgcagtgagctgagattgtgcctttgcactccagcctgggagacagagcaagactctccctcaaaa--aaaaaaaaaggccgggcgcagtggctcacgcctataatatcagcactttgggaggccgaggcaggT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55752635 1014 + 59248254 gaggttgcagtgaactgtgatcATCAACAC---------------------------------------------AATTGCAAAAA------------------------TTGCAATACAAAAATGCACTCCAGCCTAGATGACAGGACTGCACTccaggctggatgacagagcaagactgtgtctcaa-------taaataaataaataaatagccaactgtgatggtacatgcctctagtaccagctactcaggaggccaaggcaggaggatcatttgagactgggaggtaaaggctgcagtgagccgtgatctcgtaactgcactccagcctgggcaacagagggagaGgaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagaagagaagagaaggagaaagagagagagagagagagaGAGggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg--aaggaaggaag------gaaggaaggaaggaaggaagga----ag---ggcagtcttgtgggactcagccctgaacctgtgggatctgatgctgtccccaggtagagagtgtcagaaccgaaccaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacaaacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGggccgggcgccgtggcgcatgcctgtcatcccaggattatgggaagccagggcaggcagatcacttgaggtcaggactttgagactaccctggtgaacatggcgaaatcccatctctaat-taaaaaaatacaaaaattagctgggcgcagtggagcgcacctgtaataccagctactccggaggatgaggcaggagaatcacttgaatctgggaggcggaggttacagtgagccgagattgtgccactgctctccagcctgggagatagagcaagactccatctcaaaaacaaacaaaCAggccaggcgctgtggctcaagcctgtaatcccagcactttgggaggccgagacgggc i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56792754 1814 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=3645.000000 s hg38.chr19_GL949748v2_alt 936749 7 + 1064304 ggatcac s panTro4.chr19 59873947 7 + 63644993 ggatcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56794568 7 + 60714840 ggattac i ponAbe2.chr19 I 1814 C 0 s macFas5.chr19 55753649 7 + 59248254 ggatcac i macFas5.chr19 C 0 I 584 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=610591.000000 s hg38.chr19_GL949748v2_alt 936756 2366 + 1064304 tgacacccaacaccacgccttctaattttttgcatttttagtagaaacggggtttcaccatgttggccaggcttgtctcgaactcctgtcctctggtgatccacctgccttggcctcccaaagtgctggaattacaggcgtgaaccCAGCAACTTTTCCCCCTTTTATCATACCTTAATTTGCCTCCACCACCCCCAGAAGCTCCAAGTCTCTACGCCTTTTCatttatgtatgtatgtatttatttatttatttatttattttattttgagacagggtctccctctatctcccaggctgcagtgcagtggcgtgatcttggcccactgcaacctccacctcccgggttcaagtaatcctcctgtctcagcct----cccaagtagctgggattacagggcacaccaccacacctggctaatttttgtatttttagtggagactgggtttcaccctgttgtccaggctagtctcaaactcccgacgtcaggtgatccacccatttcggttcccaaagtgttgagattacagaccgtgagccactgGGACG---GACACCCCTACTCCTTTCttcttcttc-------ttctttttttttttttttttgagatggagtctccctttgaagcccaggctggagtacaatggtgcgat-----cttagctcactgcagtttcctcctcccgggttcaagtgattctcctgcctcagcctccggagtagctgggattacaggcacacaccaccacaccagctaatttttgtatttttagcagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccaccttggcctcccaaactgctgggatcacaggcgtgagccactgcacccTACACTCTTAtactcctttctgtagctcaggcagctagatgagcttcaatcatctggcccttcctccagtctcacatttttgtgggactcctgtgcatacataattgaatctggtttttcttctgtcaaactgttttgtgtcaatgtaattcatagcccatccaaagaacctaggagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaagagttcaagactggcccggtgtacaaagtgagacccagtctctatttaaaaaaGATGGGGAGGGggccgggcacggtgtctcacgcctgtaattccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtccgagactagcctggccaaggtggtgagaccgtgtctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgGTTTGGGATTTTCTCCCTGAGGCACTTGCTATCTCCAGGATTATGGGTCTCAGGTGAAagaaagacaaagaaggagagagagac--agagagggacagggaaagagaaTTTCAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGGCTAGGTAAAAATGAACATGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgcagtggctcacgcctctaatcccagcactttgggacgccgaggtgggcgaatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagttagctagctgggcatagtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttgaacccgggaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctca------------------aataataataataataataaCTAGTggccaggcacagtggctcacgcctgtaatcccagtgtagcaggacgagccacagacaaaaacctctcagacaccgagttgtagaaggaagggc-tttattcagctgggagcatcggcaagctactgtcttaaaatccaagctcctcgagtgcacagtttctgtcccttttaagggctcacaacactaaagactgcgcatgaaagggtca----tgattgagcaatctaggggatacataacaggggtttcgtgcactgctggtcagagagaa--agaatagggcagggagtttcacagtgttcttctatacaatgcctggaatctatggataacatcgggttctaagtcatgagttgatttttatctactaggtttacgccaggcaggcccaggcctggtttcgggtctggttttgggtctggtgcctggcgccgggctacctgcctttggtttcacttccttgtttttttct s panTro4.chr19 59873954 2364 + 63644993 tgacacccaacaccacgccttctaattttttgcatttttagtagaaacggggtttcaccatgttggccaggcttgtctccaactcctgtcctctggtgatccacctgccttggcctcccaaagtgctggaattacaggcgtgaaccCAGCAACTTTTCCCCCTTTTATCATACCTTAATTTGCCTCCACCACCCCCAGAAGCTCCAAGTCTCTACGCCTTTTCATTTATGTATGTATG----------------TATGTAttttattttgagacagggtctccctctatctcccaggctgcagtgcagtggcgtgatcttggcccactgcaacctccgcctcccgggttcaagtaatcctcttgtctcagcct----cccaagtagctgggattacagggcacaccaccacacccggctaatttttgtatttttagtggagactgggtttcaccctgttgtccaggctagtctcaaactcctgacgtcaggtgatccacccatttcggttcccaaagtgttgagattacaga-cgtgagccaccgGGACG---GACATCCCTACTCCtttcttcttcttc-------------ttttttttttttttgagatggagtctccctttgtagcccaggctggagtacaatggtgcgat-----ctcagctgactgcaacctccgcctcctgggttccagtgatcctcctgcctcagcctccagagtagctgggattacaggaacacaccaccacaccggctaatttttgtatttttagcagagatggggtttcatcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacgttggcctcccaaagtgctgggatcacaggcgtgagccacctcacccTACACTCTTAtactcctttctgtagctcaggcagctagatgagcttcaatcatctggcccttcctccagtctcacatttttgtgggactgctgtgcatacataattgaatctggtttttcttctgtcaaactgttttgtgtcaatgtaattcatagcccatccaaagaacctaggagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaagagttcaagactggcccggtgtacaaagtgagacccagtctctatttaaaaaaGATGGGGAGGGggccgggcacggtgtctcacacctgtaattccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtccaagactagcctggccaaggtggtgagaccgtgtctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgGTTTGGGATTTTCTCCCTGAGACACTTGCTATCTCCAGGATTATGGGTCTCAGGTgaaagaaagacaaagaaggagagagagacagagagagggacagggaaagagaATTTCAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGGCTAGGTAAAAATGAACATGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgcggtggctcacgcctctaatcccagcactttgggatgccgaggtgggcgaatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagttagctagctgggcatagtggtgcatacctgtaatcccagctactctggaggctgaggcaggagaatcgcttgaacccgagaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctcaaataataataataataataataataataataataataaCTAGTggccaggcacagtggctcacgcctgtaatcccagtgtagcaggacaagccacagac-aaaacctctcagacaccgagttgtagaaggaagggc-tttattcagctgggagcatcggcaagctactgtcttaaaatccaagctcctcgagtgcacagtttctgtcccttttaagggctcacaacactaaagactgcgcatgaaagggtcg----tgattgaacaatctaggggatacgtaacaggggtttcgtgcactgctggtcagagagaaacagaacagggcagggagtttcacaatgttcttctatacaatgcctggaatctatggataacatcgggttctaagtcatgagttgatttttatctactaggtttacgccaggcaggcccaggcctggtttcgggtctggttttgggtctggtgcctggtgcccggctacctgcctttggtttcacttccttgtttttttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56794575 2374 + 60714840 tgacacctaccaccacgcctgctaattttttgtatttttagtataaagggggtttcaccatgttggccaggcttgtctcgaactcctgtcctctggtgatccacctgcctcggcctcccaaagtgctggaattacaggcatgaaccCAGCAACTTttcccccttttatcataccttaatttgcctccaccacccccagaagctccaagtctctactccttttcatgtatgtatgtatg----tatgtatgtatgtatttattttattttgagacagggtctccctctatcttccaggctggagtgcagtggcgtgatcttggcccactgcaacctccacctcccaggttcaagtaatcctcctgtctcagcctcccgcccgagtagctgggattacagggcacaccaccacgcctggctaatttttgtatttttagtggagaccgggtttcaccctattgtccaggctagtctcaaactcctgatgtcaggtgatccacccatttcggttcccaaagtgttgagattacaga-cgtgagccatcgggacggacgacacccctacttctttcttcttcttctttttttttttttttttttttttttttgagatggagtctccctttgtagcccaggctggagtacaatggtgcgatctcagctcagctcactgcagtttcctcctcccgggttcaagtgattttcctgcctcagcctccagagtagctgggattacaggcacgtaccaccacactggctaatttttgtatttttagcagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcagaagatccacccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgcaccctacacttt--tactgctttctgtagctcaggcagctaaacgagcttcaatcatctggcccttcctccagtcccacatttttgtgggattcctgtgcatacacaattgaatctggtttttcttctgtcagactgttttgtgtcaatgtaattcacaacccatccaaagaacctaagagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaggagttcaagaccggcccagtgtacaaagtgagacccagtctctagttaaaaaagaGGGGGAGGGagccgggcacagtgtctcacgcctgtaattccagcactttgggaggcccaggtgggtggctcacctgaggtcaggagtccaagaacagcctggccaaggtggtgaaaccccatctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcagcagaatcacttgGTTTGGGATTTTCTCTCTGAGACACTTGCTATCTCCAGGATTATGGGTCTCAGGTgaaagaaagacacagaaggagagagagacagagagagggacaggaaaagagaATTTTAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGCCAAGGTAAAAATGAACACGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgtggtggctcacgcctctaatcccagcactttgggatgccaaggcgggcgaatcatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaagttagctagctgggcacagtggtgcacgcctgtaatcccagctactagggaggctgaggcaggaggatcgcttgaacccgggaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctca------------------aataataataataataataaCCAGTggccaggtgcagtggctcacacctgtaaccccagtgtagcaggacgagccacagac-aaaacctctcagacacagagttgtagaagaaagggcttttattcagctgggagcatcggcaagctactgtcttaaaatccaagttcctcgagtgcacaatttctgtcccttttaagggctcacaacactaaagattgtgcacgaaagggtcgtgattgattgagccatctaggggatacgtaacaggggtttcatgcactggtggtcagagtgaaacagaacagggcagggagtttcacaatgttcttctatacaatgcctggaatctgtggataacatcgggttctaagtcatgagttgatttttatctactaggttgacgccaggcaggcccaggc------------ctggttttgggtctggtgcctggcgccgggctgcctgcctttggtttcacttgcttgcttttttct i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=26207.000000 s hg38.chr19_GL949748v2_alt 939122 298 + 1064304 ttttc--------------------------------tttttttttttttttgagacagagtcttgctctgtcgctaaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcctggattcaagcaattctgctgcctcatccttccgagtagctgggattacaggcgcacgccaccatgcccggctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccgg s panTro4.chr19 59876318 330 + 63644993 ttttctttttctttttttttttctttttctttttctttttttttttctttttgagacagagtcttgctctgtcgcttaggctggagtacagtggcgcaatctcggctcactgcaagctccgcctcctggattcaagcaattctgctgcctcatcctcccgagtagctgggattacaggcgcacgccactatgcccggctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccgg i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56796949 0 + 60714840 C e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=3791.000000 s hg38.chr19_GL949748v2_alt 939420 17 + 1064304 cctccttgttttttttc s panTro4.chr19 59876648 17 + 63644993 cctccttgtttttttct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103312972 17 - 106955855 cttccttgcttttttct i nomLeu3.chr10 I 246 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56796949 0 + 60714840 C e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=32374.000000 s hg38.chr19_GL949748v2_alt 939437 62 + 1064304 taaaacaagtactgagtataaaacaatataaaacaatatgagacggtttctctcttccctca s panTro4.chr19 59876665 62 + 63644993 taaaacaagtactgagtataaaacaatataaaacaatatgagacggtttctctcttccctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56796949 62 + 60714840 taaaacaggtactgagtataaaacaatatagaacaatatgagagggtttctctcttccctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312989 62 - 106955855 taaaacaggtactgagtataaaacagtataaaacaatatgagagggtttctctctttcctca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=72867.000000 s hg38.chr19_GL949748v2_alt 939499 58 + 1064304 ccagcactttgggaggctgaggcaggtggatcacaaggtcagAGTGGAT--------------agcacttta s panTro4.chr19 59876727 58 + 63644993 ccagcactttgggaggctgaggcaggtggatcacgaggtcagAGTGGAT--------------agcactttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797011 72 + 60714840 ccagcacttcgagaggctgaggcgggtggatcacgaggtcagAGTGGATCATGAGGTCAGATcagcactttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313051 55 - 106955855 ccagcacttcaggaggctgaggagggtggatcacaaggtca---tgaTc--------------agcactttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60613695 54 + 64156825 ccagcactttgggaggctgaggcaggcagattatgaggtca----gATc--------------agcacttcc i rheMac3.chr19 I 1441 C 0 s macFas5.chr19 55754240 53 + 59248254 ccagcactttgggaggctgaggcaggcagattacg-ggtca----gATc--------------agcacttcc i macFas5.chr19 I 584 C 0 s papAnu2.chr19 47859126 54 + 51301725 ccagcactttgggaggctgaggcaggcagattacgaggtca----gatC--------------AGCACTTcc i papAnu2.chr19 I 5245 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I a score=327855.000000 s hg38.chr19_GL949748v2_alt 939557 134 + 1064304 ggaggttgaggtgggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagacccccatttccaattttagtgtatgtgctgccaaagcaaatacTCTGAGACCCTGTTTCTACAAAAAA s panTro4.chr19 59876785 134 + 63644993 ggaggttgaggtgggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagacccccatttccaaTTTTAGTGTATGTGCTGCCAAAGCAAGTACTCTGAGACCCTGTTTCTACaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797083 128 + 60714840 ggaggttgaggtgggaggaccccttgagcccaggaactcaagtccagcctgggcaacatagcaagaccccCATTTCCAATTTTA------GTGCTGCCAAAGCAAGTACTGTGAGACCCTGTTTCTACAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313106 134 - 106955855 ggaggttgaggtaggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagaccccCATttccgattttagtgtacgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60613749 134 + 64156825 ggaggttgaagtgggaggatccagtcagcccaggagctcgagtacaacctgggcaacatagcaagaccccCATttccgattttagtatatgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55754293 134 + 59248254 ggaggttgaagtgggaggatcccttgagcccaggagctcaagtccaacctgggcaacatagcaagacccccatttccgattttagtatatgtgctgccaaagcaagtactgtgagaccctgtttctacaaaaaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47859180 134 + 51301725 ggaggttgaagtgggaggatcccttgagcccaggagctcaagtccaacctgggcaacatagcaagacccccatttccgattttagtatatgtgctgccaaagcaagtactgtgagaccctgtttctacaaaaaa i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47568092 134 + 50890351 ggaggttgaagtgggaggatcccttgagcctaggagctcaagtccaacctgggcaacatagcaagaccccCATttccgattttagtgtatgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i chlSab2.chr6 I 1756 I 1 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=21675.000000 s hg38.chr19_GL949748v2_alt 939691 82 + 1064304 TAAAAAAATTAAAATTAGT-GCTTGG----AAAAAAAAATTAGTGCTTGACCAGGAGGCAAGCACACCTCCTCATCCTCTCATGGAT s panTro4.chr19 59876919 82 + 63644993 taaaaaaattaaaa-taGT-GCTTGG---AAAAAAAAAATTAGTGCTTGACCAGGAGGCAAGCACACCTCCTCATCCTCTCATGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797211 86 + 60714840 TGAAAAAATAAAAATGAGT-GCTTGGAAAAAAAAAAAAAAAAGTGCTTGGCCAGGAGGCAAGCACACCTCCTCATCCTCTCACGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313240 84 - 106955855 TAAAAAAATAAAAATTAGT-GCCTGG--AAAAAAAAAAATTAGTGCTTGACCAGGAGGCAGGCACACCTCCTCATCCTCTCATGGAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55754428 19 + 59248254 aaaaaaaaTAAAAATTAGT-------------------------------------------------------------------- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47859315 19 + 51301725 ttaaaaaataaaaattagt-------------------------------------------------------------------- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47568227 20 + 50890351 GTAAAAAATAAAAATTAGTG------------------------------------------------------------------- i chlSab2.chr6 I 1 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e rheMac3.chr19 60613883 10 + 64156825 I a score=118359.000000 s hg38.chr19_GL949748v2_alt 939773 49 + 1064304 GTCTGTCTGTAGAAAGTAAATGGAGACAGCTTCATTTTACCCAACTGCT s panTro4.chr19 59877001 49 + 63644993 GTCTGTCTGTAGAAAGTAAATGGAGACAGCTTCATTTTACCCAACTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797297 49 + 60714840 GTCTGTCTGTAGAAACTAAACGGAGACAACTTCATTTTACCCAACTGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313324 49 - 106955855 GTCTGTCTGTAGAAACTAAATGGAGACAGCTTCATTTTACCCAACTGCT i nomLeu3.chr10 C 0 I 321 s rheMac3.chr19 60613893 49 + 64156825 GTCTGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55754447 47 + 59248254 --CTGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47859334 47 + 51301725 --ctgtCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47568247 46 + 50890351 ---TGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=1641847.000000 s hg38.chr19_GL949748v2_alt 939822 727 + 1064304 CCGTTTTAGGTCCGCTCCTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCGACTCCCGGCTGCAGAG-----------------------CCTTGTCAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTGTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCGATACTCTGTTCTAACCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGTTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTGTTTCTTGTTTTTTTTGtttgtttgtttctttcgttttgttttttgagatgttgtctccctctatcacccaggctggagtgcagtggcgagatctcagctcactgcaacctctgcttcccgggttcaagcaattctcctccctcagcctcctgggtagctgggattacaggtgcctgccgccacacccagctaacttttgtatttttagtagagacgggatttcaccatgttggccaggctagtctcgagctcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattacagccttaagccaccgcgctcaaccAGAAGTCTGTTTAAATCCATCCTTCTCCCCAgccacccatgagttatgtgaccttggggttgctacttaacatttcagtctcaatttcctcaatagaacaaaagttag s panTro4.chr19 59877050 742 + 63644993 CCGTTTTAGGTCCGCTCCTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCAACTCCCGGCTGCAGACTGACAAGGCTGACAAGGCTGACTCCTTGTCAGAAGCAGGCAGTGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCGATACTCTGTTCTGACCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGTTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTGTTTCTTGttttt--------tttgtttcttttgttttgttttttgagatgttgtctccctctatcgcccaggctgcagtgcagtggcaagatctcggctcactgcaacctctgcttcccgggttcaagcaattctcctccctcagcctcctgagtagctgggattacaggcgcctgccgccacacccagctaacttttgtatttttagtagagaccggatttcaccatgttggccaggctggtctcgagctcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattacagccttaaaccactgcgctcaaccAGAAGTCTGTTTAAATCCATTCTTCTCCCCAgccacccaagatttatgtgaccttggggttgctacttaacattacagtctcaatttcctcaATAGAACAAaagttag i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56797346 723 + 60714840 GTGTTTTAGGTCCGCTCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCAACTCCCGGCTGCAGAA-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTTTTCTGGCCATGTAGTTCCTCTTTTAGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTTTTTCTTGGGTTT-TTGtttgtttgtttcttttgttttgttttttgagatgttgtctccctctatcgcccaggctggagtgcagtggcgagatctcggctcactgcaacct---cttcctgggttcaagcaattctcctccctcagcctcctgagtagctgggattacaggcgcccaccgccacacccagctaacttttgtatttttagtagagacgggatttcaccgtgttggccaggctggtctccagctcctgaactcaagtgatccacccatcttggcctcccaaagtgctgagattacaggcttaagccactgcgctcagccAGAAGTCTGTTTAAATCCATCCTTCTCCCCAgccacccatgagttatgtgaccttggggttgctacttaacatttcagtctcaatttcctcaATACAACAAAAGTTAG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103313694 721 - 106955855 cggccCTAGGTCCACTCTTGAGCTTCTGTTGTTCCCAGTCATGCAACCCTGGGAACCGACTCCTGGCTGCAGAG-----------------------CCTTGTCAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCCTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATGTACCCGAACCAAACTCACTAATTCCAACAGAAGTCTGGTTTTTCTTGTTTTT---GtttgtttgtttgttttgttttgttttttgagatgttgtctccctctatcgcccaggctggagtgcagtggcaagatctcgactcactgcaacctctgcttcccaggtgcaagtaattctcctccctcagcctcctgagtaggtgggattacaggcgcccactgccatgcccagctaacttttgtatttttagtagagatgggatttcaccatgtgggccaggctggtctcgagctcctgacctcaagtgatccacccacttcggcctcccaaagtgctgggattacagctgtaagccaccatgctcagccAGAAGTCTGTTTAAATCCGTCCTTCTCCCTAgccacccatgagttatgtgaccttgtggttgctacttaacatttcagtctcaatttcctcaatagaacaaaagc--- i nomLeu3.chr10 I 321 C 0 s rheMac3.chr19 60613942 701 + 64156825 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAAAG-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAGTTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGACCACGTAGTTCCGCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAATTCTGG------------------------GGtttgttttgttttg--tgttgagaccttgtctccctctattgcccgggctggagtgcagtggcgagatctcggcttattgtggcctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgctgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccatgagccaccacgctcagccAGAAGCCTGTTTAAATCCATCCTTCTCCCTAgccacccatgagttatgtgatcttggggttgctacttaccatttcagtctcaatttcctcaAtagaacataagttag i rheMac3.chr19 C 0 I 1276 s macFas5.chr19 55754494 701 + 59248254 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTTCAGAG-----------------------CCTTGTTAGAAGCAGGCAATGCACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTAAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGACCACGTAGTTCCGCTTTTGGATCTCCAAAAGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAAGTCTGG------------------------GGtttgttttgttttg--ttttgagaccttgtctccctctattgcccaggctggagtgcagtggcgagatctcggcttattgtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgctgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccatgagccaccacgctcagccAGAAGCCTGTTTAAATCCATCCTTCTCCCTAgccacccatgagttatgtgatcttggggttgctacttaccatttcagtctcaatttcctcaAtagaacataagttag i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47859381 701 + 51301725 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAGAG-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGcattttgttgaattgtttttGAATTGTGGTTTCTTATCATTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAAGtctgg------------------------ggtttgttttgttttg--ttttgagaccttgtctccctctatcgcccaggctggagtgcagtggcaagatctcggcttaTTGtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgccgccacacccagctaacttttgtatttttactacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccgtgagccactatgctcagccagAAGTCTGTTTAAATCCATCCTTCTCCCTAGCCACCCATGAGTTATGTGATCTTGGGGTTGCTACTTACCATTTCAGTCTCAATTTCCTCAATAGAACATAAGCTAG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47568293 701 + 50890351 GCGTTTTAGGTCTTCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAGAG-----------------------CCTTGTAAGAAGCGGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCGGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGCTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGG------------------------Gttttgttttgttttg--ttttgagaccttgtctccctctgttgcccaggctggagtgcagtggcgagatctcggtttattgtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgccgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctgatcttgagctcctgacctcaagtgatccacccacctcggccccccaaagtgctgggattatagccgtgagccaccacgctcagccAGAAGTCTGTTTAAATCCATCCTTCTCCCTAGCCACCCATGAGTTATGTGATCTTGGGGTTGCTACTTACCATTTCAGTCTCAATTTcctcaatagaacataagttag i chlSab2.chr6 C 0 I 8 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=2360.000000 s hg38.chr19_GL949748v2_alt 940549 7 + 1064304 aagaatt-- s panTro4.chr19 59877793 5 + 63644993 aagaa---- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56798070 5 + 60714840 AAGAA---- i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103314415 5 - 106955855 aagaa---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55755196 7 + 59248254 aagaa--tt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47860083 5 + 51301725 AAGAA---- i papAnu2.chr19 I 1 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47568994 8 + 50890351 I e rheMac3.chr19 60614643 1276 + 64156825 I a score=11813.000000 s hg38.chr19_GL949748v2_alt 940556 17 + 1064304 gtaACAAAAGATAGttt s panTro4.chr19 59877798 15 + 63644993 -taacaaaagatag-tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56798075 16 + 60714840 -TAACAAAAGATAATTT i ponAbe2.chr19 C 0 I 36 s nomLeu3.chr10 103314420 16 - 106955855 -taACAAAAGATAATTT i nomLeu3.chr10 C 0 M 2680 s papAnu2.chr19 47860088 16 + 51301725 -taacaaaagataattt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47568994 8 + 50890351 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=273.000000 s hg38.chr19_GL949748v2_alt 940573 1 + 1064304 t s panTro4.chr19 59877813 1 + 63644993 t i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47860104 1 + 51301725 t i papAnu2.chr19 C 0 I 295 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798091 36 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=-247.000000 s hg38.chr19_GL949748v2_alt 940574 7 + 1064304 attttta s panTro4.chr19 59877814 3 + 63644993 att---- i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798091 36 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=66820.000000 s hg38.chr19_GL949748v2_alt 940581 297 + 1064304 tttttatttttattttttgagatggagtcttgctctgtcacctaggctggagtgcagtggtgtgatggtggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaatttttttaatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcttgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccag s panTro4.chr19 59877817 297 + 63644993 tttttatttttattttttgagatggagtcttgctctgtcacccagactggagtgcagtggtgtgatcttggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaatttttttaatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56798127 298 + 60714840 tttttttcttttttttttaagacagagtctggctctgttgcccaggctggagtgcaatggcgcaatcttggctcaccacaacctccgcctcctgggttggagcaatcctcctgtctcagccttccgagtagctgggattacaggtgtgcaacaccacacccggctaatttttgt-atttttagtagagatggggtttcaccattttggccaggctggtcttgaactcctgacctcaggtgacccacctacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcccag i ponAbe2.chr19 I 36 I 902 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=100.000000 s hg38.chr19_GL949748v2_alt 940878 1 + 1064304 c s panTro4.chr19 59878114 1 + 63644993 c i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=87397.000000 s hg38.chr19_GL949748v2_alt 940879 174 + 1064304 ACaaaagataatttcttaatcccatgcatttgagtcttaaaaaaatattctatataattccaaggtcaaagaagaaataacaaagggcatttttaaaaatgctagaactgagtggtggtgaaattgctgttgaaatgtgtttgttgcactgatggaaatttataaatgtaaata s panTro4.chr19 59878115 174 + 63644993 acaaaagataatttcttaatcccatgcatttgagtcttaaaaaaatattctatataattctaaggtcaaagaagaaataacaaagggcattttttaaaatgctagaactgagtggtggtgaaattgctgttgaaatgtgtttgttgcactgatggaaatttataaatgtaaata i panTro4.chr19 C 0 C 0 s macFas5.chr19 55755203 173 + 59248254 acaaaagataatttcttagtcccatgtgtttgagtcttaaaaaaa-attctatataattcataggtcaaagaagaaataacaaagggtattttttaaaatgttagaactgagtggtggtgaaatagctgttgaaatgtgtgtgttgcactgatagaaacttataaatgtaaata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47569002 173 + 50890351 acaaaagataatttcttagtcccatgtgtttgagtcttaaaaaga-attctatataattcataggtcaaagaagaaataacaaagggtattttttaaaatgttagaactgagtggtggtgaaatggctgttgaaatgtgtgtgttgcactgatggaaacttataaatgtaaata i chlSab2.chr6 I 8 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47860105 295 + 51301725 I e rheMac3.chr19 60614643 1276 + 64156825 I a score=51963.000000 s hg38.chr19_GL949748v2_alt 941053 78 + 1064304 tttatatt-aaaatataaaaTAATGggccaggcatagtggctcacacctgtaatctcagtactttgggaggccaaggcg s panTro4.chr19 59878289 78 + 63644993 tttatatt-aaaatataaaaTAATGggccaggcatagtggctcacacctgtaatctcagtactctgggaggccaaggcg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55755376 77 + 59248254 tttatatt-aaaatataaaa-aaTGggccaggcatagtggttcacacctgtaatctcagtactttgggaggtcaaggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47860400 78 + 51301725 tctattttaaaaagaggggg-agggggccgggcacggtgtctcacgcctataattccatcactttgggacgcccaggtg i papAnu2.chr19 I 295 C 0 s chlSab2.chr6 47569175 77 + 50890351 tttatatt-aaaatataaaa-aaTGggccaggcatagtggttcacacctgtaatctcagtactttgggaggtcaaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=757385.000000 s hg38.chr19_GL949748v2_alt 941131 717 + 1064304 ggagggccat-ggagcccaggagttcaagaccggcccggtgtacaaagtgagacccagtctctagttaaaaaaGAGGGGGAGTGggccaggcacagtgtctcacgcctgtaattccagcactttgggaggccaaagcaggtggatcacccgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtgtc---------tactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctataatccca------------gctagggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacaacagagagacttcatctctaaataaataaataaataaataaaagaaaaTACAAATTTTTT-AAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctcagatcaggagttcaagaagagcctggccagcatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctgaggcaagagaattgcttgagccccggaggcagaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaaca-aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGTCCATA s panTro4.chr19 59878367 709 + 63644993 ggagggccat-ggagcccaggagttcaagaccggcccggtgtacaaagtgagacccagtctctagttaaaaaagaGGGGGAGAGggccggacacagtgtctcacgcctgtaattccagcactttgggaggccaaagcaggtggatcacccgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtgtg---------cactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctgtaatccca------------gctagggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacaacagagagacttcatctc--------taaataaataaataaaggaaaatacaaaTTTTTT-TAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctcagatcaggagttcaagaagagcctggccaacatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctgaggcaagagaattgcttgagccccggaggcagaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaaga-aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGTCCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56799327 719 + 60714840 ggagggccat-gaagcccaggagttcaagacccgcccagtgtacaaagtgagacccagtctctaGTTAACAAAGAGGGGGAGGGggccgggcacggtgtctcacacctgtaattccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtctc---------tactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacaacagagagatttcatctc--------aaaataaataaataaaagaaaatacaaaTTTTTT-TAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcacttcgggaagccgaggcaggtggatctcagatcaggagttcaggaagagcctggccaacatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctga-gcaagagacttgcttgagacctggaagcggaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaac--aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGCCCATA i ponAbe2.chr19 I 902 C 0 s macFas5.chr19 55755453 737 + 59248254 ggagggccat-ggagcccaggagttcaagaccagcccggtgtacaaagggagacccagtctctatttaaaaaaGAGGGGGAGGGggccgggcacggtgtctcacgcctgtaattccatcactttgggacgcccaggtgggtagatcatctgaggtcaggagtccgaga-------------------------------ccagcctg-gccaaggtggtgaaacactgtctc---------tactaaaag----tacaaaattagctt-----ggtatggtggcgggaacctgtaatcccacctgcttggaaggctagggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgtgcaacaacagcgagactctgtctc--------aaaataaataaataaaagaaaaTACATTTTTTTTTAAAAAAGGCACTGTgactgggcatggtggttcacacctgtaatcccagcactttgggaagacgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccgtctctgctaaaaattagcctggcatggtggcaggcgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggcagagattgcagtgagccgagatcgcgccactgcactccagcctgggcaacagagctagactctgtctcaaaaaggaaacaaaaaaaaaaGGTATCTCCAAATTATGGTAGGGTGTCCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47860478 713 + 51301725 ggtggatcatctgaggtcaggagtccgagaccagcctggccaaggtggtgaaaccctgtctctactaaaaataca----aaattagcttggtatggtggcaggagcctgtaatcccagctgcttggaaggctagggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgtgcaacaacagtgagacgctgtctcaaaataaataaataaaagaaaatacaaattttttttaaaaaggcactgTGACgtaaa----------------------------------------------aacccaggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgac-acagcgagactccgtctc--------aaaaaaaaaaaaaaaaa------------------aaaaaaggcactgtgactgggcatggtggttcacacctgtaatcctagcactttgagaagccgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccatctctactaaaaattagcctggcatggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattacttgaacctgggaggcagagattgcagtgagccgagatcacgccactgcactccagcctgggcaacagagcgagactctgtctcaaaaagg------aaaaaaaaggtacCTCCAAATTATGGTAGGGTGTCCATa i papAnu2.chr19 C 0 M 526 s chlSab2.chr6 47569252 733 + 50890351 ggagggccat-ggagcccaggagttcaagaccagcctggtgtacaaacggagacccagtctctatttaaaaaaGAGGGGGCGGGggccgggcacggtgtctcacgcctgtaattccatcactttgggacgcccaggtgggtggatcatctgaggtcaggagtccgaga-------------------------------ccagcctg-gccaaggtggtgaaacactgtctc---------tactaaaag----tacaaaattagctt-----ggtatggtggcgggagcctgtaatcccacctgcttggaaggctagggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctatgcaacaacagtgagactctgtctc--------aaaataaataaataaaagaaaatacaaaaTTTTTTTTAAAAGGCATTGTgactgggcatggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccgtctctgctaaaaattagcctggcatggtggcaggcacctgtaatcccagctacccaggaggctgaggccggagaattgcttgaacccaggaggcagagattgcagtgagccgagatcacgccactgcactccagcctgggcaacagagctagactctgtctcaaaaagg----aaaaaaaaaaGGTATCTCCAAATTATGGTAGGGTGTCCATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=258713.000000 s hg38.chr19_GL949748v2_alt 941848 301 + 1064304 TTAAGAAGGTAGAAAAAggtcgggggaagtgg---atgcctgtaatcccagaactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctggccaaaagggtatggtgaaaccccatctctactagaactacaaaattagccgggcgtggtggtacatgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctgggcgacaagagcaaaactccatctc s panTro4.chr19 59879076 304 + 63644993 TTAAGAAGGTAGAAAACGGTGGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctggccaacagggtatggtgaaaccccgtctctactagaactacaaaattagccaggcgtggtggtacctgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagtgagctgagatcgcaccattgcactccagcctgggcgacaagagcaaaactccatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800046 304 + 60714840 TTAAGAAGATAGAAAAAAGTGGGGGGAAgtggctcgtgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctgaccaacagggtatggtgaaaccccgtctctactagaactacaaaattagccgggcatggtggtgcatgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagcgagctgagatcgcaccattgcactccagcctgggcgacaagagcaaaactccgtctc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55756190 304 + 59248254 TTAAGAAGGTAGAAAAAGGTGGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcaggagttcaagaacagcctggccaacacggtatggtgaaaccccgtctctaataaaaatacaaaatttgccggctgtggtggtgtctgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaagaacctggcaggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggtgacaagagcgaaactccatctc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47569985 304 + 50890351 TTAAGAAGGTAGAAAAAGGTAGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcaggagttcaagaacagcgtggccaatacggtatggtgaaaccctgtctctactaaaaatacaaaattagccggctgtggtgatgcctgcctgtaatcccagctacacaggagtctgaggcaggagaattacaagaacctggcaggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggtgacaggagcgaaactccatctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=8945.000000 s hg38.chr19_GL949748v2_alt 942149 7 + 1064304 aaaaaaa s panTro4.chr19 59879380 7 + 63644993 aaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800350 7 + 60714840 aaaaaag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55756494 7 + 59248254 aaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570289 7 + 50890351 aaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922015 7 + 49145316 aaaaaaa i calJac3.chr22 I 7610 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=61855.000000 s hg38.chr19_GL949748v2_alt 942156 53 + 1064304 -------------aaaaaaa----gaaaaaatgaaaaagaATTTATTGAAATGTGCAGTCTGAAAACTGC s panTro4.chr19 59879387 57 + 63644993 -------------aaaaaaaaaatgaaaaaatgaaaaAGAATTTATTGAAATGTGCAGTCTGAAAACTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800357 52 + 60714840 -------------aaaaaa-----gaaaaaaagaaaaagaaTTTATTGAAATGTGCAGTCTGAAAACTGC i ponAbe2.chr19 C 0 M 882 s rheMac3.chr19 60615919 51 + 64156825 -------------AAAAAAA----AAAAAAAAGAAAAATAATTCACTGAAATGTG--GTCTGAAAACTGC i rheMac3.chr19 I 1276 C 0 s macFas5.chr19 55756501 44 + 59248254 ------------------------aaaaaaaagaaaaataaTTCACTGAAATGTG--GTCTGAAAACTGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570296 44 + 50890351 ------------------------aaaaaaaagaaaaataaTTCACTGAAATGTG--GTCTGAAAACTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922022 66 + 49145316 agaagaagaaggagaagaag----aaaaagaacgaaaagaaTTTATTGAAATGTGCAGCCTAAAAACTGC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=7255.000000 s hg38.chr19_GL949748v2_alt 942209 7 + 1064304 TCCT-GCA s panTro4.chr19 59879444 7 + 63644993 TCCT-GCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60615970 8 + 64156825 TCCTGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55756545 8 + 59248254 TCCTGGCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570340 8 + 50890351 TCCTGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922088 8 + 49145316 TCCTGGCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=44024.000000 s hg38.chr19_GL949748v2_alt 942216 54 + 1064304 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCA---Atttttttttttttttt s panTro4.chr19 59879451 57 + 63644993 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCAtttttttttttttttttttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60615978 54 + 64156825 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCA---Ctttttttttttttttt i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55756553 54 + 59248254 CATTTtcattcatccttcctattccctccatccctca---ctttttttttttttttt i macFas5.chr19 C 0 I 5 s chlSab2.chr6 47570348 53 + 50890351 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTTC---Cttttttttttttttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=3135.000000 s hg38.chr19_GL949748v2_alt 942270 10 + 1064304 gagacagagt s panTro4.chr19 59879508 10 + 63644993 tagacagagt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55756612 10 + 59248254 gagacagagt i macFas5.chr19 I 5 C 0 s chlSab2.chr6 47570401 8 + 50890351 gagac--agt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=41653.000000 s hg38.chr19_GL949748v2_alt 942280 49 + 1064304 ttcgctcttgttgcccaggctggagtgcaatggcacgatctcagctcac s panTro4.chr19 59879518 49 + 63644993 ttcgctcttgttgcccaggctggagtgcaatggcacgatctcagctcac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317190 49 - 106955855 Ttcgctcttgttgcccaggctggagtataatggcgtgatctcagctcac i nomLeu3.chr10 M 2680 C 0 s macFas5.chr19 55756622 49 + 59248254 tttgctcttgttgtccaggctggaatgcaatggcgcaatctcagctcac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570409 49 + 50890351 tttgctcttgttgtccaggctggaatgcaatggcgcaatctcagctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=107846.000000 s hg38.chr19_GL949748v2_alt 942329 229 + 1064304 tgcaacctctgcctcccaggttccagccattttcctgcctcagcctccagaatagctggaattacaggcatctgccactacgcctggctaattttttgtgtatttttagtagagatgggatttcaccatgttggtcaggctgatctcgaact-cctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaatcaccacgcccggccCC s panTro4.chr19 59879567 229 + 63644993 tgcaacctctgcctcccaggttccagcgattttcctgcctcagcctccagaatagctggaattacaggtatctgccactacgcctggctaattttttgtgtatttttagtagagatggggtttcaccatgttggtcaggctgatctcgaact-cctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaaccaccacgcccggccCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317239 214 - 106955855 tgcaacctctgcctcccaggttcaagcgattttcctgcctcagcctccagaatagctggaattacaggcacctgccactacgcctagctaattttttgtgtatttttagtagagatgg-------tcat--------ggctggtctccaact-cccgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggtatgaaccaccacacctggccCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55756671 230 + 59248254 ggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggcacctgccaccacgtccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgcccgacctcaggtgatccacatgcctcggcttcccaatgtgctgggattacaggagtgaaccaccacacctggcccc i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=273.000000 s hg38.chr19_GL949748v2_alt 942558 1 + 1064304 T s panTro4.chr19 59879796 1 + 63644993 T i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317453 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C e rheMac3.chr19 60616032 8 + 64156825 I a score=13278.000000 s hg38.chr19_GL949748v2_alt 942559 40 + 1064304 CATTTTCTTTTCTTtctttctttcttt-tttgtttgtttgt s panTro4.chr19 59879797 40 + 63644993 CACTTTCTTTTTATtctttctttcttt-tttgtttgtttgt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317454 39 - 106955855 CACTTTCTTTTT-TTCtttctttcttt-cttttttgtttgt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45922096 40 + 49145316 CATTTTCTTTCC-ttatttatttatttatttatttatttat i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C e rheMac3.chr19 60616032 8 + 64156825 I a score=16933.000000 s hg38.chr19_GL949748v2_alt 942599 30 + 1064304 ttttgagacagagtcttgctc-tgtcaccca s panTro4.chr19 59879837 30 + 63644993 ttttgagacagagtcttgctc-tgtcaccca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317493 30 - 106955855 ttttgagacggagtctcgttc-tgtcgccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616040 31 + 64156825 ttttgagacagagttttgctcttgttgtcca i rheMac3.chr19 I 8 C 0 s calJac3.chr22 45922136 28 + 49145316 ttttgagatggagtctccctc-tgtcaga-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C a score=16576.000000 s hg38.chr19_GL949748v2_alt 942629 14 + 1064304 ggctggagtgcagt s panTro4.chr19 59879867 14 + 63644993 ggctggagtgcagt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317523 14 - 106955855 ggctggagggcagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616071 14 + 64156825 ggctggaatgcaat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861717 14 + 51301725 ggctggaatgcaat i papAnu2.chr19 M 526 C 0 s calJac3.chr22 45922164 14 + 49145316 ggctggagtgcagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e macFas5.chr19 55756901 0 + 59248254 C a score=138265.000000 s hg38.chr19_GL949748v2_alt 942643 87 + 1064304 ggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggc s panTro4.chr19 59879881 87 + 63644993 ggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctaggactacaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317537 87 - 106955855 ggtgacatctcggctcactgcaagctccacctcccgggttcatgccatcctcctgcctcagcctcctgagtagctgggactacaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616085 87 + 64156825 ggcgcaatctcagctcacggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861731 87 + 51301725 ggcgcaatctcagctcacggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570458 87 + 50890351 ggcgcaatctcagctcacagcaacctctgcctcccaggttcaagcgattttcctgcttcagcctccagaatagctggaattacaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922178 87 + 49145316 ggcgagatctcggctcaccacaacctcctcctcctggattcaagcgattctcctgcctcagcctcccaagtagctgggattacaggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e macFas5.chr19 55756901 0 + 59248254 C a score=159098.000000 s hg38.chr19_GL949748v2_alt 942730 157 + 1064304 gcccgccaccacgcccggctaa--ttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctccatct-cctgacctc--gtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgaggcaccacactgggc------------------------------------cCCC s nomLeu3.chr10 103317624 156 - 106955855 gcccgccaccacgcccggctaa--ttttttgtatttttagtagagacggggtttcaccgtgtcagccaggatggtctcgatct-cctgacctc--gtgatccgcccgcctcggcctcccaaagtgctgggattccaggcgtgagccaccgcgccgggc------------------------------------cCC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616172 161 + 64156825 acctgccaccacgcccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgccagacctcaggtgatccacctgcctcggcttcccaatgtgctgggattacaggagtgaaccaccacacctggc------------------------------------cCC- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861818 161 + 51301725 acctgccaccacgcccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaagctggtctcaaactgcccgacctcaggtgatccacctgcctaggcttcccaatgtgctgggattacaggcgtgaaccaccacacctggc------------------------------------ccc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570545 161 + 50890351 acctgccaccacgcccagtcaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgcccgacctcaggtgatccacctgcctcggcttcccaatgtgctgggattacaggcatgaaccaccacacctggc------------------------------------cCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922265 193 + 49145316 acacaccaccatgcccagctaat-ttttttgtatttttagtagagacagggtttcatcatgttggccaggatggtctcaatct-cttgacctt--gtgatccaccctcctcggcctcccaaagcgctgggattacaggcgtaaaccaccgcgcccggccTGGCAGATTTCATTCATCCTTTCTCTTCCCTCCATCCC- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e macFas5.chr19 55756901 0 + 59248254 C e panTro4.chr19 59879968 0 + 63644993 C a score=1161886.000000 s hg38.chr19_GL949748v2_alt 942887 717 + 1064304 TCACTTTCTTATTCTTTCTAGGATAGGCAACTGA-GCGCGGCAGTGAAGAGCTGGGCTTCCGGAAGCTGACAGCTGTTTGTGATCTTCAAgacctcagacaggttttctaaatatgccttgccttcattttctcaaggaaagtgaaaaatgggtaggatcatggcaatcactactgtgtagcaat-gtttagaggacttaataagtaaacacaGggtcaagcatggtggctcacaccggaaatcccagcactttggga-ggccgt---ggtgggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacctccatctctataaaa-aatacaaaaatctagtcaggcgtgatggcg-tatgcctgtagccttcagtaagctatgattgtgccactgcacaccagcctaggcgacagagtgagaccctgtctcaaaaagaa------aaaacgaaaagaaaTATAGATGTACATATACATATGTTGGTTCTAAAACATGAAAAAggctgggcgcggtggttcgtgcctgcaacccaagcactttgggaggccgaggcgggcggatcacgaggtcaagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaatac------------------aaaaaAAAggctaggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgagcagattacctgaggttgggag s nomLeu3.chr10 103317780 733 - 106955855 TCACTTTCTTATTCTTTTTAGGATAGGCAACTGAAGCACAGCAGTGAAGAGATGGGCTTCCGGAAGCTGACAGCTGTTTGTGATCTTCAAGACCTCCGGCAGGTTTTAAAAATATGCCTTGCCTTCATTTTTTCAAGGAAAGTGAAAAAAGGGTAGGATCATGTCAATCGCTACTGTTTGGCAACAGTTTGGAGGAAGTAATAAGTAAATACAGggtcaagcatggtggctctcagtggaaaccccagcactttgggagggccgt---ggtgggaaggatgcttaagcccaaggggtagagaccagaatgggcaacatagtgagagccccgtctctataaaa-aacacaaaaatatagtcaggcgtgatggcg-tatgcctgtagcagtcagtgagctatgattatgccactgcacaccagcctaggcgacagagtgagaccctgtctcaaaaagaa------aaaacgaaaagaaaTATACATGTACATATACATATATTGGTTCTAAAACATGAAAAAggccgggcgtggtagctcatgcctgcaacccaagcacttcgggagtccgaggcggacggatcacgaggtctgaagtttgagaccaccctggccaacatagtgaaactccgtctctactaaaaatac-----aaaaaAAAAAAAAAAAAAAAAggctaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggtgagcggattacctgaggttgggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616333 732 + 64156825 TCACTTCCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATACCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAACACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGGAAAAggccgggcacggtggctcctgcctgcaatccaaacacttcgggaggccgaggcgggcagatcactaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatac-------aaaaaaATAAAAATAAAAAggctaggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtagattacctgaggttgggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55756901 732 + 59248254 tcacttccttattcttcCTAGGATAGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATACCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAACACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGGAAAAggccgggcgcggtggctcctgcctgcaatccaaacacttcgggaggccgaggcgggcagatcactaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatac-------aaaaaAATAAAAATAAAAAggctaggcacagtagctcatgcctgtaatcctagcactttgggaggccgaggtgggtagattacctgaggttgggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47861979 735 + 51301725 tcacTTCCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGACCTCAGgcaggttttctaaatataccttGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAATACAgggtcaagcatggtggctcacactggaaatcccagcacttcggaa-ggccat---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaAGACATGATGCCA-TATGCCTGTAgccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaa----aaaaaggaaagaaatatagatgtacatatacatataccagTTCTAAAACATggaaaaggctgggcgcggtggcttctGCCTGCAATCcaaacacttcgggaggctgaggcgggcagatcacgaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatacaaaaaaaaaaaaaaaaaaaaaaaaaaggctaggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggcagattacctgaggttgggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570706 731 + 50890351 TCACTTTCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGTAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATAGCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAGGGTCATGGCAATCACTACTGTGTAGCGAA-GTTTAGAGGACCTAATAAGTAAATACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGAAAAAggccgggcgcggtggctcctgcctgcaatccaaacacttcgggaggctgaggcgggcggatcacgaggtcaggagtttgagaccagcccggccaacatagtgaaacctcgtctctacaaaaaatac--------aaaaaatAAAAATAAAAAggctaggcacagtggctcatgcctgtaatcctagcactttgggaagccgaggtgggcagattacctgaggttgggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922458 714 + 49145316 TCACTTTCTGACTCTTTCTAGAAT-----------------------AGAGCTGGGCTTCC-GAAGCTCACAGCTGTTTGTGATCTTCAAGACCTCAGACAGGTTTTCTAAATATTTCTTCCCTTCATTTTCTCAAGGAACGTGAAAAGTGGGTAGGATCCTGGCAATCCCTGCTGTGGAGGAAA-GCTTAGAGGACCCAGTAAGTCAATAGAGggtcaagcatggtggctcatggctgaaatcccagcactctggga-ggccatggcggcgggaagatcgcttaagcccatgaggttgagaccagcctgggcaacatcgtgagatcaccatctctacaaaacaatatccaaatctagtcaggcatgagggcattatgcctgtagcctgcagtgagctatgattgtgccactgcactccagccagggcgacagagtgagaccctgactcaaaaagaa-acaacaaaaagaAAAGAAATACAGATGTAGACAGACATATGTTGGTTCTAAAGCATGAAAAAggctgggcacggtggctcacgcctgtaatcccagcactctgggagtccaatgccggcacatcaagaggtcaggagtttgagaccagcttggccaacatagtgaaaccctatctctactaaaaatac--------aaaaaaaaacaaaaaactagccgggtgtgctggcgggcgtctgtagtcccagctacttgggaggtggaggcaggaaaatcacttgaacccaggag i calJac3.chr22 C 0 I 1621 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e panTro4.chr19 59879968 0 + 63644993 C a score=97417.000000 s hg38.chr19_GL949748v2_alt 943604 83 + 1064304 ttcaagaccaccctgtcc-aacatggtgaaaccccatctctactaaaaata-agaaaattagccgggtacagtggcacgcgcctg s nomLeu3.chr10 103318513 84 - 106955855 ttcaagaccagcctggcc-aacacggtgaaaccccatctctactaaaaatacaaaaaattagccgggtacagtggcacgcacctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617065 84 + 64156825 ttcaagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgcagtggcacacgcctg i rheMac3.chr19 C 0 M 676 s macFas5.chr19 55757633 84 + 59248254 ttcaagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgcagtggcacacgcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862714 84 + 51301725 ttcaaaaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgccgtcacacgcgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571437 84 + 50890351 ttccagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagcccggtgcagtggcacgtgcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e panTro4.chr19 59879968 0 + 63644993 C a score=120684.000000 s hg38.chr19_GL949748v2_alt 943687 184 + 1064304 taatcccagctattcaggaggctgaggcaggagaatcgcttgaactctggaggcggaggttgcagtgagccaagattgcgccactgcactccagcccgggcgacagtgccagactcagtctcagaaaaaaaaaaagc----------------------------------------------------------------------------------------aaaacaaaca-------aagaaACATGAAAAAAAGCTATAAAACCCAACttttt s nomLeu3.chr10 103318597 176 - 106955855 taatcccagctcttcaggaggctgaggcaggagaatcgcttgaactctggaggcagaggttgcagtgaactgagatcgcgccactgcactacagcccgggcgacagtgcaagaatcagtctc---aaaaaaaaaagc----------------------------------------------------------------------------------------aaaacaaac------------aacatgaaaaaaaGCTATAAAACCCAACTTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757717 269 + 59248254 taatcccagctactcaggaggctgaggcaggagaatcgcttgaactctagaggaggaggttgcagtgagccgagatggtgccactgcactccagcccaggcgacagtg--agactctgtctccaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCaaaacaaaa--------aaaaaacatgaaaaaaagcaataaaaCTCAACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862798 189 + 51301725 taatcccagctactcaggaggctgaggcaggagaatcgcttaaactctggaggaggaggttgcagtgagccgagatggtgccactgcactccagccccggcgacagtg--agactcagtctcaaaaaaaaaaaaaaa----------------------------------------------------------------------------------------aaaaaaaaaagcaaaacaaaaaaaatgaaaaaaagctataaaactcAACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571521 178 + 50890351 taatcccagctactcaggaggctgaggcaggagaatcgcttgaactctgaaggaggaggttgcagtgagctgagatggtgccactgcactccagcccgggcgacagtg--agactctgtctccaaaaaaacaaagc-----------------------------------------------------------------------------------------aaaacaa----------aaaaaaCATGAAAAAAAGCTATAAAATTCAACTTTTT i chlSab2.chr6 C 0 I 9 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=2670.000000 s hg38.chr19_GL949748v2_alt 943871 9 + 1064304 tcttttttt s nomLeu3.chr10 103318773 9 - 106955855 AGTCTTATT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757986 9 + 59248254 AGTCTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862987 9 + 51301725 AGTCTTATT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e chlSab2.chr6 47571699 9 + 50890351 I e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=91.000000 s hg38.chr19_GL949748v2_alt 943880 1 + 1064304 t s papAnu2.chr19 47862996 1 + 51301725 T i papAnu2.chr19 C 0 I 300 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 943881 466 + 1064304 tttgagacggagtctcactctgtcgcccagggtggagtgcagtggtgcggtctcggctcactgcaacctccgcctcctgggttcaagcaattctctgcttcagcctcccaagtagctgggattacaggcacccgccaccacgcccgactaattttttgtatttttagttgagacggggtttcatcatcttggccaggctggtcttgaagtcctgacctcgtgatccacccgccttggcctcccaaagtgctggaattacaggcgtgagccaccgcgcccggccAAAACCCAACTTTTTAGTCTTATTTATATGGTGtttttttttttttttttttttttgagatggagccttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggt e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e papAnu2.chr19 47862997 300 + 51301725 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=13576.000000 s hg38.chr19_GL949748v2_alt 944347 153 + 1064304 gcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggc s panTro4.chr19 59879968 153 + 63644993 gcccaccaccatgccaggcaaattttttgtatttttagtagagacggggtttcaccgtgttagccaggattgtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e papAnu2.chr19 47862997 300 + 51301725 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M a score=24200.000000 s hg38.chr19_GL949748v2_alt 944500 26 + 1064304 TATATGTTTACAAAATTAATACTGCC s panTro4.chr19 59880121 26 + 63644993 TATATGTTTACAAAATTAATACTGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318782 26 - 106955855 TATATGTTTACAAAATTAATACTGCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757995 26 + 59248254 TATATGTTTACAAAATTAATACTGCC i macFas5.chr19 C 0 I 278 s chlSab2.chr6 47571708 26 + 50890351 TATATGTTTACAAAATTAATACTGCC i chlSab2.chr6 I 9 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e papAnu2.chr19 47862997 300 + 51301725 I e rheMac3.chr19 60617149 676 + 64156825 M a score=2865.000000 s hg38.chr19_GL949748v2_alt 944526 2 + 1064304 Ag s panTro4.chr19 59880147 2 + 63644993 Ag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318808 2 - 106955855 Ag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758299 2 + 59248254 ag i macFas5.chr19 I 278 C 0 s papAnu2.chr19 47863297 2 + 51301725 ag i papAnu2.chr19 I 300 C 0 s chlSab2.chr6 47571734 2 + 50890351 Ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e rheMac3.chr19 60617149 676 + 64156825 M a score=45357.000000 s hg38.chr19_GL949748v2_alt 944528 33 + 1064304 ccaggcacggtggctcacgcctgtaatcccagc s panTro4.chr19 59880149 33 + 63644993 ccaggcacggtggctcacgcctgtaatcccagc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318810 33 - 106955855 ccaggcacggtggctcacgcctgtaatcccagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758301 32 + 59248254 ccgggtgtggtggggg-cgcctgtggtcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863299 32 + 51301725 ccgggcctggtggggc-cgcctgtagtcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571736 33 + 50890351 ccaggcacggtgggtcacacctgtaatcccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45924793 33 + 49145316 ctgggcatggtggctcaagcctgtaatcccagc i calJac3.chr22 I 1621 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e rheMac3.chr19 60617149 676 + 64156825 M a score=118763.000000 s hg38.chr19_GL949748v2_alt 944561 83 + 1064304 actttaggaggctgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta s panTro4.chr19 59880182 83 + 63644993 actttaggagggtgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801291 83 + 60714840 actttaggaggctgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i ponAbe2.chr19 M 882 C 0 s nomLeu3.chr10 103318843 83 - 106955855 actttaggaggctgaggctggcggatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758333 119 + 59248254 tactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactccgtttaaaaaaaa i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47863331 114 + 51301725 tactggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactctgttt-----aaa i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47571769 83 + 50890351 actttaagaggctgagactggtggatcacctgaggtcaggagtttgagat-------------------------------cagcctgggcagcatggcaaaactccgtct-----cta i chlSab2.chr6 C 0 I 306 s calJac3.chr22 45924826 81 + 49145316 actttgggaggccgaagtaggtggatca--tgaggtcaggagtttgagac-------------------------------cagcctgaccaagatggtgaaaccctgtct-----cta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60617149 676 + 64156825 M a score=-2136.000000 s hg38.chr19_GL949748v2_alt 944644 4 + 1064304 tt----ga s panTro4.chr19 59880265 4 + 63644993 ct----ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801374 4 + 60714840 ct----ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103318926 8 - 106955855 ctaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758455 4 + 59248254 ----aaaa i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47863448 4 + 51301725 ----aaaa i papAnu2.chr19 I 3 C 0 s calJac3.chr22 45924907 4 + 49145316 ct----ga i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47571852 306 + 50890351 I e rheMac3.chr19 60617149 676 + 64156825 M a score=227109.000000 s hg38.chr19_GL949748v2_alt 944648 107 + 1064304 aaaaaatacaaaaattaaccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcacttgaagccggcaggcggaggctgcggg s panTro4.chr19 59880269 107 + 63644993 aaaaaatacaaaaattagccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcgcttgaagccggcaggcggaggctgcggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801378 107 + 60714840 aaaaaatacaaaaattagccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcgcttgaacccggcaggcggaggctgcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103318934 107 - 106955855 aaaaaatgcaaaaatcagccaggcgttgtggcgcatgcttgtaatcccaaatactc--aggaggctgaggcaggagaatcgcttgaacccggcaggcggaggctgcggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758459 107 + 59248254 aaaaaattgaaaaattagccaggcgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccaggaggcggaggctgcaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863452 107 + 51301725 aaaaaattcaaaaattagccaggcgttgcggcgcatgcctgcaatcccaggtactc--gggtggctgaggcaggagaatcgctcgaacccgggaggcggaggctgcaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572158 107 + 50890351 aaaaaattcaaaaattagccaggtgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccgggaggcggaggctgcaag i chlSab2.chr6 I 306 C 0 s calJac3.chr22 45924911 106 + 49145316 ---aaatacaaaaattagcgaggtgtggtggcaggcgcctgtaatcccagatactcaggggaggctcaggcaggagaatcatttgaacccaagaggcggagattgcagt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60617149 676 + 64156825 M a score=159877.000000 s hg38.chr19_GL949748v2_alt 944755 62 + 1064304 gagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaataa s panTro4.chr19 59880376 62 + 63644993 gagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801485 62 + 60714840 gagccaagatcgtgccattgcactccagcctggggaac-agagcaagactcca--ctaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319041 62 - 106955855 gagccgagatcctgccattgcattccagcctgggcaac-agagcaagactcca--ctaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617825 62 + 64156825 gagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa i rheMac3.chr19 M 676 C 0 s macFas5.chr19 55758566 62 + 59248254 gagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863559 62 + 51301725 gagccgagatcacgccattgcactccaacctgggcaac-taaacaagactcca--ttaaaaataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572265 62 + 50890351 cagccgagatcacgccattgcactccagcctggacaac-taaacaagactcca--ttaaaaataa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925017 65 + 49145316 gagctgaaattgtgccattgcagtccagcttgggcaacaagagtgaaactctgtctcaaaaatta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I a score=-5763.000000 s hg38.chr19_GL949748v2_alt 944817 3 + 1064304 aa----t s panTro4.chr19 59880438 2 + 63644993 aa----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801547 7 + 60714840 aaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319103 7 - 106955855 aaaaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47863621 1 + 51301725 ------t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572327 1 + 50890351 ------t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925082 6 + 49145316 -attatt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e macFas5.chr19 55758628 0 + 59248254 C e rheMac3.chr19 60617887 0 + 64156825 C a score=-4658.000000 s hg38.chr19_GL949748v2_alt 944820 5 + 1064304 --aataa s panTro4.chr19 59880440 3 + 63644993 --aaT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801554 3 + 60714840 --aaT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319110 5 - 106955855 --aaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47863622 2 + 51301725 --aa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572328 2 + 50890351 --aa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925088 2 + 49145316 --aa--- i calJac3.chr22 C 0 I 13 s canFam3.chr1 20035636 5 - 122678785 aaaat-- i canFam3.chr1 I 23589 C 0 e macFas5.chr19 55758628 0 + 59248254 C e rheMac3.chr19 60617887 0 + 64156825 C a score=979316.000000 s hg38.chr19_GL949748v2_alt 944825 313 + 1064304 taaTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacaattatctgggactctcgaaagaactccagggtctgggcagtcccagtgtaaccaatcaagcagaatctctaggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaaga s panTro4.chr19 59880443 313 + 63644993 TAATACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacaattatctgggactctcgaaagaactccagggtctgggcagccccagtgtaaccaatcaagcagaatctctgggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801557 313 + 60714840 TAGTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATATCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcagcggcaatcacaattatctggggctctcgaaagaactccagggtctgggcagcgccagtctgaccaatcaagcagaatctctgggcgtTCGTGCTTTGAAATGAGGCTCCAGATAGGTAAGTTTAACAGGCAGCCAAGA i ponAbe2.chr19 C 0 I 1096 s nomLeu3.chr10 103319115 313 - 106955855 aaaTACTGTGAGTGTAAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATA-GTTGACGTGTCATTGATACTTCACTTGAAGTACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAACCAATCACAGCTGAGGTTTCTAAGcggtgattttcagcctcggcggcaatcacaattatctgggactctctaaagaactccagggtctgggccgccccagtctgaccaatcaagcagaatctctgggcgtttgtgctttgaaatgaggctccagataggtaagtttaacaggcagctaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617887 304 + 64156825 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaatgaggccccagatgggtaagtttaacaggcagcctaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758628 304 + 59248254 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaacgaggccccagatgggtaagtttaacaggcagcctaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863624 307 + 51301725 taatactgtgaGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATATTTCACTTGAAATGCGGTtggatttttattaataatatacttGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATTCTCA------GCGGCAATCACAATTATCTGGGACTCTTTAAAGAACTCCAGGGTCTGGGCAGCTGCAGTTTAACTCATCAACCAGCATCTCTGGGCGTTCGTGCTTTGAAATGAGGCCCCAGATGGGTAAGTTTAACAGGCAGCCTAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572330 307 + 50890351 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACATGTCATTGATATTTCACTTGAAATGCGGTTGGATTGTTATTAATAATATACTTAGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGcagtgattctca------gcggcaatcacaattatctgtgactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccggcatctctgggcgttcgtgctttgaaatgaggccccagatgggtgagtttaacaggcagcctaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925103 306 + 49145316 taatACCGCCAGTGTAAAACTGATGAATTTGGTGCTTTTCATGTGTCCCATA-GTTGACGTGTCATTGATACTTAACTGGAAATGCAGTTGGATTTTTATTAAGAATATGCCTCGTGTGGT-GGAGAAGGGAGCCAGTCGCAGCTGAGGCTTCTAAGcggtgattctcagacca-tcagcaatcgtaattatctgggactc----aagaactccagtatctgagcggcccgaatctgaccaatcaaccagaatctctgggtgtttgtactttaaaatgaggccccagataggtaagttt-acaggcagccaagg i calJac3.chr22 I 13 C 0 s canFam3.chr1 20035641 303 - 122678785 taatattgtcagtataaaactggtgaacttg--gctattgatgtatcttttgtatttacatgtcacttacatttaacatgaaatgttggtggacttttag---------atctggtatgaCAGAAGGGGGTGGCTATTCACAGCTGAACTTCCTGAGcagtgattctcaagattggctgcaattaaaatcatctggagatctttaaaaaacttcagtgactgggcagcccccatctgattaacaaatcagaatatctgggaaccgacactttcaaatgatgccccagggaggtgggttctacatgtggacaagg i canFam3.chr1 C 0 C 0 a score=99099.000000 s hg38.chr19_GL949748v2_alt 945138 57 + 1064304 tggaggaccacAGGT---GGAGATCGGGAAGCTCA-GGTGAAGGACCG-CCCCCCAACACCC s panTro4.chr19 59880756 57 + 63644993 tggaggaccacAGGT---GGAGATCGGGAAGCTCA-GGTGAAGAACCG-CCCCCCAACACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56802966 57 + 60714840 ttgagaaccacAGGT---GGAGATGGGGAAGCTCA-GGTGAGGAATCG-CCGCCCACCACCC i ponAbe2.chr19 I 1096 C 0 s nomLeu3.chr10 103319428 58 - 106955855 ctgagaaccacAGGT---GGAGATCGGGAAGGTCA-GGTGAGGAATCGCCCCCCCACCACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618191 47 + 64156825 ttgagaaccacAGGT---GCAGAACCGGAAGCTCA-GGTCAGGCATTG----------A-CC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758932 47 + 59248254 ttgagaaccacAGGT---GCAGAACCGGAAGCTCA-GGTCAGGCATTG----------A-CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863931 48 + 51301725 TTGGGAACCACAGGT---GCAGATCCGGAAGCTCA-GGTCAGGCATTG----------Accc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572637 47 + 50890351 ttgggaaccacAGGT---GCAGATCCGGAAGCTCA-GGTCAGGCATTG----------A-CC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925409 50 + 49145316 ttgagaaccacAGGT---GTAGATGGGGAAGCTCA-GGTGAGGAGTCA--------GCACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20035944 51 - 122678785 ttaagaacctctgGTCTAGGAGAAGGTGAGGCTCACACTAAGGAAATG----------GTC- i canFam3.chr1 C 0 C 0 a score=14825.000000 s hg38.chr19_GL949748v2_alt 945195 14 + 1064304 CCCGCCCCCAAAAG s panTro4.chr19 59880813 14 + 63644993 CCCGCCCCCAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803023 14 + 60714840 CCCGCCCCCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319486 14 - 106955855 CCCGTCCCCAAACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618238 11 + 64156825 CCCGCCCCC---CG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758979 11 + 59248254 CCCGCCCCC---CG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863979 11 + 51301725 cccgccccc---cG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572684 11 + 50890351 CCCGCCCCC---CG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20035995 3 - 122678785 ----TCC------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45925459 0 + 49145316 C a score=635579.000000 s hg38.chr19_GL949748v2_alt 945209 227 + 1064304 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAGAAAGAAGCC---TTAATAGA-GCTTTCTCAACCTGCAGCCCTCATCTCCGCCGGCGAGTAGGGCCAGGTGTTGG-GAGGTGAGTAGCTCTCCGGCAGCTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAATTTCTCCt--- s panTro4.chr19 59880827 227 + 63644993 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAAAGAGAAGCC---TTATTAGA-GCTTTCTCAACCTGCAGCCCTCATCGCCGCCGGAGAGTAGGGCCAGTTGTTGA-GAGGTGAGTAGCTCTCCGGCAACTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAATttctcct--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803037 227 + 60714840 ACCTCTCAGTAGTTCCGGTGGATACAGGAAGTGCTCAGCAAGGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAAAGAGAAGCC---TTATTAGA-GCTTTCTCCACCTACAGCCCCCATCGCCGCCGGAGAGTAGGGCCAGGTGTTGG-GTGGTGAGTAGCTCTCCGGCAAGTCTGCAACTGCATTTGTTTATTTCTCCATTCCATAGT---------------T--------GGTAAAATTTCTCCt--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319500 227 - 106955855 ACCCCCCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAGCGATTACGCCCCGTGGGCCAATCACAGGGC-TGCGGCCGAACGAGAAGCC---TTATTAGA-GCTTTCTCAACCTACAGCCCTCACCGCCGCCGGAGAGTAGGGCCAGGTGCTGG-GAGGTGAGTGGCTCTCCGGCAACTCTGCAACTTCCTTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAAtttctcct--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618249 228 + 64156825 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGGAGCCTTTTTATTAGC-GCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAC-GAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------T--------GGTAAAATGTCTCCT--- i rheMac3.chr19 C 0 T 590 s macFas5.chr19 55758990 228 + 59248254 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGGAGCCTTTTTATTAGC-GCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAC-GAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------T--------CGTAAAATGTCTCCt--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863990 226 + 51301725 ACCTCTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGAAGCCTTTTTATTAGA-ACTTTCTCGGCCTACATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAG-GAGGTGAGTAGCTCTCCGGCAGCTCTGcaacttcatttctttatttctcccttccaCAGT---------------t--------ggtaaaatttcct----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572695 228 + 50890351 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGAATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGAAGCCTTTTTATTAGA-ACTTTCTCGGCCTACGTCGCTCAGTGCCGCCGGGGAGTGGGGCCAGGTGTTAG-GAGGTGAGTAGCTCTCCGGCAGCTCTGCAATTTCATTTCTTTATTTCTGCATTCCACAGT---------------T--------GGTAAAAtttctcct--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925459 239 + 49145316 GCCTCCCAGGATTCCTGGTGGGTACAGGAAGTGCCCAGCAATGGTCAGGCCCTGAGGACCAATCACAGG---TGGGGCAGAAAGAGAAACCTTTTTATTAGC-GCCTTCTCAGCCTCCGGCACTCAG---AGCCGGGGAGTAGGGCCAGGCCTTGG-GAGGTGAGTAGCTGCTGGGCAACCCTGCGGCTTCATTTCTGTGTTTCTCCATTCCACAGTTAGTTGTTGTCTCTAT--------GGTAAAAttcctcc---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20035998 233 - 122678785 ACCTATCAGTAACCATGCTGGATGCAGGAAGTTCTTTGCAATGG----GTCCCAAGGGCCAATCACAGAGCTTGAGGCAGAACAAGAGACTCCTTTATCGGAGGCTTTTTACACCTGCAGCACTCA---CAACCAGAGAGGAGC-CCTGGTGCTGGAGAGGTAAGTAACATCCCTGCTTCTTT---ACTTCATTTCTCCATTTCCTTATTCAACTGT---------------TAAATCCGCAATAAAAATCTTCCTCCC i canFam3.chr1 C 0 C 0 a score=1530.000000 s hg38.chr19_GL949748v2_alt 945436 16 + 1064304 tttatttcatata-ttt s panTro4.chr19 59881054 16 + 63644993 tttatttcatata-ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803264 17 + 60714840 tttatttcatatatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319727 6 - 106955855 ttt-----------ttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759218 12 + 59248254 ----ctttttttt-ttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864216 5 + 51301725 -----------tt-ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572923 14 + 50890351 --ttttttttttt-ttt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20036231 15 - 122678785 -TTTCTTTGAATA-TTT i canFam3.chr1 C 0 I 5018 e calJac3.chr22 45925698 0 + 49145316 C e rheMac3.chr19 60618477 590 + 64156825 T a score=307678.000000 s hg38.chr19_GL949748v2_alt 945452 156 + 1064304 ttttt---ctgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctctgctcactgcaagctc---cgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaa s panTro4.chr19 59881070 156 + 63644993 ttttt---ttgagacgaagtctcgctctgtcgcccaggctggagtgcggtggcccgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcccgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803281 156 + 60714840 ttttt---ttgggacgaagtctcgctctgtcgcccaggctggagtgaggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccagctaa i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103319733 156 - 106955855 ttttt---ttgagacggaatctcgctctgtcgcccaggctggggtgcattggcgccatcttggctcactgtgagctc---cgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccaggcctggctaa i nomLeu3.chr10 C 0 I 13 s macFas5.chr19 55759230 157 + 59248254 ttttt-aattgagacagagtcttgctgtgtcgcccaggctggggtgtagtggggagatctcggctcactgcaaactc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864221 155 + 51301725 ttttt---ttgagacggagtctcactctgtcgcccaggctggagtgcagtggcctgatctcagctcac-gcaagctc---cacctcctgggtttacgccattctcctgcctcagcctcccgagtacctgggactacaggcgcccgccacttcgcccggctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572937 158 + 50890351 tttttaaattgagacagagtctcgctgtgtcgcccaggctggagtgcagtggggagatttcagctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925698 150 + 49145316 ttttt---ttgagac--agtctcactttgtcacccgggctagagtgcagtggtgcaatcaca------ttcaagcttgaacacctcccaggttcaagggagtttcatgcctcagcctcctgagtagct-ggactataggcatgagccaccacacatggccaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T a score=2202.000000 s hg38.chr19_GL949748v2_alt 945608 4 + 1064304 --tttt s ponAbe2.chr19 56803438 4 + 60714840 --tttt i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103319902 4 - 106955855 --tttt i nomLeu3.chr10 I 13 C 0 s macFas5.chr19 55759387 4 + 59248254 --tttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864376 4 + 51301725 --gttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47573095 4 + 50890351 --tttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925848 4 + 49145316 CATT-- i calJac3.chr22 C 0 T 938 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=5993.000000 s hg38.chr19_GL949748v2_alt 945612 5 + 1064304 ttgta s ponAbe2.chr19 56803442 5 + 60714840 ttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319906 5 - 106955855 ttgta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759391 5 + 59248254 ttgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864380 5 + 51301725 ttgta i papAnu2.chr19 C 0 T 1070 s chlSab2.chr6 47573099 5 + 50890351 ttgca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=910.000000 s hg38.chr19_GL949748v2_alt 945617 1 + 1064304 t s ponAbe2.chr19 56803447 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319911 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759396 1 + 59248254 t i macFas5.chr19 C 0 T 1080 s chlSab2.chr6 47573104 1 + 50890351 t i chlSab2.chr6 C 0 T 947 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e papAnu2.chr19 47864385 1070 + 51301725 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=2211.000000 s hg38.chr19_GL949748v2_alt 945618 8 + 1064304 ttttagta s ponAbe2.chr19 56803448 8 + 60714840 ttttagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319912 8 - 106955855 ttttagta i nomLeu3.chr10 C 0 T 980 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=100.000000 s hg38.chr19_GL949748v2_alt 945626 1 + 1064304 g s ponAbe2.chr19 56803456 1 + 60714840 g i ponAbe2.chr19 C 0 T 893 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 945627 8 + 1064304 gtggctca e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=15805.000000 s hg38.chr19_GL949748v2_alt 945635 103 + 1064304 cgcctgtaatcccagcactttaggaggctgaggctggcagatcacctgaggtcgggagtttgaga-------------------------------ccagcctggccagcatggcaaaaccccgtct--------ctattga s macFas5.chr19 55758317 142 + 59248254 cgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactccgtttaaaaaaaaaaaaaaa i macFas5.chr19 T 1080 C 0 s papAnu2.chr19 47863315 137 + 51301725 cgcctgtagtcccagctactggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactctgttt-----aaaaaaaaaa i papAnu2.chr19 T 1070 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=3276.000000 s hg38.chr19_GL949748v2_alt 945738 6 + 1064304 aaaaaa s macFas5.chr19 55758459 6 + 59248254 aaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863452 6 + 51301725 aaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572158 6 + 50890351 aaaaaa i chlSab2.chr6 T 947 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=91751.000000 s hg38.chr19_GL949748v2_alt 945744 84 + 1064304 tacaaaaattaaccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcacttgaagccgg s nomLeu3.chr10 103318940 84 - 106955855 tgcaaaaatcagccaggcgttgtggcgcatgcttgtaatcccaaatactc--aggaggctgaggcaggagaatcgcttgaacccgg i nomLeu3.chr10 T 980 C 0 s macFas5.chr19 55758465 84 + 59248254 ttgaaaaattagccaggcgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863458 84 + 51301725 ttcaaaaattagccaggcgttgcggcgcatgcctgcaatcccaggtactc--gggtggctgaggcaggagaatcgctcgaacccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572164 84 + 50890351 ttcaaaaattagccaggtgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45924914 86 + 49145316 tacaaaaattagcgaggtgtggtggcaggcgcctgtaatcccagatactcaggggaggctcaggcaggagaatcatttgaacccaa i calJac3.chr22 T 938 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=106635.000000 s hg38.chr19_GL949748v2_alt 945828 87 + 1064304 caggcggaggctgcggggagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaataaaataataa s ponAbe2.chr19 56802564 87 + 60714840 Caggcggaggctgcggggagccaagatcgtgccattgcactccagcctgcgtaac-agagcaagactcca--ctaaaaaaaaaaaaaaaa i ponAbe2.chr19 T 893 I 2 s nomLeu3.chr10 103319024 87 - 106955855 caggcggaggctgcggggagccgagatcctgccattgcattccagcctgggcaac-agagcaagactcca--ctaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 I 4 s macFas5.chr19 55758549 79 + 59248254 gaggcggaggctgcaaggagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863542 82 + 51301725 gaggcggaggctgcaaggagccgagatcacgccattgcactccaacctgggcaac-taaacaagactcca--ttaaaaataataa----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572248 82 + 50890351 gaggcggaggctgcaagcagccgagatcacgccattgcactccagcctggacaac-taaacaagactcca--ttaaaaataataa----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925000 90 + 49145316 gaggcggagattgcagtgagctgaaattgtgccattgcagtccagcttgggcaacaagagtgaaactctgtctcaaaaattaattattaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=431795.000000 s hg38.chr19_GL949748v2_alt 945915 200 + 1064304 -------------taaTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATAGTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacagttatctgggactc s ponAbe2.chr19 56802653 200 + 60714840 -------------TAGTATTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATAGTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATATCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcagcggcaatcacaattatctggggctc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 103319115 200 - 106955855 -------------aaaTACTGTGAGTGTAAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATAGTTGACGTGTCATTGATACTTCACTTGAAGTACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAACCAATCACAGCTGAGGTTTCTAAGcggtgattttcagcctcggcggcaatcacaattatctgggactc i nomLeu3.chr10 I 4 C 0 s rheMac3.chr19 60617887 191 + 64156825 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactc i rheMac3.chr19 T 590 C 0 s macFas5.chr19 55758628 191 + 59248254 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863624 194 + 51301725 -------------taatactgtgaGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATATTTCACTTGAAATGCGGTtggatttttattaataatatacttGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATTCTCA------GCGGCAATCACAATTATCTGGGACTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572330 194 + 50890351 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACATGTCATTGATATTTCACTTGAAATGCGGTTGGATTGTTATTAATAATATACTTAGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGcagtgattctca------gcggcaatcacaattatctgtgactc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925090 211 + 49145316 ttaattaattaattaatACCGCCAGTGTAAAACTGATGAATTTGGTGCTTTTCATGTGTCCCATAGTTGACGTGTCATTGATACTTAACTGGAAATGCAGTTGGATTTTTATTAAGAATATGCCTCGTGTGGT-GGAGAAGGGAGCCAGTCGCAGCTGAGGCTTCTAAGcggtgattctcagacca-tcagcaatcgtaattatctgggactc i calJac3.chr22 C 0 I 158 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=250576.000000 s hg38.chr19_GL949748v2_alt 946115 166 + 1064304 tcgaaagaactccagggtctgggcagtcccagtgtaaccaatcaagcagaatctctaggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaagatggaggaccacAGGTGGAGATCCGGAAGCTCAGGTGAAGGACCGCCCCCCAAC s ponAbe2.chr19 56802853 166 + 60714840 tcgaaagaactccagggtctgggcagcgccagtctgaccaatcaagcagaatctctgggcgttcgtgctttgaaatgaggctccagataggtaagtttaacaggcagccaagattgagaaccacAGGTGGAGATGGGGAAGCTCAGGTGAGGAATCGCCGCCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319315 166 - 106955855 tctaaagaactccagggtctgggccgccccagtctgaccaatcaagcagaatctctgggcgtttgtgctttgaaatgaggctccagataggtaagtttaacaggcagctaagactgagaaccacAGGTGGAGATCGGGAAGGTCAGGTGAGGAATCGCCCCCCCAC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60618078 158 + 64156825 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaatgaggccccagatgggtaagtttaacaggcagcctagattgagaaccacAGGTGCAGAACCGGAAGCTCAGGTCAGGCATTGA-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758819 158 + 59248254 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaacgaggccccagatgggtaagtttaacaggcagcctagattgagaaccacAGGTGCAGAACCGGAAGCTCAGGTCAGGCATTGA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863818 158 + 51301725 TTTAAAGAACTCCAGGGTCTGGGCAGCTGCAGTTTAACTCATCAACCAGCATCTCTGGGCGTTCGTGCTTTGAAATGAGGCCCCAGATGGGTAAGTTTAACAGGCAGCCTAGATTGGGAACCACAGGTGCAGATCCGGAAGCTCAGGTCAGGCATTGA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572524 158 + 50890351 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccggcatctctgggcgttcgtgctttgaaatgaggccccagatgggtgagtttaacaggcagcctagattgggaaccacAGGTGCAGATCCGGAAGCTCAGGTCAGGCATTGA-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925301 158 + 49145316 I e panTro4.chr19 59881226 0 + 63644993 C a score=17672.000000 s hg38.chr19_GL949748v2_alt 946281 18 + 1064304 ACCCCCCGCCCCCAAAAG s ponAbe2.chr19 56803019 18 + 60714840 ACCCCCCGCCCCCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319482 18 - 106955855 ACTCCCCGTCCCCAAACG i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60618236 13 + 64156825 --CCCCCGCCCCC---CG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758977 13 + 59248254 --CCCCCGCCCCC---CG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863976 14 + 51301725 -ccccccgccccc---cG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572682 13 + 50890351 --CCCCCGCCCCC---CG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925301 158 + 49145316 I e panTro4.chr19 59881226 0 + 63644993 C a score=442370.000000 s hg38.chr19_GL949748v2_alt 946299 219 + 1064304 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGAGAGAGAAGCC---TTATTAGAGCTTTCTCAACCTGCAGCCCTCATCTCCGCCGGCGAGTAGGGCCAGGTGTTGGGAGGTGAGTAGCTCTCCGGCAGCTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------TGGTAAAA s ponAbe2.chr19 56803037 219 + 60714840 ACCTCTCAGTAGTTCCGGTGGATACAGGAAGTGCTCAGCAAGGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGAAAGAGAAGCC---TTATTAGAGCTTTCTCCACCTACAGCCCCCATCGCCGCCGGAGAGTAGGGCCAGGTGTTGGGTGGTGAGTAGCTCTCCGGCAAGTCTGCAACTGCATTTGTTTATTTCTCCATTCCATAGT---------------TGGTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319500 219 - 106955855 ACCCCCCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAGCGATTACGCCCCGTGGGCCAATCACAGGGCTGCGGCCGAACGAGAAGCC---TTATTAGAGCTTTCTCAACCTACAGCCCTCACCGCCGCCGGAGAGTAGGGCCAGGTGCTGGGAGGTGAGTGGCTCTCCGGCAACTCTGCAACTTCCTTTCTTTATTTCTCCATTCCACAGT---------------TGGTAAAA i nomLeu3.chr10 C 0 I 524 s rheMac3.chr19 60618249 220 + 64156825 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGGAGCCTTTTTATTAGCGCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTACGAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------TGGTAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758990 220 + 59248254 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGGAGCCTTTTTATTAGCGCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTACGAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------TCGTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863990 220 + 51301725 ACCTCTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGAAGCCTTTTTATTAGAACTTTCTCGGCCTACATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAGGAGGTGAGTAGCTCTCCGGCAGCTCTGcaacttcatttctttatttctcccttccaCAGT---------------tggtaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572695 220 + 50890351 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGAATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGAAGCCTTTTTATTAGAACTTTCTCGGCCTACGTCGCTCAGTGCCGCCGGGGAGTGGGGCCAGGTGTTAGGAGGTGAGTAGCTCTCCGGCAGCTCTGCAATTTCATTTCTTTATTTCTGCATTCCACAGT---------------TGGTAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925459 232 + 49145316 GCCTCCCAGGATTCCTGGTGGGTACAGGAAGTGCCCAGCAATGGTCAGGCCCTGAGGACCAATCACAGG--TGGGGCAGAAAGAGAAACCTTTTTATTAGCGCCTTCTCAGCCTCCGGCACTCAG---AGCCGGGGAGTAGGGCCAGGCCTTGGGAGGTGAGTAGCTGCTGGGCAACCCTGCGGCTTCATTTCTGTGTTTCTCCATTCCACAGTTAGTTGTTGTCTCTATGGTAAAA i calJac3.chr22 I 158 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=6044.000000 s hg38.chr19_GL949748v2_alt 946518 8 + 1064304 TTTCTCCt s ponAbe2.chr19 56803256 8 + 60714840 TTTCTCCt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320243 8 - 106955855 tttttttt i nomLeu3.chr10 I 524 C 0 s rheMac3.chr19 60618469 8 + 64156825 TGTCTCCT i rheMac3.chr19 C 0 I 1812 s macFas5.chr19 55759210 8 + 59248254 TGTCTCCt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864210 6 + 51301725 tttcct-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572915 8 + 50890351 tttctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925691 7 + 49145316 ttcctcc- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=191197.000000 s hg38.chr19_GL949748v2_alt 946526 153 + 1064304 tttatttcatatatttttttt---ct-gagacggagtctcgctctgtcgcccaggctggagtgcggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcaggccattctcctgcctcagcctcccgagtagctgagactacaggcacc s ponAbe2.chr19 56803264 154 + 60714840 tttatttcatatatttttttt---tttgggacgaagtctcgctctgtcgcccaggctggagtgaggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320251 150 - 106955855 tttttttc---tttttttttt---tt-gaaacgaagtctggctctgtcgctcaggctggagtgcaatggtgcaatcttggcccactgcaagctc---cgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759218 151 + 59248254 ----ctttttttttttttttt-aatt-gagacagagtcttgctgtgtcgcccaggctggggtgtagtggggagatctcggctcactgcaaactc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i macFas5.chr19 C 0 I 28 s papAnu2.chr19 47864216 141 + 51301725 -----------tttttttttt---tt-gagacggagtctcactctgtcgcccaggctggagtgcagtggcctgatctcagctcac-gcaagctc---cacctcctgggtttacgccattctcctgcctcagcctcccgagtacctgggactacaggcgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572923 154 + 50890351 --tttttttttttttttttttaaatt-gagacagagtctcgctgtgtcgcccaggctggagtgcagtggggagatttcagctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i chlSab2.chr6 C 0 I 28 s calJac3.chr22 45925698 131 + 49145316 ----------------ttttt---tt-gagac--agtctcactttgtcacccgggctagagtgcagtggtgcaatcaca------ttcaagcttgaacacctcccaggttcaagggagtttcatgcctcagcctcctgagtagctg-gactataggcatg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I e panTro4.chr19 59881226 0 + 63644993 C a score=4140.000000 s hg38.chr19_GL949748v2_alt 946679 20 + 1064304 tgccactatgcccagctaat------------------------------ s ponAbe2.chr19 56803418 20 + 60714840 cgccaccacgcccagctaat------------------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320401 20 - 106955855 catcaccacgctcggctaat------------------------------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47864357 19 + 51301725 cgccacttcgcccggctaa------------------------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45925829 50 + 49145316 agccaccacacatggccaaCATTGAATAGCTTTTCTTTCtttcttttctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47573077 28 + 50890351 I e macFas5.chr19 55759369 28 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I e panTro4.chr19 59881226 0 + 63644993 C a score=5570.000000 s hg38.chr19_GL949748v2_alt 946699 9 + 1064304 -ttttttgta s panTro4.chr19 59881226 9 + 63644993 -ttttttgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803438 9 + 60714840 -ttttttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320421 8 - 106955855 --tttttgta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47864376 9 + 51301725 -gtttttgta i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45925879 9 + 49145316 ttttttttt- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47573077 28 + 50890351 I e macFas5.chr19 55759369 28 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=204850.000000 s hg38.chr19_GL949748v2_alt 946708 120 + 1064304 tttttagtagagacggggtttcac-catgttggccaggctgg-------------------------------tctcagt----------------------ccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagccttttttttttttttttt s panTro4.chr19 59881235 129 + 63644993 tttttattagagacggggtttcac-catgttggccaggctgg-------------------------------tctcagtctcctgacctc--gtgatccgcccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagcc-----------tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803447 129 + 60714840 tttttagtagagacagggtttcac-catgttggccaggctgg-------------------------------tctcagtcttctgacctt--gtgatccgcccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagcc-----------tttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320429 115 - 106955855 tttttagtaaagacggggtttcac-catgttggccaggatgg-------------------------------tctcagtctcctgacctt--gtgatccgcccgcctcggcctctcaaagtgtcgggattacagg-----------------GGCC--------ttttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759397 139 + 59248254 tttttggtagagactgggtttcac-cgtgttagccaggatag-------------------------------tctcgatctcctgacctt--gtgagccacccgcctcgacctcccaaagtgctgggatttcaggcgtgagccaccgcgcccggtc-ttcttttttttttttt i macFas5.chr19 I 28 C 0 s papAnu2.chr19 47864386 139 + 51301725 tttttagtagagacggggtttcac-cgtgtcagccaggatgg-------------------------------tctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcc-tttttttttttttttt i papAnu2.chr19 I 1 I 12 s chlSab2.chr6 47573105 139 + 50890351 tttttagtagagactgggtttcac-cgcgttagccaggatgg-------------------------------tctcgatctcctgacctt--gtgagccgcccgcctcgacctcccaaagtgctgggatttcaggcgtgagccaccgcgcccggtc-CTttttttttttcttt i chlSab2.chr6 I 28 I 1 s calJac3.chr22 45925888 170 + 49145316 tttttttttgagtcggagttttgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcacgcgccaccatgcccagct-aatttttgtattt--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=5618.000000 s hg38.chr19_GL949748v2_alt 946828 9 + 1064304 ttttttttt s panTro4.chr19 59881364 9 + 63644993 ttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803576 8 + 60714840 tttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320544 9 - 106955855 ttttttttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573245 9 + 50890351 tttcttttt i chlSab2.chr6 I 1 I 240 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926058 0 + 49145316 C e papAnu2.chr19 47864525 12 + 51301725 I e macFas5.chr19 55759536 0 + 59248254 C e rheMac3.chr19 60618477 1812 + 64156825 I a score=134.000000 s hg38.chr19_GL949748v2_alt 946837 4 + 1064304 cttc s panTro4.chr19 59881373 4 + 63644993 cccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103320553 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803584 0 + 60714840 C e calJac3.chr22 45926058 0 + 49145316 C e chlSab2.chr6 47573254 240 + 50890351 I e papAnu2.chr19 47864525 12 + 51301725 I e macFas5.chr19 55759536 0 + 59248254 C e rheMac3.chr19 60618477 1812 + 64156825 I a score=10590.000000 s hg38.chr19_GL949748v2_alt 946841 9 + 1064304 tcttttttg s panTro4.chr19 59881377 9 + 63644993 tcttttttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803584 9 + 60714840 tcttttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320557 9 - 106955855 ccttttttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759536 7 + 59248254 --ttttttg i macFas5.chr19 C 0 I 4 s chlSab2.chr6 47573494 9 + 50890351 tcttttttg i chlSab2.chr6 I 240 C 0 s calJac3.chr22 45926058 7 + 49145316 --ttagtag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864525 12 + 51301725 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=210405.000000 s hg38.chr19_GL949748v2_alt 946850 144 + 1064304 ----agggtcttactctgtttcccaggctggagcgctgtggcaggatctcggctcactgaacccttgacctctcaggttcaagcagtcctcacgcctcagcctttgaagtagctgggaccgtgggagggtgccaccacatctgttctg s panTro4.chr19 59881386 144 + 63644993 ----agggtcttactctgtttcccaggctggagcgctgtggcaggatctcggctcactgaacccttgacctctcaggctcaagcaatcctcacacctcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803593 144 + 60714840 ----agggtcttactctgtttcccaggctggagcgcagtggcaggatctcggctcactgaagccttgacctctcaggctcaagcaatcctcacacttcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320566 144 - 106955855 ----agggtcttactctgtttctcaggctggagcgctgtggcaggatctccgctcactgaagccttgacctctcaggctcaagcaatcctcacacctcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759547 139 + 59248254 ----ggagtctcgctctgtcacccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcc-----cg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47864537 138 + 51301725 ----agagtctcgctgtgtcgcccaggctggggtgcagtggggagatctcagctcactgcaaactccgcctcccgggttcccgccattctcctgccccagcctcccgagtagctgggactacaggcg-ccgccaccacgcc-----cg i papAnu2.chr19 I 12 C 0 s chlSab2.chr6 47573503 144 + 50890351 ----agggtcttactctgtttcccaggctggagcattgtggcaggatctcagctcaccggagccttgacctcttgggcgcaagcaatcctcgcacctgagcctctgaagtagctgggaccgtgggagggtgccaccacatctctcatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926065 115 + 49145316 agacggggtttcaccttgttgaccaggatgg-------------------------------tctcgatctcttgacctcatg--atccacccgccttggcctcccaaagtgctgggattataggcgtgagccaccgcgcccggccTG i calJac3.chr22 C 0 I 482 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=33797.000000 s hg38.chr19_GL949748v2_alt 946994 46 + 1064304 gctaataatattat--tattaccactgtttgcagagactcactagatg s panTro4.chr19 59881530 46 + 63644993 gctaataatattat--tattaccactgtttgtagagactcactagatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803737 46 + 60714840 gctaataataatat--tattaccactgtttgtagagactcactagatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320710 46 - 106955855 gctaataataatat--tattaccactgtttgtagagactcactagatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759686 29 + 59248254 gctagt-------t--ttttgtattttttagtagagac---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864675 29 + 51301725 gctaat-------t--ttttgcattttttggtagagac---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47573647 41 + 50890351 gctaaa-------taatattatcactctttgtagggactcactagatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926180 482 + 49145316 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=211798.000000 s hg38.chr19_GL949748v2_alt 947040 130 + 1064304 tagggtcttaatatgttgccgaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaaat-tctgggattataggcaggtgccaccgcgcccggccTAAATCTTTTCTTCTGTT s panTro4.chr19 59881576 125 + 63644993 tagggtcttagtatgttgccgaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaagt-tctgggattacaggcaggtgccaccgcgcccggccTAAA-----TCTTCTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803783 130 + 60714840 tagggtcttagtatgttgccgaagctggtctctaactcctgggctcaagcgatcttcatgcctcagactcccaaagt-tctgggattacaggcaggagccaccgcgcctggccTAAATCTTTTCTTCTGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320756 130 - 106955855 tagggtcttagtatgttgcggaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaact-cctgggattacaggcaggagccactgcgcccggccTAAATCTTTTCTTCTGTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759715 127 + 59248254 -ggggtttcaccgtgttaaccaggatggtctggatctcccgacctc--gtgatccgcccgtctcggcctcccaaagt-gctgggattacaggcttgagccaccgcgcccggcctttttttttttttttctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864704 127 + 51301725 -ggggtttcaccgtgttagccaggatggtctccatctcctgacctt--gtgagcctcccgcctcgacctcccaaagt-gctgggatttcaggcgtgagccaccgcgcccggtctttttttttttttttttt i papAnu2.chr19 C 0 I 1181 s chlSab2.chr6 47573688 131 + 50890351 tagggtgttagtatgttgcccaagctggtctctaactcccgggctccagagatcttactgcctcagactcccaaaatggctagaattacaggcaagagccaccgttcccggccTAAATCTTGTCTTCTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926662 130 + 49145316 tggggtttctccatgttggtcaggctggtctcgaactcctgacctcagatgatccgcctgcctcagcctcccaaagt-gctggaattacagggaggagccgcctcgcccagGCTAAACCTTTTCATCTGTT i calJac3.chr22 I 482 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=3279.000000 s hg38.chr19_GL949748v2_alt 947170 2 + 1064304 AG s panTro4.chr19 59881701 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803913 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320886 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759842 2 + 59248254 gg i macFas5.chr19 C 0 I 1169 s chlSab2.chr6 47573819 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926792 2 + 49145316 AG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864831 1181 + 51301725 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=48227.000000 s hg38.chr19_GL949748v2_alt 947172 54 + 1064304 AAATTAAGTGGTTCTGCCTGTCTcagtgg--ctcacgcctgtaatcgcagcgcttt s panTro4.chr19 59881703 56 + 63644993 AAATTCAGTGGTTCTGCCTGTCTCAGTGGCTctcacgcctgtaatcgcagcgcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803915 53 + 60714840 AAACTCAGTGG-TCTGCCTGTCTcagtga--ctcacgcctgtaatcgcagcgcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320888 54 - 106955855 AAATACAGTGGTTCTGCCTGTCTCCgtgg--ctcacgcctgtaatcgcagcgcttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573821 54 + 50890351 AAGTTCAGTGGTTCTgccggtctcggtgg--ctcacacctgtaataccagcgctgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926794 50 + 49145316 AAATTCAGTGGTTTGGGCAA----GGTGG--CTCATGTCTGTCATCCTAGCACCtt i calJac3.chr22 C 0 I 3424 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=96956.000000 s hg38.chr19_GL949748v2_alt 947226 130 + 1064304 gggaggccgaggcgggaggatcacctgaggtcgggagttcgagaccagcctgaccaacatgtagaaaccccatctctactaaaaatataaaattaggtgggcgtggtagcgcatacttgtaatcctagct s panTro4.chr19 59881759 130 + 63644993 gggaggccgaggcgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacatgtagaaaccccatctctactaaaaatatacaattaggtgggcgtgggagcgcatgcttgtaatcccagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803968 130 + 60714840 gggaggccgaggcgggcggatcacctgaggtcgggagttcgagaccagcctgatcaacatgtagaaaccccatctctcctaaaaatgtaaaattaggtgggcgtggtagcgcatgcctgtaatcccagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320942 130 - 106955855 gggaggccgaggtgggcggatcactggaggtcgggagttcgagaccagcctgaccaacttgtagaaaccccatctctactaaaaatataaaattaggtgggcgtggtggctcatgcctgtaatcccagct i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573875 113 + 50890351 gggagggcaaggcgggcagatcacctgaggtga-----------------tgaccaacatgtagaaaccccgtctccactaaaagtataaaatgaggtgggcatggtggagcatgcctgtaatcccagct i chlSab2.chr6 C 0 I 464 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=3559.000000 s hg38.chr19_GL949748v2_alt 947356 7 + 1064304 actcagg s panTro4.chr19 59881889 7 + 63644993 actcggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804098 7 + 60714840 actcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321072 7 - 106955855 actcagg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e chlSab2.chr6 47573988 464 + 50890351 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=6111.000000 s hg38.chr19_GL949748v2_alt 947363 3 + 1064304 agg s panTro4.chr19 59881896 3 + 63644993 agg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804105 3 + 60714840 agg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321079 3 - 106955855 agg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761013 3 + 59248254 agg i macFas5.chr19 I 1169 C 0 s papAnu2.chr19 47866012 3 + 51301725 agg i papAnu2.chr19 I 1181 C 0 s chlSab2.chr6 47574452 3 + 50890351 agg i chlSab2.chr6 I 464 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=358358.000000 s hg38.chr19_GL949748v2_alt 947366 175 + 1064304 ctgaggcaggagaatcacttgaacccgggaagcggaggttgcggggagcctagatcataccattgctctccagcctgcgcagcaagagagaaactgtctc----aaaaaataaaataaaataaaaTTCAGTGGTTCTGACTGGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC s panTro4.chr19 59881899 170 + 63644993 ctgaggcaggagaatcacttgaacccgggaggcggaggttgcggggagcctagatcataccattgctctccagcctgcgcagcaagagagaaactgtctc----aa-----aaaataaaataaaaTTCAGTGGTTCTGATTGGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804108 170 + 60714840 ctgaggcaggagaatcacttgaacccgggaggcggaggttgtggggagccgagatcataccattgctctccagcctgcacagcaagagagaaactgtctc----aa-----aaaataaaataaaaTTCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321082 165 - 106955855 ctgaggcgggagaattgtttgaacctgggaggcggaggtttcggggagccgggatcataccattgctctccagcctgcacagcaagaaagaaaccgtctc----aa----------aaaataaaGTCCAGTAGTTCTGAATTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620289 168 + 64156825 ctgaggcaggagaatcccttgaacccaggaggcggaggttggggggatccgagttcgtgccactgcactccagcctgggcagcaagagagaaactctctc-----------aaaaaaaaaaaaaaTGCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i rheMac3.chr19 I 1812 C 0 s macFas5.chr19 55761016 174 + 59248254 ctgaggcaggagaatcccttgaacccgggaggcggaggttgcggggatccgaggtcgtgccactgcactccagcctgggcagcaagagagaaactctctcaaaaaa-----aaaaaaaaaaaaaaTGCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866015 173 + 51301725 ctgaggcaggagaatcccttgaacccgggaggtggaggttgtggggatccgaggtcatgccactgcactccagcctgggcagcaagagagaaactgtcta-acaaa-----aaaaaaaaaaaaaattcagtggttCTGACTTGGGAAGGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i papAnu2.chr19 C 0 M 256 s chlSab2.chr6 47574455 166 + 50890351 ctgaggcaggagaatcccttgaacccgggaggcggaggttgcggggatccgaggtcgtgccactgcactccagcctgggcagcaagcgagaaactgtctc-------------aaaaaaaaaaaaTTCAGCGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=229315.000000 s hg38.chr19_GL949748v2_alt 947541 168 + 1064304 TAGTTAAGGTTGGCTCATAAGAGGATAGTTGTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGGATAGAGCTATAGAGAGCTCC---AAAAAAAAAAATATATTGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCAGTGCTAAGGTTTTGTGTC s panTro4.chr19 59882069 168 + 63644993 TAGTTAAGGTTGGCTCATAAGAGGATAGTTTTGTGTGCTTTTATTTCTGTTCTCTT---GGATTTAGGATAGAGCTATAGAGAGCTCCAAAAAAAAAAAAAAAATGTTGGAACAGGTCAGATGCTGTGGTTGCTGTGTGAGGAGTCCTGGGCAGTGCTAAGGTTTTCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804278 161 + 60714840 T-----ACGTTGGCTCACAAGAGGATAGTTTTGTGTGC-TTTATTTCTGTTCTCTTGGGGGATTTAGGATAGAGCTATAGAGAGCTCC----AAAAAAAAAATATGTTGGAACAGGTCAGATGCTGAGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTAAGGTTTTGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321247 166 - 106955855 TAGTTTATGTTGGCTCATAAGAGGATAGGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAAGATAGAGCTATAGAGAGCTCC-----AAAAAAAAATACATTGTAACAGGTCAGATGCTGTGATTGCTGTATGTGTAGTCCTGAGCAGTGCCCACGTTTTGCATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620457 151 + 64156825 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C----AAAAAACAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761190 151 + 59248254 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C----AAAAAACAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47574621 153 + 50890351 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C--AAAAAAAAAAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e papAnu2.chr19 47866188 256 + 51301725 M a score=399977.000000 s hg38.chr19_GL949748v2_alt 947709 192 + 1064304 TAATGAGTCCTCTTAACAAGAAGGTATTGTTTTT-TAT--TCACTGAGGTGAGGGAGCCTCTTAG-CATCATTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAAAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C s panTro4.chr19 59882237 191 + 63644993 TAATGAGTCCTCTTAA-AAGAAGGTATTGTTTTT-TAT--TCACTGAGGTGAGGGAGACTCTTAC-CATCATTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAGAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i panTro4.chr19 C 0 I 325 s ponAbe2.chr19 56804439 191 + 60714840 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCACTGGGGCGACAGAGCCTCTTAG-CAGCGTTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321413 193 - 106955855 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TATAAACATTGAGGTGACGAAGCCTCTTAG-CATTGTTTTAGTCCAGCTTCCAGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCAAGTTATTCACAGCTATCATCTAGAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTGCTA--t i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60620608 184 + 64156825 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCA-------CATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761341 184 + 59248254 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCA-------CATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTA--C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866444 192 + 51301725 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTTCTAT--TCATTGAGGTGGTGGAGCCTCTTATACCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCACAGCTAGCATATAGAGAGGTGTTACACCCTGTCTGTAAAG-TTTTGTTGCTactg--c i papAnu2.chr19 M 256 C 0 s chlSab2.chr6 47574774 185 + 50890351 TAATGAGTCCTCTTAA-GAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCA-GCAGCTAG-------CATATAGAGAAGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=696.000000 s hg38.chr19_GL949748v2_alt 947901 2 + 1064304 TA s ponAbe2.chr19 56804630 2 + 60714840 TA i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103321607 1 - 106955855 t- i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60620792 2 + 64156825 TA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761525 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866636 2 + 51301725 ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574959 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e panTro4.chr19 59882428 325 + 63644993 I a score=2680.000000 s hg38.chr19_GL949748v2_alt 947903 1 + 1064304 --t s panTro4.chr19 59882753 1 + 63644993 --t i panTro4.chr19 I 325 C 0 s ponAbe2.chr19 56804636 1 + 60714840 --t i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 103321608 1 - 106955855 --t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620794 3 + 64156825 TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761527 3 + 59248254 TAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866638 3 + 51301725 tat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574961 3 + 50890351 TAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=173328.000000 s hg38.chr19_GL949748v2_alt 947904 73 + 1064304 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacagtggcgctatctcagct s panTro4.chr19 59882754 73 + 63644993 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacagtggcgctatctcagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804637 73 + 60714840 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacaatggcgctatctcagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321609 73 - 106955855 tttttttttt------ttttttttgagacaaagtctagctctgttgcccaggctggagtacaatggtgctatctcagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620797 71 + 64156825 ATATATAAtt------ttgttgttgagacaaag--tagctctgtttcccaggctggagcgcaatggcactacctcagct i rheMac3.chr19 C 0 I 438 s macFas5.chr19 55761530 71 + 59248254 ATATATAAtt------ttgttgttgagacaaag--tagctctgtttcccaggctggagcgcaatggcgctacctcagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866641 77 + 51301725 atatataattttgttgttgttgttgagacaaag--tagctctgtttcccaggctggagtgcaatggcgctacctcagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574964 74 + 50890351 ATATATAAtt---ttgttgttgttgagacaaag--tagctctgtttcccaggctggagtgcaatggcgctacctcagct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930268 73 + 49145316 tttttttttt------tttgttttgagacagcgttttgctctgttgcccaggctggagtgcagtggcacagtctcagct i calJac3.chr22 I 3424 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=385887.000000 s hg38.chr19_GL949748v2_alt 947977 179 + 1064304 cactgcaacttccacctcccaggttcaagcaattctcgtgcctcagccttctaagtagctgggactacagccgcctgtcacca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccaccttg s panTro4.chr19 59882827 179 + 63644993 cactgcaacttccacctcccaggttcaagcaattctcgtgcctcagccttctaagtagctgggactacagccgcctgtcacca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804710 174 + 60714840 gactgcaacctccacttcccaggttcaagcaattct-----ctcagcctcctaagtagctgggacgacagccgcctgtcagca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccatctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321682 178 - 106955855 cagtacagcctccacctcccaggttcaagcaattctcgtgcctcagcctcttaagtaggtgagactacagccgcctgtcacc--acgtggctaattttcatatttttagtcgatatggggtttcactacgttggccaggctggtctcaagctccagacctcaggtgatcctcccgcctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761601 174 + 59248254 cactgcaacctccacctcccaggttcaagcaattctcgtacctc------ctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcgtatttttagtcgatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtaatcctcccgcttcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866718 180 + 51301725 cactgcaacctccacctcccaggttcaagcaattctcgtacctcagccttctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcgtatttttagtcaatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccgcttcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47575038 180 + 50890351 cactgcaacctccacctcccaggttcaagcaattctcgtacctcagcctcctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcatatttttagtcgatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcctgcttcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930341 180 + 49145316 cactgcaacctccaccccccaggttcaagcaattgtcctgcctcagcctcccaagtagctgggattacaggtgcccgccaccacacgtggctaattttcatatttttagtagggggcgggtttcaccatgttggccaggctagtctcaaactcctgacctcagatgatccttccacctcg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60620868 438 + 64156825 I a score=59431.000000 s hg38.chr19_GL949748v2_alt 948156 42 + 1064304 gactcccaaagtgctgtgattacaggcgtgagccaccgcacc s panTro4.chr19 59883006 42 + 63644993 gactcccaaagtgctgtgattacaggcgtgagccaccgcacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804884 42 + 60714840 gcctcccaaagtgctgcaattacaggcgtgagccaccccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321860 42 - 106955855 gcctcccaaagtgctgggattacaggtgtgagccatcccacc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47866898 42 + 51301725 gcctccctaagtgctggtattacaggcgtgagccaccccagc i papAnu2.chr19 C 0 I 28 s chlSab2.chr6 47575218 39 + 50890351 gcctccctaagtgctggtattacaggcatgagccaccCc--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930521 42 + 49145316 gcctcccaaagtgctgggatgataagcgtgagccactatgcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=54718.000000 s hg38.chr19_GL949748v2_alt 948198 72 + 1064304 cggccCTGttgtt---tttaaaatagagacagggtc---ttaagttgccaggctggtctggaacttctggactggagt s panTro4.chr19 59883048 75 + 63644993 cggccCTGttgttgtttttaaaatagagacagggtc---ttatgttgccaggctggtctggaacttctggactggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804926 75 + 60714840 cggccCTGTTGTCGTTTTTAAAAtagagacagggtc---ttatgttgccaggctggtctggaacttctggactggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321902 75 - 106955855 cggccCTGCTGttgtttttaaaatagagacagggtc---ttatgttgccaggcttgtctggaacttctggactggagt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45930563 76 + 49145316 ccgccCTGCTGCTGtttttgaaatagagacagagttttgttacattaacaggctggtctagaacttctgggctgga-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47575257 0 + 50890351 C e papAnu2.chr19 47866940 28 + 51301725 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=3611.000000 s hg38.chr19_GL949748v2_alt 948270 14 + 1064304 gat-cacccacctga s panTro4.chr19 59883123 14 + 63644993 gat-cacccacctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805001 15 + 60714840 gatccacccacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321977 15 - 106955855 gatccacccacctca i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47866968 14 + 51301725 ggc-caccaccccca i papAnu2.chr19 I 28 C 0 s chlSab2.chr6 47575257 1 + 50890351 --------------a i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930639 9 + 49145316 ------cccaccaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=549830.000000 s hg38.chr19_GL949748v2_alt 948284 273 + 1064304 gcttcccaaagtgcggggattgcaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccactatgcccagcacaatttttttt-ttttttgtattt-ttttgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcaatcc s panTro4.chr19 59883137 267 + 63644993 gcttcccaaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccgctatgcccagcacaatttttttt-------gtattt-ttttgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcaatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805016 271 + 60714840 gcttcccaaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAcctggctggagtgcagtggtgtgaccaaagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccactatgcccagcacatctttttat---ttttttattt-ttttgtagagacagggttttgccatgttgcccaggctggtcttagactc-------caagcaatcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321992 271 - 106955855 gcttcccaaagtgcggggattacaaacatcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttctctagctcaggtgatcctcccacctcagcctcctcagtagctgggaccacaggtgcatgccactatgcccagcacattttttttttttttttgtatttctttcgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcagtcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761775 270 + 59248254 gcctccctaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctagagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcaggtgatcctcccacctcagtgtcctgagtagctgggactacaggtgcatgccactatgcccagcgcttttttgtttgtttgtttgcttt-ttttgtggagacagagttttgccatgttggccagtctggtctgaaactc-------caagcaatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866982 258 + 51301725 gcctcccaaagtgcggggattacaagcctcagccaccacccccagtgttgtgtt------------tctgttttaccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcaggtgatcctcccgcctcagcatcctgagtagctgggactacaggtgcatgccactatgcccagcactttt-------tttgtttg------tttgtagagacagagttttgccatgttggccaggctggtctgaaactc-------taagcgatcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47575258 262 + 50890351 gcttcccaaagtgcggggattacaagcctcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcagttgatcctcccacctcagcgtcctgagtagctgggactacaggtgaatgccactatgcccagcacttt--------tttgtttgcttt-ttttgtagagacagagttttgccatgttggccaggctggtctgaaactc-------caagcaatcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930648 281 + 49145316 gctttccaaagtgctgggatgacaagcgtgagccaccgcacccggTGtttttttttttctgttattttttttttaccaggctggggtgcagtggtgtgattgtggctcactgcagccttaaa-tcctgggctcaggtgatcctcccacttcagcctccttagtagctgggattacaggtgcatgccaccgtgcccagcacatga-------atttttgtattt-tttggtagagagagggttttgccatgctctccaggctggtctcaaactccttggcgcaagcaatcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60620868 438 + 64156825 I a score=396688.000000 s hg38.chr19_GL949748v2_alt 948557 142 + 1064304 tcccaccttggcttcccaaagtgtttggggttccaggtgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCACTAAGTTATCTTTAA------GCCtttttttttttt--- s panTro4.chr19 59883404 141 + 63644993 tcccaccttggcttcccaaagtgtt-ggggttccaggtgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCGCTAAGTTATCTTTAA------GCCtttttttttttt--- i panTro4.chr19 C 0 I 12 s ponAbe2.chr19 56805287 136 + 60714840 ccccaccttggcttcccaaagtgtt-ggggttccaggtgtgagccatggccccccggccAGCTTCAGTACAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCACTAACTCATCTTCAA------GCCttttttt-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322263 140 - 106955855 tcccgccttggcttcccaaagtgtt-ggggttccaggcgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGA-ACCAGGCTCCACCACTAACTCATCTTCAA------GCCtttttttttttt--- i nomLeu3.chr10 C 0 I 23 s rheMac3.chr19 60621306 140 + 64156825 tcccgccttggcttcccaaagtgct-ggggttacaggtgtgagccacgg-cccccagccagcttcagtaAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATCTTCAA------GCCtttttctttttt--- i rheMac3.chr19 I 438 I 1988 s macFas5.chr19 55762045 140 + 59248254 tcccgccttggcttcccaaagtgct-ggggttacaggtgtgagccacgg-cccccagccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCCTCTTCAA------GCCtttttttttttt--- i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47867240 140 + 51301725 tcccaccttggcttcccaaagtgct-gggattacaggtgtgagccacgg-gcCCCAGCCAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATcttcaa------gctcttttttttttt--- i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 47575520 140 + 50890351 ttccgccttggcttcccaaagtgct-ggggttacaggtgtgagccatgg-cccccagccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATCCTCAA------GCCtttttttttttt--- i chlSab2.chr6 C 0 I 15 s calJac3.chr22 45930929 149 + 49145316 tcccaccttggcttcccaaagtgtt-ggtgttacaagtgtgagccacgg-cacctggtcAGCTTCAGTAAAGTAAAAGCCAGACACCTGTGTCCTGAGACCAGGCTCCACCACTCACTCACCTTCAACTCAATGttttttccttttttttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=41621.000000 s hg38.chr19_GL949748v2_alt 948699 24 + 1064304 --gagacagtttcactcttgtcgccc s panTro4.chr19 59883557 24 + 63644993 --gagacagtttcactcttgtcaccc i panTro4.chr19 I 12 C 0 s ponAbe2.chr19 56805423 24 + 60714840 --gagacagtttcactcttgtcaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322426 24 - 106955855 --ttgacagtttcactcttgtcgccc i nomLeu3.chr10 I 23 C 0 s macFas5.chr19 55762196 24 + 59248254 --gagacagtttcactcttgttgccc i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47867397 24 + 51301725 --gagacagtttcactcttgttgccc i papAnu2.chr19 I 17 C 0 s chlSab2.chr6 47575675 24 + 50890351 --GAGACAGTTTCACTCTTGTTGCCC i chlSab2.chr6 I 15 I 1446 s calJac3.chr22 45931078 24 + 49145316 tagatggagtctagctctc-tcacc- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=185907.000000 s hg38.chr19_GL949748v2_alt 948723 124 + 1064304 caggctggagtgcagtggcgccatgtcagctcaccacaacctctgcctcccactcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcacctgccaccacgcc s panTro4.chr19 59883581 124 + 63644993 caggctggagtgcagtggcgccatgtcagctcaccacaacctctgcctcccactcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcacctgccaccacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805447 124 + 60714840 caggctggagtgcagcggtgccatgtcagctcaccacaacctccgcctcccactctcgggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcgcacaccaccacact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322450 124 - 106955855 caggctggagtgcaatggcaccatgttggctcaccacaacctctgcctcccactcccgggttcaagcaattctcccgcctcagcctcccaagtagctggaactatgggtgcccgccaccagacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55762220 113 + 59248254 caggctggagttcaatg-----------gctcaccacaccctcggcctcccactcccgggttctagcgattctcctgcctcagcctcccaagtagccaggactacaggcatgtgtcaccacgcc i macFas5.chr19 C 0 I 1478 s papAnu2.chr19 47867421 75 + 51301725 caggctggagttcaatg-----------gctcaccaca--------------------------------------gcctcagccccccaagtagccgggactacaggcatgtgtcaccacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577145 115 + 50890351 caggctggagtgcagtggcgccatctcagctcactgca------agctctgcctcccgggttcatgccattct---gcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcc i chlSab2.chr6 I 1446 C 0 s calJac3.chr22 45931102 117 + 49145316 caggctggagtgcaatggcacaatctcgtctcactgcaacccctgc------ctcctgagttcaagcgattttcctgcttaaggctctcgagtagctgtgactacaggcacacaccacc-cact i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=125174.000000 s hg38.chr19_GL949748v2_alt 948847 61 + 1064304 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc s panTro4.chr19 59883705 61 + 63644993 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805571 61 + 60714840 cggctaattttt-tgtattttc--agtagagacggggtttcactgtgttagcaaggatggtctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322574 61 - 106955855 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55763811 61 + 59248254 cggctaattttt-tgtattttt--agtagagatggggtttcactgttttagccaggatggtctt i macFas5.chr19 I 1478 C 0 s papAnu2.chr19 47867496 60 + 51301725 cgactaa-tttt-tgtactttt--agtagagacggggtttcatcatattggccaggctggtctc i papAnu2.chr19 C 0 I 1592 s chlSab2.chr6 47577260 61 + 50890351 cggctaatgttt-tgtattttt--agtagagacggggtttcactgttttagccagaatggtctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931219 64 + 49145316 tggccaccttttgtatattttttaaatagagatggggtttcaccatgttggccaggctggtctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=71186.000000 s hg38.chr19_GL949748v2_alt 948908 33 + 1064304 gatctcctgacctca--cgatccgcccgcctcggc s panTro4.chr19 59883766 33 + 63644993 gatctcctgacctca--cgatccgcccacctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805632 33 + 60714840 gatctcctgacctca--tgatccgcccgcctcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322635 33 - 106955855 gatctcctgacctcg--tgatccgcccacctcagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55763872 33 + 59248254 gatctcctgacctca--tgatccacctgcctcagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869148 33 + 51301725 gatctcctgacctcg--tgatccacctgcctcagc i papAnu2.chr19 I 1592 C 0 s chlSab2.chr6 47577321 33 + 50890351 gatctcctgacctcg--tgatccacctgcctcagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931283 35 + 49145316 gaactcctgaccccaagtgatctgcctgcttcagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=125391.000000 s hg38.chr19_GL949748v2_alt 948941 42 + 1064304 ctcccaaagtgctgggattgcaggcgtgagccaccgcgcccg s panTro4.chr19 59883799 42 + 63644993 ctcccaaagtgctgggattgcaggcgtgagccaccgcgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805665 42 + 60714840 ctcccaaagtgctgggattacaggcgtgagccactgcgccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322668 42 - 106955855 ctcccaaagtgctgggattacaggcgtgagccactgcgtccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60623434 42 + 64156825 ctcccaaagtgctgggattacaggcgtgagccaccgtgcctg i rheMac3.chr19 I 1988 C 0 s macFas5.chr19 55763905 41 + 59248254 -tcccaaagtgctgggattacaggcgtgagccaccgtgcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869181 41 + 51301725 -tcccaaagtgctgggattacaggcgtgagccaccgtgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577354 41 + 50890351 -tcccaaagtgctgggattataggcgtgagccaccgtgcctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931318 42 + 49145316 ctcccaaagcgctgggattacaggtatgagccatctcacctg i calJac3.chr22 C 0 I 1750 e canFam3.chr1 20036246 5018 - 122678785 I a score=129125.000000 s hg38.chr19_GL949748v2_alt 948983 54 + 1064304 gcTGTGTGTTTGCATTATCATATTCAGCCCAGTTTTCACGAAGTTTCTTGTCTC s panTro4.chr19 59883841 54 + 63644993 gcTGTGTGTTTGCATTTTCATATTCACCCCAGTTTTCACGAAGTTTCTTGTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805707 54 + 60714840 gctGTGTGTTTGCATTTTCTTATTCACCCCAGTTTTCACAAAGTGTCTTGTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322710 54 - 106955855 gcTGTGTGTTTGCATTTTCATATTCACCCCAGTTTTCACGAAGTGTCTTGTCTC i nomLeu3.chr10 C 0 I 123 s rheMac3.chr19 60623476 54 + 64156825 gctgtgtgtttgcattttcaCATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55763946 54 + 59248254 gcTGTGTGTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869222 54 + 51301725 gctgtgtgTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577395 54 + 50890351 gcTGTGTGTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45931360 1750 + 49145316 I a score=440166.000000 s hg38.chr19_GL949748v2_alt 949037 188 + 1064304 CTGGGTGATCCACGTAGCTCCCCACTTCCTTATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA s panTro4.chr19 59883895 188 + 63644993 CTGGGTGATCCACATAGCTCCCCACTTCCTTATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805761 188 + 60714840 CTGGGTGATCCACATAGCTCCCCACTTCCTCATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTACAGGTTAACTTTTAGAACCTGAGCAGCCCCTCGGAGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322887 188 - 106955855 CTGGGTGATCCACATAGCTCCCCACTTCCTCATCTGATCTATGCTTCTCCTTTCATTGTTGTATAACTACTTTGCTATAATGAGAGAGTGTTTTTGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i nomLeu3.chr10 I 123 C 0 s rheMac3.chr19 60623530 186 + 64156825 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGTTGTAAT--GAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATGAAAATAACTAGCTGGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764000 188 + 59248254 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTGTGCTTGTCCTTTCATTGTTGTGTTACTACTTTGTTGTAATGAGAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCGGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATGAAAATAACTAGCTGGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869276 182 + 51301725 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTGCTTTGTTGTAATGAGAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACA------GGTTATTttgcaattaaaataactagCTGGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577449 188 + 50890351 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTGGTTGTAATGAGAGAGAGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45931360 1750 + 49145316 I a score=1676010.000000 s hg38.chr19_GL949748v2_alt 949225 630 + 1064304 ctgaggcaggtgaatcac--gaggtcaggagttcgagaccagcctggccaacttggtgaaacccccc-------atctctactaaaaatacaaaaaaattagctgggcacagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgtagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactccgtctcaaaaaaaaaaaaaaaaaaaata------------caaaaaGtagctgagc---gtggtggtgggtgcccata--atcccagctagtcgggaggctgaggcaggagaactgtttgaacctgggaggcagaggttgcagtgagctgagatcgtactactgtactccagcctgggctgcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagcaatcctcccactgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttatttttcatggagatgggggtctcactatgttgcccaggc s panTro4.chr19 59884083 630 + 63644993 ctgaggcaggtgaatcac--aaggtcaggagttcgagaccagcctggccaacttggtgaaaccccccccccccaatctctactaaaaatacaaaaaa-ttagctgggcacagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgtagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactctgtctcaaaaaaaaaaaaaaaaaaaa------------------aaGGagctgagc---gtggtggtgggtgcccata--atcccagctagtcgggaggctgaggcaggagaattgtttgaacctgggaggcagaggttgcagtgagctgagatcgtactactgtactccagcctgggctgcagagtgaaa--ctctctcaaaaataagtaaataaaaataaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagcaatcctcccactgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttatttttcgtggagatgggggtctcactatgttgcccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805949 617 + 60714840 ccaaggcgggtgaatcac--gaggtcaggagtttgagaccagcctgg-caacttggcgaaaccccc--------atctctactaaaaatacaaaaaa-ttagctgggcatagtggtgaatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatcccggaggcggaggttccagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagattccgtctcaaaaaaaaaaatacaaa---------------------aaGtagctgagc---gtggtggtgggtgcccata--atcccagctactcgagaggctgaggcaggagaattgtttgaacctgggaagcagaggttgcagtgagctgagatcgtactactgcactccagcctgggcagcagagtgaaa--ctgtctcaaaaataagt-aataaaaataaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagtgatcctcccaccgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttattttttgtggagatgggggtctcactatgttgcccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103323075 642 - 106955855 ccgaggtgggtgaatcac--gaggtcaggagttcgagaccagcctggccaacttggtgaaaccccc--------atctgtactaaaaatacaaaaaa-ttagctgggcatagtggtgaatgcctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccgggagatagaggttgcagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAAAAAGtagccgagcgtggtggtggtgggtgcccata--atcccagctactcgggaggctgaggcaggagaattgtttgaacctgggaggcggaggttgccgtgaactgagatcatactactgcactccagcctgggcagcagagtgaaa--ctgtctcaaaaataagtaaataaaaataaaatgagctgaggtcttgctctgttgtccagatgggagtgcagtggcacaatcaaggctcactgcagtttcaatctcccaggctcaagcaatcctcccatcgcagcctcctgagtagctgggcctacaggcatgtacc-ccacccactgct---aacttactttttgtggagatgggggtctcactatgttgcccaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60623716 612 + 64156825 Tcgaggtgggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtaatcccagctgcacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaat----aaata--------------------aaGtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcaatgagctgagatcataccactgtactccagcctgggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgtccagatgggagtgcagtggcaccatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactacaggcatgcaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764188 613 + 59248254 Tcgaggtgggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtaatcccagctgcacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaataaaaaaata--------------------aaGtagctgagt------gtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcaatgagctgagatcataccactgtactccagcctgggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgcccagatgggagtgcagtggcaccatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactacaggcatgcaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869458 614 + 51301725 TCGAGGCGGGcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaat-caaaaa--ttagct-ggcatagtggtgaacacctgtaatcccagctacacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagtgagctgagattgtagcaatgcactccagccagggtgac---agtgacactccgtctcaaaaaaaataaaaaaata--------------------aagtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgaactccaaccagggcagcagagtgaaa--ctgtctcaaaaataagtaaataaaagtgaAACGAGAttaggtttcactctgttgcccagatgggagtgcagtggcacaatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactataggcatgcaccaccagccACTGCT---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577637 614 + 50890351 Tcgagaggggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtgatcccagctacacgggcagctgaggcaggagaattgcttgaatccgggaggtggaggtcgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaa--aataaata--------------------aaGtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggtaggagaattgtttgaacctgggaggcggaggttgcagtgagctgagatcataccactgtactccagccagggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgcccagatgggagtgcagtggcaccaccaggcctcactgcagtttcagtctcccaggctcaagcgatcctcccacctcggcctcctgagttgctggggctacaggcacgtaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45933110 622 + 49145316 ccaaagtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggaaaaacctt---------ctttctcctaaaaatacaaaaaa-gtatccaggtgtggtggtgcacacctgtaatcccagctactcgggaggccgaggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatggtgccattgcacttcagcctgggcaatgagagcgaaactccatctcaaaataaataataaaataaaat----------------gaggagctgggt---gcggtgg-gcatgcacgtgtcatctcatctactgaggaggctgaggcaggagaatggcttgaaaccagcaggcggaggttgcagtgagccaagatcatgccattgcactccagcctgggggagaaagtgagactctgtctcaaaaataa---aat-aaattaaaaagagaTGAggtcctgctctgttgcccagatgggagtgcagtgggacaatcaagg------gcagttttaacctcccaggttcaagcgatcctcccacctcagcctcctgagtagccgggactgcagctgcacaccaccccctcctaccatgaacttattttttgtggaaatgggggtctcactatgttgcccaggc i calJac3.chr22 I 1750 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=1358383.000000 s hg38.chr19_GL949748v2_alt 949855 422 + 1064304 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCGTGGCACAGCAGGAACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCACTCCTCCCTTGATTGTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTTCGGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTATCTGATCACGACCTTCTCCCTGGCACACGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGTAGAAATCCTCACCACCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGATGAAGTC s panTro4.chr19 59884713 410 + 63644993 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCATGGCACAGCAGGA------------GACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTGATTCTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTTCGGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTATCTGATCACGACCTTCTCCCTGGCACACGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGTAGAAATCCTCACCAGCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGATGAAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56806566 422 + 60714840 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCATGGCACAGTGGGGACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCAGAGCTCCCACGTGGGACAAGATGGTGTCTTCTGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTTTCTGATCACGACCGCCTCCCTGGCACATGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCATCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTCAGAGAGCAAAGGATGAACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103323717 422 - 106955855 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTCGTTCATGGCACAGTGGGGACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTCCGGCGCCGATGGGCTTCAACCTGCCGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTCTCTGATCACGACCGTCTCCCTGGCAAATGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAAGCTGATAGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGTCACAGCTACTGGGTGGAGATGGCGACCATCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGTGCAAAGGACGAACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624328 421 + 64156825 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTTCCCTTGTTCATGGCACCGAGGGGACTGGCA-CTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------CTCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCACTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCATCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764801 421 + 59248254 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTTCCCTTGTTCATGGCACCGAGGGGACTGGCA-CTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------CTCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCACTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCATCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870072 420 + 51301725 tgggagtttGTTCTTGAAGAAGCAGGGTACTGTGAGG--GTGCCCTTGTTCATGGCACAGAGGGGACTGGCA-TTGAGACAGAAGTGCTGATCACCATCCCTCTCCGTTCCTCCCTTAATTCTC---------------ATCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCGAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCTTGGGAAATGAAGTCCAGAAGATCCCCCAGAACGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCATTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTG-AAAGATGCACCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i papAnu2.chr19 C 0 M 192 s chlSab2.chr6 47578251 421 + 50890351 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTGCCCTTGTTCATGGCACTGAGGGGACTGGCA-TTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCATTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCACCGAGTGGATCTGTCTGAGAGAGCAAAGGATGAACTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45933732 408 + 49145316 tggGAATTTGTTCTTGAAGAAGCAGGGTAGATGGTGACTGTATGCTTGTCCATGGCACAGAGGGGACTGGCT-GTGAGACAGGGGTGCTGAC---------------GTCCTCCCTTCATTCTC---------------ACTGGAGCTCCCAAGTGGGACGAGATGGTGTCTTCTGTGCCACTGGACTTCAACCTGCAGGCTCTTCTGGAGCAGCTCAGCCAGGATGAGTTGAGCCAGTTCAAGTCTCTGATCAGGACCATCACCCTGGGAAATGAGCTACAGAAGATCCCCCAAACAGAGGTAGACGAGGCTGATGGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGCCCCAGCTACTGGATGGAGACGGCCACCATCCAGGTCTTTGAAAAGATGCACCGGGTGGATCTGTCTGAGAGAGTGAAGGATGAACTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041264 437 - 122678785 TGGGAGTTGGTTCCTAAAGCAGCAGGTTGGGCAGTGATAATTGCCCAGTTCTTGGCACAGAGGCAACTGTCATTTGAAGTAGGAATACTGAT--TCGCTCTCTTTCATTTCTTCCCTTATTCTTCTTTAATGCCCAAAGCTCAGATCTCTCATGTAGAACAAGATGGAACCTTCTGCACAGCTGGGTTTCAACCTGCAGCCCCTTCTAGAACAGTTTGCCCAGGATGAGCTGAGCCAGTTCAAGTCTCTGTTGAGGCCCCTTTCCCTACAAGATGAATTACAGCACATCCCTGCGACAGAGGTAGAGGAGGCCGATGGGAAGCAGCTGGCAGAAATTCTTATCAACCACTGCCCCAGCCACTGGGTAGAGATGGTGACCATCCAGATTTTTGACAAGATGAACCGAACCGATCTGTCTGAGAGAGCAAAGGATGAGCTC i canFam3.chr1 I 5018 C 0 a score=167046.000000 s hg38.chr19_GL949748v2_alt 950277 65 + 1064304 AGAGGTGAGTGGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT s panTro4.chr19 59885123 65 + 63644993 AGAGGTGAGCGGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56806988 65 + 60714840 AGAGGTGAGTGGAAATCGGTCTACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324139 65 - 106955855 AGAGGTGAGTGGAAATCGGTCCACCCTGTGTCCTAGGAGGAAGCAGGTGTCCTCTCCAGGACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624749 63 + 64156825 AGAGGTGAGCAGAAATCGGTCCGCACTGTGTCCTAGGAGGAAGCAGGCGACCTCTCCAGGACT-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765222 63 + 59248254 AGAGGTGAGCAGAAATCGATCCGCACTGTGTCCTAGGAGGAAGCAGGCGACCTCTCCAGGACT-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578672 63 + 50890351 AGAGGTGAGCAGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGACGACCTCTCCAGGACT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934140 65 + 49145316 AGAGGTGAGCGGAACTCGGTCCACACTGTGTCTTAGGGGAAAGCAGAAGTCCTCTCCAGGATGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041701 65 - 122678785 AGGGGTAAGTAGAAACAAGCCCACATGGTGTCCTAGGAGGAAGGAGGAGTAGCCTCCAGGGTTTT i canFam3.chr1 C 0 I 8 e papAnu2.chr19 47870492 192 + 51301725 M a score=23042.000000 s hg38.chr19_GL949748v2_alt 950342 13 + 1064304 AGAAATTCAGAAg s panTro4.chr19 59885188 13 + 63644993 AGAAATTCAGAAg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807053 13 + 60714840 AGAAATTCAGAAg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324204 13 - 106955855 AGAAATTCAGAAg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624812 8 + 64156825 -----TTCAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765285 8 + 59248254 -----TTCAGAAg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578735 8 + 50890351 -----TTCAGAAg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934205 13 + 49145316 AGGAATTCAGAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e papAnu2.chr19 47870492 192 + 51301725 M a score=83506.000000 s hg38.chr19_GL949748v2_alt 950355 46 + 1064304 gccaggcgcgctggctcacgcctgtcgtcccagccctttgggaggc s panTro4.chr19 59885201 46 + 63644993 gccaggggcgctggctcatgcctgtcgtcccagcactttgggaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807066 46 + 60714840 gccaggcgtgctggctcacgcctgtcatcccagcactttgggaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324217 46 - 106955855 gccaggcacgctcgctcacgcctgtcatcccagcactttgggaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624820 46 + 64156825 gccaggcgcactggctcacgcctgtcatcccagcactttgggaggc i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55765293 46 + 59248254 gccaggcgcactggctgacgcctgtcatcccagcactttgggaggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578743 46 + 50890351 gccaggcgcactggctcacgcctgtcatcccagcactttgggaggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e papAnu2.chr19 47870492 192 + 51301725 M a score=104210.000000 s hg38.chr19_GL949748v2_alt 950401 93 + 1064304 tgaggcggttggaccacctgagggtcaggagtttgagaccag-cctgaccaacatggtgatgaaacagcatctctactaaaaatacaaaaattt s panTro4.chr19 59885247 90 + 63644993 tgaggcggttggaccacctgagggtcaggagtttgagaccag-cctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaattc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807112 91 + 60714840 cgaggtggttggatcacctgagggtcaggagtttgagaccagccctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324263 90 - 106955855 cgaggcggttggatcacctgagggtcaggagtttgagaccag-cctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaatta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55765339 89 + 59248254 caacttgggtggatcacctga-ggtcaggagtttgaaaccag-cctgaccaacatga---tgaaaccgcatctctactaaaaatataaaaatta i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578789 89 + 50890351 cgacttgggtggatcacctga-ggtcaggagtttgaaaccag-cctgaccaacatgg---tgaaaccgcatctctactaaaaatataaaaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e papAnu2.chr19 47870492 192 + 51301725 M e rheMac3.chr19 60624866 19 + 64156825 I a score=93606.000000 s hg38.chr19_GL949748v2_alt 950494 55 + 1064304 gctggacgtggtggcagacacctgtaatcccagctactccgggaggctgaggcag s panTro4.chr19 59885337 55 + 63644993 gctggacgtggtggcagacacctgtaatcccagctactccgggaggctgaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807203 54 + 60714840 gctggttgtggtggcagacacctgtaatccccgctact-cgggaggctgaggcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324353 54 - 106955855 gctgggcgtggtggcagacacctgtaatcccagctact-tgggaggcggaggcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55765428 54 + 59248254 gccaagcgtggtggcagacacctgtaatcccagctact-cgggaggctgaggcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870686 54 + 51301725 gccgagcgtggtggcagacacatgtaatcccagctact-cgggaggctgaggcag i papAnu2.chr19 M 192 C 0 s chlSab2.chr6 47578878 54 + 50890351 gccgggcgtggtggcagacacctgtaatcccagctact-caggaggctgaggcag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e rheMac3.chr19 60624866 19 + 64156825 I a score=199493.000000 s hg38.chr19_GL949748v2_alt 950549 103 + 1064304 gagaatcacttaaatctaggaggcgggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattctgtctc--aaaaaaaaaa s panTro4.chr19 59885392 105 + 63644993 gagaatcacttaaatccaggaggcgggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattctgtctcaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807257 101 + 60714840 gagaatcacttaaatccaggaggcaggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagcaaaaattctgtctc-----aaaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324407 102 - 106955855 gagaatcacttaaacccaggaggcgggggttgctatgagctgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattccatctc---aaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624885 96 + 64156825 gagaatcccttgaacccaggaggtggaggttgcagtgagccgagatcacgccattgcactccagcctgggcaac--gagc-aaaactcggtctc-------aaaaa i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55765482 96 + 59248254 gagaatcccttgaacccaggaggtggaggttgcagtgagccgagatcacgccattgcactccagcctgggcaac--gggc-aaaactcggtctc-------aaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870740 96 + 51301725 gaggatcccttgaacctgggaggcggaggttgctgtgaaccaagatcacgccactgcactccagcctgggcaac--gagc-aaaactccgtctc-------aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47578932 96 + 50890351 gagaatcccttgaacccaggagatggaggttgctgtgagctgagatcacgccactgtactctagcctgggcaac--gagc-aaaacttggtctc-------aaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C a score=12245.000000 s hg38.chr19_GL949748v2_alt 950652 5 + 1064304 agaaa s panTro4.chr19 59885497 5 + 63644993 agaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807358 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324509 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624981 5 + 64156825 agaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765578 5 + 59248254 agaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870836 5 + 51301725 agaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579028 5 + 50890351 agaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20041774 5 - 122678785 AGGCA i canFam3.chr1 I 8 C 0 e calJac3.chr22 45934218 0 + 49145316 C a score=258319.000000 s hg38.chr19_GL949748v2_alt 950657 81 + 1064304 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAATGCAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC s panTro4.chr19 59885502 81 + 63644993 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACGCAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807363 81 + 60714840 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACACAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324514 81 - 106955855 CGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACACAGGTGCTGGATCGTCATAAACCCTGGTGTCTGTCCTGGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624986 81 + 64156825 TGGCATTGAGGCTTAGAGAGGGACTGCTTGTTCTGAATACAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765583 81 + 59248254 TAGCATTGAGGCTTAGAGAGGGACTGCTTGTTCTGAATACAGGTGCTAGATCTTCATCAACTCTGGTGGCTGTCCTGGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870841 80 + 51301725 tggcaTTGAGGC-TAGAGAGGGACGGCTTGTTCTGAACGCAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579033 81 + 50890351 TGGCATTGAGGCTTAGAGAGGGACTGCTTGTTCGTAACACAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934218 81 + 49145316 TGGCATTAAGGCTTAGCGAGAGCCTGCCTGTCCTGAACACAGATGCCAGATCTTCATAAACTCTGATGTCTGTCCTGGTCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041779 71 - 122678785 TAACATTGAACCCTGAAGAGG--CCACCTGTCCTGAACCCAAATGCTAGACCTTCATAAAGTCTAGTGG-TGTC------- i canFam3.chr1 C 0 C 0 a score=2044.000000 s hg38.chr19_GL949748v2_alt 950738 8 + 1064304 TTATTTTC s chlSab2.chr6 47579114 8 + 50890351 TTATTTTC i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45934299 8 + 49145316 TTACTATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041850 8 - 122678785 TTCCATTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56807444 0 + 60714840 C e nomLeu3.chr10 103324595 0 - 106955855 C e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=2198.000000 s hg38.chr19_GL949748v2_alt 950746 22 + 1064304 TACCTACttctttttttttttt s calJac3.chr22 45934307 22 + 49145316 TACCTAttttttgttttgtttt i calJac3.chr22 C 0 I 796 s canFam3.chr1 20041858 22 - 122678785 TAGCTATTTCTACTCTGTCCTG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56807444 0 + 60714840 C e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=227.000000 s hg38.chr19_GL949748v2_alt 950768 7 + 1064304 tttttgt s canFam3.chr1 20041880 7 - 122678785 GTATTGT i canFam3.chr1 C 0 I 933 e ponAbe2.chr19 56807444 0 + 60714840 C e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 950775 899 + 1064304 ccttttatttttttattttttattttattattAttattttttttattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaactcgtcatctagcattaggtatatctcccaatgctatccctcccccctccccccaccccaccacagtccccagagtgtgatgttccccttcctgtgtccatgtgatctcattgttcaattcccacctatgagtgagaatatgcggtgtttggttttttgttcttgtgatagtttactgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcattgtattccatggtatatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaataatgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcatttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatccccacaccgacttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcgccattctaactggtgtgagatgatatctcatagtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtcgttcgcccactttttgatggggttgtttgtttttttcttgtaaa e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56807444 0 + 60714840 C e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=23180.000000 s hg38.chr19_GL949748v2_alt 951674 14 + 1064304 ttATTTTCTACCTA s panTro4.chr19 59885583 14 + 63644993 TTATTTTCTACCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807444 14 + 60714840 TTATTTTCTACCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324595 14 - 106955855 TTATTTTCTACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60625067 14 + 64156825 TTATTTTCAACCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765664 14 + 59248254 TTATTTTCGACCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870921 14 + 51301725 TTATTTTCGACCTG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e chlSab2.chr6 47579122 6 + 50890351 I a score=162032.000000 s hg38.chr19_GL949748v2_alt 951688 72 + 1064304 TTTCTATCGCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT s panTro4.chr19 59885597 72 + 63644993 TTTCTATCGCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807458 72 + 60714840 TTTCTATCCCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324609 72 - 106955855 TTTCTATCCCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGACTTAACTAATCCTAGATCAAAAAT i nomLeu3.chr10 C 0 M 692 s rheMac3.chr19 60625081 72 + 64156825 TTTCTATCCCTTTCAGGGATCGTACCGTTGGCCTGACATATCTGTGGATTTAACCAATCCCAGATCAAAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765678 72 + 59248254 TTTCTATCCCTTTCAGGGATCATACCGTTGGCCTGACATATCTGTGGATTTAACCAATCCCAGATCAAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870935 72 + 51301725 TTTCTATCCCTTTCAGGGATCGTACCGTTGGCCTGACATATCTGTGGATTTATACAATCCCAGATCAAAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579128 70 + 50890351 TTTCTGTCCCTTTCAGGGATCATACCATTGGCCTGATATATC--TGGATTTCACCAATCCCAGATCAAAAAT i chlSab2.chr6 I 6 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=343871.000000 s hg38.chr19_GL949748v2_alt 951760 225 + 1064304 AATGGGGGCAAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACTCttcttgagagaggatctcactctgtcacccaggctggaatttagcagcacgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagccgggattacaagcatgtcccaccatgcctggctga----tttt s panTro4.chr19 59885669 225 + 63644993 AATGGGGGCAAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACtcttcttgagagaggatctcactctgtcacccaggctggaatttagcggcacgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcggcctcccgagtagccgggattacaagcatgtcccaccacgcctggctga----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807530 225 + 60714840 AATGGGGGCGAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACTCttcttgagagaggatctcactctgtcgcccaggctggaatttagtggcacgatctcggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagccgggattacaagcatgtcccaccacgcctggctga----tttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625153 213 + 64156825 AATGGGGGCAAAGACAATTAAAAAT-----TACAATAAAATGCACATGAACTGTGGttattt---ctctcttgagagaggatctcgctctgtcacccaggctggggtgcagtggcatgatctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagccagaattacaagcacgtcccaccatgcctggctga-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765750 213 + 59248254 AATGGGGGCAAAGACAATTAAAAAT-----TACAATAAGATGCACATGAACTGTGGttattt---ctctcttgagagaggatctcgctctgtcacccaggctggggtgcagtggcatgatctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagccagaattacaagcacgtcccaccatgcctggctga-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871007 213 + 51301725 AATGGGCGCAAAGACAATTAAAAAT-----GACCATAAAATGCACATGAACTGTGGTCATTT---CTCTCTTGagagaggatcttgctctgtcacccaggctggggtgcagtggcatgatctcagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagccaggattacaggcacgtcccaccacgcctggctga-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579198 186 + 50890351 AATGGGGGCAAAGACAGTTAAAAAT-----TACAATAAAATGCACATGAACTGTGGTTATTT---CTCTCTTGAGAGAGGATCTCGCTCTGTCACCcag-------------------------------tgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccgagtagccagaattacaggcacgtcccaccatgcctggctgatttt---- i chlSab2.chr6 C 0 I 338 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M a score=1890.000000 s hg38.chr19_GL949748v2_alt 951985 13 + 1064304 ttttttttttttt- s panTro4.chr19 59885894 13 + 63644993 ttttttttttttt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807755 13 + 60714840 ttttttttttttt- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625366 5 + 64156825 ---------tttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765963 5 + 59248254 ---------tttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871220 5 + 51301725 ---------tttta i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M e chlSab2.chr6 47579384 338 + 50890351 I a score=189888.000000 s hg38.chr19_GL949748v2_alt 951998 114 + 1064304 ttt-------gtattctaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcgtgacctcatgatctgcccgcctcggcctcccaaagtgttgggattacaggcgtgag s panTro4.chr19 59885907 111 + 63644993 ----------gtattttaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcgtgacctcatgatctgcccgcctcggcctcccaaagtgttgggattacaggcgtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807768 121 + 60714840 tttttttttggtattttaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcctgacctcgtgatctgcccacctcggcatcccaaagtgttgggattacaggcgtgag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625371 112 + 64156825 ttt-------gtgttttaaatacagatggggtttcaccatgttagccaggatagtctc--tgtcctgacctcgtgatctgcctactttggcctcccaaaatgttgacattacaggcgtgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765968 112 + 59248254 ttt-------gtgttttaaatacagatggggtttcaccatgttagccaggatagtctc--tgtcctgacctcgtgatctgcctactttggcctcccaaaatgttgagattacaggcgtgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871225 114 + 51301725 ttt-------gtattttaaatagagatggggttttaccatgttagccaggatagtctcgatgtcctgacctcgtgatctgcccactttggcctcccaaaatgttgggattacaggcgtgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579722 112 + 50890351 ttt-------gtgttttaaatagagattgagtttcaccatgttagccaggatagtctc--tatcctgacctcgtgatctgcccgctttggcctcccaaaatgttgagatgacaggcgtgag i chlSab2.chr6 I 338 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M a score=578072.000000 s hg38.chr19_GL949748v2_alt 952112 272 + 1064304 ccaccgcacccagccAGCAAGTGCATTTAGAACTACTCT--ACTTTCTACCCCATAACt----------ttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtgcagcagcacaatctcagcttattgcaactcccg-ccccctgggttcaagtgtttctcctgcatcagcctcttgaatagctaggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgttggccaggctgg s panTro4.chr19 59886018 272 + 63644993 ccaccgcacccagccAGCAAGTGCATTTAGAACTACTCT--ACTTTCTACCCCATAACt----------ttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtgcagcagcacaatctcagcttattgcaactcccg-ctccctgggttcaagcgattctcctgcatcagcctcttgaatagctaggattatacaggcacctgccactgagcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgttggccaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807889 283 + 60714840 ccaccgcacccagccAGCAAGTGCATTTAAAACAACTCT--ACTTTCTACCCCATAACtttttttacacttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtacagtggcacaatctcagcttattgcaactcccacccccccgggttcaagcgattctcctgcatcagcctcttgaatagctagggttatacaggcacctgccactgcgcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgtcggccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325373 294 - 106955855 CCACTGCACCCAGCTAGCAAGTGCATTTAAAACAACTCTAAACTTTCTACCCCATAACt----------tttttttacgcttttttttttgtttgagacaagtctcactctgtcgcccaggatggagtgcagtggcacaatctcagcttattgcaactcccg-ccccccgggttcaagcgattctcctgcatcagcctcttgagtagctgggattatacaggcacctgccactgcgcctggctaaattttgtttttttgtgtttttttttttttgaga--gagtttcactcttgttgcccaggctgg i nomLeu3.chr10 M 692 I 48 s rheMac3.chr19 60625483 271 + 64156825 ccactgcacccagccAGCTAGTGCATTTAAAACAACTCT--ACTTTCTACCCCACAACT----------TTATTTTACA-Ctttttgtttgtttgagacgagtctcactctgtcgtacaggatggagtgcagtggcgcaatctcagttca--------tctg-ccccccgggttccagcgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766080 271 + 59248254 ccactgcacccagccAGCTAGTGCATTTAAAACAACTCT--ACTTTGTACCCCACAACT----------TTATTTTACA-Ctttttgtttgtttgagacgagtctcactctgtcgtgcaggatggagtgcagtggcacaatctcagttca--------tctg-ccccctgggttccagcgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871339 279 + 51301725 ccaccgcacccagccagctaGTGCATTTAAAACAACTCC--ACTTTCTACCCCATAAct----------ttattttaca-ctttttgtttgtttgaaacaagtctcactctgtcatgcaggatggagtgcggtggcgcaatctcagttcattgcaacctcca-ccccccgggttcaagcgattctcctgcatcggcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacaggatttcacta-tgttggacaggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579834 278 + 50890351 ccaccgcgcccagccAGCTAGTGCGTTTAAAACAACTCT--ACTTTGTACCCCACAACT----------TTATTTCACA-C-TTTGGtttgttggagacgagtctcactctgtcaagcaggatggagtgcagtggcgcaatctcagttcgttgcatcctccg-ccccccgggttcaagtgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaagttttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=27078.000000 s hg38.chr19_GL949748v2_alt 952384 15 + 1064304 tcttgaactcctgac s panTro4.chr19 59886290 15 + 63644993 tcttgaactcctgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808172 15 + 60714840 tcttgaaatcctgac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625754 15 + 64156825 tcttgaactcctgat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766351 15 + 59248254 tcttgaactcctgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871618 15 + 51301725 tcttgaactcctgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580112 15 + 50890351 tcttgaactcctgat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103325667 48 - 106955855 I a score=351887.000000 s hg38.chr19_GL949748v2_alt 952399 187 + 1064304 cacgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccgccatgcccagcTACACtttttttt------gaaacggggtctcgttttcttgctcaggctggagtacaatggggcaatcacagctcactgcagccttgacctcccagacttgagcaatcctaccactatggcctccca s panTro4.chr19 59886305 187 + 63644993 tatgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccaccatgcccagcTACACtttttttt------gaaacggggtctcattttcttgctcaggctggagtacaatggggcaatcacagctcactgcagccttgacctcccagacttgagcaatcctgccactatggcctccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808187 187 + 60714840 cacgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccactatgcccagctACACtttttttt------gaaacggggtctcattttcttcctcaggctggagtacaatggggcaatcacagctcactgcagcctcgacctcccagacttgagcaatcctgccactatagcctccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325715 162 - 106955855 caagcgattctcctgcctcagcctccctagtagctgggattataggcatgtgccaccacgcctggctaagtttgtatttttagtagagacggtgtttctccatgttggtcaggctg-------------------------------atctcgaactcccgacctcaggtgatccgcctgcctcggcctccca i nomLeu3.chr10 I 48 I 45 s rheMac3.chr19 60625769 185 + 64156825 tgtgtgatcaaaccgcctcagcctcccaatgtgttggaattacaggcgtgagccgcca--cCTGGCTATACTGtttttt------gaaacagggtctcgccttgtggctcaggctggagtacagtggggcaatcatagctcattgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766366 185 + 59248254 tgcgtgatcaaaccgcctcagtctcccaatgtgttggaattacaggcgtgagccgcca--cCTGGCTATACTGtttttt------gaaacagggtctcgctttgtggctcaggctggagtacagtggggcaatcatagctcattgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871633 185 + 51301725 tgcGTGATCAaaccgcctcagtctcccaatgtgttggaattacaggcgtgagccgcca--cctggctatactttttttt------gaaacggggtctcactttgtggctcaggctggagtacactggggcaatcacagctcactgcagcctcgacctcccagactcgaGCAATCCTGCCACCATAGCCTCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580127 185 + 50890351 tgcgtgatcaaaccgcctcagtctcccagtgtgttggaattacaggcgtgagccacca--cCTGGCTATACTGtttttt------gaaacggggtctcgctttgtggctcaggctggagtacagtggggcaatcacagctcactgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=29624.000000 s hg38.chr19_GL949748v2_alt 952586 26 + 1064304 ccacacctcgctcattcttgtatata s panTro4.chr19 59886492 26 + 63644993 ccacacctcgctcattcttgtatata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808374 26 + 60714840 ctacacctcactgattcttgtatttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625954 22 + 64156825 ccacacctcgctgatctttgta---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766551 22 + 59248254 ccacacctcgctgatctttgta---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871818 23 + 51301725 CCACGCCTCgctgatctttgtat--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580312 23 + 50890351 ccacacctcgctgatctttgtat--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103325877 45 - 106955855 I a score=267396.000000 s hg38.chr19_GL949748v2_alt 952612 133 + 1064304 tatatattttt-----gtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtgggctcaaccgatcctcctgccttggcttcccacagtcctgggatcagaaacatgagccacagtgcctggccA s panTro4.chr19 59886518 135 + 63644993 ttttttttttt---ttgtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtgggctcaaccgatcctcctgccttggcttcccacagtcctgggatcagaaacatgagccacagtgcctggccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808400 138 + 60714840 ttttttttttttttttgtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtaggctcaaccaatcctcctgccttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325922 129 - 106955855 tttgtatttta-----atagagatggggtttcattatgttggccaggctggtcttgaactcctgaccgtgtgatcaa----cccgcctcggcttcccaatgtgctggaattacaggtgtgagccaccatgtccagcTA i nomLeu3.chr10 I 45 I 1552 s rheMac3.chr19 60625976 129 + 64156825 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766573 129 + 59248254 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871841 129 + 51301725 ----ttttttt-----gtggagacagggtttcaccatgttgctgaggctggtctgaaactcctgtgGGCTCAGCtaatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580335 129 + 50890351 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=254955.000000 s hg38.chr19_GL949748v2_alt 952745 147 + 1064304 Gtgcagctttatttacagtaaccaagatatagagtcagtctaagtgaccatcagtggatgaataaaaaat---gtgcccgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagccttaAAAAGGAAACATGGTA s panTro4.chr19 59886653 147 + 63644993 Gtgcagctttatttacagtaaccaagatacagagtcagtctaagtgaccatcagtggatgaatagaaaat---gtgcccgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagccttaAaaaggaaacatggta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808538 147 + 60714840 Gtgcagctttatttacagtaaccaagatatagggtcagtctaagtgaccatcagtggatgaatagaaaat---gtgcctgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagcctcaAaaaggaaacatggta i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60626105 150 + 64156825 GTTcagctttatttactgttaccaagatacagagtcagtctaagtgaccatcactggataaatggaaaatgtggtgcccgttgggtacactgcctactgcctgggttacgagattattggg----accccaagcctcaAaaaggaaacatggta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766702 148 + 59248254 Gtgcagccttatttacagttaccaagatac--agtcagtctaagtgaccatcactggataaatggaaaatgtggtgcccgttgggtacactgcctactgcctgggttatgagattattggg----accccaagcctcaAaaaggaaacatggta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871970 148 + 51301725 gtgCAGCTTTATTTACAGTTACCAAGATAG--AGTCAGTCTAAGTGACCATCACTGGATGAATGGAAAATGTGGTGCCTGTTGGGTACACTGCCTACTGCCTGGGTTATGAGATTATTGGG----ACCCCAAGcctcaaaaaggaaatatggta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580464 154 + 50890351 GtgcagctttatttacagttaccaagatacagagtcagtctaagtaaccatcactggatgaatggaaaatgtggtgcctgttgggtacactgcctactgcctgggttatgagattattgggacccaccccaagcctcaAAAAGGAAACATGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103326051 1552 - 106955855 I a score=534334.000000 s hg38.chr19_GL949748v2_alt 952892 252 + 1064304 ggccgggcacagtggctcacgcctgtaatcacagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccctgtctctactaaaaata-taaaaaaatcagccgggcgtggtggcacactcctgtagtcccagctacttgggaggctgaggc-aggaggattgcttgaaccagagagtcagaggttgcagtgagccaagatcgtgccactgcgct s panTro4.chr19 59886800 250 + 63644993 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccgtgtctctactaaaaata-taaaaaaatcagccgggcgtggtggcacactcctgtagtgccagctacttgggaggctgaggc-aggaggattgcttgaaccagagagtcag--gttgcagtgagccaagatcgtgccaatgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808685 254 + 60714840 ggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccctgtctctactaaaaatatttaaaaaattagccgggtgtggtggcacactcctgtagtctcagctacttgggaggctgaggcaaggaggattgcttgaaccagggagtcagaggttgcagtgagccaagatcgtgccactgcact i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60626255 252 + 64156825 ggctgggcacggtggctcacgcctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagagcagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgagga-aagaggagtgctggaaccagggagttggaggttgcagtgagctgagattgtaccatttcact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766850 252 + 59248254 ggctgggcacggtggctcacgcctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagagcagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaggc-aagaggatcgctggaaccagggagttggaggttgcagtgagctgagattgtaccatttcact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872118 252 + 51301725 ggctgggcacggtggctcacacctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaata-caaaaaaattatccaggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggc-aggaggatcacttgaaccagagacttggaggttgcagtgagctgagactgcaccattgcact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580618 252 + 50890351 ggctggccacggtggctcaagcctgcaatcccatcacttcaggagaccaaggcgggtggatcacttgaggccaggagtttgagaccagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcacctgtagtcccagctacttgggaggctgaggc-aggaggatcgctggaaccagggagttggaggttgcagtgagctgagattgcaccgtttcact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935125 248 + 49145316 ggccaggcgcagtagctcacgcctgtaaccccagcactctgggaggccgaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaagatgttgaaaccccgtctctactaaaaata-c--aaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggc-aggagaatcacttgaacccgggaggcggaggctacagtgagctgagatcgtgtaactgcact i calJac3.chr22 I 796 C 0 e canFam3.chr1 20041887 933 - 122678785 I e nomLeu3.chr10 103326051 1552 - 106955855 I a score=112967.000000 s hg38.chr19_GL949748v2_alt 953144 42 + 1064304 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa s panTro4.chr19 59887050 42 + 63644993 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808939 42 + 60714840 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327603 42 - 106955855 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i nomLeu3.chr10 I 1552 C 0 s rheMac3.chr19 60626507 45 + 64156825 ccagcctgtgtgacggagcaagactcccactc--aaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767102 44 + 59248254 ccagcctgggtgacggagcaagactccctctc---aaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872370 42 + 51301725 --agcctgggtgacggagcaagactccctctc---aaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580870 47 + 50890351 ccagcctgggagacagagcgagactccctctcaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935373 44 + 49145316 ccagccttaatgacggagcaagactccatctc---aaaaaaaaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=817.000000 s hg38.chr19_GL949748v2_alt 953186 5 + 1064304 caaa--c s panTro4.chr19 59887092 4 + 63644993 aaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808981 5 + 60714840 aaaa--g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327645 7 - 106955855 aaaaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626552 4 + 64156825 aaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767146 4 + 59248254 aaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872412 4 + 51301725 aaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580917 4 + 50890351 aaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935417 0 + 49145316 C a score=139229.000000 s hg38.chr19_GL949748v2_alt 953191 63 + 1064304 aaaCATGGTATTAATTACACAAT-GGAATACTCCTCAACCTTAAGGAACTCCTATCTTTTTATT s panTro4.chr19 59887096 61 + 63644993 --acatggtattaattacacaat-ggaatactcctcaaccttaaggaaatcctatcttttTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808986 63 + 60714840 aaacatggtattaattacacaat-ggaatactcctcaaccttaaggaaatcctatcttttTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327652 63 - 106955855 aAACATGGTATTAATTACATAAT-GGAATACTCCTCAAACTTAAGGAAATCCTATCGTTTTATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626556 56 + 64156825 ----ttggtattaattacacaat-ggaatactcttcaaccttaaggaaatcctgtcttc---tg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767150 56 + 59248254 ----ttggtattaattacacaat-ggaatactcttcaaccttaaggaaatcctgtcttc---tg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872416 56 + 51301725 ----ttgatactaattacacaat-ggaatactcttcaaCCTTAAGGAAATcctctcttc---tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580921 57 + 50890351 ----TTGGTATTAATTACACAATGGGAATACTCTTCAACCTTAAGGAAATCCTGTCTTC---TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3210275 63 - 49145316 AAACATGGTATTATTTACACCAT-GAAATACTCTTCGATCTTAAGGAAATCCTATTCAAAAATA i calJac3.chr22 T 27878 n 0 e canFam3.chr1 20041887 933 - 122678785 I a score=55788.000000 s hg38.chr19_GL949748v2_alt 953254 19 + 1064304 TAAAAATTGCCAGTTTTAT s panTro4.chr19 59887157 19 + 63644993 TAAAAATTGCCAGTTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809049 19 + 60714840 TAAAAATTGCCAGTTTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327715 19 - 106955855 TAACAATTGCCAGTTTTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626612 19 + 64156825 taaaaaTTGCCAGTTTTAT i rheMac3.chr19 C 0 I 394 s macFas5.chr19 55767206 19 + 59248254 taaaaaTTGCCAGTTTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872472 19 + 51301725 taaaaattgccAGTTTTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580978 19 + 50890351 TAAAAATTGACAGTTTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935417 19 + 49145316 aaaaaaTTGCCGTTTTTAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=60650.000000 s hg38.chr19_GL949748v2_alt 953273 28 + 1064304 TTCAGCTAGAGATCACTTTTTAGCATAA s panTro4.chr19 59887176 28 + 63644993 TTCAGTTAGAGATCACTTTTTAGCATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809068 28 + 60714840 TTCAGCTAGAAATCACTTTTTAACATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327734 28 - 106955855 TTCAGCTAGAGATCACTTTTTAGCATAA i nomLeu3.chr10 C 0 I 304 s macFas5.chr19 55767225 28 + 59248254 TTCAGTTGGAGATCACTTCTTAGCATAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872491 28 + 51301725 TTCAGTTGGAGATCACTTCTTAGCATAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580997 28 + 50890351 TTCAGTTGGAGATCACCTCTTAGCATAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935436 28 + 49145316 TCCAGGTAGAGATCACTCCTTAGCGTAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e rheMac3.chr19 60626631 394 + 64156825 I a score=37777.000000 s hg38.chr19_GL949748v2_alt 953301 17 + 1064304 TGTTTCCTGTCTTTAAC s panTro4.chr19 59887204 17 + 63644993 TGTTTCCTGTCTTTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809096 17 + 60714840 TGTTTCCTGTCTTTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328066 17 - 106955855 TGTTTCCTGTCTTTAAC i nomLeu3.chr10 I 304 C 0 s macFas5.chr19 55767253 17 + 59248254 TATTTCCTATCTTTAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872519 17 + 51301725 TATTTCCTATCTTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581025 17 + 50890351 TATTTTCTATCTTTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935464 17 + 49145316 TGTTTCCTGTCTTTAAT i calJac3.chr22 C 0 I 9 e canFam3.chr1 20041887 933 - 122678785 I e rheMac3.chr19 60626631 394 + 64156825 I a score=23937.000000 s hg38.chr19_GL949748v2_alt 953318 13 + 1064304 -AATGGGTGAGGGT s panTro4.chr19 59887221 13 + 63644993 -GATGGGTGAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809113 13 + 60714840 -GATGGGTGAGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328083 13 - 106955855 -GATGGATGAGGGt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767270 14 + 59248254 GGATGGGTGAGGGt i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47872536 14 + 51301725 GGATGGgtgagggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581042 14 + 50890351 GGATGGGTGAGGGt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e rheMac3.chr19 60626631 394 + 64156825 I a score=1903.000000 s hg38.chr19_GL949748v2_alt 953331 18 + 1064304 -------tttttttttttttttttt s panTro4.chr19 59887234 12 + 63644993 -------tttttttttttt------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809126 14 + 60714840 -------TTTTTTGTTGTT----GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328096 12 - 106955855 -------ttgtttttttgg------ i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767598 18 + 59248254 ttttttcctttttttttt------- i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47872550 18 + 51301725 ttgttttttttttttttt------- i papAnu2.chr19 C 0 I 266 s chlSab2.chr6 47581056 17 + 50890351 -ttttggttttttttttt------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e rheMac3.chr19 60626631 394 + 64156825 I a score=2251.000000 s hg38.chr19_GL949748v2_alt 953349 13 + 1064304 ggtttggtttgga s panTro4.chr19 59887246 8 + 63644993 -----ggtttgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809140 13 + 60714840 TGTTTGGTTTGGA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e nomLeu3.chr10 103328108 0 - 106955855 C e chlSab2.chr6 47581073 0 + 50890351 C e papAnu2.chr19 47872568 266 + 51301725 I e macFas5.chr19 55767616 0 + 59248254 C e rheMac3.chr19 60626631 394 + 64156825 I a score=3273.000000 s hg38.chr19_GL949748v2_alt 953362 12 + 1064304 ttttggtttt--gc s panTro4.chr19 59887254 12 + 63644993 ttttggtttt--gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809153 12 + 60714840 TTTTGGTTTT--AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328108 11 - 106955855 -tttggtttt--gg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767616 6 + 59248254 ------tttttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872834 10 + 51301725 ttttggtttt---- i papAnu2.chr19 I 266 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e chlSab2.chr6 47581073 0 + 50890351 C e rheMac3.chr19 60626631 394 + 64156825 I a score=50103.000000 s hg38.chr19_GL949748v2_alt 953374 22 + 1064304 ttttgagtcgaagtttcactct s panTro4.chr19 59887266 22 + 63644993 ttttgagtcgaagtttcactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809165 22 + 60714840 TTTTGAGACAAAGTTTCACTCT i ponAbe2.chr19 C 0 I 756 s nomLeu3.chr10 103328119 22 - 106955855 ttttgagacgaagtttcactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627025 22 + 64156825 ttttgagacgaagtttcactct i rheMac3.chr19 I 394 C 0 s macFas5.chr19 55767622 22 + 59248254 ttttgagacgaagtttcactct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872844 21 + 51301725 -tttgagacgaagtttcactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581073 18 + 50890351 ----gagacgaagtttcactct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I a score=449109.000000 s hg38.chr19_GL949748v2_alt 953396 264 + 1064304 tgtctcccaggctagagtgcaatggcgcgatctcggctcactgtgacctcctcctcccaggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccatgcccgctaatttttgtattttagtagagacagggttttaccatgttgaccagactggtctcgaactcccgacctcaggt--------------gatctgcccacctcagcctcccagagtgctgggattacaggtgtgagcaaccatgcccggccA s panTro4.chr19 59887288 264 + 63644993 tgtctcccaggctagagtgcaatggcgcgatctcggctcactgtgacctcctcctctcaggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccatgcctgctaatttttgtattttagtagagacagggttttaccatgttgaccagactggtctcgaactcccgacctcaggt--------------gatctgcccacctcagcctcccagagtgttgggattacaggtgtgagcaaccatgcccggccA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103328141 264 - 106955855 tgtcgcccaggctagagtagaatggcacagtctcggctcactgcgacctcctcctcccgggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccacgcccgctaatttttgtattttagtagagacggggtttcaccatgttgaccagactggtctcgaactaccgacctcaggt--------------gatctgcccacctcggcctcccaaagtgttgggattacaggtgtgagcaaccacgccgggccG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627047 276 + 64156825 tgtcacccaggctagagtagaatgtcacggtctcggctcactgcaacctccgcctcccgggaaggagtggttctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767644 276 + 59248254 tgtcacccaggctagagtagaatgtcacagtctcggctcactgcaacctccgcctcccgggaaggagtggttctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872865 276 + 51301725 tagcgcccaggctagagtagaatgtcacggtctcggctcactgcaacctccgcctcccgggagggagcgattctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccacgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagccaccatgcccagccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581091 276 + 50890351 tgtcacccaggctagagtagaatggcatggtctcggctcactgcaacctctgcctcccgggagggagtgattctcttgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccaatctcgggtgatctgctcacctcgatctgcccacctcagcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56809187 756 + 60714840 I e calJac3.chr22 45935481 9 + 49145316 I a score=132655.000000 s hg38.chr19_GL949748v2_alt 953660 62 + 1064304 AGGGTTTTTAACTTTAGCTGACCTCCGGAGGTTACAAGTTTGAAAACGGCAGGAGGAAACCC s panTro4.chr19 59887552 62 + 63644993 AGGGTTTTTAACTTTAGCTGACCTCCGGAGGTTACAAGTTTGAAAACGGCAGGAGGAAACCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103328405 59 - 106955855 AGGGTTTTTAACTCTAGCTGGCCTCCGGAGGTTACAAGTTTGAAAA---CAGGAGGAAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627323 62 + 64156825 AGGGGTTTTACCTCTAGCTGGCCTCCGGATGTTACAAGTTTGAAAATAGAAGGAGGAAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767920 62 + 59248254 AGGGTTTTTACCTCTAGCTGGCCTCCGGATGTTACAAGTTTGAAAATAGAAGGAGGAAACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47873141 62 + 51301725 agggTTTTTACCTCTAGCTGGCCTCCGGAGTTTACAAGTTTGAAAATAGGAGAAGAAAACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581367 62 + 50890351 AGGGTTTTTACCTCTAGCTGGCCTCCAGAGGTTACAAGTTTGAAAATAGGAGGAGGAAACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935490 62 + 49145316 AGGGTTTTTAAGTCTAGCTGGCCTCCAGAGGTCACAAATTGGAAAATAGCAGGAGAAAACCC i calJac3.chr22 I 9 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56809187 756 + 60714840 I a score=2305838.000000 s hg38.chr19_GL949748v2_alt 953722 872 + 1064304 AGAGAGTTGTAAACTTACGAAGGTCTGGGCTC-TGAAAAAGATACAAATTTTCTTTCCATGCCAATAGCGCTCACACAGACATGGTGAATGTTCCTGAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGACAC---------AAGGCAAGGATTCTTGGTATGCCCAGGGGAAGTAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgccaagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggtcaggagtctgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagctgggca-tggtggtgtatgcctatagtcccagctactcaggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagattgtgc-----cactccagcctgggcaacagagtgacactctgtctc--------------aaaaaaaaaa------GATGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTCTTTTATGAAGGCAATAAAATCTTGAGCTTATGGTAAA-ATG-CAAAATTTT-------CCCCCCTTCTCCTTTTTCAGAAGCAGCTTTGAAATCCTTTAATAAAA-GGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTCGGGCCTTTGTTTT---- s panTro4.chr19 59887614 880 + 63644993 AGAGAGTTGTAAACTTACGAAGGTCTGGGCTC-TGAAAAAGATGCAAATTGTCTTTCCATGCCAATAGCGCTCACACGGACATGGTGAATGTTCCTGAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGAAAC---------AAGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTCATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGGAAAAAAGGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgctgagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggttaggagtctgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagccaggca-tggtggtgtatgcctgtagtcccagctactcaggaagctgaggcaggagaatcgcttgaacgtgggaggcagaggttgcagtgagccaagattgtgc-----cactccagcctgggcaatagattgacactctgtctc--------------aaaaaaaaaaaaaaaagaTGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTTTTTTATGAAGGCAATAAAATCTTGAGCTTATGGTAAA-ATG-CAAAATTTT------TCCCCCCTTCTCCTTTTTCAGAAGCAGCCTTGAAATCGTTTAATAAAA-GGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTCGGGCCTTTGTTTT---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809943 874 + 60714840 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTCTTAAAAAAAATGCAAATTTTCTTTCCATGCCGATAGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCAGCCCCACAAAGTGACAC---------AGGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCAGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTGAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGCCTATTAAAAGATACAAGCagccgagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagccaggca-tggtggtgtatgcctgtagtcccagctactcaggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcgtgc-----cactccagcctgggcaacagagtgacactctgtctc--------------aaaa------------GATGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTCTTTTATGAAGGCAATAAAATCTTGACCTTATGTTAAA-ATGCCAAAATTTTT-----TCCCCCCTTCTCCTTTTTCAGAAGCAGCTTTGAAATCGTTAAATAAAAGGGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATGCTGAGATTCTGGGGATCTCGGGCCTTTGTTTT---- i ponAbe2.chr19 I 756 C 0 s nomLeu3.chr10 103328464 873 - 106955855 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAAATTTTCTTTCCATGCCGATAGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCAGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGACAC---------AGGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTTCGGAAAAA-AGCTAAAAACTACAAAGAAGATTGTGCTAAGGCTCATTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgccgagcgtggtggcttacgcctgtaatcccaacactttgggaggccaaggtgggcgcggatcacaaggtcaggagtttgagaccagcctggccaaaatggtgaaaccctatctctactaaaaatacaaaacttagccgggcattggtggtgtatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggtagcagtgagccaagatcgagc-----cactccagcctgggtgacagagtgacactctgtctc--------------aaaaaaaaaaaa----GATGCAAGCATTTTGAACTGGAAGGAGGT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATC--------TTTTATGAAGGCAATAAAATCTTGAGCTTATGTT-AA-ATG-CAAAATTTT------TCCCCCCTT---CTTTTTCAGAAGCAGCTTTGAAATCGTTTAATAAAA-ACAAGCCTCTATCATTAGGTAAGTTACCTCATTTACAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTTGGGCCTTTGTTTT---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627385 858 + 64156825 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCACCGGACTTTCTGTAAGAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGCTT-TTGGTGTGCCCAGGGGAAGCAGTGTTACGCCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAATCTTCTGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCGTTGATCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCggccgggagcggtggctcatgcctgtaatcccagcattttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgcgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcacttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactccagcctgggtgacagagtgaga--ctatctc---------------aaaaaaaaaaaaaaaGCTGCAAGCATTTTGAACT--GAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCTC-------CCCTCCGTTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAC-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTATAACTTTTATTCTTCATG-TGAGA-TTTGAGGA-CTTGGGGCTTTGTTTT---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767982 861 + 59248254 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCACCGGACTTTCTGTAAGAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGCTT-TTGGTGTGCCCAGGGGAAGCAGTGTTACGCCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAATCTTCTGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCGTTGATCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCAgccgggagcggtggctcatgcctgtaatcccagcattttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgtgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcacttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactctagcctgggtgacagagtgaga--ctatctc--------------aaaaaaaaaaaaaaaaGCTGCAAGCATTTTGAACTGGGAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCTC-------CCCCCCGTTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAA-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTATGACTTTTATTCTTCATG-TGAGA-TTTGAGGA-CTTGGGGCTTTGTTTT---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47873203 880 + 51301725 AGAGAGTTGTAAACTTAAGAGGGTCGGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCAGACTTTCTGT--GAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGATT-TTGGTGTGCCTAGGGGAAGCAGTGTTATGGCAGGAAGCAGAGTGATTATGGTGGGCAGACTAAGCCAATTTTCTGGAAAAA-ggct-aaaactacaaagaagattGTGCTAAGGC---TCGAGTGCGTTGAGCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAgcggccaggagcggtggctcatgcctgtaatcccagcactttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgcgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcgcttgaacctgggagacagaggttgcagtaagccaagatcttgc-----cactccagcctgggtgacagagtgaga--ctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagatgcaagcaTTTTGAACTGGGAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAgtttatattaaa-atg-caaatctcccccccaccccccgttTTCCTTTTTCAGAGGCAGCTTTGaaatcatttaataaaa-acaagCCTTTATCATTAGGTAAGTTA-CTCATTTACGACTTTTATTCTTCATG-TGAGA-TTTGGGGA-CTTGGGGGTTTGTTTT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581429 855 + 50890351 AGAGAGTTGGAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACGTGGTGAATGTTCCTAAACCCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCGCCATCCCCACAGAGTGACAC---------AGGGCAAGGATT-TTGGTATGCCCAGGGGAAGCAGTGTTAGGGCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAGTTTTCTGGAAAAA-GGCT-AAAACTACA---AAGATTGTGCTAAGGC---TC--GTGCGTTGAGCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCggccaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggtgg--acggatcacgaggtcaggagtttgagaccagcctggccaaaacggtgaaaccccatctgtactaaaaatacaaaacttagccacgca-tggtggtgcatgcctgtagtcccagctactcaggaggctgaggcagcagaatcgcttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactctagcctgggtgaca----gaga--ctgtctc--------------aaaaaaaaaaaaaaaaGATGCAAGCATTTTAAAATGGGAGGAGAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGCAATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCCCCCC----CCCCCCATTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAA-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTACGACTTTTATTCTTCATG-TGAGA-TTTGGGGA-GTTGGGGCTTTGTTTT---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935552 906 + 49145316 AGAGAGTCGTACACTTACGAGGGGCTGGGCTC-TTAAAAAGATGCAGATTTTCTTTCCGGGCCAATAGTGCCCATGCAAACACAGTGAATGTTCCCAAAAGCCACCAGACTTTCTGTAAGAAGTGTGGCAAGCAGCAATCCCACGAAATGGCACAGTACGAGAAGGGCAGGGATTCTC--TATGCCCAGGGAAAGCGGTGTTACGACAGACAGCAGAGTGGCTATAGTGGGCAGCGTACGCCGATTTTCCGAAAAAA-GGCT-AAAAATACA---AAGACTGTGCTAAGGT---TTGGCTGCGTGGAGCCCCACTGCAGATCTAAGAGAATGCTGGCTGTTAAAAGATGCAAGCggccgggcgcggtggctcacgcctgtaatcccagcactttaggaggccgaggcgg--gtggatcgcgaggtcaggagttcaagaccagcctggccaagatgttgaaaccccgtctctactaaaaatacaaaaattagctgggcg-cggtggcatgtgcccgtaatcctacctactcaggaggctgaggcaggagaattgcctgaacctgggaggtggaggttacagtgagctgagattgtgccattgcactccagcctgggtgactgagtaagactcggtctc-------aaaaaaaaaaaaaaaaaaaaaaagaTGCAAGCATTTTCAACTGGGAGCAGGTAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTGAGTGTCATCTTTTATTTTATTATGAAGACAATAAAATCTTGCGTTTCTTTTAAACATG-TAAATTT--------CTCCCCCTTTTTCTTTTTCAGAAGCAGCTTTGAGATCATTTAATAAAA-ACAAGCCTCTACCATTAGGTAAATTACCTCATTGACAACTATTATTCTTCATG-TGAGG-TTTGGGGA-CTGAGGGCTGCTtttttttt i calJac3.chr22 C 0 I 2503 e canFam3.chr1 20041887 933 - 122678785 I a score=49894.000000 s hg38.chr19_GL949748v2_alt 954594 29 + 1064304 AAGGAGAATG--TGCTGAGCACTAAGAATGC s panTro4.chr19 59888494 29 + 63644993 AAGGAGAATG--TGCTGAGCACTAAGAATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56810817 29 + 60714840 AAGGAGAATG--TGCCGAGCACTAAGAATGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329337 29 - 106955855 AAGGAGAATG--TGCTGAGCACTAAGAATGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60628243 29 + 64156825 AAGAAGAGGC--TGCTGACTACTAAGAATGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55768843 29 + 59248254 AAGAAGAGGC--TGCTGACTACTAAGAATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874083 31 + 51301725 AAGAAGAGACTGTGCTGACTACTAAGAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582284 31 + 50890351 AAGAAGAGACAGTGCTGTCTACTAAGAATGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45936458 2503 + 49145316 I a score=864378.000000 s hg38.chr19_GL949748v2_alt 954623 302 + 1064304 AAAGAAATGCCGGACTTAGCATCCCTGCTCCCAGGGCGGAGCTGGTCTCGCAGGTGCGTAGCAGTAAGACCTGGGAAGCTGAAACACGATCGCGTTTGTTGGAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGGTAGAGAC-ttttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacctctacctcctgggttcaagcagttctcctgcctcagcctctagaatagctgggatta s panTro4.chr19 59888523 302 + 63644993 AAAGAAATGCCGGACTTAGCATCCCTGCTCCCAGGGCGGAGCTGGTCACACAGGTGCGTAGCAGTAAGACCTGGGAAGCTGAAACACGATCGCGTTTGTTGGAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC-ttttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacttccacctcctgggttcaagcagttctcctgcctcagccttgggaatagctgggatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56810846 301 + 60714840 AAAGAAATGCCGGACTTCGCATCCCTTCTCCCAGGGCGGACCTGGTCACGCAGGTGCATAGCAGTAAGACCTGGGAAGCTGAAACACGATAGCGTTTGTTGAAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC--tttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacctccacctcccgggttcaagcagttctcctgcctcagcctctggagtagctgggatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329366 302 - 106955855 AAAGAAGTGCCGGACTTCGCACCCCTGCTTCCAGGGCGGAGCTGGTCATGCAGGTGCATAGCAGTAAGACCTGGGAAGCTGAAACACGATAGCGTTTGTTGGAAATCTATAAATACATACAAAGCAGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC-TTTGGttttttgagatggaggcttgctctgtcgcctaggctgaagtgcagtgatatgacctcggctgactgcaacctccacctcccgggttcaagcagttctcctgcttcagcctctggagtagctgggatta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60628272 300 + 64156825 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGCATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAAGTGGATAAGCTAGAGAC---ttcttttttgagatggagccttgctctgtcgcctaggctggagtgcagtggcacaatctcagctgactgcaacctccgcctcccggcttcaagcaattctcctgcctcagcctctggagtagctgggatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55768872 300 + 59248254 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGCATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAAGTGGATAAGCTAGAGAC---ttcttttttgagatggagccttgctctgtcgcctaggctggagtgcagtggcacaatctcagctgactgcaacctccgcctcccagcttcaagcaattctcctgcctcagcctctggagtagctgggatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874114 302 + 51301725 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGGTAGCATTTGTTGGAaatctataaatacatacaaagtgGGGAAGGGTAAGCTTGGCCTTTGAAACTGGATAAGCtagagac-ttttcttttttgagatggagtcttgctctgtcgcctaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctctggagtagctgggatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582315 302 + 50890351 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGATGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGTATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAACTGGATAAGCTAGAGAC-ttttcttttttgagatggagtcttgctctgtcacctaggctaaagtgcagtggcacaatctcggctcactgcaacctccgcctcccgggttcaagcagttctcctgcctcagcctctggagtagctgggatta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45938961 303 + 49145316 aaagaaaTCCCAGCGTTCTCATCCCTGCTCCCAGGGAGGAGCTGGTTATGCAGGTGGAGAGCAGTAAGACCTGGGAAGCTGAAACACGATAGTATTTGTTGGAAACTGGTACATACATACCCAGTAGGGAAGGATAAGCTTGGCCTTTCAATATGGATAAGCTAGAGACtttttcttttttgagatggagtctggctctgttgcctaggctggagtgcagtggtgcaatcatggttcactgcagccttgacctcccaggctcaggtgatcctcctgcctcagcctcccaaagtgctggggtca i calJac3.chr22 I 2503 I 1 e canFam3.chr1 20041887 933 - 122678785 I a score=301963.000000 s hg38.chr19_GL949748v2_alt 954925 136 + 1064304 caggtacctgccaccaggcccggctaattttttgtggtgtt----------tgtagagatggggtttcaccatgatggccaggctggtcttgaactcctgacctcaagtgatctgcccacctcagcgtcccaaaatgctgggatta s panTro4.chr19 59888825 135 + 63644993 caggtgcctgccaccaggcccggctaattttttgtggtttt----------tgtagagatggggtttcaccatgatggccaggctggtcttgaactc-tgacttcaagtgatctgcccacctcagcgtcccaaaatgctgggatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56811147 136 + 60714840 caggtgcctgccaccaggcccggctaattttttgtggtttt----------tgtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatctgcccacctcagtgtcccaaaatgctgggatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329668 134 - 106955855 cgggtgccggtcaccaggcctggctaattttttgtggtttt----------tgtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatctgccca-ctcagtgtccc-aaatgctgagatta i nomLeu3.chr10 C 0 T 64436 s rheMac3.chr19 60628572 146 + 64156825 caggcacccaccaccaggcctggctagatttttgtggtttttatagagatgtatagagatggggtttcactatgttggccgggctggtcttgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769172 146 + 59248254 caggcacccaccaccaggcctggctagatttttgtggtttttatagagatgtatagagatggggtttcactatgttggccgggctggtcttgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874416 136 + 51301725 caggcacccaccaccaggcctggctagatttttgtggtttt----------tatagagatggggtttcactatgttggccaggctggtcttgaactcctaacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582617 136 + 50890351 caggcacccaccaccaggcctggctagatttttgtggtttt----------tatagagatgaggtttcactatgttggccaggctggtcttgaactcctaacctcaagtgatctgcccacctcagcctcccaaaatgttggaattg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939264 1 + 49145316 I a score=334363.000000 s hg38.chr19_GL949748v2_alt 955061 237 + 1064304 tgggc----atgagccaccacCACACCCGGttttgttttttttttttttttttttttt-----------ttttttttttttttgaaacagggcttcactctgtcacttaggctggagtg-----gtgcaatcatggttcactgcagccttgacctcccaagctctggtgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccatgcctggctaatttttttcactttttgtagagacag s panTro4.chr19 59888960 224 + 63644993 taggc----atgagcaaccaccacacccggcttt------------------tttttt-----------ttttttttttttttgaaacagggcttcactctgtcacttaggctggagtgcagtggtacaatcatggttcactgcagccttgacctcccaagctctggttatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccatgcctggctaatttttttcactttttgtagagacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56811283 221 + 60714840 taggc----gtgagtcaccCCCACACCTGAC---------------------tttttt-----------ttgttttgttttttgaaacagggcttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccttgacctcccaggctctggtgatcctcctgcctcagcctcctgagtagctgggaccacaggcacctgccatcacgcctggctaatttttttcactttttgtagagacag i ponAbe2.chr19 C 0 T 90216 s rheMac3.chr19 60628718 213 + 64156825 taggtgtgagtgagtta---ccacacctggc---------------------ttttct-------------------gtttttgaaacgggacttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccctgaccacccaggcttaggcaatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccacccctcctggctaa-ttttttcactttttgtagagacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769318 212 + 59248254 taggtgtgagTGAGTTA---CCACACCTGGC---------------------tttttt--------------------tttttgaaacgggacttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccctgaccacccaggcttaggcaatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccccacctggctaa-ttttttcactttttgtagagacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874552 211 + 51301725 caggc----gtgagtca---ccacacctggc---------------------cttttt-----------------ttttttttgaaacaggactttgctctgtcacttaggctggagtgcagtggtgcaatcacggctcactgcagccttgaccacccaggcttaggcgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccccgcctggctaa-ttttttcactttttgtagaaacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582753 229 + 50890351 caggg----atgagtca---ccacacctggT---------------------TGtttttttttttttttttttttttttttttgaaacaggacttcgctctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccttgaccacccaggcttaagcgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccacctggcctggctaatttttttcactttttgtagagacag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939264 1 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=111518.000000 s hg38.chr19_GL949748v2_alt 955298 85 + 1064304 ggtcttgctatgttgcccaggctggcctcgaattactaaactcaatcagtcctcctgcctcaccctcccaaactgctggggtaca s panTro4.chr19 59889184 85 + 63644993 ggtcttgctatgttgcccaggctggtctcgaattactaaactcaatcagtcctcccgcctcaccctcccaaactgctggggtatg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60628931 85 + 64156825 ggtcttgctatgttgcccaggctggtcttgaattactaaacttaatcagtcctcccaccttatcctcccaaagtgctggggtaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769530 85 + 59248254 ggtcttgctatgttgcccaggctggtctcgaattactaaacttaatcagtcctcccaccttatcctcccaaagtgctggggtaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874763 85 + 51301725 ggtcttgctatgttgtccaggctggtctcgaattactaagctcaatcagtcctcccacctcatcctcccaaagtgctggggtaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582982 85 + 50890351 ggtcttgctatgttgcccaggctggtctcgaattactaaacttaatcagtcctcccacctcatcctcccaaagtgctggggtaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939264 1 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=93204.000000 s hg38.chr19_GL949748v2_alt 955383 49 + 1064304 ggtgtgagccatgacacctggccCTTACCAGCTACTTATATCCTGAAGA s panTro4.chr19 59889269 49 + 63644993 ggtgtgagccatgacacctggccCTTACCAGCTACTTATATCCTGAAGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629016 49 + 64156825 ggtgtgagccatgacacctggccCTTACCAGCTATTTATATCCTGAAGA i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55769615 49 + 59248254 ggtgtgagccatgacacctggccCTTACCAGCTATTTATATCCTGAAGA i macFas5.chr19 C 0 I 337 s papAnu2.chr19 47874848 49 + 51301725 ggtgtgagccatgacacCTGGCCCTTACCAGCTACTTATatcctgaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47583067 49 + 50890351 ggtgtgagccatgacccctggcTCTTACCAGCTATTTACATCCTGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45939265 49 + 49145316 ggtgtgagccatgacacctggcCCTTACCAACTATTTATATCCTGAAGA i calJac3.chr22 I 1 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T a score=1336.000000 s hg38.chr19_GL949748v2_alt 955432 2 + 1064304 tt s panTro4.chr19 59889318 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55770001 2 + 59248254 tt i macFas5.chr19 I 337 I 4 s chlSab2.chr6 47583116 2 + 50890351 tt i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45939314 1 + 49145316 -t i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e papAnu2.chr19 47874897 0 + 51301725 C e rheMac3.chr19 60629065 2 + 64156825 I a score=16526.000000 s hg38.chr19_GL949748v2_alt 955434 27 + 1064304 attattattttttttttttttgagata s panTro4.chr19 59889320 25 + 63644993 tttttt--tttttttttttttgagata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629067 25 + 64156825 tttttt--ttttttttttttggagacg i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55770007 25 + 59248254 tttatt--tttttttttttttgagacg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47874897 18 + 51301725 ---------ttttttttttttgagata i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45939315 20 + 49145316 -------ttttgtttgtttttgagaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I a score=98946.000000 s hg38.chr19_GL949748v2_alt 955461 169 + 1064304 gagtctctct------ctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagt-agctgggactacaggcgcccaccaccacgcctggctaattttttt-gtgtttttagtagagacgg s panTro4.chr19 59889345 170 + 63644993 gagtctcaat------ctgtcacccaggctggagtgcagtggcgcgatcccggctcactgcaagctccgcctcccgggttcacgtcattctcctgcctcagcctcccgagt-agctgggactacaggcgcccaccaccacgcccggctaattttttttgtgtttttagtagagacgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629092 168 + 64156825 gagtctcgct------ctgtagcccaggctgcagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcagcctccggagt-agctgggactacaggcgcctgccacctcacccggctattttttgt-at-ttcttagtagagacgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770032 173 + 59248254 gagtctcgctctgtcactgtagcccaggctgcagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcagcctccggagt-agctgggactacagg-ggctgccacctcgcccagctattttttgt-at-ttcttagtagagacgg i macFas5.chr19 C 0 C 0 s calJac3.chr22 45939335 167 + 49145316 gggtcttgct------ctgttgccctggcttgattgcggtggcaagatcatagttcattacagcctcaaccttccaggctccggtgatcatccgacctcagcctccctttcgaactgggact-cagttgtgcactgccatacctgactaatatttgt-a--tttttggtagagacag i calJac3.chr22 C 0 I 715 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I e papAnu2.chr19 47874915 0 + 51301725 C a score=53878.000000 s hg38.chr19_GL949748v2_alt 955630 120 + 1064304 ggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccCCTGAAGA----TTGTG---- s panTro4.chr19 59889515 120 + 63644993 ggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccagagtgctgggattacaggcgtgagccaccgcgcccagccCCTGAAGA----TTGTG---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629260 122 + 64156825 ggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcT------GAttttttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770205 118 + 59248254 ggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccgcccatctcggcctcctaaagtgctgggattacaggcttgagccaccgcgcccggcc------GA----ttttttttt i macFas5.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I e papAnu2.chr19 47874915 0 + 51301725 C a score=9370.000000 s hg38.chr19_GL949748v2_alt 955750 10 + 1064304 ttttgagatg s panTro4.chr19 59889635 10 + 63644993 ttttgagatg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629382 10 + 64156825 ttttgagatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770323 10 + 59248254 ttttgagatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47583122 10 + 50890351 ttttgagatg i chlSab2.chr6 I 4 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e papAnu2.chr19 47874915 0 + 51301725 C a score=368992.000000 s hg38.chr19_GL949748v2_alt 955760 292 + 1064304 gggtcttgctgtgttgctccggcttgattgcagtggcacagtcatagctcattgcagcctcaaccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgcactgccacacctgactaatatttgtatttttggtagggacagtttcactatgttgccagatatggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccaaagtgctgggattacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttttttt s panTro4.chr19 59889645 283 + 63644993 gggtcttgctatgttgctccggcttgattgcagtggtgcagtcatagctcattgcagcctcaaccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgcactgccacacctgactaatatttgtatttttggtagggacagtttcactatgttg---------gtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccaaagtgctgggattacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttttttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629392 292 + 64156825 ggttcttgctctgttgccctggcttgattgcggtggcacaatcatagctcattgcagcctcaaccttccaggcttcagagatccttttacctcagactcctgagtagctggaactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatacggtgtcaaactcctggtgtcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttatttt i rheMac3.chr19 C 0 T 77969 s macFas5.chr19 55770333 292 + 59248254 ggttcttgctctgttgccctggcttgattgcggtggcacaatcatagctcattgcatcctcaaccttccaggcttcagagatccttttacctcagactcctgagtagctggaactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatacggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttatttt i macFas5.chr19 C 0 I 30 s papAnu2.chr19 47874915 317 + 51301725 ggatcttgctctgttgccctggcttgattgtggtggcacaatcatagctcattgcagcctcagccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatatggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccatgaagacttttattttt----ttagtattatttttatttttatttt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47583132 321 + 50890351 ggatcttgctctgttgccctggcttgattgcggtggcacaatcatagttcattgcagcctcaaccttccaggctccagagatcctcttacctcagactcctgagtagctggaactacaggtgtgctctgccacacccgactaatacgtgtatttttggtggggacagtttcactctgttgccagatacagtgtcaaactcttggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGACtttttattttattattattattatttttatttttatttt i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=218958.000000 s hg38.chr19_GL949748v2_alt 956052 299 + 1064304 t-ggacaaagtctcactctgttgcccaggatggaatgcagtggcatgatctcagctcactgcaacctctgacctccgcctccc-ggttcaagtgattctcttgcctcagcctcccgagtagctgggattataggtgtctgccaccaagcccagctaatttttgtaattttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcgtgatccacgtgcctcagcctcccaaagtgttgggattacaggtgtgagtcactgcgcctggtcTCATGAAGACCtt s panTro4.chr19 59889928 300 + 63644993 ttggacaaagtctcactctgttgcccaggatggaatgcagtggcatgatctcagctcactgcaacctctgacctccgcctccc-agttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggtgtctgccaccaagcccagctaatttttgtaattttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcgtgatccgcgtgcctcagcctcccaaagtgttgggattacgggtgtgagtcactgcgcctggtcTCATGAAGACCtt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55770655 272 + 59248254 -ttgacaaagtcttactcttttgcccaggatggaattcagtggcatgatcttggctcactgtaac--ctgacctccgcctcccgggttcaagcgattctcttgccgcagcctccagagcagctgggattacaggcacccgccaccacacccagcta--------------------------atttcaccatgtttgtcaggctggtctcaaactcctgacctcgtgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgcccagccTCATGAAGACCtt i macFas5.chr19 I 30 C 0 s papAnu2.chr19 47875234 298 + 51301725 -ttgac--agtctcacgctgtcacccaggatggaatgcagtggcatgatcttggctcactgtaacctctgacctccgcctcccgggttcaaaagattctcttgCCATAGCCTccggagtagatgggattacaagcacccgccaccacgtctggctaatttttgtaattttagtagagacaggatttcaccatgttcgtcaggctagtctcgaactcctgacctcgtgatccacctgcctcagtctcccaaagtgctgggattataggtgtgagccactgtgcccggcctcgtGAAgacctt i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47583455 296 + 50890351 -ttgacaaagtct----cttttgcccaggatggaatgcagtggcatgatcttggctcactgtaacctctgacctccgcctcctgggttcaagcgattctcttgccgcagcctccggagtagctgggattacaggcacccaccaccacacccggctaatttttgtaattttagtagagacaggagttcaccatgttcgtcaggctggtcttgaactcctgacctcatgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgcccagccTCATGAAGACCtt i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e rheMac3.chr19 60629684 77969 + 64156825 T a score=940392.000000 s hg38.chr19_GL949748v2_alt 956351 442 + 1064304 ttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtacaatct-------cactgcagcctccgcctcccaggttcaagtga-ttctcctgccttagcctcccaagtagctgggattacaggcgcctaccaccacgtctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactgctgacctcaaatgaactgtctgcctcagcctcacaaagtactgggattacaggcatgagccacctcacctggTGGTGAAGACTCTAAAGGCTCTTCTCAGATCAGCCTTTGTCCTGAATTTCACATGCCCGTGTCCAGTTCCCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCACCTCTTCATTATCCAGGGTTAAGCTGCAGATATTGTTATTAGGATTCCACCttgttct s panTro4.chr19 59890228 439 + 63644993 ttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtacaatct-------cactgcagcctccgcctcccaggttcaagtga-ttctcctgccttagcctcccgagtagctgggattacaggcgcctaccaccacgtctggctaatttttgtatt---agtagagacagcgtttcaccatgttggccaggctggtctcaaactgctgacctcaaatgaactgtctgcctcagcctcacaaagtactgggattacaggcatgagccacctcacctggTGGTGAAGACTCTAAAGGCTCTTCTCAGATCAGCCTTTGTCCTGAAGTTCACATGCCCGTGTCCAGTTCCCTCCCCAGCATCTTTTCAGGAGTTCCATGGTCTCGCCTCTTCATTATCCAGGGTTAAGCTGCAGATATTGTTATTAGGATTCCACCttgttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721288 449 + 60714840 ttttgagacagaatctcgttctgttgcccagggtggagtgcagtggtgcaatctctcctcacactgcaacctccccctcccaggttgaagaaa-ttctcatgcatcagcctcctaagtaactgggaccacaggcgtgcaccactgcaccaggctactttttgtatttttagtagagatggggttttgccatgttgcccaggctagtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaaagtgctgggattacaggcgtgagccaccTGGTCTGGtggtgaagactctaaaggctcttctcagaccagcctttgtcctgaatttcacatgcccgtgttcagttgcctccccagcatctTTTCAGGAGTTCCACAGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGATATTCTTATTAGGATTCCACCTTGTTCT i ponAbe2.chr19 T 90216 I 99025 s nomLeu3.chr10 103265366 423 - 106955855 ttttgagacagaatctcgttctgttgcccaggctggagtgcagtggtgcaatctctgctcacactgcaacctccacctcccaggttgaagcaa-ttctcatgcatcagcctcctaagtaactgggaccagaggcgtgcaccaccgcaccaggctactttgtgtatttttagtagagacggagttttgccatgttgcccaggctcgtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaaagtgctgggattacaggcgtgagccaccTCACGTGGtggtgaagactctaaaggctcttctcagaccagcctttgtcctgaagttcacatgcctgtgtccagttgcctccccagcatctTTTCAGGAGTTCCACGGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGATA-------------------------- i nomLeu3.chr10 T 64436 C 0 s rheMac3.chr19 60551715 449 + 64156825 ttttgagacagaatctcgttctgtcgcccaggctggagtgcagtggcacaatctctgttcacactgcaccctccacctcccaggttgaagcaa-ttctcgtgcgtcggcctcctaagtaactgggaccacaggcgtgcaccaccgcaccaggctactttttgtatttttagtagagatggggttttgccatgtcgcccaggctagtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaccgtgctgggattacaggcgtgagccaccacgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGGTCACATGCCCGTGTCCAGTTACCTCTCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTGAGCTACAGATATTCTGATTAGGATTCCACCTAGTTCT i rheMac3.chr19 T 77969 I 78069 s macFas5.chr19 55770927 435 + 59248254 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccgcctcccagattcaagagatttctcctgcctcagtctccctagtagctgggattacaggtgcctaccaccacgcctggctaattttcgtattttcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgagctcaagtgatctgtctgcctcagcctcacaacgtgctgggattacaggcgtgagccaccacgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGGTCACATGCCCGTGTCCAGCTGCCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAGCTCCAGAT------ATTAGGATTCCACCttgttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875532 434 + 51301725 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccacctcccaggttcaagaga-ttctcctgcctcagtctccctaggagctgggattacaggcgcctaccaccacgcctggctaattttcgtattttcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgagctcaagtgatctgtctgcctcggcctcacaacgtgctgggattacaggcgtgagccaccgcgcctggtggtGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTTCTGAGGGTCACATGCCCGTGTCCAGCTGCCTCCCCAACATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGAT------ATTAGGATTccaccttgttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47583751 433 + 50890351 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccgcctcccaggttcaagagatttctcctgcctca-tctccctagtagctgggattacaggtgcctaccaccacgcctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgtctgcctcagcctcacaaagtgctgggattacaggcatgagccacctcgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGTTCACATGCCCGTGTCCAGTTACCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAACTGCAAAT------GTTAGGATTCCACCttgttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939502 715 + 49145316 I a score=620.000000 s hg38.chr19_GL949748v2_alt 956793 5 + 1064304 -ctctc s panTro4.chr19 59890667 4 + 63644993 -cttt- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55771362 4 + 59248254 -tttt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875966 5 + 51301725 ttttt- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47584184 5 + 50890351 ttttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103265789 0 - 106955855 C e rheMac3.chr19 60552164 78069 + 64156825 I a score=215144.000000 s hg38.chr19_GL949748v2_alt 956798 141 + 1064304 tttttttttttttttttgatacggagtctcgcttgctcttttg-ccaggctgaagtgcagtggagcgatcttggctcactgcaatctccgcctcctgggttcaagcaattcccttgcctcagcctcgcaagtagctgggact s panTro4.chr19 59890671 140 + 63644993 -ttttttttttttttttgagacggagtctcgcttgctcttttg-ccaggctgaagtgcagtggagcgatcttggctcactgcaatctccgcctcctgggttcaagcaattcccctgcctcagcctcgcaagtagctgggact i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265789 133 - 106955855 --ttcttttctttttttgagac--agtctc----gctctgtcgcccaggctggagtgcagtggcgcagtctcggctcactgcaacctccatctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggac- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630233 141 + 64156825 ttttttcttttttttttgagattgagtctcacttgctttgttg-ccaggctggagcgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggact i rheMac3.chr19 I 78069 I 8 s macFas5.chr19 55771366 140 + 59248254 ttttttcttttttttttgagattgagtctcacttgctttgttg-ccaggctggagcgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggac- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875974 141 + 51301725 tttttttttttttttttgagatggagtctcacttgctttgttg-ccaggctggaacgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcagttcccctgcctcagcctcccaagtacctgggact i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47584189 136 + 50890351 ttgttttttttttttttgagatggagtctc----gctttgttg-ccaggctggagctcagtggcgcaatcttggctcactgcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggac- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=4871.000000 s hg38.chr19_GL949748v2_alt 956939 10 + 1064304 tacaggtaac s panTro4.chr19 59890811 10 + 63644993 tacaggtaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265922 9 - 106955855 tacaggt-gc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55771506 9 + 59248254 tacagtt-gg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876115 8 + 51301725 -acagtt-gc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584325 9 + 50890351 tacagtt-gc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e rheMac3.chr19 60630374 8 + 64156825 I a score=233999.000000 s hg38.chr19_GL949748v2_alt 956949 140 + 1064304 acaccaccatgcccggctaattttttg---ttttagtagagacggggcttcaccatgttggccgggatggtctcgatctcctgac-ctcatgatccgcctgccttggcctcccaaagtgttggg-ttacaggcatgagccaccat s panTro4.chr19 59890821 141 + 63644993 acaccaccatgcccggctaattttttg---ttctagtggagacggggcttcaccatgttggccaggatggtctcgatctcctgac-ctcatgatccgcctgcctcggcctcccaaagtgttgggattacaggcgtgagccaccat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265931 144 - 106955855 ccgccaccacgcccagctaattttttgtatttttagtagagacagtgtttcaccgtgttatccaggatggtctcgatcttctgac-ctcaggatctacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgT i nomLeu3.chr10 C 0 I 66588 s rheMac3.chr19 60630382 143 + 64156825 gcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaatctcctgac-ttaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55771515 143 + 59248254 gcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaatctcctgac-ttaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876123 143 + 51301725 tcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaagctcctgac-ttaatgatccacctgcgtcggcctcccaaagtgttgggattacaggcgtgagccacccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584334 144 + 50890351 tcaccaccatgcccggctaattttttgtg-ttttagtagagatagggcatcaccctattggccaggatggtctcaatctcctgacactaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=6141.000000 s hg38.chr19_GL949748v2_alt 957089 6 + 1064304 gcccgg s panTro4.chr19 59890962 6 + 63644993 gcccgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60630525 6 + 64156825 acccga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771658 6 + 59248254 acccga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876266 6 + 51301725 acccga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584478 6 + 50890351 acccaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103266075 66588 - 106955855 I a score=353475.000000 s hg38.chr19_GL949748v2_alt 957095 201 + 1064304 cTGATTCCACCTTGTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGGGTTAGGCCTggcaggcagatcacctgaggttgggagttcgagaccagcctgaccaacgtagagaaaccctgtctgtactaaaaatacaaaattagccaggtatggtggcacattcctgtaatcccagcta s panTro4.chr19 59890968 201 + 63644993 cTGATTCCACCTTGTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGGGTTAGGCCCggcaggcagatcacctgaggttgggagttcaagaccagcctgagcaacgtggagaaaccctgtctgtactaaaaatacaaaattagccaggtatggtggcgcattcctgtaatcccagcta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103332663 201 - 106955855 CTGATTCCACCTTCTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATTTACCTCATCAGAAACTAGGGAGTTAGGCCCggcaggcagatcacctgaggttgggagttcgagaccagcctgaccaacatggagaaaccctgtgtgtactaaaaatacaaaattcgccaggtatggtggcgcatgccggtaatcccagcta i nomLeu3.chr10 I 66588 C 0 s rheMac3.chr19 60630531 201 + 64156825 cTGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcagacagataacctgaggttgggagcttgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcccatgaccctcgtcccagcta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771664 201 + 59248254 cTGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcagacagataacctgaggttgggagcttgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcccatgaccgtcgtcccagcta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876272 201 + 51301725 cTGATTCCACCTTGTACTTATATTCTGTCCcagttcattttaaatttatctacCTCATCAGAAACTAGGGAGTTAGGCCCCGCAGacagataacctgaggttgggagctcgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcgcatgcccgtcgtcccagcta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584484 201 + 50890351 ccGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATGTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcaggcagataacctgaggttgggagctcgagaccagcctgacaaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcgcatgcccgtcgtcccagcta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=114166.000000 s hg38.chr19_GL949748v2_alt 957296 53 + 1064304 ctccggaggccgaggcaggagaatcacttgaacccaggaggcggagg--ttgcag s panTro4.chr19 59891169 53 + 63644993 ctcgggaggccgaggcaggagaatcacttgaaaccaggaggctgagg--ttgcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103332864 53 - 106955855 ctcgggaggctgaggcaggagaatcacttgaacccaggaggcagagg--ttgcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630732 53 + 64156825 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771865 53 + 59248254 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876473 53 + 51301725 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584685 53 + 50890351 ctcaggagactgaggcaggagaatcacttgaacccaggaggcagagg--ttgcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940217 53 + 49145316 ctcaggaggctgaggcaggagagaagcttgaacccaggagatggagggatcgt-- i calJac3.chr22 I 715 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I a score=253887.000000 s hg38.chr19_GL949748v2_alt 957349 140 + 1064304 tgagc-cgacatcacaccatt-gcattccag-cctgggcaacaagagcaaaactacatctcaaaaaaaaa-------------------------gaaaaaCTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGGCCTTATGCGTGAGTA----GTTtgtgtg-------tgtgtgtgtg s panTro4.chr19 59891222 142 + 63644993 tgagc-cgagatcgcaccatt-gcattccag-cctgggcaacaagagcaaaactacgtctcaaaaaaaaaa-----------------------agaaaaaCTAGGCAGTTAATCTTCAAAGCCTTT-CCAGTGGCCTCATGCATGAGGG----gtgtgtgtg-------tgtgtgtgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56820762 141 + 60714840 tgagc-cgagatcgcaccattggcactccagccctgggcaacaagagcaaaactacatctcaaaaaaaaa-------------------------gaaaaTCTAGGCAGTTAATCCTCAAAGCCTTTCCCAGTGG-CTTATGCATGAgt-----gtgtgtgtg-------tgtgtctgtg i ponAbe2.chr19 I 99025 I 126 s nomLeu3.chr10 103332917 143 - 106955855 ggagc-agagatcgcaccatt-gcactccag-cctgggcaacaagagtgaaactacctctcaaaaaaaa--------------------------gaaaaaCTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGGCCTTATGCGTGAGTACTCtgtgtgtgtg-------tgtgtgtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630785 123 + 64156825 tgagc-cgagatcgcgccact-gcactccag-cccgggcaacaagagcgaaactccgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----CTGTGTGTG----------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771918 123 + 59248254 tgagc-cgagatcgcgccact-gcactccag-cccgggcaacaagagtgaaactccgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----Ctgtgtgtg----------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876526 130 + 51301725 tgagc-cgagatcgcgccact-gcactccag-cccgggcgacaagagcgaaactccgtctcaa--------------------------------gaaaaattaGGCAGTTAATCCTCAAAGCCGTT-CCAGTGACCTTATGCGTGAGTA----CTGTGAGTACTGTGCG---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584738 123 + 50890351 tgagc-cgagattgcgccact-gcactccag-cccgggcaacaagagcgaaactctgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----Ctgtgtgtg----------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940270 145 + 49145316 tgagcaagttattgtaccgag-gcacatcag-cttacgaaacacagacgaaagtctatctcaagacaaatatagggaaataaaaaTCGATAAGTAAAGAAAGTAGGGAGCTAATCCTCAAAGCCTTT-CCAAGCA-TTTATGTGTGAGT------------------------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=30663.000000 s hg38.chr19_GL949748v2_alt 957489 27 + 1064304 tgtgtg-----------------------------------tgtgtgtgtgtgtgt--------CTTTCA s panTro4.chr19 59891364 35 + 63644993 tgtgtg-----------------------------------tgtgtgtgtgtgtgtgtgtgtgtCTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821029 27 + 60714840 tgtgtg-----------------------------------tctgtgtgtgtgtgt--------TTTTCA i ponAbe2.chr19 I 126 C 0 s nomLeu3.chr10 103333060 27 - 106955855 tgtgtg-----------------------------------tgtgtgtgtgtgtgt--------CTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630908 21 + 64156825 -----------------------------------------TGTCTGTGTGTCTGT--------TTTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772041 21 + 59248254 -----------------------------------------tgtctgtgtgtctgt--------TTTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876656 62 + 51301725 TGAGTACTGTGAGCCGTTCCAGTGACCTTATGCGTGagtactgtgtgtgtgtctgt--------ttttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584861 21 + 50890351 -----------------------------------------tgtctgtgtgtctgt--------TTTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940415 19 + 49145316 -------------------------------------------CCTGCGGTAATGT--------GTTTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=83355.000000 s hg38.chr19_GL949748v2_alt 957516 39 + 1064304 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCAGAA s panTro4.chr19 59891399 39 + 63644993 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821056 39 + 60714840 CACCATGTGTTCTGAACTACTAAGGAA--TTCTC--------ACCAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333087 39 - 106955855 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCAGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630929 37 + 64156825 CGCCTTGAGTTCTGAACT--TTTAGAA--TTCAC--------ACCAGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772062 37 + 59248254 CGCCTTGAGTTCTGAACT--TTTAGAA--TTCAC--------ACCAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876718 37 + 51301725 cGCCTTGAGTTCTGAACT--TTTAGAA--TTCGC--------ACCAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584882 37 + 50890351 CACCTTGAGTTCTGAACT--TTTAGAA--TTCGT--------ACCAGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940434 41 + 49145316 CCCCATGAGATATGAAATCAATAGGAGTCTTCTC--------ACCAGAA i calJac3.chr22 C 0 I 328 s canFam3.chr1 20042820 47 - 122678785 CACTGTGTGTTCTCAACTACACAGGAA--GCAACCATAGGAAGCCAGAA i canFam3.chr1 I 933 I 1 a score=80680.000000 s hg38.chr19_GL949748v2_alt 957555 28 + 1064304 AGGCACATAAACCTGGGATCATGGCCTA s panTro4.chr19 59891438 28 + 63644993 AGGCACGTAAACCTGGGATCATGGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821095 28 + 60714840 AGGCACGTAAACCTGGGATCATGGCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333126 28 - 106955855 AGGCACGTAAACCTGGGATCATGGCCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630966 28 + 64156825 AGGCACCTAAACCTGGGATCATGGCCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772099 28 + 59248254 AGGCACCTAAACCTGGGATCATGGCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876755 28 + 51301725 AGGCACCTAAACCTGGGATCATGGCCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584919 28 + 50890351 AGGCACCTAAACCTGGGATCATGGCCTA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20042868 28 - 122678785 AGACATGTAAGCCTGAGATAGTAACTTG i canFam3.chr1 I 1 C 0 e calJac3.chr22 45940475 328 + 49145316 I a score=965021.000000 s hg38.chr19_GL949748v2_alt 957583 327 + 1064304 ATGTACTTTCACTTTTACATCCAGTACCTTATCAACGTCCTTTTTAG-------------TACCTAATCTAGGCTTCACTACTGAGACTCAGGGGTCCAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGC-CGCCC--TTTTTCTCCAGGGATAACACGG---AAAGAACGACCA---CCTCTAGACGTGGACGAAATGCTGGAGCGCTTCAAAACAGAAGCACAAGGTGGGTGTCAGGACCTCCAATGTTGGAGTCAGCTGA-GGAAGC-CCCCCGTTCTTGCTGCTATCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- s panTro4.chr19 59891466 327 + 63644993 ATGTACTTTCACTTTTACATCCAGTACCTTGTCAACGTCCTTTTTAG-------------TACCTAATCTAGGCTTCACTACCGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAACGC-CCCCC--TTTTTCTTCAGGGATAACAAGG---AAAGAACGACCA---CCTCTAGACGTGGACGAAATGCTGGAGCGCCTCAAGACAGAAGCACTAGGTGGGTGTCAGGACCTCCAGTGTTGGAGTCAGCTGA-GGAAGC-CGCCCATTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAGTCTTT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821123 342 + 60714840 ATGTACTTTCACTTTTACATCCAGTACCTTGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTAATCTAGACTTAACTATTGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGCGCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAACAACCA---CCTCTAGACGTGGAGGAAATGCTGGAGCACTTCAAAGCAGAAGCACTAGGTGGGTGTCAGGACCTCCGATGTTGGAGTCAGCTGAGGGAAGC-CGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333154 342 - 106955855 ATGTACTTTCACTTTTACATCCAGTACCTTGTCCACATTCTTTTTAGTAATCTAGTAAATTACCTAATCTAGGTTTAACTATTGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGTCCCCCC--TTTTTCTTCAGGGGTAACACGG---AAAGAACGACCA---CCTCTAGACCTGGAGGAAATGCTGGAACGCTTCAAAGCAGAAGCACTAGGTGGGTGTCAGGACCTCCGACGCTGGAGTCAGCCAAGGGAAGC-CGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630994 341 + 64156825 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTTGGCTTAACTATTGAGACTCAGTGGTC-CACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGCCCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCAATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCTGTCTCTTTCCGATCTTT-- i rheMac3.chr19 C 0 I 307 s macFas5.chr19 55772127 341 + 59248254 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTAGGCTTAACTATTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGCCCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCCGCTTTCT--------CCTGTTCCTTTTAAGAACCCCGTCTCTTTCCGATCTT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876783 342 + 51301725 ATGTACTTGCACTTTTACATCCAGTACCTCGCCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTAGGCTTAACTATTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGccccccc--TTTTTCTTCAGGGATAACACGG---AAAGAAAGAGAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCTGTCTCTTTCCGATCTTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584947 342 + 50890351 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTAATCTAGGCTTAACTACTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAACGCCCCTCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTATAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCCGTCTCTTTCCAATCTTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940803 347 + 49145316 ACATACTTCCATTTTTATATCCAGTACCTTGTCAACATCGACTGTCCTAAGCTAGTAAATTAGCTAATCTAGGCGTAAGTATTGAGACTCAGTGGTTGCATTTGAGCCAGCCTGGAGTCCC--------------------ACGGCCAGCACAGCCACAGGCCTGTAGTGTCCCCTCTATTTTTTTTCAGAGACAATACGG---AAAGGAGAACCAGAGCCTGTAGACCTGGATGAAATGCTGGTGCACTTCAAGGCAGAAGCACAAGGTGGGTGTTAGGACCTCCGACGTCAGAGTCCGCTGAGGGAAGC-TGCCCTCTCCTGCCGCTTTCT--------CCTGTTCCTCTGGAGAACCCCAACTCTCCCCAATCTCA-- i calJac3.chr22 I 328 I 2 s canFam3.chr1 20042896 354 - 122678785 ACACATTTTAA-TTTTATCTCTAAGATCAGGTTAATGTCCTTTTTATGTAACTGG---------------GGGTTTAAGTA-TGAGACCCAGTTGTC-AACATGCGCATTCTTGAAGTCCTCTCTCCTAGGCAGAAGTTTAAGTACTGACATAGTTACAGGACTATAATG--CCTCC--TCTTTTCTCAGGGATCACCAGGACTACAGAACTAAAA---TGTGCAAACCTGGAAGAACCCCCAGAGCATGTAGAAGAAAAAGATTCAGGTTGGTCTTAGAACACCCAGAGTTGGAACAAGCCAAGCGACACATACCCCACCATGTTGTGTTCTCTCCACCCCCTTTCCTTTCTGGGAGCTCCATTTC--CCCAACCTCATT i canFam3.chr1 C 0 C 0 a score=220421.000000 s hg38.chr19_GL949748v2_alt 957910 73 + 1064304 TCCTCCACTATTCTTAATGTGCCCACTGTCTCCTGGAGAATGCCAACCTCCCTTCCGTAAGAATAGAGGGAAG s panTro4.chr19 59891793 73 + 63644993 TTCTCCACTATTCTTAATGTGCCCACTGTCTTCTGGAGAATGCCAACCTCCCTTCCATAAGAATAGAGGGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821465 69 + 60714840 TTCTCCACTATTCTTAATGTGCCCACTGTCTCCTGGAGAATGCCAACCTC----CCATAAGAATAGAGGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333496 73 - 106955855 CTCTCCACTCTTCTTAATTTGCCCACTGTCTCCCGGAGAATGCCAACCTCCCTTCCATAAGAATAGAGGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631642 73 + 64156825 TCCTCCACTATTCTTAATCTGCCCACTGTCTCCTAGAGAATTCCAACCTCCCTTCCCTAAGAATAACGGGAAG i rheMac3.chr19 I 307 C 0 s macFas5.chr19 55772468 73 + 59248254 TCCTCCACTATTCTTAATCTGCCCACTGTCTCCTAGAGAATTCCAACCTCCCTTCCGTAAGCATAGCGGGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47877125 73 + 51301725 TCCTCCACTATTCTTAATCTGCCTACTGTCTCCTGGAGAATTCCAACCTCCCTTCCATAAGCATAGCGGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585289 73 + 50890351 TTCTCCACTATTCTTAATCTGCCTACTGTCTCCTGGAGAATTCCAACCTCCCTTCCGTAAGAATGGCGGGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45941152 73 + 49145316 TTCTCCACTATTTTTAATTTGCCTACTGTCTACTGGAGAATGCCAAACTCCCTTCCATAAGAATAGAGGAAAg i calJac3.chr22 I 2 I 398 s canFam3.chr1 20043250 72 - 122678785 TTCTCCACTACTAATAGT-TATCAGTTGTCTCAGAGGAAATGCCTTCCTCCCTCACTTAACAACAAAGTGAGG i canFam3.chr1 C 0 C 0 a score=20214.000000 s hg38.chr19_GL949748v2_alt 957983 9 + 1064304 AACGAACGT s panTro4.chr19 59891866 9 + 63644993 AACGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821534 9 + 60714840 AACGAACGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333569 9 - 106955855 AACGAACGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631715 9 + 64156825 AACAAACGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772541 9 + 59248254 AACAAATGT i macFas5.chr19 C 0 I 368 s papAnu2.chr19 47877198 9 + 51301725 AACAAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585362 9 + 50890351 AACAAATGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20043322 9 - 122678785 AATGACCAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45941225 398 + 49145316 I a score=102825.000000 s hg38.chr19_GL949748v2_alt 957992 78 + 1064304 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACAGCGCAGAG--AGtttttg--tttttgtttttg-ttttgaga s panTro4.chr19 59891875 72 + 63644993 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGATGCAGAG--AGtttttg--tttttgtttt-------gaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821543 72 + 60714840 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGGTGCAGAG--AGtttttg--tttttgtttt-------gaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333578 79 - 106955855 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGGTGCAAAG--AGttcttg--tttttgtttttgtttttgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631724 66 + 64156825 TGCGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCATGGTGCAG-------Gtttg--tttttgtttt-------gaga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47877207 66 + 51301725 TGCGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCGTGGTgcag-------ttttg--tttatgtttt-------gaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585371 66 + 50890351 TGTGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCATGGTGCAG-------ttttg--tttttgtttt-------gaga i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20043331 79 - 122678785 TGAAGAGAACTGGAATTCTTTCAGTTCACGGAAAATT-GGTGTACTGTATGGAGTTACTCTTTAATTTTTCAATTT-------CAGA i canFam3.chr1 C 0 I 1335 e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I a score=75913.000000 s hg38.chr19_GL949748v2_alt 958070 50 + 1064304 cag----tttctctgttggccaggttggaatgcaatggcgcgatctcggctcac s panTro4.chr19 59891947 50 + 63644993 cag----tttctctgttggccaggctggaatgcaatggcgcgatctcggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821615 50 + 60714840 cag----tttctctgttgcccaggctggaatgcaatggcgagatctcggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333657 54 - 106955855 cggagtctcgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631790 52 + 64156825 tggag--tttctctgtcgcccaggctggaatgcagtggcgcgatctcagctcac i rheMac3.chr19 C 0 M 226 s papAnu2.chr19 47877273 52 + 51301725 tggag--tttctccgtcgcccaggctggaatgcagtggtgcgatctctgctcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585437 52 + 50890351 tggag--tttctctgttgcccaggctggaatacagtggtgcgatctctgctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I a score=125908.000000 s hg38.chr19_GL949748v2_alt 958120 117 + 1064304 tgtaacctccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagctgggattataggcacctgccaccacacccagctaattttttttttttttttt s panTro4.chr19 59891997 117 + 63644993 tgtaacctccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagcggggattataggcacctgccaccacacccagctaattttttttttttttttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56821665 117 + 60714840 tgtaacttccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagccaggattataggcacctgccaccacacccaactaattttttttttttttttt i ponAbe2.chr19 C 0 I 9 s nomLeu3.chr10 103333711 108 - 106955855 tgcaagctccgcctcccgggttcacgc---------cattctcctgcctcagcctctccgagtagctgggactacaggcgcccgccaccacg-ccggctaattttttttttgtatttt i nomLeu3.chr10 C 0 I 5 s papAnu2.chr19 47877325 114 + 51301725 tgcaacctccacctcccaggttcaagcaattctcctgaccctcctgcctcagcctc-ctgagtagctgggattgcaggtgcctgccaccacacccagctaatttttttttttttt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585489 114 + 50890351 tgcaacctccacctcccaggttcaagcgattctcctgactctcctgcctcagcctc-ctgagtagctgggattgcaggtgcctgccaccacacccagctaatttttttttttttt--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I e rheMac3.chr19 60631842 226 + 64156825 M a score=187842.000000 s hg38.chr19_GL949748v2_alt 958237 132 + 1064304 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctccgcctcccagattcaag---------tgattgtcctgtctcagcctcctgagtagctgggactacaggtgcat s panTro4.chr19 59892116 132 + 63644993 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatcccttttcactgcaacctccgcctcccagattcaag---------tgattgtcctgtctcagcctcctgagtagctgggactacaggtgcat i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56821791 132 + 60714840 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctccgcctcccagattcaag---------tgattgtcctgcctcagcctcctgagtagctgggactacaggtgcat i ponAbe2.chr19 I 9 C 0 s nomLeu3.chr10 103333824 251 - 106955855 gagacagggtttcaccgtggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaagcgtgagccaccacacccggcctttgtttttgttttgagacagtttctctgtcgcccaagctggaatgcaatggcacgatctcggctcactgtaacctccacctcccaggtccaagcaattctcctgattctcctgactcagccgcctgagtagccggga-tataggcgcct i nomLeu3.chr10 I 5 C 0 s macFas5.chr19 55772918 132 + 59248254 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagtacagtggtatcatccctgttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcagcctcccaagtagctgggattataggtgcac i macFas5.chr19 I 368 C 0 s papAnu2.chr19 47877439 132 + 51301725 gagatgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagtacagtggtatcatccctgttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcagcctcccaagtagctgggattacaggtgcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585603 132 + 50890351 gagatgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagttcagtggtatcatccctcttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcaacctcccaagtagctgggattacaggtgcat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60631842 226 + 64156825 M a score=176858.000000 s hg38.chr19_GL949748v2_alt 958369 102 + 1064304 gccaccacgcccagctaatt-----tttttttgtacttttagtagagacaggtttcaccatctcattcagggtgg------------------------tctcaaactcctgacctcaaga-----------gatctgct--cc s panTro4.chr19 59892248 99 + 63644993 gccaccacgcccagctaatt-----tttttt-gtacttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctc--ga-----------gatctgcc--cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821923 102 + 60714840 gccaccacgcccagctaatt-----tttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tcttgaactcctgacctcaaga-----------gatctgca--cc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103334075 135 - 106955855 gccaccacacccagcTAACt-----ttttttttttttttttg-agacaaagtcttgttcttgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctctgcctcccagattgaagtgattgtcctgcc--t- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632068 105 + 64156825 gccaccaagcccagctaattttttctttttttatatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcc---- i rheMac3.chr19 M 226 C 0 s macFas5.chr19 55773050 105 + 59248254 gccaccaagcccagctaattttttctttttttatatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcaaactcctgacctcaaga-----------gatctgcc---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47877571 107 + 51301725 gccaccaagcccagctaattttttctttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcccc-- i papAnu2.chr19 C 0 M 318 s chlSab2.chr6 47585735 105 + 50890351 gccaccaagcccagctaattttttctttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcc---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=210.000000 s hg38.chr19_GL949748v2_alt 958471 8 + 1064304 acccaccc s panTro4.chr19 59892347 2 + 63644993 ------cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822025 2 + 60714840 ------cc i ponAbe2.chr19 C 0 I 2 s rheMac3.chr19 60632173 3 + 64156825 -----ccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773155 3 + 59248254 -----ccc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585840 3 + 50890351 -----ccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103334210 0 - 106955855 C e papAnu2.chr19 47877678 318 + 51301725 M a score=49644.000000 s hg38.chr19_GL949748v2_alt 958479 50 + 1064304 ccaagtctcccgaagtgctgggattacaggcgagagccaccgtacccggc s panTro4.chr19 59892349 50 + 63644993 cccagtctcccaaagtgctgggattacaggcgtgagccaccgtacccggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103334210 48 - 106955855 --cagcctcctgagtagctgggactacaggtgcatgccaccacgcccagc i nomLeu3.chr10 C 0 M 880 s rheMac3.chr19 60632176 50 + 64156825 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773158 50 + 59248254 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585843 50 + 50890351 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47877678 318 + 51301725 M a score=165380.000000 s hg38.chr19_GL949748v2_alt 958529 200 + 1064304 cTTCTTTAAATTATTTAAAAGTTGACAGGTggccaggtgtggtggctctcacctataatctcccagcactttgggaggctgaggcgggtggatca--------agagatcgagaccatcctggccaacatggtgaaaccc-aactctactaaaaacacaaaaattagccgggtgtggtggcacccgcctgtagtcccagctactcagga s panTro4.chr19 59892399 209 + 63644993 cTTCTTTAAATTATTTAAAAGTTGACTGGTggccaggtgtggtggctcacacctataatctcccagcactttgggaggctgaagcgggtggatcacgagatcaagagatcgagaccgtcctggccaacatggcgaaaccccaactctactaaaaacacaaaaattagccgggtatggtggcacccgcctgtagtcccagctactcagga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60632226 209 + 64156825 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacacctgtaatctcccagcactttgggaggctgaggcgggtgggtcgtgagttcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgtgtacctgtagtcccagctactcagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773208 209 + 59248254 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacacctgtaatctcccagcactttgggaggctgaggcgggtggatcgtgagttcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgtgtacctgtagtcccagctactcagaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585893 207 + 50890351 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacgcctgtaatctcccagcactttgggaggctgaggcgggtggatcgtgagttc--gagattgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgcgtaccggtagtcccagctactcagaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103334258 880 - 106955855 M e papAnu2.chr19 47877678 318 + 51301725 M a score=247646.000000 s hg38.chr19_GL949748v2_alt 958729 223 + 1064304 ggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctggcaacagtgcgagactccatctt-aaaaaaaaaaaaaaaaaa--TTGACAGGCATAAATGTATTTATGGTACATTGCTCAGACAACTTTAATATAAACAACTTACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG s panTro4.chr19 59892608 225 + 63644993 ggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctggcaacagtgcgagactccatctt-aaaaaaaaaaaaaaaaaaaaTTGACAGGCATAAATGTATTTATGGTACATTGCTCAGACAACTTTAATATAAACAACTTACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103335158 220 - 106955855 ggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagatcgtgccactgcactccagcctggcaacagcgtgagactccatctc-aaaaaaaaaaaaaaa-----TTGACAGGCATAAATGTATTTATGGTACATTGTTCAGACAACTTTAATATAAACAACTCACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG i nomLeu3.chr10 M 880 C 0 s rheMac3.chr19 60632435 205 + 64156825 ggctgaggcaggagaatcccttgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggtgatagagcgagactccgtctcaaaaaaaaa------------TTGACAGGTATAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC----AGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773417 204 + 59248254 ggctgaggcaggagaatcccttgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggtgatagagcgagactccgtctc-aaaaaaaa------------TTGACAGGTATAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC----AGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47586100 206 + 50890351 ggctgaggcaggagaatcccctgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggcaatagagcgagactctgtctc-aaaaaaaa------------TTGACAGGTGTAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC--AGAGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47877678 318 + 51301725 M a score=415354.000000 s hg38.chr19_GL949748v2_alt 958952 267 + 1064304 ACTTTGTGAT-AGG-ttttttctg-----------ttttttttgtttttgaaatagagtctcactctgtcatgcaggctggagtgcagtggccccatcttggctcactgcaatctctgcctcctgggttc-aaggggtcttcctgccacagcctccccaggtgctgggacta-taggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagatggggtttcaacagggtagccaggttggtctagaactcctgacctcaagtgatccacctac s panTro4.chr19 59892833 266 + 63644993 ACTTTGTGAT-AGG-ttttttctg-----------ttttttt-gtttttgaaatagagtctcactctgtcgtgcaggctggagtgcagtggcccgatcttggctcactgcaatctctgcctcccgggttc-aagggatcttcctgccacagcctccccaggtgctgggacta-taggtgcccaccac--tatgcctggctaactgttgtgtttttagtacagatggggtttcaccagggtagccaggttggtctggaactccttacttcaagtgatccacctac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103335378 260 - 106955855 ACTTTGTGAT-AGGtttttttctg-----------ttttttttgtttttgaaatagagtctca--ctgtcacgcaggctggagtgcagtggcccgatcttggctcactgcaatctctgcctcctgggttc-aagggatcttcctgccatagcctccccaggtgctgggactg-taggtgcccaccactatatgcctggcta--------gtttttagtacagatggggtttcgccagggtagccaggttggtctggagctcctgacctcaagtgatccacctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632640 266 + 64156825 ACTTTGTGATCAGG-ttttttctg--gg-----------tttttttctggaaatggagtctcactgtgtcacgcaggctggagtccagtggctcgatctcggctcactgcaatctctgcctcccaggttctaagggatgtttctgccgcagcctccccaggtactgggactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773621 266 + 59248254 ACTTTGTGATCAGG-ttttttctg--gg-----------tttttttctggaaatggagtctcactgtgtcatgcaggctggagtccagtggctcgatctcggctcactgcaatctctgcctcccaggttctaagggatgtttctgccgcagcctccccaggtactgggactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878000 272 + 51301725 aCTTTGTGATCAGg-ttttttctgttgg-------tttttttttttctcaaaatggagtctcactgtgtcacgcaggctggagtccagtggcttgatctcggctcactgcaatctctgcctcccaggttctaaggGATGTTTCTGCCGCAGCCTCCCCAGGTACTGGGACTagtaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtcTCCCCAGGgtagccaggttggtctggaactcctaacctcaagtaatctgcctac i papAnu2.chr19 M 318 C 0 s chlSab2.chr6 47586306 277 + 50890351 ACTTTGTGATCAGG-TTttttctg--ttttttttttttttttttttctcaaaacggagtctcactgtgtcacgcaggctggagtccagtagcttgatctcggctcactgcaatctctgcctgctaggttctaagggatgtttctgccgcagcctccccaggtacgggaactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I a score=401953.000000 s hg38.chr19_GL949748v2_alt 959219 183 + 1064304 ctcggtctcctaaagtgctgggattacagctgtgaaccaccgcacctagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACATTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagttttgcccttgtcgcccaggctagagtgcaatggtgtgatctcggctc s panTro4.chr19 59893099 183 + 63644993 ctcggtctcctaaagtgctgggattacagctgtgaaccaccgcacctagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagttttgcccttgtcgcccaggctagagtgcaatggtgtgatctcggctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822029 183 + 60714840 ctcagtctcccaaagtgctgggattacaggtgtgaaccaccgcacccagccTGTGATAAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagtttcgcccttgttgcccaggctggagtgcaatggtgtgatctcggctc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 103335638 183 - 106955855 ctcggtctcccaaagtgctgggattacaggtgtgaaccaccacacccagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagtttcacccttgtcgcccaggctggagtgcagaggtgtcatcttggctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632906 180 + 64156825 ctgggtctcccaaagtgctaggattgcgggtgggagctaccacacccagccTGCGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcgcccaggctggagtgcactggcgtgatcttggctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773887 180 + 59248254 ctgggtctcccaaagtgctaggattacaggtgggagctaccacacccagccTGCGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcgcccaggctggagtgcaatggcgtgatcttggctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878272 180 + 51301725 ctgggtctcccaaagcgctaggattcgAGGTgggagctaccacacccagcctgtgatCAGTTTAAGATCAGCCTTGCTTACTTTCACGTTCCCTTTTATCTTCCTggtagcatttttgttttgtctt----cagaGTTTCTcccttgtcgcccaggccggagtgcaatggcgtgatcttggctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586583 180 + 50890351 ctgggtctcccaaagtgctaggattacaggtgtgagctaccacacccagccTGTGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcacccaggctggagtgcaatggcgtgatcttggctc i chlSab2.chr6 C 0 I 2936 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=491456.000000 s hg38.chr19_GL949748v2_alt 959402 232 + 1064304 gccacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttgttagttttatttttagtag--acagggtttcaccatgttgggcaggctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgc-tgggattacaggcatgagccaccgtacctag s panTro4.chr19 59893282 228 + 63644993 gccacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcctgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttgtt----ttatttttagtag--acagggtttcaccatgttgggcaggctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgc-tgggattacaggcatgagccaccgtacctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822212 231 + 60714840 accacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttttta---gtatttttagtagacacagagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgc-tggaattacaggcatgagccaccgtacctag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103335821 235 - 106955855 accacaacctccacctcccaggttcaagtgatt---ctgccgcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------attttttagttttatttttagtagacgcagggtttcaccatgttggccaggctggtcttgaactcctgagctcaggtgatccacccccctcggcctcccaaagcgcttgggattacaggcgtgagccaccgtgcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633086 230 + 64156825 accacaacctccacctcccagattcaagcgattcttctgcctcagcctcccaagtagctgggattataggcgcccaccaccacaactgactaa-------------------------------------------ttttttttttttttttttgtgtagacatagggtctcaccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774067 273 + 59248254 accacaacctccacctcccagattcaagcgattctcctgcctcagcctcccaagtagctgggattataggcgcccaccaccacatctggctaattttttttttcttttttttttttttcttctttttcttttttttttttttttttttttttttttgtagacatagggtctcgccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878452 250 + 51301725 accacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggattataggtgcccaccaccacatctggctaagttttttttctttttctttt-----------------------tctttttttttttttttttagtagacatagggtctcgccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589699 239 + 50890351 accacaatctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggattataggcgcccaccaccacatctggctaattttttttt----------------------------------tttttttttttttttttttagtagacatagggtctcgccatgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i chlSab2.chr6 I 2936 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=321473.000000 s hg38.chr19_GL949748v2_alt 959634 120 + 1064304 ccCACATTGAC-TTTTGATACAGCAAGTA---------TTTCTTGCTATGGCTCTGTATAATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACACGGCCAATGTCATT s panTro4.chr19 59893510 120 + 63644993 ccCACATTGAC-TTTTGATACAGCAAGTA---------TTTCTTGCTATGGCTCTGTATAATAGAGATGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCCGGCCAATGTCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822443 118 + 60714840 ccCACATTGGC---TTGATACAGCAAGTA---------TTTCTTGTTATGGCTCTGTATGATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCCGGCCAATGTCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336056 120 - 106955855 tcCACATTGAC-TTTTGATATAGCAAGTA---------TTTCTTGCTATGGCTCTGTAGAATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCTGGCCAATGTCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633316 120 + 64156825 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTATGGCTCTGTAGAATACAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACTTGGCCAATGTCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774340 120 + 59248254 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTATGGCTCTGTAGAATACAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACGTGGCCAATGTCATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878702 120 + 51301725 cccaCATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTACGGCTCTGCAGAATAGAGGTGAGTAACTTGGTTGAAGGAATCGTTTGCCCTGTTCATCTCTCTAGACATGGCCAATGTCATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589938 120 + 50890351 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTACGGCTCTGTAGAATAGAGGTGAGTAACTTGGTTGAAGGAATCGTTTGCCCTGTTCATCTCTCTAGACATGGCCAATGTCATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20044745 127 - 122678785 cTCACATTGATTTTTTGATAGAGCAATTAGAACAAATGTTTATTGTTATAGTTCCACAGAGGAGAGGCATGTAACTTGGTTTAGAATGTCATTTGCTCTGTTCATCTCTATAAACCTATCTGTCGCC--- i canFam3.chr1 I 1335 C 0 e calJac3.chr22 45941225 398 + 49145316 I a score=14227.000000 s hg38.chr19_GL949748v2_alt 959754 9 + 1064304 CCTGGCACA s panTro4.chr19 59893630 9 + 63644993 CCCGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822561 9 + 60714840 CCCAGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336176 9 - 106955855 CCCAGCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633436 9 + 64156825 CCCAGCACA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47590058 9 + 50890351 CCCAGCACA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20044872 9 - 122678785 CCTGCCACA i canFam3.chr1 C 0 I 62 e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C a score=4114.000000 s hg38.chr19_GL949748v2_alt 959763 6 + 1064304 CAATC-----t s panTro4.chr19 59893639 6 + 63644993 CAATC-----t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822570 11 + 60714840 CAATCtttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336185 10 - 106955855 CAATC-ttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633445 6 + 64156825 CAATC-----T i rheMac3.chr19 C 0 I 1 s chlSab2.chr6 47590067 6 + 50890351 CAATC-----T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C a score=150209.000000 s hg38.chr19_GL949748v2_alt 959769 289 + 1064304 ttttttttcttgagatggagtctcactctgttgcccagactggagtgcagtggtgcaatcttggcccactgcaacctctgctacccaggttcaagcgattctcctgcctcagcctcccaaatagctgggagtacaggtgtgtgccaccacgcccagctaattttttgtattttagtagagacagggtttcaccgtgttagtcaggatggtctggatctcctaacctcgtgatccgtccgcctcagcctcccaaagtgctgggatgacaggcgtgagccactgtgcccag s panTro4.chr19 59893645 289 + 63644993 ttttttttcttgagatggagtctcgctctgttgcccagactggagtgcagtggtgcaatcttggcccactgcaacctctgctacccaggttcaagcgattctcctgcctcagcctcccaaatagctgggagtacaggtgtgtgccaccacgcccagctaattttttgtattttagtagagacagggtttcaccgtgttagccaggatggtctggatctcctaacctcgtgatccgcccgccgtggcctcccaaagtgctgggatgacaggcgtgagccactgtgcccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822581 289 + 60714840 tttttttttttgagacggagtcttgctctgtcacccagactggagtgcagtggtgcaatcttggcccactgcaacctctgccacccaggttcaagcgattctcctgcctcagcctcccaagtagctgggagtacaggcgtgtgccaccacacccagctgattttttgtattttagtagagacggggtttcaccgtgttagccaagatggtctcaatctcctaacctcgtcatctgtccacctcagcctcccaaagtgctgggatgacaggcgtgagccactgtgcccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336195 289 - 106955855 tttttttttttgagacagagtcttgctctgtcgcccagactggagtgcagtggtgcaatgttggcccactgcaacttctaccacccaggttcaagcgattctcctgcctcagcctcccaagtagctgggagtacaggcgtgtgccaccacgcccagctaattttttgtattttagtagagacggggtttcaccgtgttagccaggatggtctcaatctcctaacctcgtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgatccaccgtgcccgg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e chlSab2.chr6 47590073 0 + 50890351 C e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C e rheMac3.chr19 60633451 1 + 64156825 I a score=18578.000000 s hg38.chr19_GL949748v2_alt 960058 15 + 1064304 ccTAGCACACAATCT s panTro4.chr19 59893934 15 + 63644993 ccTAGCACACAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822870 15 + 60714840 ccTAACACACAGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336484 15 - 106955855 ccTAGCACACAACCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774460 15 + 59248254 CCCAGCACACAATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878822 15 + 51301725 CCCAGCACACAATCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e chlSab2.chr6 47590073 0 + 50890351 C e rheMac3.chr19 60633451 1 + 64156825 I a score=1179.000000 s hg38.chr19_GL949748v2_alt 960073 1 + 1064304 T s panTro4.chr19 59893949 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822885 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336499 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774475 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878837 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590073 1 + 50890351 T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60633451 1 + 64156825 I a score=197263.000000 s hg38.chr19_GL949748v2_alt 960074 92 + 1064304 GACAAAGAATTTCGGTGCGACTTGGGGTACTGTGGTGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAATAGTGCCTGGTGGCA s panTro4.chr19 59893950 92 + 63644993 GACAAAGAATTTCGGTGCGACTTGGGGTACTGTGGTGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAATAGTGCCTGGTGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822886 92 + 60714840 GTCAAAGAATTCCAGTGCGACTTGGGGTACTGTGGAGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAACAGTGCCTGGTGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336500 92 - 106955855 GACAAAGAATTCCGGTGCGACTTGGGGCACTGTGGAGCCTGCTCCATCATCATGCTTCAGCG------GGAAATGTGGATGAACAGTGCctggtggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633452 91 + 64156825 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGGGTGAATAGTGCTTggtggca i rheMac3.chr19 I 1 I 3 s macFas5.chr19 55774476 91 + 59248254 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGggtgactagtgcttggtggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878838 97 + 51301725 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCAGGAAATGGAAATGGGGGTGAATAGTGCTTGGTGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590074 91 + 50890351 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGGGTGAACAGTGCTTggtggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=3075.000000 s hg38.chr19_GL949748v2_alt 960166 3 + 1064304 TGG s panTro4.chr19 59894042 3 + 63644993 TGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822978 3 + 60714840 TGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336592 3 - 106955855 tgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774567 3 + 59248254 cga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878935 3 + 51301725 CGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590165 3 + 50890351 cga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60633543 3 + 64156825 I a score=9292.000000 s hg38.chr19_GL949748v2_alt 960169 12 + 1064304 CAGGTAAAGAAA s panTro4.chr19 59894045 12 + 63644993 CAGGTAAAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822981 12 + 60714840 TGGGTAAGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336595 12 - 106955855 tgggtaaagaaa i nomLeu3.chr10 C 0 I 608 s chlSab2.chr6 47590168 12 + 50890351 cgggtaaagaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 960181 1 + 1064304 T s panTro4.chr19 59894057 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822993 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47590180 1 + 50890351 t i chlSab2.chr6 C 0 T 3383 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=77455.000000 s hg38.chr19_GL949748v2_alt 960182 298 + 1064304 Gttttgttttgtttttttttttgagacagtcttgctctgtcacccaagctggagtgcagtggcgcaatctcggctcactgcaagctccatctcccgggttcacgccatt---ctgcctcagcctccccagtagctgggactacaggcgcccgccacacgcccggctaattttttgtatttgtagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgaccttatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccG s panTro4.chr19 59894058 296 + 63644993 Gtttttgttt--ttttttttttgagacagtcttgctctgtcacccaagctggagtgcagtggcgcgatctcggctcactgcaagctccgtctcccgggttcacgccatt---ctgcctcagcctccccagtagctgggactacaggcgcctgccacacgcccggctaaatttttgtatttgtagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgaccttatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822994 299 + 60714840 Gttttttttt--ttttttttttgagacagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctcagatcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctccccagtagctgggactacaggcgcccgccacacgcccagctagttttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccG i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=481905.000000 s hg38.chr19_GL949748v2_alt 960480 387 + 1064304 Cgggtaaagaaatttatgaagacaatcgtaggtaaaggaaggcagatttattggagaaagtaggaaaagacattggcagagagaccccagcgggcaggttgtcatgag--tagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcggtcttctttcagcagaagtgtttgataaactgaggcgtttcatggcaaacagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccg-tatctcctggaccataaaagcagacctggcccagtgcagtggttcatgcctgcaatcccagcactttgggaggctgaggtg s panTro4.chr19 59894354 389 + 63644993 Cgggtaaagaaatttatgaagacaatcgtaggtaaaggaaggcagatttattggagaaagtaggaaaagacattagcagagagactccagcgggcaggttgtcatgagagtagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcagtcttctttcagcagaagtgtttgataaactgaggcgtttcatggcaaacagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccg-tatctcctggaccataaaagcagacctggcccagtgcagtggttcacgcctgtaatcccagcactttgggaggctgaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56823293 390 + 60714840 CAggtaaagaaatttatgaagacaatcgtaggtaaacaaaggcagatttattggagaaagtaggaaaagacattggcagagagaccacagcaggcaggttgtcatgagagaagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcagtcttctttcagcagaggtgtttgataaactgaggcgtttcatggcaagcagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccgtTATCTCCTGGACCATAAAAGCAGACCTggcccagtgcagtggttcatgcctgtaatcccagcacttagggaggccgaggtg i ponAbe2.chr19 C 0 I 521 s rheMac3.chr19 60633546 392 + 64156825 cgggtaaagaaatttatcaagacaatcgtatgtaaagaaaggcagatttattggagaaagtaggagaagacattggc----agaccacagcaggcaggctgtcacgggagaaactcactgccaggagaccacagcttcctgcagattttatagaatagggcttgggctgattgataaggtcaagtcaacaggcggtttaacttgccatcttccttcagcagacatgtttgataaactgaggcgtttcatggcaagcagggagtttgtgagcagctgtgtgtgtgatctggtcaggaaggctaaacatcttggacca-tatctcctggaccataaaagcagacctggcccggcacagtggttcaca-ctgtaatcccagcactttgggaggctgaggtg i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55774570 392 + 59248254 cgggtaaagaaatttatcaagacaattgtatgtaaagaaaggcagatttattggagaaagtaggagaagacattggc----agaccacagcaggcaggctgtcacgggagaaactcactgccaggagaccacagcttcctgcagattttatagaatagggcttgggctgattgataaggtcaagtcaacaggcggtttaacttgccatcttccttcagcagacatgtttgataaactgaggcgtttcatggcaagcagggagtttgtgagcagctgtgtgtgtgatctggtcaggaaggctaaacatcttggacca-tatctcctggaccataaaagcagacctggcccggcacagtggttcaca-ctgtaatcccagcactttgggaggctgaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878938 393 + 51301725 CGGGTAAAGAAATTTATCAAGACAATcataggtaaagaaaggcagatttattggAGAAAGTAGGAGAAGACATTGGC----AGACCACAGCAGGCAGGCTGTCACGAGAGAAGCTCACTGCCAGGAGACCACAGCTTCCTGCAGATTTTATAGAATAGGGCTTGGGCTGATTGATAAGGTCAAGTCAACAGGCGGTTTAACTTGCCATCTTCCTTCAGCAGACGTGTTTGATAAACTGAGGCGTTTCATGGCAAGCAGGGAGTTTGTGAGCAGCTGTGTGTGTGATCTGGTCAGGAAGGCTAAACATCTTGGACCA-TATCTCCTGGACCATAGAAGCAGACCTGGCccggcgcagtggttcacacctgtaatcccagcactttgggaggctgaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T a score=194839.000000 s hg38.chr19_GL949748v2_alt 960867 234 + 1064304 ggtggatcatctgaggtcagcagttttagactggcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagcctagacgcagtggcacatgcctgtaattccagttacttgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcaacagagtgagactgtctcaaacaga---------- s panTro4.chr19 59894743 234 + 63644993 ggtggatcacctgaggtcagcagttctagactggcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagcctagacgcagtggcacatgcctgtaattccagttactcgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcaacagagtgagactgtctcaaacaga---------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60633938 241 + 64156825 ggtggatcacctgaggtcagtagttctagaccggcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattagcc-agacgcagtggcgcatgtctataattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgcgccactgcattccagcctgggcaac--agtgagactgtctcaaaaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774962 241 + 59248254 ggtggatcacctgaggtcagtagttctagaccggcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattagcc-agacgcagtggcgcatgtctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgcgccactgcattccagcctgggcaac--agtgagactgtctcaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879331 240 + 51301725 ggtggatcacctgaagtcagtagttctagaccggcctggccaacatgacgaaaccctgtctctactaaaaatacaaaaattagcc-cgacgcagtggctcatgtctgtaatcccagctactcgggaggccgaggcaggagaatcacttgaacccgggaggcggaggttgtagtgagccaagattgccccactgcactccagcctgggcaac--agtgagactgtctc-aaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e ponAbe2.chr19 56823683 521 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T a score=74384.000000 s hg38.chr19_GL949748v2_alt 961101 70 + 1064304 cctatagctgacctgtttcctcttgtttgtatgccctgaaccatggaggaaagcttatttatttatttta s panTro4.chr19 59894977 70 + 63644993 cctatagctgacctgtttcctcttgtttgtatgccctgaaccatggaggaaagcttatttatttatttta i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60634179 62 + 64156825 cctatagctgacctgtttcctcttgtttgtatgttctaaaccatggaagaaagcttgttttt-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775203 62 + 59248254 cctatagctgacctgtttcctcttgtttgtatgttctaaaccatggaagaaagcttgttttt-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879571 62 + 51301725 cctgtagctGACCTGTTTCCTCTTGTTTGTATGTTCTAAACCATGGAAGAAAGCttgtttta-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586798 62 + 50890351 CCTATAGCTGACCTGTTTCCTCTTGTTTGTATGTTCTAAACCATGGAAGAAAGCttgtttta-------- i chlSab2.chr6 T 3383 C 0 e canFam3.chr1 20044881 62 - 122678785 I e ponAbe2.chr19 56823683 521 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=150873.000000 s hg38.chr19_GL949748v2_alt 961171 120 + 1064304 ttgag--atggagtcttgctctgttgcccagggtggagtgcagtagtgcgatctcttactacaacctccatctcccaggttcaagcaattctcgagcctcttggcctcccaagtagctgaga s panTro4.chr19 59895047 120 + 63644993 ttgag--atggagtcttgctttgttgcccagggtggagtgcagtagtgcgatctcttactacaacctgcacctcccaggttcaagcaattctcgagcctcttggcctcccaagtagctgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824204 120 + 60714840 ttgag--atggagtcttgctctgttgcccagggtggagtgcagtagtgtgatctcttactgcaacctccacctcccaggttcaagcaattctcgagcctctcggcctcccaagtagctgaga i ponAbe2.chr19 I 521 C 0 s rheMac3.chr19 60634241 86 + 64156825 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaac-------------------------ctcgcgtctctcagcctcccaagtagctg--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775265 86 + 59248254 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaac-------------------------ctcgcgtctctcaacctcccaagtagctg--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879633 111 + 51301725 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaacctccacctcccaggttcaagcaattctcacgcctctcagcctcccaagtagctg--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586860 113 + 50890351 ttgagatatggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaacctccacctcccaggttcaagcaattctcgcacctctcagcctcccaagtagctg--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=116766.000000 s hg38.chr19_GL949748v2_alt 961291 64 + 1064304 ttacaggcatgcgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- s panTro4.chr19 59895167 64 + 63644993 ttacaggcatgcgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824324 64 + 60714840 ttacaggcgtgtgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60634327 55 + 64156825 ---------tgcaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55775351 55 + 59248254 ---------tgtaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47879744 55 + 51301725 ---------tgcaccactacgcctggctactttttgcatttttggtaaagacggggtttctctg-- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47586973 55 + 50890351 ---------tgcaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45941623 66 + 49145316 ttaaaggctcacaccaccacacttggctaatttttgtatttttagtagatatggagtttctccatg i calJac3.chr22 I 398 C 0 e canFam3.chr1 20044881 62 - 122678785 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=465551.000000 s hg38.chr19_GL949748v2_alt 961355 196 + 1064304 ttggccaggctggtctcgaactcctgagctcaagtgatccaccccacctcagcctcccaaagttctgggattataggcatgagc-----caccacacctggccggaaaacacatttgtagcttatttgctttatctgatcccgtgccccc-----cctcccccccgccccatcagcctgcctccttttctctaattgggactccac s panTro4.chr19 59895231 200 + 63644993 ttggccaggctggtctcgaactcctgagctcaagtgatccaccc-acctcagcctcccaaagttctgggattataggcatgaac-----caccacacctggccggaaaacacatttgtagcttatttgctttatctgatcccgcgccccctgccccccccccccacccccatcagcctgcctccttttctctaattgggactccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824388 185 + 60714840 ttggccaggctggtctccaactcctgagctcaagtgatccaccc-acctcagtctcccaaagttctgggattataggcatgagc-----caccacacctggccggaaaacatatttgtagcttatttgctttatctgatt---------------ctcgccccccgccccatcagcctgactccttttctctaattgggactccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337215 186 - 106955855 ttggccagggtggtctcgaactcctgagctcaagtgatccgccc-acctcagccttccaaagtgctgggattataggcatgagc-----caccacgcctggccAGaaaacatatttgtagcttgtttgctttatctgtttt--------------ctcccccggggtcctgtcagcctgactccttttccctaattgggactccac i nomLeu3.chr10 I 608 C 0 s rheMac3.chr19 60634384 184 + 64156825 ttggccaggctggtctggagctcctgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagc-----cgtcacacctggccggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcactgggactccac i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55775408 184 + 59248254 ttggccaggctggtctggagctcctgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagc-----cgtcacacctggccggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcattgggactccac i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47879801 184 + 51301725 ttggccaggctggtctggaactcctgagctcaagtgatccgccc-acctcagcttcccaaagggctgggattagagacatgagc-----cgTCACACCTGGCCGGAAAACATACTTGTAGCTCACTTGCTTTATCTGTT----------------TCTCCAGCTGGTCCTGGTAGCTTCACTCCTTTTCCCTCATTGGAACTCCAC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47587030 189 + 50890351 ttggccaggctggtctggaactcccgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagcACTTTAGTCACACCTGGCTggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcactgggactccac i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45941689 180 + 49145316 ttggccaggctggtctcgaactccggagctcaagtgatctgccc-acctcggcctccgaaaatattgggattataggcatgagc-----cactgcaccGAGCTggaagac--atttataacttatttgctctatctgt-----------------tgccctctgggtcctgtcagc-tgactccttttccctgtttgggactccac i calJac3.chr22 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I a score=569806.000000 s hg38.chr19_GL949748v2_alt 961551 213 + 1064304 aGGAAATACACCTGATTTTGTGTCAATCTCACATGAGTTTGTATTTTGTAGCGTTTACAGAAACG---AAA---GGAAATGTCATCTGCCTGGGTAAA------GAAGTCT------TTAAAGGAAAAAAGCCAGGTCTGTACCATATCTTCCTGCAGGG---AGCTTGGGATCAGATTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCatt------------tat s panTro4.chr19 59895431 213 + 63644993 aGGAAATACACCTGATTTTGTGTCAAGCTCACATGAGTTTGTATTTTGTAGCGTTTCCAGAAACG---AAA---GGAAATGTCATCTGCCTGGGTAAA------GACGTCT------TTAAAGGAAAAAAGCCAGGTCTGTACCATATCTTCCTGCAGGG---AGCTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCATT------------TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824573 220 + 60714840 GGGAAATACACCTGATTTTGTGTCACGCTCACATGAGTTTGTATTTTGTAGCATTTACAGAAACC---AAAGAGGGAAATGTCACCTGCCTGGGTAAA------GAAGTCT------TTAAAGGAGAAAAGCCAGGTCTGTACCATATCTTCCTGCAGTG---AGCTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ATTTTCCTATGTAACACAAAGCATTtat--------gtat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337401 212 - 106955855 aGGAAATACACCTGATTTTGTGTCAAGCTCACATGAGTTTGTATTTTGTAGCGTTTACAGAAACG---GAG---GAAGATGTCACCTGCCTGACTAAA------GAAGTCT------TTAAAGGAGAAAAGCCAGGTCTGTACCATATCTTCCTGCAGTG---AGCTTGGGATCAAGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTGACACAAAGCAT-------------TAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60634568 228 + 64156825 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACTGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtacgtgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775592 228 + 59248254 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCGCCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACCGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGCCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtatgtgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879985 228 + 51301725 AGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACCGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAgcgtttatgtatgtatgtat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587219 228 + 50890351 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGCCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACTATATCTTCCTGCAGTG---AGGCTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtatgtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45941869 196 + 49145316 aGGAAATTCACCTGTTTTTGTGTCAAGCTTACATGAGTTTGTACTTTTTCGCGTTTACAGAAACA---GAG---GAAGATGTCAGCAGCCTGAGAGAAGC---TGAAGCCT------TGAAAAAAGAAATGCCAGGTCTGTATCCTGTCTTCCTGGGGTGAGCAGCTTGGGGTCAGGTTTCGCTTTCTAAACTTCAAGTCCttttt--ttttt----------------------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20044943 215 - 122678785 AAGAAATTCACAT--TTTTGTGTCATGCTCACTTTAATTTGTATTTTGCAGCATTTACACAAGTACAGGAA---GAAGATGTCACAAATCCAGAAGAAGCAAAGGAAGGTT------TGAAAGGAGAAAAGCCAGGTCTGTATCCTATCTTCCTGGA-TG---AGCTTAGTGTCAGGTAGTTCTTGATAACTT-----CTCTATTATCATGTTCTTACTTGACAC-AGGTATTTTT------------ i canFam3.chr1 I 62 C 0 a score=844500.000000 s hg38.chr19_GL949748v2_alt 961764 324 + 1064304 ttatgtatgtatgt----atCgagacggagttttgctcttgttgcccaggctggagtgccgtggcgtgatctcgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgactggctaattttt-tatttttagtagagacaaggtttcttcatgttggtcaggctggtgttgaactcccaatgtcaggtgatctgcctgcctcgacctcccaaagggctgggattacaggcatgagccactgtgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG s panTro4.chr19 59895644 324 + 63644993 TTATGTATGTATGT----ATCgagacggagttttgctcttgttgcccaggctggagtgccatggcgtgatctcgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgactggctaattttt-tgtttttagtagagacaaggtttctttatgttggtcaggctggtgttgaactcccaatgtcaggtgatgtgcctgcctcgacctcccaaagggctgggattacaggcatgggccactgtgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824793 324 + 60714840 gtatgtatgtatgt----atCgagacggagttttgctcttgttgtccaggctggagtgccgtggcatgatcttgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctggaattacaggcctgcgccaccatgaccggctaattttt-aatttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaatgtcaggtgatctgcctgcctcggcctcccaaagggctgggattacaggcatgagccaccgcgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337613 324 - 106955855 TGATGTATGTATGT----ATCgagatggagtttcgctcttattgcccaggctggagtgccgtggcgtgatctcgactcactgcaacctctgcctcccaggttcaagcgattcgcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgaccggctaatgttt-tatttttagcagagacaaggtttcttcatgttggtcaggtcggtcttgaactcccaacctcaggtgatctgcctgcctcagcctccgaaagggctgggattacaggcatgagccaccgcgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60634796 319 + 64156825 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgttcactgcaacctccgtctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagcccccgcgcccagcc---------------------------AACACAAGACATTTTGTTGTTCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775820 319 + 59248254 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgttcactgcaacctccgtctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------AACACAAGACATTTTGTTGTTCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880213 323 + 51301725 gtatatatgtatgtatgcattgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgctcactgcaacctccgtcttccaggttcaagcaatt---gtgcctcagcctcccaagtagctgggaatacaggtgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtgttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------aacacaaGGCATTTTGTTGTTCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587447 319 + 50890351 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgctcactgcaacctccgtctcccaggttcaagcaatt---gtgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatctgcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------AACACAAGGCATTTTGTTGTTCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942065 321 + 49145316 -------------t----a-----atggagtctcactc-tgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcctgggttcaaagaattct-ctgcctcagcctcccaagaagctgggactataggc--gcaccaccacgcccagctaatttttgtatttttagtagaggtggggtttcgccatgttggtcaggctggtcttgaacttctgaccc---gtgaactgcccgcctccgcctcccaacgtgctgggattacaggtgtgagccgccgcactcggccTCAAGTCCTCTTTTTACGCTCCTGTGTAACGGAAAGCA------TGCTTTGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20045158 0 - 122678785 C a score=980283.000000 s hg38.chr19_GL949748v2_alt 962088 305 + 1064304 TTTTCCCTATGGGTAACTGATTGCATC----CTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC s panTro4.chr19 59895968 305 + 63644993 TTTTCCCTGTGGGTAACTGATTGCATC----CTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCAAGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825117 309 + 60714840 TTTTCCCTATGGGTAACTGATTGCATCCTCTCTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTACAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337937 302 - 106955855 TTTTCCCTATGGGTAACTGATTGCATCCTCTGTCTCTCCCTTCCCTCCTCACCAATGAT------AAAGACAATAGGTACAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGCGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCCTACACGGTGGTGCTGCACGGTCCTGCA-GCCTTGGGAAAACCACGCTGGGCCCAGAAACTAATGCTAGACT-GGCAGAGGACAACCTCACCC i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60635115 297 + 64156825 TTTTCCCTATGGATAACTGATTACATC------CTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGCTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGATGACCTCATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776139 299 + 59248254 TTTTCCCTATGGATAACTGATTACATC----CTCTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880536 299 + 51301725 TTTTCCCTATGGATAACTGATTacatc----ctctctcccttccctcctcaccAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587766 299 + 50890351 TTTTCCCTATGGATAACTGATTACATC----CTCTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGAATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACCGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942386 301 + 49145316 TTTTTGCTGTGAATTACCAATTGCATC--TTGTCTATTCCTTCCCTCCCCACTGAAGGG------AAAGAGGACAGGCACAGGAGCATACTGAAGATGAAGTTCCGGCAGATGTGGGAGGC------CTGGCCCGGAGCCAGCAGAGGGGTCCAAGCTGTGGCTCAGAGATACATGACTCTGATCCCATTCAGCAACCCCAGGATACTTCCCGGGCCCTTCCCACACACGGTGGTGCTCCACGGCCCTGCCGGCCTTGGGAAAACCACGCT-GGCCAAGAGATTAATGTTGGACTGGACAGAGGACAACCTCAGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045158 305 - 122678785 TTTTCCTAATGAATAACCAGCTATATC----CTATTTCCAACCTCTTATCACTGAAGGT------AAACAAGATAAGTATATAAGTATATTGAAAGAGAAGGTCCAGCAAATGTGGAAGAAGAACTTTTGGCCTGGAGCCAGTGAAAACATTCACACTGTCACCCAGAAATATGAGACACTGATCCCATTCTGTAATCCTAAAATGCTTGCAGGACCATTTCCACACACGGTGGTGCTGCATGGTCCTGCGGGCGTTGGGAAGACCACTCT-GGCCAAGAAGTGCATGCTGGACTGGACAGAGGACAGCCTTGCAC i canFam3.chr1 C 0 C 0 a score=281822.000000 s hg38.chr19_GL949748v2_alt 962393 92 + 1064304 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCT- s panTro4.chr19 59896273 92 + 63644993 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825426 92 + 60714840 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCGGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGATCTCCAAAGACTGGCCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3649680 90 + 106955855 ACGG--TCAGATACGCGTTCTACCTCAGCTGCAAGGAGCTCAGCCGCATGGGCCCCTGCAGTTTTGCAGAG---CTGATCTCCAAAGACTGGCCT- i nomLeu3.chr10 I 31972 I 1248 s rheMac3.chr19 60635412 92 + 64156825 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCACAG---ATGGTCTTCAGGGACTGGCCT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776438 92 + 59248254 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCACAG---ATGGTCTTCAGGGACTGGCCT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880835 92 + 51301725 AGAAATTCAAATATGCATTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---ATGGTCTTCAGGGACTGGCCT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47588065 92 + 50890351 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---ATGGTCTTCAGGGACTGGCCG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942687 92 + 49145316 ACAAATTCAAATACGCTTTCTACCTCAGCTGCAAAAGGCTCAGCCGCCTGGGCCTGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045463 92 - 122678785 AGACCTGCCCCACTGCCTTCTATCTCAGCTGCAAGGCGCTCAGCCGCAAGGGGATGTGCTCCTTCATAGAACTCCTGGCCC----AGAGTGCCCCA i canFam3.chr1 C 0 C 0 a score=4250211.000000 s hg38.chr19_GL949748v2_alt 962485 1266 + 1064304 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACGGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCGCACCTGG------GGCGCTGATCGAGGACATCTGCGGGGACTGGGAGAAGAAGAAGCCGGTGCCCGTCCTCCTGGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCCGATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGCTAATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGTCCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGTTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGACGCTGAGCCTCCTGGCCGCGCAGGGCCTGTGGGCGCAGACGTCCGTGCTTCACCGAGAGGATCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCCCTGTTCTACACCCTGGAGAAGGAGGAGGAAGAGGA--------TAGGGACGGCCACACCTGGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTCCTTTGGCCTCGCTAACGAGAAGAGAGCCAAGGAGTTGGAGGCCACTTTTGGCTGCCGGATGTCACCGGACATCAAACAGGAATTGCTGCGATGCGACATAAG---TTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGCGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTAAT---AAAGGAGAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCCGAGGTTGAGAGGTGAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT s panTro4.chr19 59896365 1266 + 63644993 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACGGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCGCACCTGG------GGCGCTGATCGAGGACATTTGCGGGGACTGGGAGAAGAAGAAGCCGGTGCCCGTCCTCCTGGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCCGATCTACGTAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCGAGCCATGCGTGCCTTTGAGCTAATGAGGAGCAACGCGGACCTGTTCCAGCGGGGCTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGTGCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGACGCTGAGCCTCCTGGCCGCGCAGGGCCTGTGGGCGCAGACGTCCGTGCTCCACCGAGAGGATCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCCCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGAGGA--------CAGGGACGGCCACACCTCGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTACTTCGGCCTCGCTAACGAGAAGAGAGCCAAGGAGTTGGAGGCCACTTTTGGCTGCCGGATGTCACCGGACATCAAACAGGAATTGCTGCGATGCGACATAAG---CTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAGGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGCGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTAAT---AAAGGAGAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCCGAGGTTGAGAGGTGAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825518 1266 + 60714840 GAATTGCAGGATGACATTCCACACATCCTAGCTCAAGCACAGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCTGCACCTGG------GGCGCTGATCCAGGACATGTGCAGGGACTGGGAGAAGAAGAAGCCGGTGCCTGTCCTCCTGGGGAGTTTGCTGAACAGGTATATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCACTGAGGGACCTCCGGTTCCTGGTGGAGGAGCCAATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGGTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACACGGCCCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGTGGATGCTGAGCTTTCTGGCCGCGCAGGGCCTGTGGGCGCAGATGTCTGTGCTCCACCGAGAGGACCTGGAAAGGCTCAGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACACAGTCTCCAAAGGCTGCTACTCCTTCATTCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGAGGA--------CAGGGACGGCCACGCCTGGGACATTGGGGACATACAGAAGCTGCTTTCCGGAGAAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGATACTACTCCTTTGGCCTCGCTAACGAGAAGAGAGCTAAGGAGCTGGAGGCCACTTTTGGCTGCCGGATATCACCGGACATCAAACAGGAATTGCTGCAATGCGACATAAG---TTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGAAGGAGCTCCTTGGCTGTCTGTACGAGTCTCAGGAGGAAGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTTTGCCTCAAGCACTGTCAAAACCTGCAGAAAATGTCACTGCAGGTAAT---ACAGGCAAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCTGAGGTTGAGAGGTAAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103338339 1266 - 106955855 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGATTGGGAGAAGAAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAGTATGTTACCCAAGGCCGGCCTGCTGGTCACCACGCGGTCCCGGGCCCTGAGGGATCTCCGGCTCCTGGCAGAGGAGCCGATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCCCCGGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGCGAGGACCTGGCCCCCACCTGCCTCACCCGCACGGAGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGAAGCTGAGCCTCCTGGCCGCGCAGGGGCTGTGGGCGCAGATGTCTGTGCTCCACCGAGAGGACCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGCCCGTTCCTGGACGGACACATCCTCCGCCAGGACACAGTCTCGAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCGCTGCGCTGTTCTATGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCACGCCTGGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGGAGAAAGACTGAGGAACCCCGACCTGATTCAAGCAGGATACTACTCCTTCGGCCTCGCTAATGAGAGGAGAGCCAAGGAGCTGGAGGCCACTTTTGGCTGCCGGATTTCACCAGACATCAAACAGGAATTGCTGCGATGCGACGTAAG---TTGTAAGGGTG---GACA---TTCAACGATGACAGACCTGAAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGTGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTCAT---AAAGGCGGAGCTCCCAGAGAATGTCACTGTGTCTGAATCAGACGCTGAGGCTGAGAGGTAAGAACCGT-----TTCAGTTTACCAG-----TGGTTCCATAttt i nomLeu3.chr10 M 100 I 819 s rheMac3.chr19 60635504 1261 + 64156825 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACATAAAATCTTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCATGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGTACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCCGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGAGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACGGAGTCGCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggaggaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCGAAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGGTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGGCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACGTAAG---TCGTAAGAATG---GACA---TTTCACTGCGGCAGACCTGAGGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCTTCATTCTGCTTCAAGCACTGTCAAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAACGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACCGG-----TCGTTT------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776530 1261 + 59248254 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGATGACGACCAAGCCATGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCCGTGTGCTGGATCGTGTGTACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCCGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGGGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAAACATCCTCCGCCAGGACGGAGTCGCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGTTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGGCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACGTAAG---TCGTAAGAATG---GACA---TTTCACGGCGGCAGACCTGAGGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCTTCATTCTGCTTCAAGCACTGTCAAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAACGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACCGG-----TCGTTT------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880927 1258 + 51301725 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTTGTGATTGACGGTTTTGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCAGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCGTGGCAGAGCAGCCGATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGTTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCTGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGGGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCttcatccacctcagcttccagcaGTTTCTCACTGCGCTGTTCTACGccctggaga---aggaggaggagga--------cagggacGGCCATGCCTGGGACATTGGGAACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGTTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGCCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACATAAG---TCGTAAGAATG---GACA---TTCCACGGTGGCGGACCTGAAGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCATCATTCTGCTTCAAGCACTGTCCAAACTTGGAGAAAATGTCACTGCAGGTGATAAGAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAATGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACTGG-----TCGTTT------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47588157 1261 + 50890351 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCCTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAAACCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCAATCTACATAAGGGTGGAGGGGTTCCTGGAGTCGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGAGGAGGACCAAGCCATGCGTGCCTTTGAGTTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGAGCTGTTCCTGCGTTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCTGGGGTGCGCTGCGGGCGCTGAGCCTCCTGGCCGCACAGAGTTTGTGGGCGCAGATGTCCGTGCTCCATGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTATTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGCCGGATGTCACCAGAGATCAAACAGGAATTGCTACAATGCGACATAAG---CCGTAAGAATG---GACA---TTCCACGGTGGCAGACCTGAAGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCATCTTCATTCTGCTTCAAGCACTGTCCAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCATCTGAATCCAACACTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACTGG-----TCGTTT------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942779 1266 + 49145316 GAATTGCAGGGTGACGTTCCAGACATCCTCGCCCAAGCACAGAAAATCCTGTTCGTGGTCGACGGCCTCGATGAGCTGGGAGCCCCACCCGG------GGCGCTGATCCACGACATCTGCGGGGACTGGCTGAAGCCGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGTCCTGGGCCCTGAGGGACCTCCGGCCCCTGATGGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGACACACTTTGGAGAGGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGAAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATGGTGTGCACGAGTCTGAAGCTGCAGATGGAGAATGGGGAGGACCCGGCCACCACCTGCCACACCCGCACGGGGCTGTTCCTGCACTTTCTCTGCAGCCGCTT------CCCGAAGGGTG------------CACAGCTCGGGGGCACGCTGCGGGCGCTGAGCATCCTGGCTGCGCAGGGCCTGTGGGCGCAGATGTCCGTGTTCCACAGAGAGGACCTGGAGAGCTTCAGGGTGCAGGAGTCCGACCTCCGCCCGTTCCTGGACAGAGGCATCCTCCGCCAGGATAGAGACTCTAAAGACTGCTACTCCTTCCTCCACCTCAGCTTCCAGCAGTTTTTCACTGCGCTGTTCTACGCCCTGGAGA---AGGAGGAGGAGGA--------CAGGGACGGCCACGCCTGGGACATTGGGGATGTGCAGAGGCTGCTCTCTGGAGAAGAAAGAGTCCAGAACCCCGACCTGATCCAAGCGGGACACTTCTTATTCGGCCTTGCCAACGAGAAGAGAGCCGCGGAGTTGGAGACCACTTTCGGCTGCGTGATGTCACGGGAGATCAAACAGGAACTGCTGCGGTGCGACATCAT---TTGTGAGGAGGACAGATA---CTCAACCTTGACGGACCTGAAGGAGGTCTTACACTGTCTGTACGAGTCTCAGGAGGGGGAGCTGGTGAAGGCGGTGATGGCCCCGTTGAAAGAAATATCCGTGCACTT---AAGCGCTGCAGACATTGTGCCCTCTTCCTTCTGCCTCAAGCATTGTCGGAACTTGGAGAAAATGTCACTGCAGGTGAT---AAAGGCAAAGCTCCCGGAGAATGTCACTGCCTCTGAATCAGATGCTGAGGCTGAGAGGTAAGAACCGT-----TTCTCTCCACTGG-----TCCTTCCGTCTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045555 1308 - 122678785 GACCTGCAGGATGCCCTTGCACAGGTCCTGACCCAGGCACAGAAACTCCTGTTTGTCATTGATGCTTTCGAGGAGCTGCGCGTGCCCTCAGGGGTGGAGGCGCTGGTGCACGACCTGTGTGTGGACTGGAAGACACAGAGGCCTGCGTCCACCCTCCTGGGGAGCTTACTGAAGAGAAAGCTCTTACCCACGGCCGCCCTACTGGTCACCACACGGCCCGAGGCCCTAAGGGAGCTGCGGCTCATGGTGGAGCAGCCACTCTTCGTGGAGATCGAGGGGCTCTCAGAGTGTGACAGGAAGGCGTATTTCCTGAGACACTTTGGAGAGGAGGCTCAGGCGCTGCGTGCTTTCCACCTGATGAAGAGCAATGCAACGCTGTTCCAAATGGGCGCGGCACCCGCTGTGTGCTGGATGGTGTGCACCTGCCTGAAGCTGCAGATGGACGAGGGTGAGGACCCTGGCCCCACCTGCCAGACCACCACATCGTTGTTGCTGCGTTTCCTCTGCAGCCAGTTTGCGCCCGCGCAGGGCAGCTGTCTGGGGCTGCACCTCAGGTCTACTCTGCACGCTCTGTGCCTGCTGGCCACTGAGGGCGTGTGGACACAGACCTCAGTGTTTGATGGACATGACCTGCTCAGGCTGGGTGTGCATGAGTCTGACCTGCACCCTTTCCTGAACAGGAATATCCTCCAGAAGAGCAGAGACTGTGAGGGCTGCTACTGCTTCCTCCACCTGAGTGTCCAGCAGTTCCTGGCCGCTGCCCTCTACATTCTGGGGAGCCAGGACCACCAAGACCTTCCAGCAGGAA--GCCCTAGCTGGGATGCTGGGAATGTGCAGAGGCTCCTCTCCAAGGAAGAAGGACTCAAGAACCCCTACCTAGCCCCCGTGGGGCACTTCCTATTTGGCCTCACCAATGAAAAGAGGGCCAGGGAGCTGGGGATGACTTTTGGCTGCCTGGTGTCCACCAAGGTCAAGCAGGAACTGCTGGAATGCAGGGTAGGGTCTCCTGAGAACA---GACCCTTCTCCTCGGTGACAGACACGAAGGAGACTTTGCACTGTCTCTATGAATCCCAGGAGGAGCAGCTTGTGAAGGAAGCCATGGTCCAGGTGACAGAAGTGTCCCTGGTTTTCAAAGATACCTCAGACATCATGCATGCATCCTTTTGCCTCAAGCATTGTGAAAGCTTGCAGAAAATGTGGCTGCAGATAGA---AAAGGGGATGTTTCTGGAGAATGATGCTGTGTCAGAATCAGAGGACCAGGCTGACCGGTAAGAATCCTCACTGTTCACTCTGTTAGCTTGCTTTTTC------- i canFam3.chr1 C 0 C 0 a score=5033.000000 s hg38.chr19_GL949748v2_alt 963751 2 + 1064304 AG s panTro4.chr19 59897631 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826784 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60636765 2 + 64156825 AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777791 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882185 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589418 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45944045 2 + 49145316 AG i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046863 2 - 122678785 AG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103339605 819 - 106955855 I a score=141121.000000 s hg38.chr19_GL949748v2_alt 963753 49 + 1064304 CCTCATCCCATGCCCCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT s panTro4.chr19 59897633 49 + 63644993 CCTCATCCCATGCCCCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826786 49 + 60714840 CCTCATCCCATGCACCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3651018 49 + 106955855 TCCCATTCCACGCTCCACTAGGAAGAGGCCAGCG---TCTCCTGTGCCCTGT i nomLeu3.chr10 I 1248 I 3527 s rheMac3.chr19 60636767 49 + 64156825 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777793 49 + 59248254 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882187 49 + 51301725 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589420 49 + 50890351 CCTCATCCCATGCGCCCTTGGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45944047 48 + 49145316 CCTCATCCCAGGGCCCCTTAGGAGGAGGCCAGAG---CTTCCTGGG-ACTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046865 48 - 122678785 CCTCATCCCCTGCG---TTAGAAACAGGGCAGAGTGTCCCCCCGCTCCCTT- i canFam3.chr1 C 0 C 0 a score=117386.000000 s hg38.chr19_GL949748v2_alt 963802 54 + 1064304 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC---TCtttgtttgttttt-------gttttga s panTro4.chr19 59897682 54 + 63644993 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC---TCtttgtttgttttt-------gttttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826835 62 + 60714840 GACTTAGGGTCAGGAATTCCCTCTTGTTGGAC--ttttttgtttgttttttgttttgtttttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340424 54 - 106955855 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC--TCttttgtttgtttgt--------ttttgg i nomLeu3.chr10 I 819 C 0 s rheMac3.chr19 60636816 46 + 64156825 GGCTTAGGCTCAGGAATTCCCTCTTTTTGGAC---TCtttttttttta---------------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777842 52 + 59248254 GGCTTAGGCTCAGGAATTCCCTCTTTTTGGAC---tcttttttttttgtt-------tttt--a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882236 53 + 51301725 GGCTTAGGGTCAGGAATTCCCTCTttttggac---tcttttttttttttt-------tttt-ga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589469 54 + 50890351 GGCTTAGGGTCAGGAATTCCCTCTTTTTGGAC---TCttttttttttttt-------tttttGA i chlSab2.chr6 C 0 I 1410 s calJac3.chr22 45944095 55 + 49145316 GGCTTAGAGTCGGAAATTCCCTCTTGCTGGGC--ttcctttcttgttgct-------gttttga i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046913 57 - 122678785 GGCATAGGATCAGAATTTTCTTCTTGCCAGAATTTCTTCTGCTAGCTTGC-------TCTTCAA i canFam3.chr1 C 0 C 0 a score=10075.000000 s hg38.chr19_GL949748v2_alt 963856 7 + 1064304 gat-ggag s panTro4.chr19 59897736 7 + 63644993 gat-ggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826897 7 + 60714840 gat-ggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340478 8 - 106955855 gataggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636862 7 + 64156825 gac-ggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777894 7 + 59248254 gac-ggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882289 5 + 51301725 gac---ag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45944150 7 + 49145316 gat-ggat i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046970 7 - 122678785 GGT-GGGG i canFam3.chr1 C 0 I 1762 e chlSab2.chr6 47589523 1410 + 50890351 I a score=190724.000000 s hg38.chr19_GL949748v2_alt 963863 83 + 1064304 tcttgctctgtcgctcaggctggagc------gcagtggcgcgatcttggctccctgcaacctccgcctcccgggttcaagtgattctt s panTro4.chr19 59897743 83 + 63644993 tcttgctctgtcgcccaggctggagc------gcagtggcgcgatcttggctcactgcaacctctgcctcccgggttcaagtgattttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826904 83 + 60714840 tcttgctctatcgcccaacctggagc------gcagtggcgtgatcttggctcactgcaacctctgcctcctgggttcaagcgattctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340486 83 - 106955855 tcttgctctgtcacccaggctggagc------gcagtggcatgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636869 83 + 64156825 tcttgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777901 83 + 59248254 tcttgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882294 83 + 51301725 tctcgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacttctgcctcccaggttcaagcgattctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45944157 89 + 49145316 tcttgctctgttgcccatgctggagctggagtgcagtggtgggatctcagctcactgcaacctccacctcccaagttcaagcaattctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20046977 1762 - 122678785 I e chlSab2.chr6 47589523 1410 + 50890351 I a score=838699.000000 s hg38.chr19_GL949748v2_alt 963946 336 + 1064304 ctgcctcagcctcctgagtagctgggactacaggcgcctgccaccttgcccggctaatttttatattttcattagagacgggatctcagcatgttggccagtctggtcttgaactccgcctgacctcaggtgatccacctgcctcagcc-tccaaag---tgggattacaggcatgattcaccatgcccggccCAAATATAt-ttttttaagacagggtcttgctgtgttgctcaggctgga--------gtacagtggtgaaatc--agctcactgcatcctcaaacttctgggttcaagtgat-------------gttcctgagtacctgggatgacaggtattaagtgtgcaccatcatg s panTro4.chr19 59897826 337 + 63644993 ctacctcagcctcctgagtagctgggactacaggcgcctgccaccttgcctggctaatttttatattttcattagagacgggatctcagcatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagccttccaaag---tgggattacaggcatgattcaccatgcccggccCAAATATAt-tttttgaagacagggtcttgctgtgttgctcaggctgga--------gtacagtggtgaaatc--agctcactgcagcctcaaacttctgggttcaagtgat-------------gttcctgagtacctgggatgacagttattaaatgtgtaccatcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826987 339 + 60714840 ctgcctcagccttctgagtagctgggactacaggcgcccaccaccttgcttggctaatttttatattttcagtagagatgggatctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggattacaggcatgattcaccatgcccggccCAAATAttt-ttttttaagacagggtcttgctctgttgctcaggctgga--------gtacagtggcgcaatcatagctcactgcagcctcaaacttctgggttcaagtgtt-------------gttcctgagtacctgggatgacaggtattaggtgtgcaccatcatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340569 347 - 106955855 ctgcctcagcctcctgagtagctgggactacaggcacccgctgtcttgcctggctaatttttatattttcagtagagacgggatctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggattacaggcatgattcaccatgcctggccCAAATATAt-ttttttaagacagggtcttgctctgttgctcaggctggagtacagtggtacagtggtgcaatcatagctcactgcagcctcaaacttcggggttcaagtgaa-------------gttcctgagtacctgggatgacaggtattaggtgtgaaccatcatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636952 331 + 64156825 ctgcctcagcctcctgagtagctggg---------acctgtcaccatgcccggctagtttttgtatttttagtagagacagagtctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggaatacaggcatgattcaccgcgcccggccCAAATATCTAttttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgaa-------------gctcctgggtacctaggatgacaagtattaggtgtgcaccatcgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777984 331 + 59248254 ctgcctcagcctcctgagtagctggg---------acctgtcaccatgcccggctagtttttgtatttttagtagagacagagtctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggaatacaggcatgattcaccgtgcccggccCAAATATCTAttttttaaggcagggtcttgctctcttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgaa-------------gctcctgagtgcctaggatgacaagtattaggtgtgcaccatcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882377 340 + 51301725 ctgcctcagcctcctgagtagctgggactacaggtacctgtcaccatgcccggctagattttgtatttttagtagagacagagtctcgccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctacctcagcctcccaaag---tgggaatacaggcatgattcaccgtgcccagcccaaatatctattttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgat-------------gctcctgagtacctgggatgacaggtattAGGTGTGCACCATCGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590933 340 + 50890351 ctgcctcagcctcctgagtcactgggactataggtacctgtcaccatgcccggctagtttttgtatttttggtagagacagagtctcgccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccagag---tgggaatacaggcatgattcaccgtgcccggccCAAATATCTAttttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgat-------------gctcctgagtacctgggatgacaggtattaggtgtgcaccatcgtg i chlSab2.chr6 I 1410 C 0 s calJac3.chr22 45944246 299 + 49145316 ctacctcagcctcctgagtagctagaattgcaggcatgcaccaccatgcctggctaatttttgtatttctagaagagatggggtctcaccatgttgcccaagcccctctcgaactctg---gacctcaaataatccacctgctttggcctctcaaagtgctgtgactatagatccaagccatcactcccggcc----TTTTT-TTTTTT---------TTTTTTTAAGTTG--AAGGCTGGA---------------------------------------cttaaactcttgggctcaagcaatccttctgccttaggctccaaagtagctgggacta-------gaggtgtgcactgccatg i calJac3.chr22 C 0 I 892 e canFam3.chr1 20046977 1762 - 122678785 I a score=122096.000000 s hg38.chr19_GL949748v2_alt 964282 91 + 1064304 tccagctaacttaagtgggggtttttttttgtgtttttttttttttttttttttttggaaagacaaaatctcactatgttgtccaggctgg s panTro4.chr19 59898163 74 + 63644993 cccagctaacttaagtggggg-----------------ttttttttgcttttttttggaaagacaaaatctcactatgttgtccaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827326 82 + 60714840 cccag------taagtggg---ttttttgtttttttgtgtttttttttttttttttggaaagacagaatctcactatgttgcccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340916 78 - 106955855 cccagctaacttacgtggg---tttttt----------ttttttttttttttttccggaaagacagaatctcactatgttgcccaggctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637283 61 + 64156825 ctcagctaacttaagtga--------------------ctttttttttt--------gaaag--agaatctcactatgttgcccaggctgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778315 67 + 59248254 ctcagctaacttaagtga--------------------ctttttttttt--tttttggaaag--agaatctcactatgttgcccaggctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882717 69 + 51301725 CTCAGCTAActtaagtga--------------------ctttttttttttttttttttaaag--agaatctcactatgttgcccaggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591273 63 + 50890351 ctcagctaacttaagtga--------------------ctttttttttt------tttaaag--agaatctcaccatgttgcccaggctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945437 63 + 49145316 cccagcctttttt-------------------------tttttttttttttttttttgagac--agagtcttgctctgttg-ccaggctgg i calJac3.chr22 I 892 I 80 e canFam3.chr1 20046977 1762 - 122678785 I a score=23278.000000 s hg38.chr19_GL949748v2_alt 964373 18 + 1064304 tcttgaactcccaaagca s panTro4.chr19 59898237 18 + 63644993 tcttgaactcccaaagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827408 18 + 60714840 tcttgaactcccaaagca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340994 18 - 106955855 tcttgaaatcccaaagca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637344 7 + 64156825 tcttga-----------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778382 7 + 59248254 tcttga-----------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882786 18 + 51301725 tcttgaactctcaaagca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591336 18 + 50890351 tcttgaactcTCAAAGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20046977 1762 - 122678785 I e calJac3.chr22 45945500 80 + 49145316 I a score=985349.000000 s hg38.chr19_GL949748v2_alt 964391 409 + 1064304 ctgagattacaggcatgagttaccacacgccctgcctgaatatttcttattgatatgtatagatatgtatatTCCCAATC-------------tttttttttttttttgagacggagtttcactctttttcccaggtcggagtgaagtggctcgatctcggctcactgcaacctccgccccaccaggttcaatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcccgacctcaggtgatccacccgcctcagcctcacaaagtgctaggattataggcgtgagtcaccgtgcccggtcTATATTCTCTATCTTTTATCAATGATGTGCTT s panTro4.chr19 59898255 422 + 63644993 ctgagattacaggcatgagttaccacacgccctgccTGAATATTTCTTATTGATATGTATAGATATGTATATTCCCAATCttttttttttttttttttttttttttttgagacggagtttcactctttttcccaggttggagtgaagtggcttgatctcggctcactgcaacctctgccccaccaggttcaatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcccgacctcaggtgatccacctgcctcagcctctcaaagtgctaggattataggcgtgagtcaccgtgcccagtcTATATTCTCTATCTTTTATCAATGATGTGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827426 399 + 60714840 ctgggattacaggcatgagctaccacacgccctgccTGAATATTTCTTACTGGTATGTATAGATATGTATATTCCCAA---------------tttttttttttttttgagacggagtttcactctttttctcaggttggagtgaagtggctcgatctcagctcactgcaacctccgccccaccaggttccatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagatggggtttcaccatgttggccaggcagatctcaaactcctgacctgaggtgatccacctgcctcagcctcacaaagtgctaggattataggcgtgagccaccgtgcccagtcT--------TCTCTTTTATCAATGATGTGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341012 422 - 106955855 ctgggattacaggcatgagctaccacacACCCTGCCTGAATATTTCTTATTGATATGTATAGATATGTATATTCCCAATCttttttttttttttttttttttttttttgagacagcgtttcactctttttcccaggttggagtgaagtggctcgatctcggctcactgcaacctccgccccaccaggttcaatgattctcctgtctcagcctcataagtagctgggattacagccacccatgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcctgacctcaggtgatccacccgcctcagcctcacaaagtgctaggattacaggtgtgagccaccgtgcccggtcTGTATTCTCTATCTTTTATCAATGATGTGCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637351 389 + 64156825 ctGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTTTTATTGACATGTATA---------------------------tttttttttttttttttttggtgacagcgtttcactcttttgcccaggttggagtgaagtggcccaatctcagctcactgcaacctccaccccaccaggttcattgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccggctaatttttgtacttttagtagagacaaggtttcaccatgttggccaggctggtttcgaactcctgacctcaggtgatcccaccgcctcagccttacaaagcagtaggattagaggcatgagccaccgtacccggccTGTAT------TCTTTTATCAGTGATGTGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778389 404 + 59248254 ctGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTTTTATTGACATGTATA----------TTCACGAtt--tttttttttttttttttttttttttGGTgacagcgtttcactcttttgcccaggttggagtgaagtggcccaatctcagctcactgcaacctccaccccaccaggttcactgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccggctaatttttgtacttttagtagagacaaggtttcaccatgttggccaggctggtttcgaactcctgacctcaggtgatcccaccgcctcagccttacaaagcactaggattacaggcatgagccaccgtgcccggccTGTAT------TCTTTTATCAATGATGTGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882804 397 + 51301725 ctgggatcacagacatgaggtACCATACACCCtgcctaaatattttttattgacatGTATA----------TTCacgat---------tttttgttgttgttgttgttgagacaacgtttcactcttttgcccaggttggagtgaagtggctcgatctcagctcactgcaacctccaccccaccaggttcaatgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccagctaatttttgtacttttagcagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatcccaccacctcagcctcacaaagcactaggattacaggcatgagccaccgtgcccggcctgtat------tcTTTTATCAATGTTGTGCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591354 391 + 50890351 CTGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTCTTATTGACATGTATA----------GTCACAGT---------Ctttttcttttttttt----gagacagcgtttcactc--ttgcccaggttggagtgaagtggctcgatctcagctcactacaacctccaccccaccaggttcaatgattctcctgcctcagcctcacaagtagctgggattacctccacccacaaccacgcccagctaatttttgtacttttagtagagacaaggtttcaccgtgctggccaggctggtctcgaactcctgacctcaggcgatcccgccgcctcagcctcacaaagcactaggattacaggcgtgagccaccgtgcctggccTGTGT------TCTTTTATCAATGATGTGCGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945580 315 + 49145316 ctgggactacaggcgcacgccaccaa-------gcccagcTAAT--------------------------------------------ttttttttctttttctttttgagacagagtttcacttttttgcctaggttggagtgaaatggcacaatctcagctcactgca--------------------------------------------------------attgcaggcacccgccaccatgcccagctaattttcatatttttagtagagactgggttttgccatgttggtcaggctggtctccaactcttgacctcaggtgatttacctgcctcagcctcccaaagcgctaggattacaggtgtgagccaccatgcccACACTGTATTCCCAATCTTTTATCTATGATATGTTT i calJac3.chr22 I 80 C 0 e canFam3.chr1 20046977 1762 - 122678785 I a score=156376.000000 s hg38.chr19_GL949748v2_alt 964800 53 + 1064304 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAATAGG s panTro4.chr19 59898677 53 + 63644993 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAATAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827825 53 + 60714840 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341434 53 - 106955855 AGCATTTTAACTTATTTTTACCCTCTACTGGA-TTTTTGTGTAAGAAGAATAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637740 50 + 64156825 AGCATTTTAACTTATTTTTACCCTCTGTTGGA-TTTTTGTGT---AAGAGTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778793 50 + 59248254 AGCATTTTAACTTATTTTTACCCTCTGTTGGA-TTTTTGTGT---AAGAGTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883201 51 + 51301725 agcattttaacttatttttaccCTCTGTTGGATTTTTTGTGT---AAGAGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591745 50 + 50890351 AGCATTTTAACTCATTTTTAGACTCTGTGGGA-TTTTTTTGT---AAGAATAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945895 53 + 49145316 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTGTAAGAAGTATAAG i calJac3.chr22 C 0 I 481 s canFam3.chr1 20048739 53 - 122678785 agaaTTTTGGCTTATTCTGACCCTCTGTAAGA-TTCTTGTGCAAGAAATTTGAG i canFam3.chr1 I 1762 C 0 a score=1268441.000000 s hg38.chr19_GL949748v2_alt 964853 397 + 1064304 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGCTAATAAGTGATTACATGGTCCAGCTTTCAATTG----------TACTCATTTGTCAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGGTGTAA-CCC--TTTCTTCTCTTCCCTATAGATCCCAGGATGATCAGCACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGATCAAATAAGGATCTGATGGGTCTAGCAATCAATGATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAACTCAAATCCTTAGGGTATGAAAAT s panTro4.chr19 59898730 398 + 63644993 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGCTAATAAGTGATTACATGGTCCAGCTTTCAATTA----------TACTCATTTGTCAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGGTGTAACCCC--CTTCTTCTCTTCCCTATAGATCCCAGGATGATCAGCACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGATCAAATAAAGATCTGATGGGTTTAGCAATCAACGATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCGTGAACTAAAATCCTTAGGGTGTGAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827878 395 + 60714840 TTCTTTGTCCTGTGATGCTTTTTGGGTGTTGAGTTGTCTGATGGTGGTGC---TAAATGATTAAATGGTCCAGTTTTCAATTA----------TACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACATACA----------------------TTTGGTGTAACCCG--CTTCTTCTCTTCCCTGTAGATCCCAGGATGATCAGCACGTGCTTCCTTTCTGGATGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGCAATCAATAATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAAGGAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCGTGAACTGAAATCCTTAGGGTGTGAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341487 392 - 106955855 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGC---TAAATGATTAAATGGTCCAGCTTTCAGTTA----------TACTTATTTGTTAGGGGTATATGCACAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGATGTAACCCC-----CTTCTCTTCCCTGTAGATCCCAGGATGATGAGCACGTGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTTATGGGTCTAACAATCAATAATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAATTAAAATCCTTAGGGTGTGAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637790 401 + 64156825 TTCTTTCTTCTGTGATGCTTCTTGGCTGTTGAGTTGTCTGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTATAGATCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAATAGCTTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGACTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778843 401 + 59248254 TTCTTTCTTCTGTGATGCTTCTTGGCTGTTGAGTTGTCTGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTGTAGACCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAATAGCTTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGACTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883252 401 + 51301725 TTCTTTCTTCTGTGATGCTTCTTGGGTGTTGAGTTGTCCGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTACACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCcatgatgaacctaca-----------------------ttgatgTAACCCC-----TTTCTCTTCCCTGTAGATCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGAgtctagaaatcaataatagctTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGAGTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591795 401 + 50890351 TTCGTTCTTCTGTGATGCTGCTTAGGTGTTGAGTTGTGTGATGGTAGTGC---CAAATGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTGTAGATCCCAGGATGACCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAACAGCTTTCTGAGTGCCTCCCTAGTGAGGATCCTGTGTGAACAGATAGCCTCTGACAGTTGTCATCTCCAGAGAGTGGTGTAAGCAGACACTAATTCATGAACTAAAATCCTAAGGCTGTGAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45946429 395 + 49145316 TTCTTTCTCCTGTGATGTGTCTTGGGCATTGAGTTGTCTGACAGTGGTGA---TAAATGATTAAATGGTCCAGCTTTCAATTC----------TACTTGTGTATTAGGGGTGTGTGCCCAGAGAAGCCCTAAACACTTTGGCCATGACGGATGCACG----------------------TTTGATGTGACCCC--CTTCTTCCTTTCCCTGCAGATCCCAGGATGATCAACACCTGCTTCCTTTCTGGACGGATCTTTGTTCCGTATTTGGCTCAAACAAGGATCTAATCACTCTAGAAATCAATAATAGCTTTCTTAGTGCCTCACTGTTACGGATCCTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAACTAAAATCCTTAGGATGTGAAAGt i calJac3.chr22 I 481 I 305 s canFam3.chr1 20048792 415 - 122678785 --TTTTTTCCAGTGACATGTCTTAGGTGATGAATTGTCTGATAGTGACAC---TAAGTCATTAAATCATCTGACTTTTAGAGT------------TCTATTTACTAGGAGTGTGTGCCCAGAGCAACCCTAAATATCTTCATGATGTTGGACAAATGTTATATTTTCTCTCCAGCAATCTTTGGTAAATTCCTTCCTTTGCCTTTTCCCAACAGGTCCCAGAATGATCAACACGTGCTTCCTTTCTGGATAGACTTCTGTTCCATGTTTGACTCAAATAAAAACCTGATATTTCTAGACATCAGTCAGAGCTTCCTTAGTGCCTCATCTGTGAGAATTCTCTGTGAAAAAATAACCTCTGCTACCCATAATCTTCAGAAAGTGGTGTAAGTAGAAGCTAACCCCTGGATGAAAACCCCTAGGGCATAACCAA i canFam3.chr1 C 0 C 0 a score=-899.000000 s hg38.chr19_GL949748v2_alt 965250 2 + 1064304 GG---- s panTro4.chr19 59899128 2 + 63644993 GG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828273 2 + 60714840 GT---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341879 2 - 106955855 GT---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638191 2 + 64156825 GT---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779244 2 + 59248254 GT---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883653 2 + 51301725 GT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592196 2 + 50890351 GT---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20049207 6 - 122678785 GCTCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45946824 305 + 49145316 I a score=121335.000000 s hg38.chr19_GL949748v2_alt 965252 37 + 1064304 TACAATGTTAA-----------CATCGGAGCAATATTCAGATTCCTGT s panTro4.chr19 59899130 37 + 63644993 TACAATGTTAA-----------CATTGGAGCAATATTCAGATTCCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828275 37 + 60714840 TACAATTTTAA-----------CGCTGTAACAATATTCAGATTCCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341881 37 - 106955855 TACAATTTTAA-----------CATTGGAGCAATATTCAGATTCCTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638193 37 + 64156825 TACAATTTTAA-----------TATTGGAACAATATTCAAATTCCTGT i rheMac3.chr19 C 0 I 304 s macFas5.chr19 55779246 37 + 59248254 TACAATTTTAA-----------TATTGGAACAATATTTAAATTCCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883655 37 + 51301725 TACAATTTTAA-----------TATTGGAACAATATTCAAATTCCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592198 37 + 50890351 TACAATTTTAA-----------TATTGGAACAGTATTCAAATTCCTGT i chlSab2.chr6 C 0 I 314 s calJac3.chr22 45947129 37 + 49145316 TACATTTTTAA-----------TATTGGAGCAATATTCAAATTCCTGT i calJac3.chr22 I 305 C 0 s canFam3.chr1 20049213 48 - 122678785 TACATTTTTAAGGCTCCATTTTTATTGGAGCAATATTTGAATTCCTTT i canFam3.chr1 C 0 C 0 a score=1808.000000 s hg38.chr19_GL949748v2_alt 965289 2 + 1064304 AC s panTro4.chr19 59899167 2 + 63644993 AC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828312 2 + 60714840 CC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341918 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779283 1 + 59248254 -C i macFas5.chr19 C 0 I 303 s papAnu2.chr19 47883692 1 + 51301725 -C i papAnu2.chr19 C 0 I 352 s calJac3.chr22 45947166 2 + 49145316 CC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20049261 2 - 122678785 TC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47592235 314 + 50890351 I e rheMac3.chr19 60638230 304 + 64156825 I a score=247639.000000 s hg38.chr19_GL949748v2_alt 965291 87 + 1064304 TAGACTC---TTAAGTGCTCGAGACACAGGGAATTGAGAGAGTCCTGT---CCTTAAATTTATTTTGTGGGATAATCGTATAAAGTAATTT----------------CT s panTro4.chr19 59899169 87 + 63644993 TAGACTC---TTAAGTGCTCAAGACACAGGGAATTGAGAGAGTCCTGT---CCTTAAATTTATTTTGTGGGGTAATCGTATAAAGTAATTT----------------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828314 103 + 60714840 TAGACTC---TTAGGTGCTCAAGACACAGGGAATTGAGAGAGTCTTGT---CCTTAAATTTGTCTTGTGGGATAATCGTATAAAGTAATTTAGTAATTTAGAAATTACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341920 87 - 106955855 TAGACTT---TTAAGTGCTCAAGACACAGGGAATTGAGGGAGTCCTGT---CCTTAAATGTGTCTTGTGGGATAATCATATAAAGTAATTT----------------CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638534 85 + 64156825 TAGACTC---TTAAGTGCTGAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------TT i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55779587 85 + 59248254 TAGACTC---TTAAGTGCTGAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------TT i macFas5.chr19 I 303 C 0 s papAnu2.chr19 47884045 85 + 51301725 taGACTC---TTAAGTGCTCAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------tt i papAnu2.chr19 I 352 C 0 s chlSab2.chr6 47592549 85 + 50890351 TAGACTC---TTAAGTACTCAAGACACAGGGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCATGGGATAATCGTATAAAGTAATTT----------------TT i chlSab2.chr6 I 314 C 0 s calJac3.chr22 45947168 88 + 49145316 TAGACTC----TAAGTGCTCAAGACACGAGGAATTGAGAGAGTCCTACCAGCCTTAAATTTGTCTTGTGGGATAATCATATAAAGTAACTT-----------------T i calJac3.chr22 C 0 C 0 s canFam3.chr1 20049263 86 - 122678785 CAGAATCCAACTGGGCATTCAAGACATAAGAAGTTGAGATGGTCCATA---CCATACATTTGTCTACTG----AAGCATATGAAGTAATTT----------------TT i canFam3.chr1 C 0 I 1652 a score=556.000000 s hg38.chr19_GL949748v2_alt 965378 2 + 1064304 A-------------G s panTro4.chr19 59899256 2 + 63644993 A-------------G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828417 15 + 60714840 AAATTACTTTATACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342007 2 - 106955855 A-------------G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638619 2 + 64156825 A-------------G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779672 2 + 59248254 A-------------G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884130 2 + 51301725 a-------------g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592634 2 + 50890351 A-------------G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947256 2 + 49145316 A-------------G i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I a score=230973.000000 s hg38.chr19_GL949748v2_alt 965380 106 + 1064304 Gggctgggcatggtggttcacacttgtaattccaacacttcgggaggccgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacgtgacaa s panTro4.chr19 59899258 106 + 63644993 Gggctgggcatggtggttcacacttgtaattccaacacttcgggaggccgaggcagacagatctcttgaggtcaggagttcgagaccagcctggccaacatgacaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828432 106 + 60714840 Aggcagggcatggtggttcacacctgtaattccaacacttcgggaggccgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacattacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342009 106 - 106955855 Gggctgggcatagtggttcacacctgtaattccaacacttcgggaggctgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacatgacaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638621 106 + 64156825 Gggtcgggcacagtggctcacacctgtaattccaacacttcgggaggccgaggcagatagatcacttgaggtcaggagtttgagaccagcctggccaacatgacaa i rheMac3.chr19 C 0 I 46 s macFas5.chr19 55779674 106 + 59248254 Gggtcgggcacagtggctcacacctgtaattccaacattttgggaggccgaggcagacagatcacttgaggtcaggagttccagaccagcctagccaagatggcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884132 105 + 51301725 gggccgggcatggtggctcacacctgtaattccaacactttgggaggccgaggcagacagatcacttg-ggtcaggagttccagaccagcctagccaagatggcaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947258 106 + 49145316 Tggcagggcacagtggctcacaccagtaatctcagcactttgggaggctgaggcgtatggataacttgacataaggggttcaagaccagcctggccaacatggtga i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C a score=130769.000000 s hg38.chr19_GL949748v2_alt 965486 82 + 1064304 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgggaggctgagg------- s panTro4.chr19 59899364 82 + 63644993 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgggaggctgagg------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828538 82 + 60714840 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgagaggctgagg------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342115 82 - 106955855 aactctgcctctactaaaaata----caaaaattatccaggcatggtgacaggcacctgtaatctcagctacttaggaggctgagg------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779780 82 + 59248254 aaccccgcctctactaaaaata----caaaaattatccgggcgtggtggcgggcgcctgtaataccagctacttcggaggctgagg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884237 82 + 51301725 aaccccgcctctactaaaaata----caaatattatccgggcgtggtggcgggcgcctgtaatagcagctacttcggaggctgagg------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947364 93 + 49145316 aaccccatctctactaaaaatatttttaaaaattagccagctctggtggcaggtgcctgtaatcccagctacttgggatgttgagggttgagg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C e rheMac3.chr19 60638727 46 + 64156825 I a score=105742.000000 s hg38.chr19_GL949748v2_alt 965568 130 + 1064304 caggagaattacttgaacccaggaggcggaggt----tgcagtgaaccaagatcctgccactggactccagtctgagtgacagagcgagactgcgtctcaaaaaaaaaaaaaaa----aaaaaagaaaaagaaaaaaa s panTro4.chr19 59899446 123 + 63644993 caggagaattacttgaacccaggaggcggaggt----tgcagtgaaccgagatcctgccactggactccagtctgagtgacagagcgagactcggtctcaaaaaaaaaaaaaaa-----------aaagagaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828620 117 + 60714840 caggagaattgcttgaacccaggaggcggaggt----tgcagtgaaccaagatcttgccactagactccagtctgagtgacagagcgagactctgtctcaaaaaaaaaaaaaaa-----------------gaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342197 112 - 106955855 cgggagaattccttgaacccaggaggcggaggt----tgcagtgaaccgagatcctgccactggactccagcctgagtgacagagcgagactctgtctccaaaaaaaaaaGGCG----------------------GG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47884319 136 + 51301725 --taagagtcgcttgagtccgggaggtggagtttgcatgcagtgagctgagatcgcgccgctgtgctccagcctgcgcgacagagtgagactccatctcaaaaaaaaaaacaatctataaagatttaaaataaaaaaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947457 112 + 49145316 caggagaattgcttgaacccaggaggcagaggt----tgcagtgagctgagatcatgccactgcactgcagcctgagcaaac-----agactccatctcaaaaaaaaaaaaaaG-----------------TTAAAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C e macFas5.chr19 55779862 0 + 59248254 C e rheMac3.chr19 60638727 46 + 64156825 I a score=166047.000000 s hg38.chr19_GL949748v2_alt 965698 149 + 1064304 Gggccgggcacaatggctcacgcctgtagtcccagcactttgggggcccaagg-tggggggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaagaccctgtctctacgaaaaatacaaaaatttgccaggtgtc s panTro4.chr19 59899569 149 + 63644993 Gggccgggcacaatggctcacgcctgtagtcccagcactttgggggcccaagg-cggggggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaagaccctgtctctacaaaaaatacaaaaatttgccaggtgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828737 149 + 60714840 Gggccgggcacaatggctcacgcctgtagtcccagcacttcgggggcccaagg-cggagggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaaaaccctgtctctactaaaaatacaaaaatttgctaggtgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342309 147 - 106955855 Gggccgggcacagtggctcacgcctgtaatcccagcactttgggggcccgagg-cggggggatcacctgaggtcaggagttcgagaccagcctggccaagatg--gcaaaaccctgtctctactaaaaatacaaaaatttgccaggcgtg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47592636 146 + 50890351 Gggccgggcacggtggctcacacctgtaattccagcactttgggaggccaagg-cagacagatcacttgaagtcaggagttccagaccagcctagccaagatg--gcaaaaccccgcctctactaaaaatac-aaaattatccgggcgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947569 148 + 49145316 Gggctgggggcggtggctcacgcctggaatcccagcactttgggaagtcaaggccaggggaatcacttgaggtcaggagttcaagactaacctggccaagatg--gcaaaaccctatctctactaaaaatataaaaattagctgggcgag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e macFas5.chr19 55779862 0 + 59248254 C e rheMac3.chr19 60638727 46 + 64156825 I a score=57877.000000 s hg38.chr19_GL949748v2_alt 965847 42 + 1064304 gtggcaggtgcctataatcccagctactccggatgctgaggg s panTro4.chr19 59899718 42 + 63644993 gtggcaggtgcctataatcccagctactccggatgctgaggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828886 42 + 60714840 gtggcaggtgcctataatcccagctattccagatgctgaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342456 42 - 106955855 gtggcaggtgcctataatcccagctactccggatgctgaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638773 41 + 64156825 gtggcgggcgcctgtaataccagctacttcggaggccgagg- i rheMac3.chr19 I 46 C 0 s chlSab2.chr6 47592782 41 + 50890351 gtggcgggcgcctgtaataccagctactctggaggctgagg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947717 41 + 49145316 gtggcaggcacctgtaactccaggaactcttgaggctgggg- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e macFas5.chr19 55779862 0 + 59248254 C a score=207987.000000 s hg38.chr19_GL949748v2_alt 965889 101 + 1064304 --taggagtcgcttgaatccgggaggcagagtttgctttgcagtgagccgagatcgcgccactgcactc---cagcctgggcaacagagtgagactccatctcaaa s panTro4.chr19 59899760 104 + 63644993 --taggagtcgcttgaatccgggaggcagagtttgctttgcagtgagccgagatcgcgccactgcactccagcagcctgggcaacagagtgagactccatctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828928 101 + 60714840 --taggagtcacttgagtccgggaggcagagtttgctttgcagtgagccgagatcacgccactgcactc---cagcctgggcgacagagtgagactccatctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342498 101 - 106955855 --taggagttgcttgaatccaggaggcagagtttgctttgcagtgagcgaagatcgtgccactgcattc---cagcctgggcgacagagtgagactccatctcaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638814 100 + 64156825 --taagagtcacttgagtccgggaggtggagttcgc-atgcagtgagccgagatcgtgccactgcgctc---cagcctgtgcaacagagtgagactccatctcaaa i rheMac3.chr19 C 0 I 31 s macFas5.chr19 55779862 100 + 59248254 --taagagtcacttgagtccgggaggtggagtttgc-atgcagtgagctgagatcgtgccactgcgctc---cagcctgtgcgacagagtgagactccatctcaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47592823 100 + 50890351 --taagagtcgcttgagtccgggaggtggagtttgc-atgcagtgagctgagatcgcgccactgcactc---cagcctgggcgacacagtgagactccatctcaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947758 96 + 49145316 caggagaatcacttgaatcagggagatgaaggttgc-----agtgagccgagatcatgccactgcactc---cagcctgggtgac--ggtgagactctatctcaaa i calJac3.chr22 C 0 I 3 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C a score=8350.000000 s hg38.chr19_GL949748v2_alt 965990 11 + 1064304 ga---aaaaaaaaa s panTro4.chr19 59899864 11 + 63644993 ga---aaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829029 12 + 60714840 ga--gaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342599 14 - 106955855 gaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779962 7 + 59248254 -------aaaaaaa i macFas5.chr19 C 0 I 2 s chlSab2.chr6 47592923 11 + 50890351 ---aaaaaaaaaaa i chlSab2.chr6 C 0 I 25 s calJac3.chr22 45947857 11 + 49145316 ---gaaaaagaaaa i calJac3.chr22 I 3 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=17182.000000 s hg38.chr19_GL949748v2_alt 966001 16 + 1064304 TCTGTAAAGATGGACA s panTro4.chr19 59899875 16 + 63644993 TCTGTAAAGATGGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829041 16 + 60714840 TTTGTAAAGATGGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342613 16 - 106955855 TCTGTAAAGATGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779971 16 + 59248254 tatataaagatttaaa i macFas5.chr19 I 2 I 4 s calJac3.chr22 45947868 16 + 49145316 TCTGTAAAGATGGACA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592934 25 + 50890351 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=1911.000000 s hg38.chr19_GL949748v2_alt 966017 1 + 1064304 A s panTro4.chr19 59899891 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829057 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342629 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779991 1 + 59248254 a i macFas5.chr19 I 4 I 1 s chlSab2.chr6 47592959 1 + 50890351 A i chlSab2.chr6 I 25 I 1 s calJac3.chr22 45947884 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=2104.000000 s hg38.chr19_GL949748v2_alt 966018 4 + 1064304 AAAT s panTro4.chr19 59899892 4 + 63644993 AAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829058 4 + 60714840 AAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342630 4 - 106955855 AAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638945 3 + 64156825 aaa- i rheMac3.chr19 I 31 C 0 s macFas5.chr19 55779993 3 + 59248254 aaa- i macFas5.chr19 I 1 C 0 s chlSab2.chr6 47592961 3 + 50890351 AAA- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45947885 4 + 49145316 AAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C a score=5576.000000 s hg38.chr19_GL949748v2_alt 966022 2 + 1064304 TT s panTro4.chr19 59899896 2 + 63644993 TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829062 2 + 60714840 TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342634 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638948 2 + 64156825 tt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779996 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884455 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592964 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947889 2 + 49145316 CT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I a score=147935.000000 s hg38.chr19_GL949748v2_alt 966024 63 + 1064304 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATCG-----AGCCCCTGGTTTCCATTTAAGTAC s panTro4.chr19 59899898 63 + 63644993 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATCG-----AGCCCCTGGTTTCCATTTAAGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829064 63 + 60714840 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATTG-----AGCCCCTGGTTTCCATTTAAGTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342636 63 - 106955855 AAACATGGAAAAAATAGTTGCTAAAGTTTAAATATATTG-----AGCCCCTGGTTTCTATTGAAGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638950 54 + 64156825 aaaCATGGAAAAAAT---------AGCCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i rheMac3.chr19 C 0 I 911 s macFas5.chr19 55779998 54 + 59248254 AAACATGGAAAAAAT---------AGCCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884457 54 + 51301725 aaacatggaaaaaat---------agtctaaataTATTG-----AGCCCCTAGTTTCTATTTAAGTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592966 54 + 50890351 AAGCATGGAAAAAAT---------AGTCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947891 67 + 49145316 AAACATGGAGAAAAA-GTTTCTGAAGTTTAAATACATTGTTTTTAAACTTGTATTTCTGTTTAAGTGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051001 56 - 122678785 aaaTATGAACAAAGT---TTCCAGTGTTTAAACCTGTTG----CAGCCCTTTGTTCTCATGTA----- i canFam3.chr1 I 1652 C 0 a score=3848.000000 s hg38.chr19_GL949748v2_alt 966087 3 + 1064304 GAT s panTro4.chr19 59899961 3 + 63644993 GAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829127 3 + 60714840 GAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342699 3 - 106955855 GAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55780052 3 + 59248254 AAC i macFas5.chr19 C 0 I 1009 s papAnu2.chr19 47884511 3 + 51301725 AAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593020 3 + 50890351 AAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947958 3 + 49145316 AAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051057 0 - 122678785 C e rheMac3.chr19 60639004 911 + 64156825 I a score=3276.000000 s hg38.chr19_GL949748v2_alt 966090 1 + 1064304 A s panTro4.chr19 59899964 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829130 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342702 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60639915 1 + 64156825 a i rheMac3.chr19 I 911 C 0 s macFas5.chr19 55781064 1 + 59248254 a i macFas5.chr19 I 1009 C 0 s papAnu2.chr19 47884514 1 + 51301725 A i papAnu2.chr19 C 0 I 707 s chlSab2.chr6 47593023 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947961 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051057 0 - 122678785 C a score=263710.000000 s hg38.chr19_GL949748v2_alt 966091 95 + 1064304 CAGGTGTACACACTAAAGATTTCAC-TTTCGTTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC s panTro4.chr19 59899965 95 + 63644993 CAGGTGTACACACTAAAGATTTCAC-TTTCGTTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829131 107 + 60714840 CAGGTGTACACACTAAAGATTTAACTTTTCGTTCTCTATGCGTCTTTTCCCTAGGTTCAAAAACATTTTCCCCAGCTGTATTTAATCGTCTAACCTCTGCCTAGCTC i ponAbe2.chr19 C 0 I 457 s nomLeu3.chr10 103342703 95 - 106955855 CAGATGTGTACACTCAAGATTTCAC-TTTCATTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCTTCG--GAACCTCTGCCTAGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60639916 90 + 64156825 caGGTATAGACACTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTTCCCAGCTGATGCTTATCG--GAACCTCTGCCTAGCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781065 90 + 59248254 caGGTATAGACAGTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTTCCCAGCTGATGCTTATTG--GAACCTCTGCCTAGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885222 90 + 51301725 cAGGTATAGACACTCAagatttcac-ttt-------------tgttttcccTAGGTTCAAAAACG-TTTTCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC i papAnu2.chr19 I 707 C 0 s chlSab2.chr6 47593024 90 + 50890351 TAGGTATAGACACTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCCTCG--GAACCTCTGCCTAGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947962 93 + 49145316 GAGATACAGACACTCAACATTTCAC-TTTGGT----------GCTTTTTTCTAGGATCAAAAACA-TCTCCCCAGCTGATGCGTATCG--GAATCTCTGCCTAGCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051057 91 - 122678785 ----TATATAAATGCAAGATTTCAC-CTTTCTTA--------TCCTTTCCCTAGCCTCAAAAATA-TTTTCCCAGCAGACGCTTATAG--AAACTTCTGCATTGCTT i canFam3.chr1 C 0 C 0 a score=143331.000000 s hg38.chr19_GL949748v2_alt 966186 42 + 1064304 TTCGAGGTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA s panTro4.chr19 59900060 42 + 63644993 TTCGAGGTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829695 41 + 60714840 TTCGAGGTCACAAGACTGTAACGTATCTGA-CCTTCAAGGCA i ponAbe2.chr19 I 457 C 0 s nomLeu3.chr10 103342798 42 - 106955855 TTCGAGCTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640006 42 + 64156825 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTTCAAGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781155 42 + 59248254 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTTCAAGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885312 42 + 51301725 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTGCAAGGCA i papAnu2.chr19 C 0 M 50 s chlSab2.chr6 47593114 42 + 50890351 TTCGAGGTCACAAGACTGTAACACATCTGACCCTTCAAGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948055 42 + 49145316 TTCAAGGTCAAAAGACTGTAACATATCTAAGACTTCGAGGCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051148 42 - 122678785 TTGGTGGTCATGAGACTCTCACGCATCTGACTCTCCAAGGAA i canFam3.chr1 C 0 C 0 a score=109291.000000 s hg38.chr19_GL949748v2_alt 966228 42 + 1064304 ATGACCAGGATGA-TATGTTTCCC-GCATTGTGTGAGGTCTTGA s panTro4.chr19 59900102 42 + 63644993 ACGACCAGGATGA-TATGTTTCCC-GCATTGTGTGAGGTCTTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829736 44 + 60714840 ATGACCAGAATGATTATGCTTCCCGGCATTGTGTGAGGTCTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342840 42 - 106955855 ATGACCAGAATGA-TATGCTTCCC-ACATTGTGTGAGGTCTTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640048 42 + 64156825 CTGACCAGAAGGA-TATGCTTCCT-GCATTGTGTGAGGTCTTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781197 42 + 59248254 CTGACCAGAAGGA-TATGCTTCCT-GCATTGTGTGAGGTCTTGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47593156 42 + 50890351 CTGACCAGAAGGA-TATGCTTCCC-GCATTGTGTGAAGTCTTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948097 42 + 49145316 GTGCCCAGAACGA-TACGCTTCCT-GCACTGTGTGAGGTCCTGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051190 42 - 122678785 ATGACCAGAATGA-TATGCTTCCC-ATTTTGTGTGAAATCTTGA i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47885354 50 + 51301725 M a score=795717.000000 s hg38.chr19_GL949748v2_alt 966270 252 + 1064304 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTAATCATTAAAATCCTTCATCATACAAACATAAGCTACCACAAGCTTATGTGGCAATTTTGTGTAAATAAGAA--------AAAGTTCGTTATTCTGACTAGAAACAGTA---CTAAGGGCAGATGACCCAGGATGCAGCATGGGCTGAACTTGAGTTTCTACTTGCCTTGAACAGTAAACACCCTGGACAACCATACGTGAGGACCCT------GAATCCAAAGAAA s panTro4.chr19 59900144 252 + 63644993 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTAATCATTAAAATCCTTCATCATACAAACATAAgctaccacaagcttatgtggcaattttgtgtaaataagaa--------aaagttcgttattctgactagaaacagta---ctaagggcagatgacccaggatgcagcatgggctgaacttgagtttctacttgccttgaacagtaaacaacctggacaaccatacgtgaggaccct------gAATCCAAAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829780 253 + 60714840 GACATCCAGAAATGTAACCTTGCGATATCTCGGGTATATCTCTTTAATCATTAAAATGCTTCATCATACAAAC--Aggccaccacaagcttatatggcaattttgtgtaaataagaa--------aaagTTCGTTATTCTGACTAGAAACAGTA---CTAAGGGCAGATGACCCGGGATGCAGCATGGGCTGAACTTGAGTTTCTACTTGccttgagcagtgaacaacctggacaaccatacgtgaggaccct------gAATCCAAAGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342882 249 - 106955855 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATGTC-TTAATCATTAAAATCCTTCATCATACAAAC---AGCTACCACAAGCTTATATGGCAATTTTGTATAAACaagaa--------aaagttcattattctgactagaaacagta---ctaagggcagatgacccaggatgcagcatgggctgaacttgggtttctacttgccttgagcagtaaacaacctggacaaccatatatgaggaccct------gAATCCAAAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640090 249 + 64156825 GACACCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTCATCGTTAAAATCCTTCGTCCTACGAAC---AGCTACCACAAGCTTTTGTGGCAATTTTGTGTAAATGAGAA--------AAAGTTTGTTATTCTGACTAGAAACAGTA---CTAAAGGCAGATGACCCAGGAGACAGCATGGGCTGAACTTGAGTTTCTACCTGccttgagcagtaaacaacctggacaaccatacgtgaggaccct------gAATCTGAGGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781239 249 + 59248254 GACACCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTCATCGTTAAAATCCTTCGTCATACGAAC---Agctaccacaagcttatgtggcaattttgtgtaaatgagaa--------aaagtttgttattctgactagaaacagta---ctaaaggcagatgacccaggagacagcatgggctgaacttgagtttctacctgccttgagcagtaaacaacctggacaaccatacgtgaggaccct------gAATCTGAGGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885406 254 + 51301725 GACACCCAG-AATGTAACC-TGCGATATTTCGGGTATATCTC-TTCATCGTCAAAATCCTTCGCCATACAAAC---AGCCGCCACAAGCTCATGTGGCAATTTTGTGTGAATG-GGA--------AAAGTCCGTTATTCTGACTAGAAACAGTA---CTAAAGGCAGATGACCCAGGAGACAGCATGGGCTGAACTCGAGTTTCTACTTGCCTTGAGCAGTAAACAACCTGGACAACCATACGTGAGGACCCTGAATCCGAATCCGAGGAAA i papAnu2.chr19 M 50 C 0 s chlSab2.chr6 47593198 249 + 50890351 GACACCCAG-AATGTAACC-TGCGATATCTTGGGTATATCTC-TTCATCATTAAAATCCTTCGTCATACAAAC---Agctaccacaagcttctgtggcaattttgtgtaaatgaaaa--------aaagttcgttattctgactagaaacagta---ctaaaggcagatgatccaggagacagcatgggctgaacttgagtttctacttgccttgagcagtaaataacctgggcaaccatacatgaggaccct------gAATCCGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948139 245 + 49145316 GGCACCCAA-AATGTAACC-TGCAGTATCTCGGGTACACCTC-TTCGTCATGAAAACCCTTCCTCATACCAGC---Agctaccac-agcttatacggcaattttgtgtcaattagga--------aaagttggtga--ctgactagaaacagta---ttaagggcagatgtcccaggatacagcatgggttgaacttgagtttccacttg-cttgagcagtgaacaacctggacaaccatacgtgaggaccct------gAGTCCAGAGAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051232 262 - 122678785 GACACCCAA-AATGTAATC-TGCAATACCTCAGGTATATCTC-ACCATCACTGAAAACTTCCAGCATGTGAAC-AGAGTTCCTACAAGCCTATATAGCAATTTTGAATAAAGTAGGAGGGGTGGGGAAATCCCTTATTCTGATTAGAAACTGTACTCCTCCAGGCACATGCCACAGAACAGAAAATGGGCTAGACTTTAGTTTCCCCTTGTACTGATCATTGAGCAACCTGGGCAACCATCCACAACAGGCCT------GAGTCCAAAAAAA i canFam3.chr1 C 0 I 20 a score=762651.000000 s hg38.chr19_GL949748v2_alt 966522 323 + 1064304 CTCCCAGAATC---TTTATC---------ATCttttttttttttttt-------------atgaagtcttgctctgttgcccaggccaaagtgcaatggcacgatcttggctcactgcaacctctgtctcctgggttcaagtaattctgctgcctcagcctcccaagttgctgggattacaggcacccgccaccacgcccggctaatttttgtgcattt-------------agtggagctggtttcgccaca-ttgccaggctgg-------------------------------tctcgaactcatgacctcaggtgacctgccctcctc-aggctcccaaagtgctgggattataggcatgagccaccatgcccagccAGAGTCCTTATG s panTro4.chr19 59900396 327 + 63644993 CTCCCAGAATC--ttttatc---------atcttttttttttttttttt----------aatggagtcttgctctgttgaccaggccaaagtgcaatggcacgatcttggctcactgcaacctctgtctcctgggttcaagtaattctgctgcctcagcctcccaagttgctgggattacaggcacccgccaccatgcccagctaatttttgtgcattt-------------agtggagctggtttcgccaca-ttgccaggctgg-------------------------------tctcgaactcatgacctcaggtgacctgcccccctc-aggctcccaaagtgctgggattataggcgtgagccaccatgcccagccAGAGTCCTTATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830033 333 + 60714840 CTCCCAGAATC---tttatc---------ttcctttttttttttttttt----ccttcagatggagtcttgctctgttgcccaagccgaagtgcagtggcacgatcttggctcactgcaacatctgcctcccaggttcaagtaattctgctgcctcagcctcccaagtagctgggattacaggcacccgccaccatacctggctaatttttgcgctttt-------------agtagagatggtttcgccaca-ttgccaggctgg-------------------------------tcttgaactcatgacctcagatgacctgccccccccgaggctcccaaagtgctgggattatagacgtgagccaccatgcccagccAGAGTCCTTATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343131 337 - 106955855 CTCCCAGAATC---TTTATC---------ttctttttttttttttttttttttccttcagatggagtcttggtctgttgcccaggccgaagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagtaattctgctgcctcagcctcccaagtagctgggatcacaggcacccgccaccacacctggctaatttttgtgctttt-------------agtagagatggttttgccacg-ttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccccctgaggctcccaaagcactgggattataagtgtgagccactatgcccagccAGAGTCCTTATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640339 317 + 64156825 TTCCCAGAATC---tttatc---------------tttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtacgatggcacaatcttgactcactgcaacctctgcccctcgagttcaactaatt---ctgcctcagcctcgcaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgttttggcacatttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccctctcaggctcccaaagtgctgggattataggcgtgagccactgtgcccagccAGAATCCGTATG i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55781488 317 + 59248254 TTCCCAGAAtc---tttatc---------------tttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtacgatggcacaatcttgactcactgcaacctctgcccctcgagttcaagtaatt---ctgcctcagcctcgcaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgttttggcacatttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccctctcaggctcccaaagtgctgggattataggcgtgagccactgtgcccagccAGAATCCTTATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885660 319 + 51301725 TTCCCAgagtc---tttatc------------ttttttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtACGATGGCACAATctttactcactgcaacctctgcccctcgggttcaagtaatt---ctgcctcagcctcccaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgtttCGGCACATttgccaggctgg-------------------------------tattgaactcatgacctcaggtga-ctgccccctctcaggctcccaaagtgctggcattataggcgtgagccaccgtgcccagccagaatccttatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593447 331 + 50890351 TTCCCAGAATC---TTTTGCtttttttttttttttttttttttttttgt---------agatgaagtcttgccctgttgcccaggccaaagtgcaatggcatgatcttgactcactgcaacctctgcctccagggttcaagtaatt---ctgcctcagcctcccaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagact-tgtcggcacatttgccaggctgg-------------------------------tattgaactcatgacctcaggtgacctgccccctctcagcctcccaaagtgctgggattataggtgtgagccaccgtgcccagccAGAATCCTTATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948384 354 + 49145316 CTCCCAGAATCATCTTTACC---------tttttttttttttttttttt-----tttgagatgga----------gttgtccaggctggaatgcagtggcatgatctcagctcactgaaacctctgcctcccatgttcaagcaattctcctgcctcagcctcccaagtagctgagattacaggtgcctgccaaaacacccagctaacttttgtgcttttttttttcttttgaggcggag----tcttgctctg-tcaccaggctggaatgtggtagtgcaatcttggctcaccgcaacctctgcctcctgggttcaagtga-ttctcctgtctcagccttctgagtagctgggactgcagatatgaaccaacatgcccagctaa---------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I a score=-2283.000000 s hg38.chr19_GL949748v2_alt 966845 31 + 1064304 TTTTGGTTTTGGTTTTGGttttttctttt------tc s panTro4.chr19 59900723 29 + 63644993 TTTTGGTTTTGGttttttctttttctttt-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830366 23 + 60714840 TTTTGGttttggt------tttttctttc-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343468 37 - 106955855 TTTTGGTTCTGGTTTTTTCTTTTCCTTTTtttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55781805 8 + 59248254 -------------TTCCCttt---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885979 16 + 51301725 -------------ttcccttttttttttt-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593778 24 + 50890351 -------------TTCCCTttttttttttgttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948738 5 + 49145316 -------------------ttttt------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I e rheMac3.chr19 60640656 7 + 64156825 I a score=88794.000000 s hg38.chr19_GL949748v2_alt 966876 33 + 1064304 ttttttctttttgagatggagtctcgctctgtc s panTro4.chr19 59900752 33 + 63644993 ttctttttttttgagatggagtctcgctctgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830389 33 + 60714840 ttttttttttttgagatggagtctcgctctgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343505 33 - 106955855 ttttttttttttgaaatggagtctcactctgtc i nomLeu3.chr10 C 0 M 613 s rheMac3.chr19 60640663 33 + 64156825 ttttttttttttgagatggagtcttgctctgtc i rheMac3.chr19 I 7 C 0 s macFas5.chr19 55781813 33 + 59248254 ttttctttttttgagatggagtcttgctctgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885995 33 + 51301725 ttttttttttttgagatggagtcttgctctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593802 33 + 50890351 tgttttttttttgagatggagtcttgctctgtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948743 33 + 49145316 gtatttttagtagagatggagtttcaccatgtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I a score=408333.000000 s hg38.chr19_GL949748v2_alt 966909 221 + 1064304 acccaggctggagtgcgttggtatgatctcaggtcactgcagcctccacctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcacaccaccacacctggttaa-tttttgtattattagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatctacccccc-cacccccacc s panTro4.chr19 59900785 221 + 63644993 accaaggctggggtgcaatggtatgatctcaggtcactgcagcctccacctcccaggttgaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcataccaccacacctggttaa-tttttgtattattagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatccacccgcc-cacccccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830422 216 + 60714840 acccaggctggagtgcaatggtataatctgagctcactgcagcctccacctaccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcacaccaccacacctggttaa-tttttgtattcttagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatccacc--cc-caccccc--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640696 211 + 64156825 tcccaggctggagtgcaatggcatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcatcagcctcctgagtagctgggagtac--aagcacgcgccaccatacctggttga-tttttgtattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781846 211 + 59248254 tcccaggctggagtgcaatggtatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctggttaa-tttttgcattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886028 211 + 51301725 tcccaggctggagtgcaatggtatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctggttaa-tttttgtattcttagtagaaatagggttttatcacattggccaagctggtctcgaactcatgaccccaggtgatccatcctcc----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593835 211 + 50890351 tcccaggctggagtgcaatggtatgatctccgctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctagttaa-tttttgtattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948776 193 + 49145316 ggccaggctg-------------------------------atctcgaactcctgacctccaatgacccacccaccttggccttcaaaat-gctgggattaccaaagtgtgagccactgcgcctggctgattttttgtatttttagtagagacagggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatctgctcacctcagccttacc i calJac3.chr22 C 0 N 0 e canFam3.chr1 20051494 20 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=92288.000000 s hg38.chr19_GL949748v2_alt 967130 61 + 1064304 ccaccccgccgtcggcctcccaaagtgaggcatgagccaccgtgcccagccCAGAATCTTT s panTro4.chr19 59901006 61 + 63644993 ctaccccgccgtcggcctcccaaagtgaggcgtgagccaccgtgcccagccCAGAATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830638 50 + 60714840 -----------ccggcctcccaaagtggggtgtgagccaccgtgcccagccCAGAATCTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640907 50 + 64156825 -----------tcggcctcccaaactggggcgtgagccaccgtgcccagccCAGAATCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782057 50 + 59248254 -----------tcggcctcccaaagtggggcgtgagccaccgtgcccagccCAGAATCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886239 50 + 51301725 -----------tcggcctcccaaagtggggcgtgagccactgtgcccggcccagaatcTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594046 50 + 50890351 -----------tcggcctcccaaagtggggcgtgagccaccgtgcccggccCAGAATCTTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=472308.000000 s hg38.chr19_GL949748v2_alt 967191 242 + 1064304 ATCTTCTATCAGAGATCATTCACTCATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTGTCCA-GTGGCTGCCCAGGCGATGAGAACCTACATGCATCATGGGGTTCCATGAAGCCTCACTTGGCCACACTGGTGTAGTAGG s panTro4.chr19 59901067 240 + 63644993 ATCTTCTCTCAGAGATCATTCACTCATGGTTCATGCTT---CTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTGTCCACGTGGCTGCCCAGGTGATGAGAACCTACATGCGTCATGGGGTTCCATGAAGCCTCACTTGGCCACACTGGTGTAGTAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830688 235 + 60714840 ATCTTCTATC--AGATCATTCACTCATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTA--TTGAGAGCTCTCCCCTTGGGAAGCTGTCCACGTGGCTGCCCAGGTGATGAGAACCATCATGCA----AGGAGTTCATGAAGCCTCACTTGGCCACATTGGTGTAGTAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640957 241 + 64156825 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCT-CTTTATGATGATTCAGAATACCGGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTCCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCGTCATGTGTCATGGGGTTCCGTGGAGCCTCACTTGGCCACACTGGCATAGTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782107 242 + 59248254 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTGCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCATCATGTGTCATGGGGTTCCGTGGAGCCTCACTTGGCCACACTGGCATAGTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886289 242 + 51301725 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACTTTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCATCATGTGTCATGGGGTTCCATGGAGCCTCACTTGGCCACACTGGCATAGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594096 241 + 50890351 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCGGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACAGCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGAT-GGAACCATCATGTGTCATGGGGTTCCATGGAGCCTCACTTGGCCACACTGGCATAGTAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20051514 246 - 122678785 ATCCTCTATCAGAGAGAATTGGTTTATGGTT--TGTTTCTCCTGTC--ATGATTCAGAATACCAGATTCTGTCCAGTATCCTCTGTCCAGGCAAAGATACTTTGGGAGCAACAGATTTTCCTTCTCTTGGTAGTCCTCTGGGTTGAAAGATCTCCCCTTGGGATATTCTCCACATGATAGCTCTGGTGAGTATTGTCATTACTCATCATGGGGTTCCATTGATCCTCGCTTGACCACATTTG-ATAATAGG i canFam3.chr1 I 20 I 2524 e nomLeu3.chr10 103343538 613 - 106955855 M a score=83448.000000 s hg38.chr19_GL949748v2_alt 967433 53 + 1064304 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacgcctg s panTro4.chr19 59901307 53 + 63644993 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830923 52 + 60714840 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacg-ctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60641198 51 + 64156825 TGGTCACTGGCCTC--ATTGTTCCCCTGggccaggcacagtaggtcacgtctg i rheMac3.chr19 C 0 I 347 s macFas5.chr19 55782349 51 + 59248254 TGGTCACTGGCCTC--ATTGTTCCCCTGggccaggcacagtaggtcacgtctg i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47886531 53 + 51301725 TGGTCACTGGCCTCAAATTGTTCCCCTGGGCCAAACACAGTAGGTCACgcctg i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47594337 53 + 50890351 TGGTCACTGGCCTCAAATTGTTCCCCTGggccaggcacagtaggtcacgcctg i chlSab2.chr6 C 0 I 16 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=462741.000000 s hg38.chr19_GL949748v2_alt 967486 383 + 1064304 ggaggccgaggtgggtggatcacttgaggtcaggagttcaagaccggcctggtcaacatggtgaaactctgtctctactaataatacaaaaa-----ttagctgggcatgttggcgcacgcctgtagtcccagctactcaggaggctgaggcaggagcatcatttgaacctgagaggcggaggttgcagtgagctgagatcacaccaccgcactccagtctgggcaacagtgtgagactgtctc-----------aaaaaaaaaaaaaaaaaTCTTggctgggtgcggtagctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaacatggtgaaaccccacgtctactaaaaa s panTro4.chr19 59901360 386 + 63644993 ggaggccgaggtgggtggatcacttgacgtcacgagttcaagaccggcctggtcaacatggtgaaactctgtctctactaataatacaaaaa-----ttagctgggcatgtttgcgcacacctgtagtcccagctactcaggaggctgaggcgggagcatcatttgaacctgagaggcggaggttgcagtgagctgagatcacaccaccgcactccagtctgggcaacagtgtgagactgtctcaa--------aaaaaaaaaaaaaaaaaaaCTTggctgggtgcggtagctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatgtctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830975 398 + 60714840 ggaggccgaggcgggtggatcacttgaggtcaggagttcaagaccagcctggtcaacatagtgaaaccccgtctctactaataatacaaaaattagcttagctgggcatgttggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcatttgaacctgagaggcggaggttgccgtgagctgagatcacaccaccgcactccagcctgggcaacagtgtgagactgtctcaaaaataaataaataaataaataaaGAGTCTTggccgggtgcggtggctcatgcctgt-atcccagcactttgggaggccaaggtgggtggatcac--gaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatgtctactaaaaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55782416 386 + 59248254 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccagcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcgaggcgtgttggcacacgcctgtggtcccagttactcaggaggcggaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcgcaccactgcactccagcctggtcaacagtgcgagactatctca---------aaaaaaaaaaaaaaaaaaTCTTgaccgggtgcggtggctcatgcctgtaatgacagcacttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaa i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47886600 383 + 51301725 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccagcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcggggcgtgttggcacacgcctgtagtcccagttactcaggaggcggaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcacaccactgcactccagcctggtcaacagtgcgagactatctc------------aaaaaacaaaaaaaaatcttggccgggtgcggtggctcatgcctataatcccagcacttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccggtctggccaacatggtgaaaccccatctctactaaaaa i papAnu2.chr19 I 16 C 0 s chlSab2.chr6 47594406 385 + 50890351 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccatcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcggggcgtgttggcacacgcctgtagtcccagttattcaggaggcagaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcacaccactgcactccagcctggtcaacagtgcgagactatctc----------aaaaaaaaaaaaaaaaaaTCTTggccgggtgcggtggctcatgcctataatcccagcatttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaa i chlSab2.chr6 I 16 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M e rheMac3.chr19 60641249 347 + 64156825 I a score=266322.000000 s hg38.chr19_GL949748v2_alt 967869 152 + 1064304 tacaaaaacattagctgggcatggtggcgcgtgcctgtaatcccagctactcatggaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcacgccattgcactccagcctgggcaacagagcaaaac s panTro4.chr19 59901746 152 + 63644993 tagaaaaacattagccgggcatggtggcgcgtgcctgtaatcccagctactcgtggaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcacaccattgcactccagcctgggcaccagagcaaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56831373 149 + 60714840 tacaaaaaaattagccgggcatggtggcgcgtgcctgtaatcccagctactt---gaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcatgccattgcactccagcctgggcaacagagcaaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60641596 152 + 64156825 tacaaaaatattagccgggcatggtggcaggcgcctgtaatcccagctactcgtgggggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i rheMac3.chr19 I 347 C 0 s macFas5.chr19 55782802 152 + 59248254 tacaaaaatattagccgggcatggtggcaggcgcctgtaatcccagctactcgtgggggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtaagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886983 149 + 51301725 tacaaaaatattagccgggcatggtggcaggcacctgtaatcccagctactc---ggggctgaggctggagaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594791 152 + 50890351 tacaaaaatattagctgggcatggtggcgggtgcctgtaatcctagctactcgtgggggttgaggcaggagaattgcttgaacccaggaggcagaggttggagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=856502.000000 s hg38.chr19_GL949748v2_alt 968021 403 + 1064304 tccatctcgaggacag-aaaaaaaaTTGATTGCTCTGGCTCTACTGAT-ACAATCTTAGGCTGCTTAATGGGATCTT------AGTTGAATAGGATGCTGTACATCTTACAGGTATTGGAAGGTTG-AATGAAA------CCAAGCCCATGCATTCAATAGTGGCTGCTATCATTACTAACCGTTGCAATTACCCTCTTTTCTT-TTTGCCTGAGAATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTCACTAAtttcttt-ctttttttctcaagatatagtcttgctctgtctcctaggctggagtgcagtgccacaatcttggttcactgcaacctctgcctcccgggttcaagtgattcttctccgtcaacctcccaagtagctgggattacaggca s panTro4.chr19 59901898 406 + 63644993 tccatctcgaggacag-aaaaaaaaTTTATTGCTCTGGCTCTACTGAT-ACAATCTTAGGCTGCTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATTGGAAGGCTG-AATGAAA------CCAAGCACATGCATTCAATAGTGGCTGCTGTCATTACTAACCGTTGCAATTACCCTCTTTTCTT-TTTGCCTGAGGATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTAACTAAtttcttt-ctttttttctcgagatatagtcttgctctgtctcctaggctggagtgcagtgccacaatcttggttcactgcaacctctgcctcccgggttcaagtgattcttctccgtcaacctcccgagtagccgggattacaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56831522 407 + 60714840 tccatctcgaggacag-aaaaaaaaTTTATTGTTCTGGCTCTACTGAT-GAAATCTTAGGCTGCTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATTTGAAGGTTG-AATGAAACCAAATCCAAGCACATGCATTCAATAGTGGCTGCTGTCATTACTAACCATTGC-ATTACCCTCTTTTCTTGTTTACATGAGAATAATGGAATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTCACTAAttt------tttttttctcgagatatagtcttgctctgtctaccaggctggagtgcagtgccacagtcttggttcactgcaacctctgcctcctgggttcaagtgattcttctccgtcaacctctcgagtagctgggattacaggcA i ponAbe2.chr19 C 0 M 186 s nomLeu3.chr10 103344151 408 - 106955855 TCCATCTTGAGGACAGAAAAAAAAATTTATTGCTCTGGCTATACTGAT-ACAATCTTAGGCTGTTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATT-GAAGGTTG-AATGAAACCAAATCCAAGCACAGGTATTCAATAGTGGCTACTGTCATTACTAACCATTACAATTACCCTCTTTTCTTTTTTACATGAGAATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTGAAGATTTGGGTCACTAAtttcttt-cttttttcctcgagatatagtcttgctctgtctcccaggc-----tgcagtgccacaatcttggttcactgcaacctctgcctcctgggttcaagtgattcttctgcgtcagcctcccaagtagctgggattacaggca i nomLeu3.chr10 M 613 C 0 s rheMac3.chr19 60641748 408 + 64156825 tccatctcaagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACGTCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTATTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAATTAAAGATGTGGGTCACTAATCTAt---ttttttttctcgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782954 407 + 59248254 tccatctcgagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACGTCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTGTTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAATTAAAGATGTGGGTCACTAATCTA----ttttttttctcgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887132 411 + 51301725 tccatctccagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACATCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTATTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGATGGGGAACATCGAGTAAATTAAAGATGTGGGTCactaatctatttcttttttttctggag--gtagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcagcctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtaactgggattacaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594943 409 + 50890351 tccatctcgagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAGTGGGATACTGTACATCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCACGTATTCAATAGTGGCTGCCGTCATCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAattacagatgtgcgtcactaatctatc--tcttttttcttgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I a score=597560.000000 s hg38.chr19_GL949748v2_alt 968424 360 + 1064304 cccacctgtatttttgtatttctagtattttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcgggcaatccaccacacccagctaa-tttttggtatatttagtagagccggggtt--tcaccgtgttggctgggctggtctcgaactcctgacctcaagtga--CATCCATCTTCCAAAATgctgggattacagccatgtgccaccacgcccagctaattcttgtatttttaggagaaatggggtttcatcatgttgttccggctggtcttaaactcctggcctcatgatccacctgccttggcctgccaaagtcctgggattacaggca s panTro4.chr19 59902304 360 + 63644993 cccacctgtatttttgtatttctagtattttgtatttctagtagagacagggttacaccatgctggtggccagggtggtctcaaactcctgacctcgggcaatccaccacacccagctaa-tttttggtatatttagtagagccggggtt--tcaccgtgttggctgggctggtctcgaactcctgacctcaagtga--CATCCATCTTCCAAAATgctgggattacagccatgtgccaccacgcccagctaattcttgtatttttaggagaaatggggtttcatcatgttgtcccggctggtcttaaactcctggcctcatgatccacctgccttggcctgccaaagtcctgggattacaggca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344559 362 - 106955855 cccggctgtattcttgtatttctaatattttgtatttctagtagagacagggttacaccatgctggtggccaaggtggtctcaaactcctgacctcaggcaatccaccacacccagctaa-tttttggtatatttagtacagccggggttaacaaacatgttggccaggctggtctcgaactcctgacctcaagtga--cacccatctTCCAAAATgctgggattacagccatgtgccaccatgcccagctaattcttgtatttttaggagaaacagggtttcatcatgttgtcctggctggtcttaaattcttggcctcatgatccacctgccttggcctgccaaagtgctcggattacaggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60642156 346 + 64156825 cccagctgtat----------------ttttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcggg-aatcccccacgcccagctaatttttttatgtctttagtagagatggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctgcctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggattacaggcA i rheMac3.chr19 C 0 M 331 s macFas5.chr19 55783361 346 + 59248254 cccagctgtat----------------ttttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcggg-AATCCCCCACGCCCAGCTAAtttttttatgtctttagtagagatggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccatctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctgcctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887543 345 + 51301725 cccagctgtat----------------ttttatatttctagtatagacagggttacaccatgctagtggccagggtagtctcaaactcttgaccttggg-aatcccccacgcccagctaa-ttttttatgtctttagtagagacggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtagtTTTAGGAGaaacgggatttcatcatgttgtcctggctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47595352 345 + 50890351 cccagctgtat----------------ttttgtatttttagtagagacagggttacaccatgctggtggccagggtagtctcaaactcctgacctcggg-aatcccccacgcccagctaa-ttttttatgtctttagtagagacggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctggctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M a score=15048.000000 s hg38.chr19_GL949748v2_alt 968784 12 + 1064304 tgagccactgtg s panTro4.chr19 59902664 12 + 63644993 tgagccactgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344921 12 - 106955855 tgagccactgtg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55783707 12 + 59248254 tgagccaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887888 12 + 51301725 tgagccaccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47595697 12 + 50890351 tgagccaccatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e rheMac3.chr19 60642502 331 + 64156825 M a score=533922.000000 s hg38.chr19_GL949748v2_alt 968796 363 + 1064304 cccagccACTCATTTCTTATGAATTTATTCTAACACATTTTCCGGATGAA--CAGGGCACCTTGAAACATAGGTTAGTGggctgggta--------tggtggctcctgcctgtaatcccagtactttgggaggcctaggctggtgtatcgcttgaagtcaggagttt---tttgttttgagacggagtcttgctctgtcgcccaggctagagtgcagtgg------------------------------agtgatctcggcttactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgggactacaggcacgtgtcgccacgcccatctaa----------cttttgtatgtttagtagagccggggtttcaccatgttggccaggatgg s panTro4.chr19 59902676 363 + 63644993 cccagccACTCATTTCTTATGAATTTATTCTAACACATTTTCCGGATGAA--CAGAGCACCTTGAAACATAGGTTAGTGggctgggta--------tggtggctcctgcctgtaatcccagtgctttgggaggcctaggctggtgtatcgcttgaagtcaggagttt---tttgttttgaaacggagtcttgctctgtcgcccaggctagactgcagtgg------------------------------agtgatctcggcttactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgggactacaggcacgtgtcaccacgcccatctaa----------cttttgtatgtttagtagagccggggtttcaccatgttggccaggatgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344933 370 - 106955855 cctagccACTCATTTCTTATGAATGTATTCTAACACATTTTCTGGATGAA--CAGAGCACCTTGAAACATAGGTTAGTGGGCTGGGCACTGTGGGTTAgtggctcatgcctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagttt---tttgtattgagacagagtcttgctctgttgcccaggctagagtgcagtgg------------------------------agtgatctcggctcattgtaacctctgcctcctgggttccagtgattctcttgcctcagcctcccgagtagctgggactacaggcacgtgtcgccacgcccagctaa----------ttttggaatg-ttaataaaaatgggggttctccctggttgtcagactgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60642833 345 + 64156825 CCCAGCCACTCATTTCTTACGAATTTATTCTAACACATTTTCCGGATGAACACAGAGCACCTTGAAACGTAGGTTAGTGgactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcagtggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-----------------------------tcccaggttcaagca---attctgccttagcctcctgagtagttgggactacaggtgcgcgccaccacacccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i rheMac3.chr19 M 331 C 0 s macFas5.chr19 55783719 343 + 59248254 cccagccACTCATTTCTTACGAATTTATTCTAACACATTTTCCAGATGAACACAGAGCACCTTGAAACGTAGGTTAGTGgactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgcgccaccacacccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887900 374 + 51301725 cccagccactcaTTTCTTACGAATTTATTCTAACACATTTTCCGGATGAACGCAGAACACCTTGAAACGTAGGTTAGtggactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcgcccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgcgccaccacgcccagctaatttcttttcttttctttttttttttttgagacggagtctcgctctgtcgcccaggctgg i papAnu2.chr19 C 0 I 563 s chlSab2.chr6 47595709 343 + 50890351 cccagccACTCATTTCTTACGAATTTATTCTAACACATTTTCCAGATGAACACAGAGCACCTTGAAACATAGGTTAGTGgactgggca--------tggtgcctcctacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcgcccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgtgccaccacgcccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M a score=22839.000000 s hg38.chr19_GL949748v2_alt 969159 18 + 1064304 tctcaaactcctgacctc s panTro4.chr19 59903039 18 + 63644993 tctcaaactcctgacctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103345303 18 - 106955855 tcccaaactcccaacctc i nomLeu3.chr10 C 0 M 3096 s rheMac3.chr19 60643178 18 + 64156825 tctcgaactcctgacctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784062 18 + 59248254 tctcgaactcctgacctc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596052 18 + 50890351 tctcgaactcctgacctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e papAnu2.chr19 47888274 563 + 51301725 I a score=54710.000000 s hg38.chr19_GL949748v2_alt 969177 64 + 1064304 ctgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccattgccccggccA s panTro4.chr19 59903057 64 + 63644993 ccgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccattgccccggccA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60643196 64 + 64156825 gtgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784080 64 + 59248254 gtgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596070 64 + 50890351 atgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=284334.000000 s hg38.chr19_GL949748v2_alt 969241 234 + 1064304 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatacaaaaattagccaggcaagatggcatttgcctgtaatcccagctactcaggaggctgaggcgggagaatctcttgaatctgggaggcagaggttgctgtgagctgagatcgcgccactacactccagccagggcgacagagcataaataactccctttcaaaaaaccaaacaa s panTro4.chr19 59903121 234 + 63644993 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatacaaaaattagccaggcaagatggcatttgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaatccaggaggcagaggttgctgtgagctgagatcacgccactacactccagccagggcgacagagcataaataactccctttcaaaaaaCCAAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56832115 234 + 60714840 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatagaaaaattagctaggcaagatggcattcgcctgtaatcccagccactcaggaggctgaggcgggagaatctcttgaatccaggaggcagaggttgctgcgagctgagatcgcgccactacactccagccagagtgacacagcataaataactccctttcaaaaaaccaaacaa i ponAbe2.chr19 M 186 C 0 s rheMac3.chr19 60643260 229 + 64156825 aagttaggagtttgagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaaattagccaggcaagagggcacgcgtctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcagaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784144 229 + 59248254 aagttaggagtttgagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaaattagccaggcaagatggcacgcatctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcggaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596134 229 + 50890351 aagttaggagtttaagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaacttagccaggcaagatggcacgcgcctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcggaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=202859.000000 s hg38.chr19_GL949748v2_alt 969475 150 + 1064304 tgaaaCATAGGTTAGCGGAGTCTGCATCCAACATTAGAGTCAGATTGACTAAG--Ttctgtatttccagctgattcctgggcgatgttggtgccactggtct---gaccaccctttgacaactgctgCTCCAGATAATTCAAGTCGGGGTATAAC s panTro4.chr19 59903355 150 + 63644993 TGAAACATAGGTTAGCGGAGTCTGCATCCAACATTAGAGTCAGATTGACTAAG--Ttctgtatttccagctgattcctgggcgatgttggtgccgctggtct---gaccaccctttgacaactgctgTTCCAGATAATTCAAGTCGGGGTATAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56832349 148 + 60714840 tgaaaCA-----TAGCGGACTCTGCATCCAACATTAGAGTAAGATTGACTAAG--TTCTTTatttccagctgattcctgggcgatgttgatgccgctggtctggggaccaccctttgacaactactgCTCCAGATAATTCAAGTCGGGGTATAAC i ponAbe2.chr19 C 0 I 557 s rheMac3.chr19 60643489 155 + 64156825 tgaaacataggttagtggactctgcatccaacatttgagtcaggttgactgaggctcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCAGATAATTCAATTCGGGGTGTAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784373 155 + 59248254 tgaaacataggttagtggactctgcatccaacatttgagtcaggttgactgaggctcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCAGATAATTCAAGTCGGGGTGTAAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596363 155 + 50890351 tgaaaCATAGGTTAGTGGACTCTGCATCCAACATTTGAGTCAGGTTGActgaggttcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCGGATAATTCAAGTCGGGGTGCAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054284 138 - 122678785 TAAAACAGAAATCAGTGgattctgcatctggagttt------------ctgaggatt-tgtgtttctaactgcttgccagatgatgctgatgcagctggtccagggatcacactttg----ccactgCTCTATGTAATTTATTCTAGGACATGAC i canFam3.chr1 I 2524 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=49156.000000 s hg38.chr19_GL949748v2_alt 969625 56 + 1064304 ACAAC------CAGTGAGATGTAAACC-AAAGACGATTCCACG-GTTAGATTCTCAAGAATGAC s panTro4.chr19 59903505 56 + 63644993 ACAAC------CAGTGAGATGTAAACC-AAAGACGATTCCGCG-GTTAGATTCTCAAGAATGAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60643644 56 + 64156825 ATAAC------CAGTGAGATATAAATC-AAAGATGATTCCGTG-ATTAGATTCTCAAGAATAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784528 56 + 59248254 ATAAC------CAGTGAGATATAAATC-AAAGATGATTCCGTG-GTTAGATTCTCAAGAATAAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596518 56 + 50890351 ATAAC------CAGTGAGCTATAAATC-AAAGATCATTCCGTG-GTTAGATTCTCAAGAATAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054422 64 - 122678785 ATAATGTGGTAAAATGAGGGGTAAACCTGGAGACTGTATCAAGCGTTTGGTTATCAAGAATGAT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56832497 557 + 60714840 I e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=8313.000000 s hg38.chr19_GL949748v2_alt 969681 7 + 1064304 TTGTTCT s panTro4.chr19 59903561 7 + 63644993 TTGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833054 7 + 60714840 TTGTTCT i ponAbe2.chr19 I 557 C 0 s rheMac3.chr19 60643700 7 + 64156825 GTATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784584 7 + 59248254 GTATTCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596574 7 + 50890351 GTATTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054486 7 - 122678785 GTGTTCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=211631.000000 s hg38.chr19_GL949748v2_alt 969688 162 + 1064304 ---------gccgggcgcggtggctca-cgcctgtcatcccagcactctgggaggccgaggtgggcagatcacctgagattgggagtttgagaccagcctgaccaacatggagaga--cccccacctctactgaaaatacaaaattagctgggcatgttggtgcatggtgcatg s panTro4.chr19 59903568 157 + 63644993 ---------gccgggcgcggtggctca-cgcctgtcatcccagcactttgggaggccgaggtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacatggagagacccccccacctctactgaaaatacaaaattagctgggcatg-----gc--ggtgcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833061 154 + 60714840 ---------gccgggcgcagtggctcg-cgcctgtcatcccagcactttgggaggccgaggtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacatggagaga---ccccacctctactgaaaatacaaaaatagctgggcatg-----gt--ggtgcatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60643707 154 + 64156825 ---------gctgggcacgctggctta-cgcctgtaatcccagcacgttgggagaccaaggcaggtggatcgcctgaggtcaggaggtcgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccaggcgtg-----gt--ggtgcatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784591 154 + 59248254 ---------gctgggcacgctggctta-cgcctgtaatcccagcacgttgggagaccaaggcaggtggatcgcctgaggtcaggaggtcgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccaggcgtg-----gt--ggtgcatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3467929 142 - 51301725 ---------gccaggtgtggtggctca-cacctgtaatcccagcactttgagaggccgaggtgggtggattacctgaggtcgggagttcaagaccagcatggtcaacatggtgaaa---tcccatctctactaaaaatacaaaa------------a-----tt--ggcgtgtg i papAnu2.chr19 I 48039 C 0 s chlSab2.chr6 47596581 154 + 50890351 ---------gctgggcacgctggctaa-cgcctgtaatcccagcacgatgggagaccaaggcaggtggatcgcctgaggtcaggagtttgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccgggcgtg-----gt--ggtgcatg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054493 106 - 122678785 gggatccctgggtggcgcagtggtttagcgcctgc----------ctttg---gcccagggcg---cgat--cctggagacctgggatcgaatcc-----------catgttgggc---tcccggtgc----------------------------------at--ggagcctg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M a score=11228.000000 s hg38.chr19_GL949748v2_alt 969850 4 + 1064304 cctg s panTro4.chr19 59903725 4 + 63644993 cctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833215 4 + 60714840 cctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654594 4 + 106955855 cctg i nomLeu3.chr10 I 3527 C 0 s rheMac3.chr19 60643861 4 + 64156825 cctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784745 4 + 59248254 cctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3468071 4 - 51301725 cctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596735 4 + 50890351 cctg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054599 4 - 122678785 cttc i canFam3.chr1 C 0 I 84 a score=166148.000000 s hg38.chr19_GL949748v2_alt 969854 83 + 1064304 cagtcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgctgtgagccgagat--------tgcgcc-----------a s panTro4.chr19 59903729 83 + 63644993 cagtcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgctgtgagccaagat--------tgcgcc-----------a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833219 83 + 60714840 cagtcccagctactcgggaggctgaggcaggaatatcagttgaacccaggaggcagaggttgctgtgagccgagat--------cgcgcc-----------a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654598 94 + 106955855 tcatcccagctacttgggaggctgaggcagaagaatggcttgaacccgggaggcggaggctgcagtgaggtgagat--------cacacctttgcactccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60643865 91 + 64156825 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctatgagctgagactgccattgcattcc-----------a i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55784749 91 + 59248254 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctgtgagctgagactgccattgcattcc-----------a i macFas5.chr19 C 0 I 1 s papAnu2.chr19 3468075 83 - 51301725 taatcccagctgcttgggaggctgaggcaggagaattgcttgaacccgggaggtggaggctgcagtgaggtgagat--------cacgcc-----------a i papAnu2.chr19 C 0 I 6558 s chlSab2.chr6 47596739 83 + 50890351 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctgtgagccgagac--------tgtgcc-----------a i chlSab2.chr6 C 0 I 11 e canFam3.chr1 20054603 84 - 122678785 I a score=55278.000000 s hg38.chr19_GL949748v2_alt 969937 37 + 1064304 cctgggcaacaagagtgagactcagtctc----------aaaaa----aaa s panTro4.chr19 59903812 31 + 63644993 cctgggcaacaagagtgag----agtctc------------aca----aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833302 47 + 60714840 cctgggcaacaagagtgagactcagtctcaaaaaaaaaaaaaaa----aaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654692 42 + 106955855 actgggcaac-agagtgaaactctgtctc----aaaaaaaaaaa----aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60643957 42 + 64156825 cctgggcaacaagagtgagactccgtctc---------aaaaaaaaacaaa i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55784841 38 + 59248254 cctgggcaacaagagtgagactccgtctc---------aaaaaa----aaa i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47888837 38 + 51301725 cctgggcaacaagactgagactccgtctc---------aaaaaa----aca i papAnu2.chr19 I 563 C 0 s chlSab2.chr6 47596833 35 + 50890351 cctgggcaacaagactgagactccgtcac---------aaaaaa------- i chlSab2.chr6 I 11 C 0 e canFam3.chr1 20054603 84 - 122678785 I a score=49099.000000 s hg38.chr19_GL949748v2_alt 969974 30 + 1064304 aaaaaaaaTG------------ACGTGGTCCT------------ATTTCTCCCA s panTro4.chr19 59903843 30 + 63644993 aaaaaaaaTG------------ACGTGGTCCT------------ATTTCTCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833349 30 + 60714840 aaaaaaaaTG------------ACTTGGTCCT------------ATTTCTCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654734 54 + 106955855 aaaaaaaaGGCTGATAGGGTGTACTCTGTCCTCCCAGAAGAATGACTTTTCCCA i nomLeu3.chr10 C 0 I 1131 s rheMac3.chr19 60643999 30 + 64156825 aaaacaaaaa------------aCTTGTTCCC------------ATTTCTCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784879 30 + 59248254 aaaaaaaaaa------------aCTTGTTCCC------------ATTTCTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47888875 30 + 51301725 caacaaaaaa------------acttgtTCCC------------ATTTCTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596868 23 + 50890351 -------aaa------------aCTTGTTCCC------------ATTTCTCCCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054687 30 - 122678785 AAAAAAAATA------------ATGTGTTCCC------------ATTCTTCTGG i canFam3.chr1 I 84 C 0 a score=401368.000000 s hg38.chr19_GL949748v2_alt 970004 168 + 1064304 CAGGTTGGTGTCTTGTTCCGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCTTTCTGCAGAG s panTro4.chr19 59903873 168 + 63644993 CAGGTTGGTGTCTTGTTCCGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCTTTCTGCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833379 168 + 60714840 CAGGTTGGTGTCTTGTTCCACTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCCTTCTGCAGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644029 168 + 64156825 CAGGCTGGTGTCTTGTTCTGCTACCACCCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAGTGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784909 168 + 59248254 CAGGCTGGTGTCTTGTTCTGCTACCACCCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47888905 168 + 51301725 CAGGCTGGTGTCTTGTTCTGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGACACCCAAAGTGCTTCCTGCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596891 168 + 50890351 CAGGCTGGTGTCTTGTTCTGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054717 168 - 122678785 CAGGTTGGTATCTTGTTCTGCCACCACTCAGCAATGGGCCCATCTCTCCTCCTCCCTCAAAATCAACCAGTCCCTGACATGCCTGAACCTCACAGCCAATGAGCTCCCAGATGAGAGTGCCAAGTTGCTGTGCACAACTCTGAGACACCCAAAATGCTTCCTGCAGAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3654788 1131 + 106955855 I a score=1199461.000000 s hg38.chr19_GL949748v2_alt 970172 486 + 1064304 GTTGTCGTAAGTCTCTCC-TCTCTTAC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAAT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATTTTGTTCTTCTCTCATTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAAGGTGGGGAGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGACCTGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------TAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTGTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGAATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT s panTro4.chr19 59904041 485 + 63644993 GCTGTCGTAAGTCTCTCC-TCTCTTCC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAAT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG--TCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATTTTATTCTTCTCTCATTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAAGGTGGGGAGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------TAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTCTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGAATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833547 486 + 60714840 GTTGTCGTAAGTCTCTCG-TCTCTTCC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAGT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATCTTGTTCTTCTCTCTTTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAGGGTGGGGGGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTCTG--------CAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTCTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGGATACAGGGGTGGAGTTGCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644197 482 + 64156825 GTTGTCGTAAGTCCCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-GTCTGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGCAACCTCTCGCTGATGTGAACAGCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCCTTCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCATGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTTTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785077 482 + 59248254 GTTGTCGTAAGTCTCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-GTCGGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGCAACCTCTCGCTGATGTGAACACCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCCTTCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCATGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889073 482 + 51301725 GTTGTCGTaagtctctccttttcttcc--agaGCAGCTGTGGTTTCG-ATCTGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGGAACCTCTCGCTGATGTGAACACCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCATGCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597059 482 + 50890351 GTTGTCGTAAGTCTCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-ATCTGGGGCCATA----GACAGGGAGT-GGTCACGCCTGACTTGGCTG---------TTTGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCATGCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CCGGCATT--TGGAGATAGCCGAGAGGGTTGAA-GTTGGAAATGTC--CACCGTGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAATTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 0 489 + 138250 GTTGTCGTAAGTGTCT---TCTCTT-C--AGAGCAGCTGTGGTTTCC-GTCTGGGGCGGTA----GATGAGAAAC-GGTCATGGCTGGCTTGGCTG---------TGTGGAGCCCCTCGCTGATAGGAACCCCTG-TTCCCATGTTGAGATCTGGACAGATGGCTTCTCAGTCTTGTTCTTCTCTCGTTCCTCCTCCTTCAGATGATCACCAGGGTGTGAGAGAGGGTGGGGAGTT--------------------------------CACGAGAA-GGGCTTTGGGATG------CTAGCGTT--TGGAGATGGCCGAGAAGGCTGAA-ATTGGAAATGTC-TCACCATGTTGCCATT--TGTGATTCTTTTGTTCTAACACAGGTTGGAAAACTGTCACCTTACAGAAGCTGATTGCAAGGACCTGGCTGCCGTTTTGGTTGTCAGCCGGGAGCTGATGCACCTGTGCTTGGCCGAAAACCCCCTCGGGGATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGTTACCCCGAGTGTAAACTACAGACCCTGGT i calJac3.chr22_GL285922_random N 0 I 8 s canFam3.chr1 20054885 543 - 122678785 ACTGTCGTAAGTACTGCC-TCTCTCCCTGGGAGCATCTCTTTTCCTATGTTTGGGGCCACATAGGGAAGAGCAGTGGGTAAAATCTGGATTTGCTGGACTACCCATATGGGACCTCCTACTGATGTGGACACCTGGTTCCCATTTCTGGTCCCAGGTATGTGGCTCATGCATCTTATCATTCCCTCATCCTTCCTTCATGATTGAGTGTTAAGCACATGATGAGAgctatagagctatagatgctatagatgagctatagatgTTAAGCACAAGATGAGCCAT--AGATGGGGCCTCTGGCCTT--TAGGGACAGCCAAGAAAATTGGGTTTTGGAAATGTTCTCACCCTCTTACCATTTGTGTGGTGCTTTGG--------CAGGTTGGAAAACTGTCAACTTACAGAAGCCTGTTGCAAAGAGCTCTCTTCAGCTTTGATTGTCAACCAGAGGCTGACGCACCTGAGTTTGGCAAAGAACACTCTGGGAGATGATGGGGTAAAGCTTCTGTGTGAAGGCTTGAGTTACCCTGACTGTCAACTACAGATGCTGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3654788 1131 + 106955855 I a score=146230.000000 s hg38.chr19_GL949748v2_alt 970658 86 + 1064304 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTGTGCGTGGGTGTATATGCACACGCCCCCCAC-------------CTCCGGGTTTGAGTAGGGTGGTTATGAGAACA s panTro4.chr19 59904526 86 + 63644993 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTTTGCGTGGGTGTATATGCACACACCCCCCAC-------------CTCCGGGTTTGAGTAGGGTTGTTATGAGAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834033 86 + 60714840 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTGTGCGTGGGTGTATATGCACACACCCCCCAC-------------CTCCGGGTTTGAGTAGGGTGGTTATGAGAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3655919 77 + 106955855 GTAAGTCCCtgttgggggt----------------------------------------------------g--tgtgtgtgtgtgtgtatgtgtgtgCAC----------------------GTGAATTCAAGCAGGAGAGAGATGAAAGTA i nomLeu3.chr10 I 1131 C 0 s rheMac3.chr19 60644679 125 + 64156825 GTAAGTCTGCACTGGCtgc------------gtgtgtgtgtgtgtgtgtgtgtgtgtacatagctggctgcc--tgtgtgtgtgtgtgtatgtACATA-GCCCCCCAC-------------CTCTGGGTTCTAGTAGGGTGGTTATGAGAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785559 139 + 59248254 GTAAGTCTGCACTGGCTGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtACATAGCTGGCTGCCtgtgtgtgtgtgtgtgtatgtACATA-GCCCCCCAC-------------CTCTGGGTTCTGGTAGGGTGGTTATGAGAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889555 83 + 51301725 GTAAGTCTGTGCTGGctgc----------------------------------------------------c----tgagtgtgtgtgtgtgtacata-gtcCCCCAC-------------CTCCAGGTTCTAGTAGGGTGGTTATGAGAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597541 83 + 50890351 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C----TGTGTGTGTGTGTATGTACATA-GCTCCCCAC-------------CTCCGGGTTCTAGTAGGGTGGTTATGAGAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 497 96 + 138250 CCAAGTCCCTGCTGACTGC----------------------------------------------------C--TGTGTGCGTGGATGTATATGCATA---CCCCCATGCGCACACACACACGCTGGGTTCGAGTACGGTGTTTATAAGAATA i calJac3.chr22_GL285922_random I 8 I 317 s canFam3.chr1 20055428 64 - 122678785 GTAAGTCCATGCTAGTTAT----------------------------------------------------T----------TGTGTGCATGTGCATA-------------------------CTGGATTCAAGTAGCACAGATGCAAGCA-- i canFam3.chr1 C 0 C 0 a score=38330.000000 s hg38.chr19_GL949748v2_alt 970744 16 + 1064304 C---TTAAT---TCCTCTAAAA s panTro4.chr19 59904612 16 + 63644993 C---TTAAT---TCCTCTAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834119 16 + 60714840 C---TTAAT---TCCTCTAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3655996 19 + 106955855 CTTGTTAAT---TCATTTCAAA i nomLeu3.chr10 C 0 n 0 s rheMac3.chr19 60644804 16 + 64156825 C---TTAAT---TCCTCTAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785698 16 + 59248254 C---TTAAT---TCCTCTAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889638 16 + 51301725 C---TTAAT---TCCTCTAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597624 16 + 50890351 C---TTAAT---TCCTCTACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 910 16 + 138250 C---TTAAT---TTCTCTCAAT i calJac3.chr22_GL285922_random I 317 C 0 s canFam3.chr1 20055492 19 - 122678785 ---TTTAATAGCTTCTCTGAAT i canFam3.chr1 C 0 C 0 a score=67997.000000 s hg38.chr19_GL949748v2_alt 970760 31 + 1064304 GTTCCAAGCATGATGCTAATG---ACAACTGGTA s panTro4.chr19 59904628 31 + 63644993 GTTCCAAGCATGATGCTAATG---ACAACTGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834135 31 + 60714840 GCCCCAAGCATGATGCTAATG---ACAACTGGTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644820 34 + 64156825 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785714 34 + 59248254 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889654 34 + 51301725 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597640 31 + 50890351 GCCCCAAGCATGATGCTAATGGTtagtagta--- i chlSab2.chr6 C 0 I 17 s calJac3.chr22_GL285922_random 926 34 + 138250 GCTCCAAGCATGATGCTAATGTTTATAACTGGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20055511 30 - 122678785 ACCCCAAGTATGATACTGAC----AGATCTGATG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3656015 0 + 106955855 I a score=58567.000000 s hg38.chr19_GL949748v2_alt 970791 28 + 1064304 AGACCTGGGTAGATGATGGTAGGAAAAA s panTro4.chr19 59904659 28 + 63644993 AGACCTGGGGAGATGATGGTAGGAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834166 28 + 60714840 AGACCTGGGGCGATGATGATAGGAAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644854 28 + 64156825 AGATCTGGGGAGATGGTGATAGGAAAAA i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55785748 28 + 59248254 AGATCTGGGGAGATGGTGATAGGAAAAA i macFas5.chr19 C 0 I 37 s papAnu2.chr19 47889688 28 + 51301725 AGATCTGGGGAGATGGTGATAGGaaaaa i papAnu2.chr19 C 0 I 7 s calJac3.chr22_GL285922_random 960 28 + 138250 AGACCTGGGGAGACGATGATAGGAAAAA i calJac3.chr22_GL285922_random C 0 I 6 s canFam3.chr1 20055541 28 - 122678785 AGACCTGGCAAGAGGATGTTAAAAAAAA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3656015 0 + 106955855 I e chlSab2.chr6 47597671 17 + 50890351 I a score=112972.000000 s hg38.chr19_GL949748v2_alt 970819 72 + 1064304 agtataagtagtagtaga-gt-----------------------------agtagtaataTTCTATAGGGATTTGGGGAATGTAGCTGGTTTTCGGG---------TTTTT s panTro4.chr19 59904687 65 + 63644993 AGTATAAGTAGT-----A-GT-----------------------------AGTAGTAAT-TTCTATAGGGATTTGGACAATGTAGCTAGTTTTCAGG----------GTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834194 76 + 60714840 AGTATAAGTAGT-----A-GT-----------------------------AGCAGTAATATTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGGGTTCtttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644901 70 + 64156825 agtagtagtagt-----a-gt-----------------------------agtagtaataTTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGG------GTTTTTTT i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55785813 70 + 59248254 agtagtagtagt-----a-gt-----------------------------agtagtaATATTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGG------GGTTTTTT i macFas5.chr19 I 37 C 0 s papAnu2.chr19 47889723 70 + 51301725 agtagtagtagt-----a-gt-----------------------------agtagtaatatcCTATAGGGATTTGGAGAACGTAGCTGGTtttcagg------ggtttttt i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47597688 48 + 50890351 agtagtagtagt-----a-gt-----------------------------agtagtaATATTCTATAGGGATTT----------------------G------GTTTTTTT i chlSab2.chr6 I 17 C 0 s calJac3.chr22_GL285922_random 994 87 + 138250 AGAAGTAGTAGT-----A-GTATAAAAAAAGAAGAAAATGAAAATAAAAAAGTAGTAATATTCTGTAGGGATTTGGAGGATGTAGCTG--------G----------tttt i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20055569 66 - 122678785 --AAAAAGCAAG-----ACAT-----------------------------AGTGTCAATATTCCATAGGAATTTGGGGGATGTAGCTGATTTCCAGG------GTTTT--- i canFam3.chr1 C 0 I 1311 e nomLeu3.chr10 3656015 0 + 106955855 I a score=441966.000000 s hg38.chr19_GL949748v2_alt 970891 234 + 1064304 TTTTTCC----------------------------------------TCTTTATGTATGTATGTAttttagagatgggatctcgccgtgttgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggcctcccaaagtgctagaattacaggcatgagccaTGTCACCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTACTTAT-------- s panTro4.chr19 59904752 234 + 63644993 TTTTTCC----------------------------------------TCTTTATGTAtgtatgtattttagagatggggtctcaccatgttgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggtctcccaaagtgctagaattacaggcatgagccaTGTCACCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTACTTAT-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834270 199 + 60714840 tttttcc----------------------------------------tctttatgtatgtatgtattttagagatggggtctcgccatattgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggcctcccaaaatgctagaattacaggcatgagccaTGTCACTCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGC-------------------------------------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644971 272 + 64156825 TTTTTCCATTTGGAGAATGTAGCTGGTTTTCAG--GGGGTTTTTTTTTTCCTCTTTATGCATGTAttttagagatggggtctcgctatgttgcccaggctggtcttaaactcccgagcgcaagaggtctgcctgccttggcctcctaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATCATTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785883 234 + 59248254 TTTTTTC----------------------------------------CTCCTCTTTATGCATGTAttttagagatggggtctcgctatgttgcccaggctggtctcaaactcccgagcgcaagaggtctgcctgccttggcctcccaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATCATTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889793 235 + 51301725 ttttttt----------------------------------------ctcctctttatgcatgttttttagagatggggtctcgctctgttgcctaggctggtctcaaactcccgagcgcaagaggtctgcctgccttggcctcccaaagtgctaggattacaggcgtgagccatctcgCCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTCTAATTGTGTAACATAAATTGCATGCAGTTTGGTTGTAAatggaattcatttattt---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597736 271 + 50890351 TTTTTTCCTCCTCTTTATGCATGTATTTTAGAGATGGGGTCTCG---CTCCTCTTTATGCATGTAttttagaggtggggtctcgctctgttgtctaggctggtttcaaactcctgagcgcaagagatctgcctgccttggcctcccaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATAGTTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1081 243 + 138250 ctttttc----------------------------------------tctttttttatgtatatattttagacgtggggtcttaccatgttgcctaggctggtctcaaactcctgagctcaagccatctgcccatcttggcctcccaaaatgctgggattacaggcctgagccatcgcacccCACCTTGTTTTTTTCTCTTAATCTGTGTTCTTAGAACTATAGCTGTATAACGCAAATCACAGGTAA-TTGGTTGTAGATGGAAGCTATTTTCTT--TCTCttat i calJac3.chr22_GL285922_random C 0 I 314 e canFam3.chr1 20055635 1311 - 122678785 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=71079.000000 s hg38.chr19_GL949748v2_alt 971125 45 + 1064304 TTTTTAATGAATGATTTGCAAATCAGGTAGTCTTCTGGGCCAGTG s panTro4.chr19 59904986 45 + 63644993 TTTTTaatgaatgatttgcaaatcaggtagtcttctgggccagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834469 24 + 60714840 ---------------------ATCAGGTAGTCTTCTGGGCCAGTG i ponAbe2.chr19 C 0 I 3879 s rheMac3.chr19 60645243 36 + 64156825 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55786117 36 + 59248254 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47890028 36 + 51301725 ---------aatgatttgcAAATCAGGTAGTCTTCTGGGCCATCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598007 36 + 50890351 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1638 45 + 138250 TTTTTaatgaacgatttgcaaatcacgcagcctcctgagccagtg i calJac3.chr22_GL285922_random I 314 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=230024.000000 s hg38.chr19_GL949748v2_alt 971170 134 + 1064304 TACGCTCAGACTCCCAATGGAAGCTATTGGAAGCTACATGCTCAATGTGATCCTCCTTTTAATACTAAAATCACAGGACACGTggcctggcatagtggctcacgcctataatcccatcaccttgggaggccgaa s panTro4.chr19 59905031 134 + 63644993 tacgctcagactccCAATGGAAGCTATTGGAAGCTACATGCTCAATGTGATCCTCCTGTTAATACTAAAATCACAGGACACGTggcctggcacagtggctcacgcctataatcccagcactttgggaggccaaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60645279 134 + 64156825 taggctcagactccCGACGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTCAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacgcctgtaatcccagcactttgggaggctgaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55786153 134 + 59248254 taggctcagaCTCCCGACGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTCAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacgcctgtaatcccagcactttgggaggctgaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47890064 134 + 51301725 TAGGCTCAGACTCCCAGTGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTTAATACTTAAATCACAGGACAggtggcctggcacagtggctcacgcctgtaatcccagcaccttgggaggccgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598043 134 + 50890351 taggctcagaCTCCCAATGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTTAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacacctgtaatcccagcaccttgggaggccgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1683 132 + 138250 taggct--GACTCTCTGGGGAAGCTATTGGAAGCTACACGCTCAATATAATCCTCCCGTTAATACTAAAATCATAGGATGGGTAgccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=-1300.000000 s hg38.chr19_GL949748v2_alt 971304 3 + 1064304 gc-a s panTro4.chr19 59905165 2 + 63644993 gc-- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60645413 3 + 64156825 gca- i rheMac3.chr19 C 0 I 639 s papAnu2.chr19 47890198 2 + 51301725 gc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598177 2 + 50890351 gc-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1815 2 + 138250 gc-- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C a score=119109.000000 s hg38.chr19_GL949748v2_alt 971307 154 + 1064304 aggcagatcccttgagggcaggagttcaagaccagcctgcccaacatggtgaaacattgtctctctactaaaaatacaaaaattagtcacgcatggtgggacatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac s panTro4.chr19 59905167 154 + 63644993 aggcagatcccttgagggcaggagttcgagaccagcctgcccaacatggtgaaacattgtttctctactaaaaatacaaaaattagtcaggcatggtgggacatgcctgtaatcccagttactgagaaggctaaggcaggagaatcacttgaac i panTro4.chr19 C 0 I 891 s papAnu2.chr19 47890200 154 + 51301725 aggaagatcccttgaggccaggagttcaagaccagcctggccaatatggtgaaacatcgtctctctactaaaaatacaaaaattagctggggatggtgggatatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598179 154 + 50890351 aggaagatcccttgaggccaggagttcaagaccagcctggccaatatggtgaaacatcgtctctctactaaaaatacgaaaattagctggggatggtgggacatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1817 152 + 138250 gggcagatcccttaagggcagaagttcaagaccagcctggccaacacagtgaaacccca--tctctactaaaaattaaaaaattagccaggcggggtgatatatgtctgtaatcccagttactcagaaagctgagtcaggagaatcacttgaac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=109358.000000 s hg38.chr19_GL949748v2_alt 971461 266 + 1064304 ttcggaggtggaggttgcagtgagctgagatggcaccactgaagtccagtctggccaatagagca--agactctctc-aaaaaaaaaaaaTTATAGGACAAATCTTTAGAAAGGAATTGGggcctggcatggtggctcatgcctgtaatctcagcactttaggaggc------gggcagaacacctgaggtcaggagtttgagaccagcctggctgatgcagtgaaaccctgtctctactaaaaatacaaaaattagctaggcgtggtggtatgg s papAnu2.chr19 47890354 270 + 51301725 ctgggaggtggaggttgcagtgagctgagattgcaccacttctgtacagtctgggcaatagaacaagacacTCTCTC----CAAGAAAAATTATAGGACACGTCTTTAGAAAGGAATTGAGttctggcgcggtggctcacgcctgtagtctcagcactttgggaggccgaggtgggcagatcacctgaggtcaggagcttgagaccagcccgaccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgt-gtggtgTGG i papAnu2.chr19 C 0 M 377 s chlSab2.chr6 47598333 265 + 50890351 ctgggaggtggaggttgcagtgagctgagattgtaccacttctctacagtctgggcaataga-----acactctctc----caagaaaaaTTACAGGACACATCTTTAGAAAGGAATTGAGTTCTggcacggtggctcatgcctgtagtctcagcactttgggaggccggggtgggcagatcacctgaggtcaggagcttgagaccaacccggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgt-gtggtgtgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1969 273 + 138250 tcggaaggcagacgttgcagtgagctgagactgcaccactgcagtccagtctgggaaatagagta--agactgtttaaaaaaaaaaaaaaTTACGGGACGAATCTTTAGAAAGGAATTAGggctgggcactgtggctcacgcctgtaatctcagcactttcagaggccaaggcgggcaggtcacctgaggtcaggagtttgagaccagcctggccaatattgtgaaaccccgtctctactgaaaatacaaaaattagctgggcatggtggtgcgt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=31368.000000 s hg38.chr19_GL949748v2_alt 971727 166 + 1064304 tcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaagtcgggagg------ttgcagtgagccgagatcgtgccagcctgggtgacagaacgagattgtctcaaaa----------aaaaaaaaaaaTTGTATCTGCACTGATGGTTTCTGTTCAGAGATTCGATTTTA s chlSab2.chr6 47598598 180 + 50890351 tcctgtaatcccagctacttgggaggctgaagcaggagaatcacttgaagccaggaggcagagcttgcagggagccaagatcgtgccagcctgggcaacagaacgagattgtctcaaaaaataaaaaataaaaaataaaaTTG--TCTGCACTGATGGTTTCCGTTCAGAGATTCGATTTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2242 166 + 138250 gcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggagc-agaggttacagtgagccgagatggc----acctgggtgacagaacaagactgtctcaaaaaacaaaaca-aaacaaaaaaaCTGTGTCTGCACTGATGGTTTCTGTTCAGAGA---------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e papAnu2.chr19 47890624 377 + 51301725 M e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=23234.000000 s hg38.chr19_GL949748v2_alt 971893 87 + 1064304 TGTTAACATCTCTGGTAttttttttttt----tttttttaag-atg--------gagttttactc---ttgcccacgctgg----caatggcatgatctaggctcac s papAnu2.chr19 47891002 98 + 51301725 TGTTAACatctctggtattttttttttttttctttttttaagtatg--------gagtcttgctc-tgttgcccaggctggagtacaatggcgtgatcttggctcat i papAnu2.chr19 M 377 C 0 s chlSab2.chr6 47598778 91 + 50890351 TGTAAACATCTCTGGTAttttttttt------cttttttaag-atg--------gagtctagctc-tgttgcccaggctggagtgcaatggcgtgatcttggctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2408 84 + 138250 ------------------Ctttttttct----cttttttgag-acggagcttcagagtttcgctcttgttgcccagcctggagtgcagaggcacaatctcggctgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=11630.000000 s hg38.chr19_GL949748v2_alt 971980 27 + 1064304 tgcaacctccggct-tcaaggaggttga s panTro4.chr19 59906212 27 + 63644993 tgcaacctccggct-tcaaggaggttga i panTro4.chr19 I 891 C 0 s papAnu2.chr19 47891100 22 + 51301725 tgcaacttccggct-tcaag-----cga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598869 22 + 50890351 tgcaacttccggct-tcaag-----cga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2492 28 + 138250 cacaacctctgcctctctgggaggtgga i calJac3.chr22_GL285922_random C 0 I 59 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=216936.000000 s hg38.chr19_GL949748v2_alt 972007 483 + 1064304 ttctcctgcctcagcctcctgagtagctgggattacaggcactcaccaccacgccgggctaatttttatatttttagtagagatgggatttcaccatgttggccaggttggtctcgaact---gacctcatgatccgcccgcctcagccttccaaagtgctaggatttacaggcatgagccactgcgtccagccAT--ACATATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTAGGAACTGTCCTCTTCCTATGAAGTAAC--TAATCTAGGATATGTACCTGGCATCTGAAAACTACCCACTTAAATTTAATGACATATTCAGTTCATGGCTGGAGACGATGAGTAGAAGGAAAGGATTCTTCCCACACCCACTATATCTAGGCCCTGAAACATTAAAAAAGAAGTCCCACAAGCAGTGAGATGTCACCGACTCACTAACTGTATCTTCAAATGAATGTCTAGTTTTTTTGGTtgtgtg s panTro4.chr19 59906239 485 + 63644993 ttctcctgcctcagcctcccgagtagctgggattacaggcactcaccaccacgccgggctaatttttgtgtttttagtagaaactggatttcaccatgttggccaggctggtctcgaactcctgacctcatgatccgcccgcctcagccttccaaagtgctgggatt-acaggcatgagccactgcgcccagccAT--ACATATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTAGGAACTGTCCTCTTCCTATGAAGTAAC--TAATCTAGGATATGTACCTGGCATCTGAAAACTACCCACTTAAATTTAATGACATATTCAGTTCATGGCTGGAGACGATGAGTAGAAGGAAAGGATTCTTCCCACACCCACTATATCTAGGCCCTGAAACACTAAAAAAGAAGTCCCACAAGCAGTGAGATGTCACCCACTCACTAACTGTATCTTCAAATGAATGTCTAGTTTTTTTGGTTGTGTG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47891122 462 + 51301725 ttctcctgcctcagcctcctgagtagctgggactacaggcgc---ccaccacgtctggataatttttgtatttttagtagagatggg-tttcaccacgttggccaggctggtctcgaactcttgacctcgtgatctgcccacctcagtcttccaaagtgctgggatt-acaggaatgagccaccgcgcctggcc----atacaTCTCTGGTATTCTTTGTTTCTAACATCACCTCCAACAGTTGGGAACTGTCATCTTCCTATAAAGTAGCTTTAATCTAGGATATGCACCTGGCATCTGAAAACTA-CCAC-----TTTAATGACATACTCAGTTCGTGGCTGGA---GATGGGTAGAAG----GGATTCTTCCTACACCCACTATATTTAGGCCCTGAAACACTAAAACCGAAGTCCCACAGGCAGTGAGATGTCACTCACTTGC------CATCTTCAAATTAATGTCTAGTTTTCTTGGttttgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598891 470 + 50890351 ttctcctgcctcagcctcctgagtagctgggactacaggcacccaccaccacatctggctaatttttgtatttttagtagagatggg-tttcaccacgttggccaggctggtctcgaactcttgacctcatgatctgcccacctcagtcttccaaagtgctggaatt-acaggcatgagccaccgcacctggccATGTATACATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTGGGAACTGTCATCTTCCTATAAAGTAGCTTTAATGTAGGGTATGCACCTGGCATCTGAAAACTACCCAC-----TTTAATGACATACTGAGTTCGTGGCTGGA---GATGGGTAGAAG----GGATTCTTCCTACACCCACTATATTTAGGCCCTGAAACACTAAAACCGAAGTCCCACAGGCAGTGAGATGTCACTCACTTGC------TATCTTCAAATTAATGTCTAGTTTTCTTGGTTTTGTG i chlSab2.chr6 C 0 I 349 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=6355.000000 s hg38.chr19_GL949748v2_alt 972490 82 + 1064304 tgtgtgtggtgtgtggtgtgtgtgGTATTTTTTTGGGGGGGGGGGGGTTTTCttttttttttttttttggtttttttttttt s panTro4.chr19 59906724 73 + 63644993 TG------GTGTGTGGTGTGTGTGGTATTTTTTTGGGGGGGGGG---TTTTCtttttttttttttttggttttttttttttt i panTro4.chr19 C 0 I 2 s papAnu2.chr19 47891584 48 + 51301725 ---------tatgc-atgtgtgtggt-tttttttgt-----------ttttgttttgtttttttttttga------------ i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e chlSab2.chr6 47599361 349 + 50890351 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 972572 1 + 1064304 g s panTro4.chr19 59906799 1 + 63644993 g i panTro4.chr19 I 2 C 0 s papAnu2.chr19 47891632 1 + 51301725 g i papAnu2.chr19 C 0 I 305 s chlSab2.chr6 47599710 1 + 50890351 g i chlSab2.chr6 I 349 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=119847.000000 s hg38.chr19_GL949748v2_alt 972573 239 + 1064304 atagtcttgctctgtcgcccaggctggaatgcagtggctccatctcagctcactgcaacctccacctcctgagttcaggtgtgattctcctgcctcagcctcccagggattaaggtgcatgccaccacgcccagctaacttctttatttttagtagagacgagttttcaccatgttggtcaagctggtctcgaattcctgacctcaggtgatccacccacctcagcctcccaaagtgct s panTro4.chr19 59906800 237 + 63644993 atagtcttgctctgtcacccaggctggaatgcagtggctccatctcagctcactgcaacctccacctcctgagttcaggcg--attctcctgcctcagcctcccaggaattaaggtgcatgccaccacgcccagctaacttctgtatttttaggagagacgagttttcaccatgttggtcaagctggtctcgaattcctgacctcaggtgatccacccacctcagcctcccaaagtgct i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47891938 237 + 51301725 aTAGTCTTGCTcagtcgtccaggctagagtgcagtggtgccatctcagctcactgcaacctccgcctcctgagttcaagcg--attctcctgcctcagcctcccagggattaaggtgcacaccaccacgcctagctaacttctgtgtttttagtagagacgaagtttcaccacgttggtcaggctggtctcgaactgctgacctcaggtgatccgcccacctcagcctcccacagtgct i papAnu2.chr19 I 305 C 0 s chlSab2.chr6 47599711 237 + 50890351 atagtcttactcagtcatccaggctggagtgcagtggtgccatctcagctcactgcaacctccgcctcctgagttcaagcg--attctcctgcctcagcctcccagggattaaggtgcacgccaccacacccagctaacttctgtgtttttagtagagacgaagtttcaccacattggtcaggctggtctcgaactgctgacctcaggtgatccgcccacctcagcctcccacagtgct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=136297.000000 s hg38.chr19_GL949748v2_alt 972812 164 + 1064304 gggattacaggtgtgagccaccgtgccggccCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATT--ACAGTCATGGAAGTTTCTAGAAGGCCGGGTAGGGT-----------------------ctttgagaggccgag s panTro4.chr19 59907037 164 + 63644993 gggattacaggtgtgagccaccgtgccggccCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATT--ACAGTCATGGAAGTTTCTAGAAGGCCGGGTAGGGT-----------------------ctttgagaggccgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103348417 166 - 106955855 GGGATTACAGGTGTGAGCCACCGTGCCAGCCCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATTACACAGTCAGGGAAGTTTCTAGAAGGCCAGTTATGGT-----------------------ctttgggaggccgag i nomLeu3.chr10 M 3096 C 0 s papAnu2.chr19 47892175 189 + 51301725 gggattacaggcgtgagccattgtgccggTCCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCTCTTTAGTCTTATGTGGGTTTTCCTCCATCACACAGTCATGGAAGTTTCTAGAAGactaggtacggtggctcacgcctgtaatcccagcactttgggaggctgaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47599948 189 + 50890351 gggattacaggcgtgagccatcgtgcTGGTCCCCTCAATTGAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATCACACAGTCATGGAAGTTTCTAGAAggctaggtacggtggctcacgcctgtaatcccagcactttgggaggctgaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=298201.000000 s hg38.chr19_GL949748v2_alt 972976 261 + 1064304 gcaggtggatcatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccaggcgtggtgtcgga-gcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacctgggaggcggaagttgcagtgagctgagattgtgccactgtactccagcctgggtgtcagagcgaga--ctgtctcaaaaaaaaaaaaaaaa------------aaGTTTCTATACATTCATA s panTro4.chr19 59907201 259 + 63644993 gcaggtggatcatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccaggcgtggtgtcgga-gcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgtactccagcctgggtgtcagagcgaga--ctgtctcaaaaaaaaaaaaaaaa--------------GTTTCTATACATTCATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103348583 276 - 106955855 gcaggtggatcatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccatgcatggtgtcagatgcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacccgggaggtggaggttgcagtgagccgagattgtgccactgtactccagcctgggcgtcagagcgagactctgcctcaaaaaaaaaaaaaaaaaaaaaaaaaaGGAAGTTTCTATACATTCATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55786287 252 + 59248254 gcagatggatcataaggtcaggagttcaagaccagcctggctaatac-gtgaaaccccatctttactaaaaatac-aaaattagccaggcgcggtgtcggatgtctgtaatcccagc-tacttaggagggtgaggcagagaattgcttgaacccaggaggcggaggttgcagtgagccgagactgtgctcctgtactccaacctgggcgtcagagcaaga--ctgtctca-----gaaaaaaaaa--------------GTTTCTGTACATTCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47892364 251 + 51301725 gcaggtggatcatgaggtcaggagttcaagaccagcctggctaatac-gtgaaatcccatctttactaaaaatac-aaaattagccaggcgtgatgtcggatgtctgtaatcccagc-tgcttgggagggtgaggcagagaattgcttgaacccaggaggcggaggttgcagtgagccaagactgtgctcCTGTACTCCAACCCGGGCGTCAGAGCGAga--ttgtctca------aagaaaaaa--------------gtttctgtACATTCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47600137 252 + 50890351 gcaggtggatcatgaggtcaggagttcaagaccagcctggctaatac-gtgaaaccccatctttactaaaaatac-aaaattagccaggcgtggtgtcagatgtctgtaatcccagc-tacttgggagggtgaggcagagaattgcttgaacccaggaggcggaggtcgcagtgagccaagactgtgctcctgtactccaacctgggcgtcagagcgaga--ctgtctca-----gaaaaaagaa--------------GTTTCTGTACATTCACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e rheMac3.chr19 60645416 639 + 64156825 I a score=781045.000000 s hg38.chr19_GL949748v2_alt 973237 494 + 1064304 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTTCTCCATCGTCATGGACTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TAAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTAGGATCCTAGTACCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGCAAATACAATCgtaatcccagcatgttagggaggccagggtgggcagatcatctgaggtcgggagttcaagaccagcctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgcgca----------------------------------tgtgtgtacacacacac----acccccct s panTro4.chr19 59907460 492 + 63644993 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTCCTCCATCGTCATGGACTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TAAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTGGGATCCTAGTACCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGAAAGACACTACCTCTCTAGCAACTGAATTTAGCAAATACAATCgtaatcccagcacgttagggaggccagggtgggcagatcgtctgaggtcgggagttcaagaccagcctcgccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgcgca----------------------------------tgcgtgtacacacacac------ccccct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838372 478 + 60714840 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTCCTCTGTCGTCATGGGCTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGA------AGC-TAAGGTGAA--------------CTGTGTTGGTTAATATCTAGGATCCTAGTAGCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGTAAGACACCACCTCTCTAGCAACTGAATTTAGGAAACAGAATCgtaatcccagcacgttagggaggccagggtgagcagatcgtctgaggtcgggagttgaagaccaacctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcatgcgaa----------------------------------cgcgtgtacacacacacacacacacccct i ponAbe2.chr19 I 3879 C 0 s nomLeu3.chr10 103348859 496 - 106955855 AAGTTTCAAGATTTAGGGGTGTGTTTTCACTCCTCCGTCATCATGGGCTCCAATCTGCCATCTATTTCCAAGGTCCTTCCAGGTCCTGTGTCCCTCAGCTAATGGTATACTTCTCTTGGGACCCAGAGATAAATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TGAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTAGGATCCTAGTACCAGAC-ATGTCAGAGTCTGAGCTGGTGTCTTCTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATCgtaattccagcacgttagggaggccagggtgggcagaccgtctgaggtcgggagttcaataccagcctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgtgca----------------------------------cacgcatacacacacac--acacacctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55786539 530 + 59248254 AACCTTTAAGATTTGGGGGGATGTTTTCACTCCTCTGTCGTCATGGGCTCCAATCTGCCCTCTATTTCCATGGCCCTTCCAGGTCCTGTGTCCCTCGGCTAGTGGTATGCTTTGCTTGGGACCCAAAGATATGTGGGCATTATAGTTCGAATTATAGTTAAGGTTTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAACTTAAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCTTACTACCAGAT-ACGTTGGAGTCTGAGCTGGCGTCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATtgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacagaatttagccgggtgtggtggtacacacacacacacacacacacacacacacacacacacacacacacacacacacacac----acaacacg i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47892615 486 + 51301725 GACCTTTAAGATTTGGGGATATGTTTTCACTCCTCTGTTGTCATGGGCTCCAATCTGCCCTCTATTTCTATGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTTGCTTGGGACCCAAAGATATGTGGGCAT--TAGTTCAAATTATAGTTAAGG-TTAGAACTC--ttgagacagaagaaagaaaacagaacttaAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCCTACTACCAGATAACGTTGGAGTCTGAGCTGGCGTCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAAtagaattgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaatacagaacttagctgggtgtggtggtacacaca----------------------------------------cacacacacac----aaaacacg i papAnu2.chr19 C 0 I 13 s chlSab2.chr6 47600389 481 + 50890351 GACCTTTAAGATTTGGGGGTATGTTTTCACTCCTCTGTCATCATGGGCTCCAATCTGCCCTCTTTTGCCATGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATACTTTGCTTGGGACCCAAAGATATCTGGGCATTATAGTTCAAATTATAGTTAAGG-TTAGAACTCTATTGAGACAGAAGAAAGAAAACGGAACTTAAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCTTACTACCAGAT-ACGTTGGAGTCTGAGCTGGCAGCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATtgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaatacagaacttagccgggtgtggtggtacacaca------------------------------------------------cac----acaacacg i chlSab2.chr6 C 0 I 13 e canFam3.chr1 20055635 1311 - 122678785 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e rheMac3.chr19 60645416 639 + 64156825 I a score=276494.000000 s hg38.chr19_GL949748v2_alt 973731 120 + 1064304 gtaatcccagctactcggaaggctggggcacaagaatcgcgtgaaaccaggaggcggaggttgaagtgagccaccgtgccaGCTgagaatcctttttacttctccaacttctgttggcca s panTro4.chr19 59907952 120 + 63644993 gtaatcccagctactcggaaggctggggcacaagaatcgcgtgaacccaggaggtggaggttgaagtgagccACCGTGCCCGCTgagaatcctttttacttctccaacttctgttggcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838850 120 + 60714840 gtaatcccagctactcagaaggctgggacacaagaatcgcgtgaacccaggaggcggaggttgaagtgagccaccgtgcccactgagaatcctttttacttcttcaacttctgttggcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349355 117 - 106955855 gtaatcccagctactcggaaagctggggcacaagagtcgcgtgaacccaggaggcagaggttgaagtgagccACCGTGCCCGCTgagaatcttttttactt---caactcttgttggcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646055 120 + 64156825 gtaatcccagatattcggaaaactggggcatgagaatcgcgtgaaccggggaagcggaggttgaagtgagccaccgtgccTGCTgaggatcctttttacttctccagcttctgttggcca i rheMac3.chr19 I 639 C 0 s macFas5.chr19 55787082 120 + 59248254 gtaatcccagatattcggaagactggggcatgagaatcgcgtgaacccgggaagcagaggttgaagtgagccACCGTGCCCGCTgaggatcctttttacttctccagcttctgttggcca i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47893114 120 + 51301725 gtaatcccagatattcggaagactggggcatgagaatcgcgtgaactcaggaagcggaggttgaagtgagccactgtgcctgctgaGGATCCTTTTTACTTCTCCAGCTTCTGttggcca i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47600883 120 + 50890351 gtaatcccagatattcggaacactggggcatgagaatcgcgtgaacccgggaagcggaggttgaagtgagccACCGTGCCCGCTAAGGATCCTTTTTActtctccagcttctgttggcca i chlSab2.chr6 I 13 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I a score=451126.000000 s hg38.chr19_GL949748v2_alt 973851 164 + 1064304 cctgcattccttggcttgtgg-cccttcctccaa---------cttcggcagagcatcttcaaacgttgccctggctcccttatca-cgtcacctcctgctggctttgactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa s panTro4.chr19 59908072 164 + 63644993 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacgttgccctggctcccttatca-cgtcacctcctgctggctttgactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838970 164 + 60714840 cctgtattccttggcttgtgg-cccttcctccaa---------cttcagcacagcgtcttcacacgttgctctggctcccttatca-cgtcacctcctgctggcttggactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349472 163 - 106955855 cctgcattccttggcttgtgg-cccttcctccaa---------cttcagcagagcatctg-aaacgttgctctggctcccttatca-cgtcacctcctgctggctttgacgctca-gctccctcttacgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646175 164 + 64156825 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-cgtcacctcctgctggctttgactgtca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787202 164 + 59248254 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-cgtcacctcctgctggctttcactgtca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893234 164 + 51301725 cctgcattccttggcttgtgg-cccttCCTCCAG---------CTTCAGCAGAGCATCTTCAAACATTGCTCTGGCTCCCTTATCA-CGCCACCTCCTGCTGGCTTTGACTCTCA-GCTCCCTCTTACAAGGATCCCTGTGATTT-CTGGACCTACCCAAATAA----ACCAGGATATAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601003 164 + 50890351 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-catcacctcctgctggctttgactctca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20056946 181 - 122678785 cctgcatcccttggctcatggtcccttccttcatggccaaagccagcagcatagtgtcttcaaatgtccttctgtctttctcatcacctttcccccctgctggctttgactctcattctccttcttataaggatccttgtaattaccttggctcacctggataatctccccacctcctaga i canFam3.chr1 I 1311 C 0 e calJac3.chr22_GL285922_random 2520 59 + 138250 I a score=216064.000000 s hg38.chr19_GL949748v2_alt 974015 77 + 1064304 ccatctt--aagatgctcagtcacctcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt s panTro4.chr19 59908236 77 + 63644993 ccatctt--aagatgctcagtcacctcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839134 77 + 60714840 ccatctt--aagatgctcagtcacatcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349635 77 - 106955855 ccatctt--aagatgctcagtcacatctt-----ctaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646339 81 + 64156825 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccagaagttgggacttggacatctt- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787366 81 + 59248254 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccagaagttgggacttggacatctt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893398 81 + 51301725 GCATCTT--AAGAAGCTCAGTCACATCTAAGATGCGAGGTCCCTTTTG----------------CTCACAGGTGCCAGGAGTTGGGACTTGGACATCTT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601167 81 + 50890351 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccaggagttgggacttggacatctt- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2579 77 + 138250 ccatctcaaaagaTTCTCAGTCACTTCTA-----GGAGGTCCCTGTTG----------------CTGGCAGG-Gccagaggttaggacttggacatctt- i calJac3.chr22_GL285922_random I 59 C 0 s canFam3.chr1 20057127 87 - 122678785 ---tcct-----ttattcaaccacacctg-----caaagtcccctttgtatgtaacataacatattcacagggaccagggattatcacatagacatcttt i canFam3.chr1 C 0 I 106 a score=103333.000000 s hg38.chr19_GL949748v2_alt 974092 33 + 1064304 aggggaggccattcttctgtccaccacaCCACC s panTro4.chr19 59908313 33 + 63644993 aggggaggccattcttctgtccaccacaCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839211 33 + 60714840 aggggaggccattcttctgtccaccacaCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349712 32 - 106955855 gggggaggccattcttctgtccaccacGCCA-C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646420 32 + 64156825 -ggggaggccattcttctgtccaccacGCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787447 32 + 59248254 -ggggaggccattcttctgtccaccacGCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893479 32 + 51301725 -GGGGAGGCCATTCTTCTGTCCACCACGCCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601248 32 + 50890351 -ggggaggccattcttctgtccaccgcGCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2656 33 + 138250 gggggaggccattcttctgtccaccacaCCACC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057214 106 - 122678785 I a score=999828.000000 s hg38.chr19_GL949748v2_alt 974125 308 + 1064304 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAAGTGTGTCT--AACCCACGGCTCAAGAGTCAAA------------GGTGCATCACAGCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTCACAAAGCTTCTCCAAGAAAAATCAAGCCTGTTGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTAAGGGAATGAAGTTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA s panTro4.chr19 59908346 298 + 63644993 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAA------------CCCACGGCTCAAGAGTCAAA------------GGTGCATCACAGCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTCGCAAAGCTTCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTAAGGGAATGAAGTTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839244 308 + 60714840 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAAGTGTGTCT--AACCCACGGCTCAAGAGTCAAA------------GGTGCATCACACCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCAACATAACTAGCAATGGCTGCTGCAATCTCGCAAAGCTTCTCCAAGAAAAATCAAGCCTATCGTGTTTGGATCTGGGGCTGAATTACATAGGAGTTAGCGGAATGAAGCTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349744 309 - 106955855 CCACGATTCCATTTCCACGTCACCATTGTCTC-TAAGTGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCATCACACCACTGAGAACTCACAGGTTCGGGTTTTCTTTCTTCCTGTGGTTGATTTCTAGGCTATGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTTGCAAAGCTTCTCCAAGAAAAATCAAGCCTATCGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTATCGGAGTGAAACTCCTGTGCGAGGCTTTGAGGAAACCACTGTGCAACTTGAAATGTCTGTGGTGAGTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646452 308 + 64156825 CCATGATTCCATTTCCAGGTCACCATTGTCTCTTAAGCGTGTCTAAAACCCATGGCTC---AGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCAGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787479 310 + 59248254 CCATGATTCCATTTCCAGGTCACCATTGTCTCTTAAGCGTGTCTAAAACCCATGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCAGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAAATGTCTGTGGTGAGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893511 309 + 51301725 CCATGATTCCATTTCCAGGTCACCATTGTCTC-TAAGCGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCGGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTATGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601280 309 + 50890351 CCATGATTCCATTTCCAGGTCACCATTGTCTC-TAAGCGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTTGGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACAAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2689 307 + 138250 CCATGATTCCA-TTCCATGTCACCATTGCCTC-TAAGAGCGTCCGAAGCCCATGGCTC-GGAGCTGAA------------GGTGCATCACACCAGCGAGAACTAACAGGTTTGGATTTTC-TTCTTTGTGTGGGTGATTTCTAGGCTGTGGAACTGTGACATAACTAGCAAAGGCTGCTGTCACCTCGCAAAGCTTCTCCACGAAAAATCAAGCCTAACGAACTTGGATCTGGGGCGGAATGACATAGGAGTTCCCGGAGTGCAGGGCCTATGTGAGGCTTTGAAGAAACCACTGTGTAACTTGAAACGTCTGTGGTGAGTCA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20057320 313 - 122678785 CCATGATTTCATTTCCATGTC-CCATTGTCTG-AAAGCTTGTCTAAATCCTGCAGCTT-GAGGTCAACAACATTGGTTTTGGTGTATCTCCTCAGGGAAGACTCA-------GAGTTTACTTTCTTCATGTGATTGATTTCTAGGCTTTGGTATTGCAGCATAACCAGTGGTGGCTGCAATCATCTGTCAACACTTCTCCAGCAAAATTCAAACCTTACCCACTTGGATCTGGGGCTGAATCACATAGGGATTACTGGACTGAAGTTTCTGTGTGAGGCTTTGAAGAACCCAATGTGTAACCTCAAATGCCTATGGTAAGTTA i canFam3.chr1 I 106 I 3553 a score=363709.000000 s hg38.chr19_GL949748v2_alt 974433 158 + 1064304 ACTTATAAGTTCAACTTCCTATACTTACACCTTACTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCCGACTTCCCAAGTTATATAATTGAGAGGACCTTTATAGAGTCGATCGAGCATTTACTAGGATGGTTAAAGGAATAAGTtctagtctat s panTro4.chr19 59908644 158 + 63644993 ACTTATAAGTTCAACTTCCTATACTTACACCTTACTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCCGACTTCCTAAGTTATATAATTGAGAGGACCTTTATAGAGTCAATCGAGCATTTACTAGGATGGTTAAAGGAATGAGTTCTAGTCTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839552 158 + 60714840 ACTTATAAGTTCAACTTCCTATACTTATACCTTATTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCTGACTTCCCAAGTTATATAATTGAGAGGACTTCTATAGAGTCGATCGAGCATTTACTAGGATGGTTAAAGGAATAAGTTCTAGTCTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350053 153 - 106955855 ACTTATAAGTTCAACTTCCTATGCTTATACCTTATCGAATCTGTGGCTAAT-----AGAATCAGTGAAGCCAACCTCCCAAGTTATATAATTGACAGGACTTGGATAGAGTCAATTGAGCATTCACTAGGATGGTTAAAGGAATAAGTTCTAGTCTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646760 143 + 64156825 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAACGTGAAGCAATCAGTGAAACCG--------------GTAATTGAGAGGACTCGGATAGAGTCAACCGAGCTTTCACTAAGGTAGTTAAAGGAAT-AGTTCTAGTCTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787789 143 + 59248254 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAACGTGAAGCAATCAGTGAAACCG--------------GCAATTGAGAGGACTCGGATAGAGCCAACCGAGCTTTCACTAAGATAGTTAAAGGAAT-AGTTCTAGTCTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893820 157 + 51301725 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAATGTAAAGCAATCAGTGAAACTGACTTCCCAAGTTATGTAATTGAGAGGACTTGGATAGAGTCAACCGagctttcactaagatagttaaAGGAAT-AGTTCTAGTCTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601589 143 + 50890351 ACTTATAACTTCAACTTCCTCTACTTAGACCTTATCGAATCTGTGGCTAATGTAAAGCAATCAGTGAAACCG--------------GTAATTGAGAGGACTTGGATAGAGTCAACCGAGCTTTCACTGAGATAGTTAAAGGAAT-AGTTCTAGTCTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2996 155 + 138250 CCTCATAAGTTCAACTTACTACGTTTACACCTTATTGAATCTGTGTCTAATGTAAAACAATCGGGGAAGGAGACTCCTC-GGTGAGATAATTGAGAGGACCTGAAT--GGTCAGTCGAGCATGCACTAGGATGGCTAGAGGAGTATGTTCTAGTCTGT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I a score=20570.000000 s hg38.chr19_GL949748v2_alt 974591 24 + 1064304 gtctaagttttt----gttttttttttt s panTro4.chr19 59908802 23 + 63644993 GTCTAAGttttt-----ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839710 12 + 60714840 G----------------ttttttttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350206 28 - 106955855 GTCTGAGttttttgtttgttgttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646903 21 + 64156825 GTCTAAGTCTC-------tttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787932 19 + 59248254 GTCTAAGtctc---------tttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893977 24 + 51301725 GTctaagtctct----cttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601732 24 + 50890351 GTCTAAGtcttc----tttttttttttt i chlSab2.chr6 C 0 I 146 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C a score=281449.000000 s hg38.chr19_GL949748v2_alt 974615 188 + 1064304 ctt-----gaagttttgctcttgtcacataggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctcccaggttcaagcaattctcttgcttcagcttcccgagtagctgggattacaggcgcccgccaccatgcccagctaa-ttcttgta-tttttagtagagacagggtttcgccatgttga s panTro4.chr19 59908825 188 + 63644993 ctt-----gaagttttgctcttgtcacataggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcttgcttcagcttcccgagtagctgggattacaggcacccgccaccatgcccagctaa-ttcttgta-tttttagtagagacagggtttcgccatgttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839722 186 + 60714840 ctt-----gaagctttgctcttgt--cataggctggagtgcaatggcgtgatcttggctcactgcaacctccgcctctcaggttcaagcagttctcttgcctcagcttcccaagtagttgggattacaggcgcccgccaccatgcccagctaa-tttttgta-tttttagtagagacagggtttcgccatgttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350234 193 - 106955855 cttgaggcgaagttttgctcttgtcacataggctggagggcaatggcgtgatcttggctcactgcaacatccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaa-tgtttgta-tttttagtagagacagggtttcgccatgttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646924 189 + 64156825 ttt-----gagacggagtctttgtcgcccaggctggagtgcagtggccggatcgcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccacctcgcccagctag-ttgttgtattttttagtagagacggggtttcaccaggttag i rheMac3.chr19 C 0 I 21 s macFas5.chr19 55787951 190 + 59248254 ttt-----gagacggagtctttgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccacctcgcccggctagttttttgtattttttagtagagacggggtttcaccaggttag i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47894001 190 + 51301725 ttt-----gagacagagtctttgtcgcccaggctggagtgcagtggccggatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacgggcgcccgccacgttgcccagctagttttttacattttttagtagagacggggtttcaccaggttag i papAnu2.chr19 C 0 I 2 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I a score=27932.000000 s hg38.chr19_GL949748v2_alt 974803 25 + 1064304 aggttcatctcaaactcctgacctc s panTro4.chr19 59909013 25 + 63644993 aggttcatctcaaactcctgacctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839908 25 + 60714840 aggttcatctcaaattcctgacctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350427 25 - 106955855 aggttcatctcaaactcctgacctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55788143 25 + 59248254 aggatggtctcgatctcctgacctc i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47894193 25 + 51301725 aggatggtctcgatctcctgacctc i papAnu2.chr19 I 2 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=910.000000 s hg38.chr19_GL949748v2_alt 974828 1 + 1064304 a s panTro4.chr19 59909038 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839933 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350452 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55788168 1 + 59248254 a i macFas5.chr19 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=18759.000000 s hg38.chr19_GL949748v2_alt 974829 33 + 1064304 ggtgatccgcccatctcggcctcccaaagtgct s panTro4.chr19 59909039 33 + 63644993 ggtgatccgcccatctcggcctcccaaagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839934 33 + 60714840 ggtgatccacccatctcggcctcccaaagtgct i ponAbe2.chr19 C 0 I 153 s nomLeu3.chr10 103350453 33 - 106955855 ggtgatccgcccatctcggcctcccaaagtgct i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=13704.000000 s hg38.chr19_GL949748v2_alt 974862 56 + 1064304 gggattacaggcgtgagccactgcgccaggccctatgtctaagttctagtctgtgt s panTro4.chr19 59909072 56 + 63644993 gggattacaggcgtgagccactgcgcccggccCCAGATGGAGGTTCTAGTCTGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103350486 56 - 106955855 gggattacaggcgtgagccactgcgcccggccCTATGTGTAAGTTCTAGTCTGTGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=5214.000000 s hg38.chr19_GL949748v2_alt 974918 11 + 1064304 catgCAAAGAA s panTro4.chr19 59909128 11 + 63644993 TATGCAAAGAA i panTro4.chr19 C 0 M 393 s nomLeu3.chr10 103350542 11 - 106955855 CATGCAAAGAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3151 11 + 138250 CATGCAAAGAC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=7827.000000 s hg38.chr19_GL949748v2_alt 974929 51 + 1064304 CACCTGTGAAATTTTAAGGATACAGTGCCTCAAGCCATTCAGCCAAAAGCC s nomLeu3.chr10 103350553 50 - 106955855 CACCTGTGAAATGTTAAGGATACAGTG-CTCAAGCCATTCAGCCCAAAGCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3162 50 + 138250 CAGCCATGGCATTTTGAGGATACAAGGCCTCAAGCCATTCAGATGAAATC- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I e panTro4.chr19 59909139 393 + 63644993 M a score=1146.000000 s hg38.chr19_GL949748v2_alt 974980 2 + 1064304 AC s ponAbe2.chr19 56840120 2 + 60714840 AC i ponAbe2.chr19 I 153 C 0 s nomLeu3.chr10 103350603 2 - 106955855 AC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3212 2 + 138250 AC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I e panTro4.chr19 59909139 393 + 63644993 M a score=83351.000000 s hg38.chr19_GL949748v2_alt 974982 99 + 1064304 TGCCCAGCACCCCACATTCAGAGAGGTGGGAATTGggccaggcacagtggctcatacctgtaatcccagcacttcgggaggccgaagcgggcggatcac s panTro4.chr19 59909532 99 + 63644993 TGCCCAGCACCCCACATTCAGAGAGGTGGGAATTGggccaggcacagtggctcacacctgtaatcccagcacttcgggaggccgaagtgggcggatcac i panTro4.chr19 M 393 C 0 s ponAbe2.chr19 56840122 99 + 60714840 TGCCCAGCACCCCACATTCAGAGAGGTAGGAATTAggccaggcatggtggctcacacctgtaatcccagcactttgggaggccgaagcgggcggatcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350605 99 - 106955855 TGCCCAGCACCCCACAGTCAGAGAGGTAGGAATTGCgcccggcacggtggctcacacctgtaatcccagcactttgggaggccgaagtgggcggatcac i nomLeu3.chr10 C 0 M 100 s calJac3.chr22_GL285922_random 3214 98 + 138250 TG-CCAACACCCCACATTCAGAGAGGTAGGAATTGggccgggcgcggtggctcacacctgtaatcccagcactttgagaggccgaagcaggtggatcac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=172382.000000 s hg38.chr19_GL949748v2_alt 975081 444 + 1064304 ttaaggtcaggagctcaagaccagcctggccaacttga---aactccatctctactaaaa-tataaaaattagccgagcatagtagtgggtgcctcttttttttttttttttttttttgagat--agtttcactcttgttgcccaggctgtagtgtaatggcgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgccttagcctcccacatagctgcaaataaacaggcatgtgccaccatgcctggctaa--ttttgtatttttagtatagacggggtttctccatgttggtcaggctggtctcgacctccggacct----------------------------------------caggtgagagccaccgtgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcc s panTro4.chr19 59909631 447 + 63644993 ttaaggtcaggagctcaagaccagcctggccaacttgatgaaactccatctctactaaaaatataaaaattagccgagcgtagtagtgggtgcctctttttgttttttttttttttt-gagat--agtttcattcttgttgcccaggctgtagtgcaatggcgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgccttagcctcccacgtagctgcaaataaacaggcatgtgccaccatgcctggctaa--ttttgtatttttagtatagacggggtttctccatgttggtcaggctggtctcgacctcccgacct----------------------------------------cgggtgagagccaccgtgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840221 438 + 60714840 ttgaggtcaggagctcaagaccagcctggccaacttggtgaaactccatctctactaaaaatataaaaattagccgagtgtagtagtggatgcctctttttttttttttttttt----gagac--agtttcacccttgttgtccagactggagtgcaatggcacgatctcagctcactg------ccacctcctgggttcaagtgattctcctgccttaacctcccaagtagctggaaataaacaggcatgtgccaccacgcctggctaa--ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgacctcccgacct----------------------------------------caggtgagagccactgcgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggagatggaggttgcagtgacctgagatcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 3312 470 + 138250 ttgaggtcaggagttcaagattagcctggcagacatggtgaaaccccatctc----------------------------------------------------tttttttttt----gagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgaaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggatt--acaggcacgcaccaccatgcccagccaattttttatatttttagtagagacggggtttcaccatgttgaccaggatggtctcgatctcttgaccttatgatccacctgcctcggcctcccaaaatgctgcaattacaggtgtgagccaccgcgcctggccttgtgaaaccccatctctactaaaaatccaaaatttagcctggcatggtaatcccagctgctcaggaggctgaggcagcagaatcccttaaacccaggaggtggaggttgcagtgagctgagatca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e nomLeu3.chr10 103350704 100 - 106955855 M e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=236145.000000 s hg38.chr19_GL949748v2_alt 975525 338 + 1064304 tgtcactacactccatcctgggctacaagagcaagactccatctcaggaaaaaataaaaaa------GAGGTAGGAATTAGATATCGTGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATACCTTGTGAGTTAGCTACAATCAGATGCACTTGAACCTGGAATCCTATCT-GGGAGGCAATCTTAAAAGAATTTGACTCGGGATgggcaaggtggctcatgcctgtaatcctggcattttgggagtccaaggcaggtagattgcttgaggccaagaatttaaaaacagcctggccaacacaatg-aagccctgtctcta s panTro4.chr19 59910078 330 + 63644993 tgtcactacactccatcctgggcgacaagagcaagactccatctcaggaaaaaataaaaaa------GAGGTAGGAATTAGA--------CAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTAGCTACAATCAGATGCACTTGAACCTGGAATCCTACCT-GGGAGGCAATCTTAAAAGAATTTGACTCGGGATgggcaaggtggctcatgcctgtaatcccggcattttgggagtccaaggcaggtagattgcttgaggccaagaatttaaaaacaggctggccaacacaatg-aagccctgtctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840659 338 + 60714840 tgtcactacactccatcctgggcgacaagagcaagactccatctcaggaaaaaataaagaa------GAGGTAGGAATTACACATCATGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTAGCTACAGTCAAATGCACTTGAACCTGGACTCCTACCT-GGGAGGCAATCTTAAAAGAATTTGACTCCGGATgggcaaggtggctcatgcctgtaatcccggcattttgggagtccaaggtaggtagattgcttgaggccaggaatttaaaaacagcctggccaacacaatg-aaaccctgtctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350804 343 - 106955855 tgtcactatactccatcctgggcgacaagagcaagactccatctcaggaaaaaaaaaaaaaaaaaAGGGGGTAGGAATTGGACATCGTGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTACCTACAGTCAAATGCACTCGAACCTGGAATCCTGCCCGGGGAGGGAATCTTAAAATAATTTGACTCCAgctgggcaaggtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcac--gaggtcaggagatcgagaccagcctggccaacgtggtg-aaaccctgtctcta i nomLeu3.chr10 M 100 C 0 s calJac3.chr22_GL285922_random 3782 314 + 138250 catcgttgcactccatcctgggtgacaagagcgagactccctctcagaaaaaaa-------------GACGCAGGAATTGGACCTCATGCCAGAAAAT-------------GCAGGTGAATGGTCTCAAACCAGCTGTCGTACAGATCCCATGTGAGTTAGGTACAATCTAATGCACTTGAACCTGAAATCCTCCCT-GGAAGGGAATCTT-----AATTTGATTGCAGTTgggtgaagtggctcatgcctgtaatcccagcattttgggagtctaaggcgggcagactgcttgaggccaacaatttaaaaacagcctggccagtacaatgcaaactctgtctcta i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=201823.000000 s hg38.chr19_GL949748v2_alt 975863 468 + 1064304 ctgaaagtacaaaaatccgctgagcatggctgtgtac--ctctgctcccagttactcaggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagcgaattgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaaaaaaaaaaaaacaaaaaaaacaaaggcgcctttttaatcactcactgacacgtgtagaggagcaaaaagtttgagttgcTGGTTGgcccaggaggtcaaggctgcagtgagccaagatggcgttaccacactccagcctgggcaaccgagtgagaccgtgtttcaaa----aaataaaGTggcagggtgcagtggctcatgcctgtaattccagcactttgggaggccgaggcaggtggatcacctaaggtcaggagttcgtagaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct s panTro4.chr19 59910408 457 + 63644993 ctgaaagtgcaaaaatccgctgagcgtggctgtgtac--ctctgctcccagttactcgggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagtgagctgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaaaaaaaaaaa-----------caaaggcgcctttttaatcactcactgacacgtgtagaggagcaaaaagtttgagttgcTGGTTGgcccaggaggtcaaggctgcagtgagccaagatggcgttaccacactccagcctgggcaaccgagtgggaccgtgtttcaaa----aaataaaGTggccgggtgcagtggctcatgcctgtaattccagcactttgggaggccgaggcaggtggatcacctaaggtcaggagttcgtagaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840997 446 + 60714840 ctaaaagtacaaaaatcagctgagcgtggctgtgtac--ctctgctcccagttactcgggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagtgaactgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaa---------------------aaaGGCGCCTTTTTAATCACTCACTGACACATGTAGAGGAGCAAAAAGTTTGAGTTGCTGGTTGgcccaggaggtcaaggctgcagtgagccaagctggtgttaccacactccagcctgggcaactgagtgagaccatgtttcaaa----aaaTTAAGTggccgggtgcagtggctcatgcctgtaattccagcactttgggaggctgaggcaggtggatcacctaaggtaaggagtttg-agaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 4096 432 + 138250 ctaaaagtacaaaaattagctgggcatggctgtgcacgtctgtgctctcagctactcaggaggctgaagtgggagaatcacttgagcctgggaggaagaagttacagtgaactgaga----------gcactccagcctggatgacagagtgagatcctgtctcaaaaaaaaaaaaaaaaa---------aaaGGCACCTTTTTAATCACTCACTGACACGGGCAGAGGGGCAAAAAGTTTGAGTT---------------aggtcgaggctgcagtgagccaagatggtgccaccacactccagcctgggcaacagagtgagaccttgtctcaaaagagaaaagaaGTggctgggcacggtggctaacactagtaatcccagcactttgggagactgaggcgggtggatcaactgagatcaggagttcg-agaccagcctggcc----------aacatggtgaaaccacgtctct i calJac3.chr22_GL285922_random C 0 I 1 e canFam3.chr1 20057633 3553 - 122678785 I e nomLeu3.chr10 103351147 0 - 106955855 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=141056.000000 s hg38.chr19_GL949748v2_alt 976331 191 + 1064304 ctaaaaccacaaaaatcaggcaggcatggtggcacatagctataatctcatctacttg-------gaggcacgagaactgcttgaatccaggaggcagaggctacagtgagccgagatcatgccacagcactccagccctggcgagagagcaagact--gtctcaa---agaataaCTTCAAAGATGGaagt-------tatttaacctc s panTro4.chr19 59910865 191 + 63644993 ctaaaaccacaaaaatcaggcgggcatggtggcacatagctataatctcatctactcg-------gaggcacgagaactgcttgaatccgggaggcagaggttacagtgagccgagatcatgccacagcactccagccttggcgagagagcaagact--gtctcaa---agaataaCTTCAAAGATGGaagt-------tatttaacctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56841443 189 + 60714840 ataaaaccacaaaaattaggcgggcatggtggcacatagctataatctcatctacttg-------gaggcacaagaactgcttgaatccaggaggcagaggttacagtgagccgagatcatgccacagcactccagccttggcgatagagcgagact--gtctcaa---agaataaCTTCAAAGATGGAAGT-------TATTTAAc--c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351147 191 - 106955855 ctaaaaccacaaaaattagccgggcgtggtggcacatagctataatctcatctattgg-------gaggcacgagaactgcgtgaattcaggaggcagaggttacagtgagctgagatcatgccacagcactccagccttggcaatagagcgagact--gtctcta---agaataactttaaagacggaagt-------tatttaacctc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 4529 210 + 138250 ttaaaaacacaaaaattagccaggcatggtggcacatagccataatctcgtctatttgggagactgaggcacgagaattgcttgaatctgggaggccgaggttgcagtgacccaggatcaccccatagcactcaagcctcgatgacagagcgagactccatctcaaaaGagagtaacttataagatggaagttacttaatacttaaccgc i calJac3.chr22_GL285922_random I 1 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=337210.000000 s hg38.chr19_GL949748v2_alt 976522 371 + 1064304 tctgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacgatggcttcagggtcttctgtgagctggccactgcttacctatgacctcatct-tgacaatcctccctgtctca--ctcatgcccgctgcctggatgttctattttacgtgtcagtcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaactcccccccgag----ctctatgactcggtctcttcacccc-------------ctCACCT-----CCAACCATTGTAGCCAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGCCCTTCAGAACCCCT-------------CATCGCCTCCATAT-TTTCCTGTTAGCAGATGAGCCCTGAGGGCGGAGA s panTro4.chr19 59911056 371 + 63644993 tctgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacaatggcttcagggtcttctgtgagctggccaccgcttacctatgacctcatct-tgacaatcctccctgtctca--ctcatgcccgctgcctggatgttctattttacgtgtcagtcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaactcccccccgag----ctctatgacttggtctcttcacccc-------------cttACCT-----CCAACCATTGTAGCCAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGCCCTTCATAACCCCT-------------CATCGCCTCCATAT-TTTCCTGTTAGCAGATGAGCCCTGAGGGCGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56841632 369 + 60714840 tccgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacaatggcctcagggtcttctgtgagctggccaccgcttacctatgacctcatgt-tgacaatcctccctggctca--ctcatgcccgctgcctggatgttctatttcacatgtcaatcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaact-ccccccGAG----CTCTATGACTCAGTCTCTTCACCCC-------------CTCACCT-----CCAACCATTGTAGCCAGAA-CCCTCAGTTATTCCCTG--TACCCCTTGCCCTTCATAACCCCT-------------CATCACCTCCATAT-TTTCCTGTTAGCAGATGAG-CCTGAGAGCAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351338 370 - 106955855 tctgctcaaaagcctcagtgcttccctatgtcaatctaggtaaaatcctatattgacgacggcctcgccgtcttctgtgagctggccaccgcttacctatgacctcatct-tgacaatcctccctggctca--ctcctgcccgctgcctggatgttctattttacgtgtcaatcacatgcatcttcagggcctctgcacaagctatttctctgcctggagaact-ccccctgag----ctctatgacttggtcccttcacccc-------------ATCACCT-----CCAACCACTGTAGCTAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGTCCTTCATAACCCCT-------------CATCACCtccatat-tttcctattagcagatgagccctgagggcggaga i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 4739 349 + 138250 tctgctcaaaaccttcagctcttccctaggtcaatccaaataaaattctgtgtttacggtggcctcagggt---------------cacctcttacctgtgtcctcatct-ctacagtcctccctggctcactctcatgccggctgcctggatgttctgttctacatgtcaatcacatgcaaccccagggcctttgcacaagctctttctctgcctggagaacc----cccaaa----ctctgtgacccagtctctttaccct-------------gtcatct-----ccaacCATT-TAGCTGGAA-CTCCCAGTTACTCCCTGTATACACCTCGACCTT---AACCCCT-------------TGGACACTCCATAT-TTTCCTGTT---AGATGAGTCTTGAGGGCAGAGT i calJac3.chr22_GL285922_random C 0 I 8 s canFam3.chr1 20061186 401 - 122678785 tctggtcaaaatctccagtggttccccatctcgtcccaagtaaaatctgaagtttacaatggcctaagggccttttgtgaaatggctccctcttatctgtgacctcatctcttacaaccctccctggttcactctcaagctggctgtcttgatat--tgttttacatgataatcctccatgacctcaggacctttgcataagctatttctctgcctgaggaactcctactccagatctctctatggttcattctcttcacccctgaggtcttcatattgacctataggtcaactattgtagtgagcatcccccaatt----------ctccttttgcctttcatgacccttattggatatggcacaccacatatatctgtttcctattagcacatgagctcagagggaagaga i canFam3.chr1 I 3553 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=1314.000000 s hg38.chr19_GL949748v2_alt 976893 1 + 1064304 C s panTro4.chr19 59911427 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842001 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351708 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536801 1 - 59248254 c i macFas5.chr19 I 67842 C 0 s calJac3.chr22_GL285922_random 5096 1 + 138250 T i calJac3.chr22_GL285922_random I 8 C 0 s canFam3.chr1 20061587 1 - 122678785 c i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=5407.000000 s hg38.chr19_GL949748v2_alt 976894 11 + 1064304 Gtt----------ttgtttgt s panTro4.chr19 59911428 11 + 63644993 Gtt----------ttgtttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842002 11 + 60714840 Gtt----------ttgttggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351709 21 - 106955855 tttgttgttgttgttgttgtt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536802 11 - 59248254 gtt----------ttatgtat i macFas5.chr19 C 0 I 3 s calJac3.chr22_GL285922_random 5097 11 + 138250 GTT----------TTGTTTTT i calJac3.chr22_GL285922_random C 0 I 57 e canFam3.chr1 20061588 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=129168.000000 s hg38.chr19_GL949748v2_alt 976905 93 + 1064304 ttttt--gagaccggagtctcactct-gtcacccaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcga s panTro4.chr19 59911439 94 + 63644993 ttttt-tgagaccggagtctcactct-gtcacccaggctggagtgcaatggcgccatctcggctcactgcaacctccgcctcctgggttcaagcga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842013 93 + 60714840 ttttt--gagactggagtcccactct-gtcacccagactggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351730 94 - 106955855 tttttttgagact-gagtctcactct-gtcacccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcccgggttcaagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536816 92 - 59248254 tttat--gaga-tggagtttcactct-gttgcccaggctggagtgcagtggcatgatcttcactcactgcaacctctgcctcccaggctccagtga i macFas5.chr19 I 3 C 0 s papAnu2.chr19 3474716 92 - 51301725 tttat--gaga-tggagtttcactct-gttgcccagcctggagtgcagtggcacgatcttcgctcactgcaatctctgcctcccaggctccagtga i papAnu2.chr19 I 6558 C 0 s calJac3.chr22_GL285922_random 5165 93 + 138250 ttttt--gaga-cagagtttccttccggttgcccaggctggagtgcaatgacacaatcactgctcactgcaaactccagctcccgggttcaagcga i calJac3.chr22_GL285922_random I 57 C 0 e canFam3.chr1 20061588 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=16475.000000 s hg38.chr19_GL949748v2_alt 976998 12 + 1064304 ttctcctgcccc s panTro4.chr19 59911533 12 + 63644993 ttgtcctgcccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842106 12 + 60714840 ttctcctgcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351824 9 - 106955855 tt---ctgcctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536908 12 - 59248254 ttcttgtgcctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474808 12 - 51301725 ttcttgtgcctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 5258 12 + 138250 ttctcctgcttc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20061588 12 - 122678785 ttctcttgttcc i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=93418.000000 s hg38.chr19_GL949748v2_alt 977010 108 + 1064304 agcctcctgagtagctgggattacaggtgcctgtcaccacgcccagctaacttctgtatatttagtagagacacggttttaccatgtta----ggttggtcttgaactcctt s panTro4.chr19 59911545 108 + 63644993 agcctcctgagtagctgggactacaggtgcctgtcaccatgcccagctaacttttgtatatttagtagagacacggttttaccatgtta----ggttggtcttgaactcctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842118 107 + 60714840 agcctcctgagtagctgggactacaggtgcctgtcaccatgcccggctaacttttgtatttttagtagagacagggttttaccatgtta----ggctggtcttgaactcc-t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351833 107 - 106955855 agccttccgagtagctgggattacaggtgcccgccaccacgcccagctaacttttgtacttttagtagagacagggttttaaggtgtta----ggctggtcttgaactcc-t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536920 103 - 59248254 accttcccaagtagctggcattaaaggcactcaccaccatgtgtggctaatt--------ttttgtagagacggggtttcaccatgttggcctggctggtctcaaactcc-t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474820 103 - 51301725 accttcccaagtagctggcattaaaggcactcaccaccatgcgtggctaatt--------ttttgtagagatggggtttcaccatgttggcctggctggtctcaaactcc-t i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 5270 42 + 138250 agcctcccaaatagctgggactgtaggcacacaccaccacgc---------------------------------------------------------------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20061600 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=10904.000000 s hg38.chr19_GL949748v2_alt 977118 8 + 1064304 gacctcag s panTro4.chr19 59911653 8 + 63644993 gacctcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842225 8 + 60714840 gacctcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351940 8 - 106955855 gacctcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647134 7 + 64156825 gacctca- i rheMac3.chr19 I 21 C 0 s macFas5.chr19 3537023 8 - 59248254 gaactcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474923 8 - 51301725 gaactcag i papAnu2.chr19 C 0 n 0 e canFam3.chr1 20061600 0 - 122678785 C e calJac3.chr22_GL285922_random 5312 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I a score=1314.000000 s hg38.chr19_GL949748v2_alt 977126 1 + 1064304 g s panTro4.chr19 59911661 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842233 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351948 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3537031 1 - 59248254 g i macFas5.chr19 C 0 n 0 s papAnu2.chr19 47894218 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601902 1 + 50890351 g i chlSab2.chr6 I 146 C 0 e canFam3.chr1 20061600 0 - 122678785 C e calJac3.chr22_GL285922_random 5312 0 + 138250 C e rheMac3.chr19 60647141 0 + 64156825 C a score=189574.000000 s hg38.chr19_GL949748v2_alt 977127 71 + 1064304 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccaccgtgcccggccTGAGACTT s panTro4.chr19 59911662 71 + 63644993 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccagcgtgccctgccTGAGACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842234 71 + 60714840 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccactgtgcccggccTGAGACTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351949 71 - 106955855 tgatccatccaccttggcctcccaaagtgctgggattacaggcgtgagcccccgcgcccagcctgagactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647141 71 + 64156825 tgatccgcccacctgggcctccaaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788169 71 + 59248254 tgatccgcccacctgggcctccaaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894219 71 + 51301725 tgatccgcccacctgggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggcctaagactT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601903 71 + 50890351 tgatccacccgtcttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5312 51 + 138250 ------------------ctcccaaagtgctgaga-cacaggcctgagccactgcgcccggcc-GAGACTT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20061600 0 - 122678785 C a score=1168560.000000 s hg38.chr19_GL949748v2_alt 977198 362 + 1064304 C---TGTTGGTCATGCAGATCCCCAACACACGAGGGTGGGCTTGGCTTGCCGGAGGGCATCGATCAGCACTGGCTGCATTAACGTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACATGTTCCAGTGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGAGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT s panTro4.chr19 59911733 362 + 63644993 C---TGTTGGTCATGCAGATCCCCAACACACGAGGGTGGGCTTGGCTTACCGGAGGGCATCGATCAGCACTGGCTGCATTAACGTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACATGTTCCAGTGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGGGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842305 361 + 60714840 C---TGTTGGTCATGCAGATCCCCAACACCCGAGGGTGGGCTTGGCTTACAGGAGGGCATCGATCAGCACTGGCTGCATTAACATGTTGATTTCTGTGTTT-CCC---AGGTTGTGGGGATGTTCCATCCCTCTGTTCAGTTGTGAAGACCTCTGTTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGTTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACACATCCCAATGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGAGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGAAGA------CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352020 355 - 106955855 c---tgttggtcatacagatccccaacacccgagggggggcttggcttataggagggcatcgatcagcaccggccgaattaacgTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACACGTCCCAATGGCACCCTTCAGACACTCAGGT-------GTTTACTTCCCCATCAGGCTTTCTCCAGAGTGGCAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647212 359 + 64156825 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCATTTCTGTGTTTCCTC---AGGTTGTGGGGGTGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788240 359 + 59248254 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCATTTCTGTGTTTCCTC---AGGTTGTGGGGATGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894290 365 + 51301725 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCAGTTCTGTGTTTCCTC---AGGTTGTGGGGATGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTCAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCCATTTACTTCCCCGTCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGACTGATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601974 362 + 50890351 GTGTTGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCGGCACCAGCTGAATCAGCGTGCTCATTTCTGTGTTTCCTC---AGGCTGTGGGGATGTTCTATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTTCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5363 361 + 138250 C---TGTTGCTCATGCAGATCCCCAACACCCAAGGGTGCACCTGACTCACAGGAGGGTGCCGGTCAGCACTGGCTGAACAAACGTGTTGATTTCTGCCTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGGCCAGCTGTGAGAACCTCTGCTGTGTCCTCAGCTGCAACCAGACCCTCATCACTCTGGACCTGGGCCAGAATTCCTTGGGGTATAGTGGAGTAAAGTTGCTGTTTGAAACCTTGACACGTCCAAATGGCACCCTCCAGACACTCAGGTACGATCCACGTACTCCCCC-TCAGGTATTCTCCGGGGTAGTAGGTTT--AGGGGAAGCATAATCACAGGAATCTGCCGTAGGAGA------CT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20061600 353 - 122678785 c---tgttg--------gatacccaacacccaggcgtatgtctggcatataggatggtatcagtaaacattggttgaatga-----CCTAATTTTGTGTCTCCCCTATAGGTTGTGGGGATGTGCCATCACTCCTTTCAGCTCTGAAATCCTCTCATCTGCCCTTGGCAGAAATCAGAGCCTGGTCACACTGGACCTGGGCCAGAATTCCTTGGGGTATAGTGGAATAAAGATGCTGTGTGATACCTTGAAACTTCACTGTTCCTCCCTCCGGACACTCAGGTATGATCCTCCTGCTGTTCAGT-GTTTTTCCTCCATGATGGTAGGTTTGCAAGGGGAGCACAAACCACAGGAATTGTTGTAGGCAA------CT i canFam3.chr1 C 0 I 757 a score=18278.000000 s hg38.chr19_GL949748v2_alt 977560 6 + 1064304 GATCTG s panTro4.chr19 59912095 6 + 63644993 GATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842666 6 + 60714840 GATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352375 6 - 106955855 GATCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647571 6 + 64156825 GATCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788599 6 + 59248254 GATCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894655 6 + 51301725 GATccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47602336 6 + 50890351 GATCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5724 6 + 138250 GATCCG i calJac3.chr22_GL285922_random C 0 I 456 e canFam3.chr1 20061953 757 - 122678785 I a score=1822264.000000 s hg38.chr19_GL949748v2_alt 977566 733 + 1064304 gtagctgg-attacaggttcccgccatcacacccagccaatttctgtatttcacttggagaaacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagcaaccgcacccggccACC-tttttttttttttt--------cctttgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggctcgctccagctcctgggctcaagcaa---tcctgcctcagttcctgagtaggtaggtttataagcatgaaccattgcacccagcCACGGCTGC-CGTCTACCTGCTCATGATAGCCATTTGTCACTGGGCTGTGTTTTGTTTGTTGCATTTTGTCAGGGTTTTGGGGTTTTGTTTTGtttt--------ttctttctttttttttttttttttctgagatggagtctcactctgttgcccaggctggggtgcagtggt-------------tgctaactgcaacctccacctcccaggttccagctattctcatgcttcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtggtctcaaactcctgacctc-cgtgatttgcccacctcagcatcccaaagtgctgggattacaggcatgag--ccaccgcaccc s panTro4.chr19 59912101 705 + 63644993 gtagctgg-attacaggttcccgccatcacacccagccaatttctgtatttcacttggagaaacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagcaactgcacccggccACCttttttttttttttt--------cctttgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggcttgctccagctcctgggctcaagcaatcctcctgcctcagttcctgagtaggtaggtttataagcatgaaccattgcacccagcCATGGCTGC-TGTCTACCTGCTCATGACAGCCAGTTGTCACTGGGCTGT-------------------------GTTTTGGGGTTTTGttttgtttt--------ttc-------ttttttttttttttctgagatggagtctcactctgttgcccaggctggggtgcagtggt-------------tgctaactgcaacctccacctcccaggttccagctattctcatgcctcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtggtctcaaactcctgacctc-ggtgatttgcccacctcagcatcccaaagtgctgggattacaggcatgag--ccaccgcaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842672 740 + 60714840 gtagctgg-attacaggttcccgccaccagacccagccaatttctgtatttta---gtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcagatgatcca-ctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccACCttttttttttttttttttttttacctttgaggcaagaactcactgtat-tccccaggct-gagtccagcagtacaatgatggctcgctgcaggctcgctccagctcctgggctcaagcaatcctcctgcctcagttcctgagtaactaggtttataagcatgaaccattgcacccagccaCGGCTGC-TGTCTGCCTGCTCATGAGAGCAAGTTGTCACTGGGCTGTGTTTTGTTTGTTGCATTTTGTCAGGGTTTTTGGGGTTCGTttttttgt--------ttt--ttgttttttgttttgttttctgagatggagtctcactctgttgcccaggctggagtgcagtggt-------------tgctaactgcaacttccacctcccaggttcaagctattctcatgcctcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtgatctcgaacttttgacctc-ggtgatttgcccacctcagcgtcccaaagtgctgggattacaggcatgagccccaccgcaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352381 730 - 106955855 gtagctgg-attacaggttcccgccaccacacccagccaatttctgtatttt--tagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggattacaggcatgagctaccgtacccagcc-----------Ctttatt--------tcttcgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggctagctccagctcctgggctcaagcaatccttctgcctccgttcctgagta-ctaggtttataagcatgagccattgca-ccAGCCACGGCTGC-TGTGTACCTGCTCATGAGAGCCAGTTGTCACTGGGCTGCgttttgtttgttgcattttatcagggttttggggttttgttttgttttgcttttcctttttttttttttttttttttttcctgagatggagtctcactctgttgcccaggctgggttgcaatggt-------------tgctaactgcaacctccacctcccaggttcaagctattctcatgcttcagcctcccaagtagctgggattacaggcatgcaccaccacacccagctaatttttgtatttttagtagagacagggttttgccatgttggccagggtgctctcgaactcttgagctt-ggtgatttgcccacctcagcgtcccaaagtgctgggattataggcatgag--tcactgcaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647577 710 + 64156825 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------Ctttttttt--------ccttggaggcaagaactcactctgt-tccccaggctggagtccagcagcacagtgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagttcctgagtagccaggtttgtaagcatgaaccattgcacccagccaTGGCTGCTTGTCTACCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGTTGGGTTTTGTTGGGGTTTTGG-gttttgttttgtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccaggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcaaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcatgag--ccaccgcaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788605 710 + 59248254 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------Ctttttttt--------ccttggaggcaagaactcactctgt-tccccaggctggagtccagcagcacagtgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagtttctgagtagccaggtttgtaagcatgaaccattgcacccagccaTGGCTGCTTGTCTGCCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGTTGGGTTTTGTTGGGGTTTTGG-gttttgttttgtttt----------------------gttttgttttCtgagatggagtctcgctctgttgcccaggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcaaactcctgacctt-ggtggttcacccacctcagcatcccaaaatgctaggattacaggcatgag--ccaccgcaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894661 702 + 51301725 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagatgggctttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------c-ttttttt--------ccTTGGAGGCAAGaactcactctgt-tccccaggctggagtccagcagCACAGTGATGGCTC-----------ACcccagttcctgggctcaagcaatcctcctacctcagttccTGAGTAGCCAGGTTTGTAAAcatgaaccattgcacccagccatgGCTGCTTGTCTACCTGCTCGCGAGAGCCAgttgtcattggattgtgttttgtttgttgggttttgttggggttttgg-----------gtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccaggctggggtatggTGGTGTAGTAgtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtcttgaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcatgag--ccaccgcaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47602342 705 + 50890351 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgtacccagcc---------Ctttttttt--------ccttggaggcaagaactcactgtgt-tccccaggctggagtccagcagaacaatgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagctcctgagtagctaggcttgtaagcatgagccattggacccagccaTGGCTGCTTGTCTACCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGCTGGGTTTTGTTGGGGTTTTGG------Gttttgtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccgggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcgaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcgtgag--ccactgcaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 6186 686 + 138250 gtagctgggattacaggtggctgccaccacgcctggctgatttctgtatttt--tagtagagacagggttttaacatgttggctaggctgatctcgaactcctgacctcaggtgatctacctgtttcagcctcccaaagtgctgggattataggtgttagccaccatgaccagcc---------Cttttttgt--------tttttgaggcaagaactcactatgtccccccaggctggagtcgagcagcacgacgacagttcgctgcaggctcaccccacctcctgggctcaagccgtcctcctgcctcactcccggagtagctaggtttac---catgagccatggcacccagccaTGGCTGC-TGTCTATCTGCTCATGAGAGCCAGTTGTCACTGGGTTGTGTTTT-TTTGTTTGATTTTTTTGGTGGGGTGGGGA--------GGCtt----------------------------------gagaaggagcgttgctctgttgcccaggctggagtgcagtggt---gtgat-----atctaactgcaacccctgcctcccagg---------ttctcgtgcctcagccccccaagtaggtgggattacaggcataagccatcaaatccagctaatttttgtatttttagtagagacggggttttgccatgttggccagcctggtcttcaaatgctgacctcaggtaatccacctgccttggcctgccaaagtgctgggattacaggcatcag--ccaccacacc- i calJac3.chr22_GL285922_random I 456 C 0 e canFam3.chr1 20061953 757 - 122678785 I a score=40910.000000 s hg38.chr19_GL949748v2_alt 978299 15 + 1064304 ggccTGAGTTGTATT- s panTro4.chr19 59912806 15 + 63644993 ggccTGAGTTGTATT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843412 15 + 60714840 ggccTGAGTTGTATT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353111 15 - 106955855 ggcctgagttgtatt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60648287 15 + 64156825 agccTGAGTTGTATT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789315 15 + 59248254 agccTGAGTTGTATT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895363 15 + 51301725 agcctgagttGTATT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603047 15 + 50890351 agccTGAGCTGTATT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 6872 9 + 138250 ------AGCtatatt- i calJac3.chr22_GL285922_random C 0 I 893 s canFam3.chr1 20062710 16 - 122678785 GACCTGTGTTGTCTAC i canFam3.chr1 I 757 C 0 a score=481332.000000 s hg38.chr19_GL949748v2_alt 978314 218 + 1064304 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAATGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAAACTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----gtttgtt--t s panTro4.chr19 59912821 218 + 63644993 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAAACTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----Gtttgtt--t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843427 218 + 60714840 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAATCTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATAGACACTAAGGTTTTTTTTAAGCTTTAA-----Gtttatc--t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353126 212 - 106955855 TCGATACCATGGCGTCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTCAAAATAATCTTTATGTAGAAGAAAC--AGATTACTTGTTTATTTAACACAAATCTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----Gtt------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60648302 213 + 64156825 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTATGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGATGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttattt-- i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55789330 212 + 59248254 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGACGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttatt--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895378 212 + 51301725 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGgcttaaaataatctttatgtaGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGACGTTAAGGG-CTTTTTCagctttga-----gtttatt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603062 217 + 50890351 TCAATACCATGGCGTCAAAGAACCAAG-ATCCCCTTCCTAGAAGTTTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATACAATCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTACTTAACACGAATCTCAGCCTAAGATACTTTGCAAGTCAAAAGACATCTGGACGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttatt-t- i chlSab2.chr6 C 0 I 10 s canFam3.chr1 20062726 218 - 122678785 TTGCTACCATGGCAACAAAGAACAGTA-CAACTTTTCTTGGTCTTACCCAAGCTTGTTTAAATACTCAGATGCAAAAACAAACAAAAAGAAATACTCAGATGCAATGTAGACAACCAATGGCTTGAAATGATAATTATGTAGAAGGAAC--AGATTATATATGTACTCAAC---------------AGGTAGCTTGCTAGTCAAAAG-------------AAGGG-ATTTATAGACTCTGACATTTGTTT------ i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 6881 893 + 138250 I a score=3689.000000 s hg38.chr19_GL949748v2_alt 978532 9 + 1064304 gtttgttta s panTro4.chr19 59913039 9 + 63644993 gtttgttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843645 9 + 60714840 atctattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353338 4 - 106955855 -----ttta i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20062944 9 - 122678785 CTGTGTTTA i canFam3.chr1 C 0 I 1205 e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895590 0 + 51301725 C e macFas5.chr19 55789542 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I a score=5543.000000 s hg38.chr19_GL949748v2_alt 978541 20 + 1064304 ttta-----ttatttatttTGGAGA s panTro4.chr19 59913048 25 + 63644993 tttatttatttatttattttggaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843654 20 + 60714840 ttta----tttattta-tttggaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353342 20 - 106955855 ttta----tttatgtt-tttggaga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55789542 9 + 59248254 ----------------ttttggaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895590 9 + 51301725 ----------------ttttggaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e rheMac3.chr19 60648515 10 + 64156825 I a score=637.000000 s hg38.chr19_GL949748v2_alt 978561 13 + 1064304 C--AGTTTTACTCTT s nomLeu3.chr10 103353362 15 - 106955855 cagagttttgctctt i nomLeu3.chr10 C 0 I 1521 e canFam3.chr1 20062953 1205 - 122678785 I e ponAbe2.chr19 56843674 0 + 60714840 C e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895599 0 + 51301725 C e macFas5.chr19 55789551 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I e panTro4.chr19 59913073 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949748v2_alt 978574 580 + 1064304 TTTTTTGGGGTGCATCttttttcttttttttttttttttttcctttttttttttttttttttttattgatcattcttgggtgtttctcacagagggggatttggcagggtcataggacaatagtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcggccttccgcagcgtttgtgtccctgggtacttgagattagggagtggtgatgactcttaacgagcgtgctgccttcaggatctgtttaacaaagcatatcttgcaccgcccttaatccgtttaactctgagtggacacagcacatgtttcagagagcacggggttgggggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaaatggggggctgacccccccacctccctcccggacagggcggctggccggttagaggggctcctcacttcccattaggggcggccgggcagaggcgcccctcacctcccggacagggcggctggctgggcggggggctgacccccccacctccccGCCCGGC e canFam3.chr1 20062953 1205 - 122678785 I e ponAbe2.chr19 56843674 0 + 60714840 C e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895599 0 + 51301725 C e macFas5.chr19 55789551 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I e panTro4.chr19 59913073 0 + 63644993 C a score=1187.000000 s hg38.chr19_GL949748v2_alt 979154 2 + 1064304 ca s panTro4.chr19 59913073 2 + 63644993 ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843674 2 + 60714840 ca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55789551 2 + 59248254 cg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895599 2 + 51301725 cg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47603279 10 + 50890351 I e rheMac3.chr19 60648515 10 + 64156825 I a score=484265.000000 s hg38.chr19_GL949748v2_alt 979156 276 + 1064304 gagttttactcttgttgtccagcctggagcgcaatggcgctatctcggcttactgcaacctccgcctcccgggttcaagaggttctcctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaatcttgtatttttaatagagaca--gggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctaagattacaggcgtgagccaccatgcctggcc s panTro4.chr19 59913075 275 + 63644993 gagttttactcttgttgcccagcctgg-gcgcaatggcgctatctcggctcactgcaacctccgcctcccgggttcaagaggttcttctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaatcttgtatttttagtagagaca--gggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctaagattacagccatgagccgccatgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843676 278 + 60714840 gagttttactcttgttgcccagcctggagtgcaatggcgctatctcggctcactgcaacctctgcctcccggattcaagaggttctcctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaattctgtatttttagtagagacacggggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacctgcctgcctcagcctcccaaa-gtgctaagattacaggcatgagccaccacgcctggcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648525 275 + 64156825 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccatgtagctgggattacaggcatctg-taccacgtctggctcattttgtatctgtagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctgggcttacaggcgtgagccaccgcgcctggcc i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55789553 275 + 59248254 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggattacaggcatgtg-taccacgtctggctcattttgtatttttagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctgggattacaggcgtgagccaccgcgcctggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895601 275 + 51301725 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggactacaggcatgtg-taccacgtctggctcattttgtatttttagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgactgcaggtgacccgcctgcctcagcctcccaaa-gtgctgggattacaggcgtgagccaccacgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603289 276 + 50890351 gagttttgctcctgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggatcacacgcatgtg-taccatgtctggctcattttgtatttttagtagagaca--gggttgctccatgttggtcaggctggtcttgaactcctgacttcaggtgacccgcctgcctcggcctcccaaaggtgctgggattacaggcatgagccaccgtgcctggcc i chlSab2.chr6 I 10 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I a score=57447.000000 s hg38.chr19_GL949748v2_alt 979432 25 + 1064304 TGCATCTCCTCTGTTTAAC-TGGTAC s panTro4.chr19 59913350 25 + 63644993 TGCATCTCCTCTGTTTAAC-TGGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843954 25 + 60714840 TGCATCTCCTCTGTTTAAC-TGGTAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648800 26 + 64156825 TGCATCTCCTCTGTTTAACCTGGTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789828 26 + 59248254 TGCATCTCCTCTGTTTAACCTGGTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895876 26 + 51301725 tgcatcTCCTCTGTTTAACCTGGTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603565 26 + 50890351 TGCATCTCCTCTGTTTAACTTGGTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7774 25 + 138250 TGCATCTCCTCTGTTGAAC-TGGTAC i calJac3.chr22_GL285922_random I 893 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e nomLeu3.chr10 103353377 1521 - 106955855 I a score=427888.000000 s hg38.chr19_GL949748v2_alt 979457 183 + 1064304 TCCGGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCGGGTAAGCAGGTATTAGAGCTATAGCCCAGCTGTACTCAGCAATTCCAT-TTTCTGTGTATGATAATCAACAAGCATCTCAAACTGCACAATGGCTATATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC s panTro4.chr19 59913375 183 + 63644993 TCCGGGGTCCACCGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCGGGTAGGCAGGTATTAGAGCTATAGCCCAGCTGTACTCAGCAATTCCAT-TTTCTGTGTATGATAATCAACAAGCATCTCAAACTACACAATGGCTATATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843979 183 + 60714840 TCCGGGGTCCACCGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCAGGTAGGCAGGTATTAGAGCTATAGCCCAGCTGTATTCAGCAATTTCAT-TTTCTGTGTATGATAATCAACAAGCATCTAAAACTACACAGTGGCTTTATACCATTACAAGGTTAATCTGATGTTATGTTTTTCTCTATC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648826 180 + 64156825 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789854 180 + 59248254 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895902 180 + 51301725 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTATAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603591 179 + 50890351 TCTTGGGTCCACTGACTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCGCACTCAGCAATT-CAT-TTTCTGTGCGTGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCACTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7799 179 + 138250 TCCTGGGTCTCCCAAGTAGAAGTTGCCAAGGTGGGTGATGGAGCAGGTAGGCAGGTATTGGCGCTGTAGCCCAGCCGTACCCCGCAATTCCA--TTCCTCTGAATGATCATCAGCAAGCATCTAAAACTGCACAGTGGCTTTACACCATGACAGGGTTAATC---TGCTATCTTCTCCTCTATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064158 175 - 122678785 TCCTGGGTCCACGAAATAGAAGTTACCAAAGTGAGCTGTGTA----GTAGGCAGGTATTAGAATTAAATCCTGGATGTATCAATCAATTCCATCTCTCCAAACATGATA---CGAGATCACCCAAGATCATTCAACCATGCAAAAGCATTACAACATTAACCTGGTAT--TCTCTTTCCCTACC i canFam3.chr1 I 1205 C 0 e nomLeu3.chr10 103353377 1521 - 106955855 I a score=90709.000000 s hg38.chr19_GL949748v2_alt 979640 44 + 1064304 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA s panTro4.chr19 59913558 47 + 63644993 ATCAGATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56844162 47 + 60714840 ATCAGATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60649006 42 + 64156825 A---GATCAACATGGTTGAGAATA---------AGGAATG-AAAAAAAGGATTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790034 44 + 59248254 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47896082 44 + 51301725 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-aaaaaaaggattaa i papAnu2.chr19 C 0 I 984 s chlSab2.chr6 47603770 44 + 50890351 A---GATCAACATGGTTGAGAATA-------AGAGGAATGAAAAAAAAGGATTA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7978 51 + 138250 A---GATCAACATGGCTGGGAACAAGAAGAAAGAGGAATG-AACAAAAGGATTAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e nomLeu3.chr10 103353377 1521 - 106955855 I a score=436022.000000 s hg38.chr19_GL949748v2_alt 979684 291 + 1064304 AAAGAGAAATGAAAGTCTTTAATATTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtgcaggggcccgatctcagctcactgtaacctccgcctcccaggttcaagtgattctcctgtgtcagcttcctgagtagctgggattatagggatgcaccatcacacccaactaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca s panTro4.chr19 59913605 291 + 63644993 AAAGAGAAATGAAAGTCTTTAATTTTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtgcaggggcccgatctcagctcactgtaatctccgcctcccaggttcaagtgattctcctgtgtcagcttcctgagtagctgggattatagggacgcaccatcacacccaactaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56844209 292 + 60714840 AAAGAGAAATGAAAGTCTTTAATTTTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtacaggggcccggtctcggctcactgtaacctccacctcccaggttcaagtgattctcctgtgttagccccctgagtagctgggactatagggacgcaccatcatacccagctaacttttatattttta-gta-----gagatggacttttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacttcaagtggtctgcccacctcA i ponAbe2.chr19 C 0 M 764 s rheMac3.chr19 60649048 282 + 64156825 AAAGAGAAATGAAAGTCTTTAATTTTACAttttatt---------atttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtggcccgatctcggctcactgtaacatccacctcccaggttcaagtgattcttctgtctcagcctcctaagtagctgggactataggcatgcaccatcacacccagctaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790078 282 + 59248254 AAAGAGAAATGAAAGTCTTTAATTTTACAttttatt---------atttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtggcccgatctcggctcactgtaacatccacctcccaggttcaagtgattcttctgtctcagcctcctaagtagctgggactataggcatgcaccatcacacccagctaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccccctca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47603814 276 + 50890351 AAAGAGAAATGAAAGTCTTTAATTTTGCAtttta-------------ttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtagcccgatctcggctcactgtaacatccacttcccaggttcaggtgattctcctgtctcagcctcctgagtagctgggactataggcacgtaccatcacacccagctaac--ttatattttta-gta-----gagatggac-attcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 8029 312 + 138250 AAAGGGAAATGAAAGTCTTTAAttgt--------tt---------atttatttctgagac-aagatctcattctgttgctcaggcctggagtgcagtggcctgatcttggctcactataacctctgcctcccagactgaagtgattctcctgcctcagcctcctgagtagctgcggctataggtgtgtacctccacacccagctaacttttatatatatatatatttatgagacggag-tttcactcttgttacccaggctggagtgcaatggcacgatctcggttcaccgcaacctccgccttctgggttcaagcagttctcctgcctca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=60030.000000 s hg38.chr19_GL949748v2_alt 979975 60 + 1064304 ctctcccaaagtgctggcattacaggcatgacccaccacatctggccTCATTTTATATTT s panTro4.chr19 59913896 60 + 63644993 ctctcccaaagtgctggcattacaggcatgacccaccacatctggccTCattttatattt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649330 60 + 64156825 ctctctcaaagtgctggcattataggcatgacccaccacatctggccTCattttatattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790360 60 + 59248254 ctctctcaaagtgctggcattataggcatgacccaccacatctggccTCATTTTATATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47604090 57 + 50890351 ctctctcaaagtgctcgcattataggc---acccaccacatctggccTCATTTTATATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 8341 60 + 138250 gcctcctgagtagctgggattacaggcacgtgccaccatgcccagcgaatttttgtgttt i calJac3.chr22_GL285922_random C 0 I 1056 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=174713.000000 s hg38.chr19_GL949748v2_alt 980035 209 + 1064304 AAAAATAAAAAATAAGCAAATCAAGCCAGGTAcagtttaggcaacatggtaaaaccccaactctactaaaaatacaaaaattagctgagcatggtggcaggtgcctgtagtcccagctactcgggaggcagaggataggatggcttgaacccaagaggcacaggttgcagtgagctgagatggtaccactgcactccagcttgggcaac s panTro4.chr19 59913956 209 + 63644993 aaaaataaaaaataaGCAAATCAAGCCAGGTAcagtttaggcaacatggtaaaaccccaactctactaaaaatacaaaaattagctgagcatggtggcaggtgcctgtagtcccagctactcgggaggcagaggataggatggcttgaacccaagaggcacaggttgcagtgagctgagatggtaccactgcactccagcctgggcaac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649390 204 + 64156825 aaaaat---aaataaGC-AATCAGGCCAGGTGCGgtctgggcaacgtggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgaggtggtgccactgcactctatcctgggcgac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790420 204 + 59248254 AAAAAT---AAATAAGC-AATCAGGCCAGGTGCGgtctgggcaacgtggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgagatggtgccactgcactctatcctgggcaac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47604147 204 + 50890351 AAAAAT---AAATAAGC-AATCAGGCCAGGTGCGgtctgggcaacatggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgagatggtgccactgcactctatcctgggcaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=1692.000000 s hg38.chr19_GL949748v2_alt 980244 3 + 1064304 aga s panTro4.chr19 59914165 3 + 63644993 aga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649594 3 + 64156825 aga i rheMac3.chr19 C 0 I 7 s chlSab2.chr6 47604351 3 + 50890351 aga i chlSab2.chr6 C 0 I 7 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I e macFas5.chr19 55790624 0 + 59248254 C a score=26406.000000 s hg38.chr19_GL949748v2_alt 980247 319 + 1064304 gagactgtctttttttttttttttttttttttttttttttttttttttGAGAtcgcccaggctggagtacagtggcacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgtccgccaccacgcccggctaattttttgtatttttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctgctgacctcgtgatccacccgcctcagcctcctaaagtgctgggaattacaggcgtgagccatcacgccccacctg s panTro4.chr19 59914168 298 + 63644993 gagactgtcttttttttttttttttttt--------------------gagatcgcccaggctggagtacagtggcacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgtccgccaccacgcccggctaattttttgtatttttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctcctaaagtgctggga-ttacaggcatgagccatcacgcctcacctg i panTro4.chr19 C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47604354 7 + 50890351 I e papAnu2.chr19 47896126 984 + 51301725 I e macFas5.chr19 55790624 0 + 59248254 C e rheMac3.chr19 60649597 7 + 64156825 I a score=6095.000000 s hg38.chr19_GL949748v2_alt 980566 12 + 1064304 agactgtctttt s panTro4.chr19 59914466 12 + 63644993 agactgtcttta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354898 12 - 106955855 agactgtcttta i nomLeu3.chr10 I 1521 C 0 s macFas5.chr19 55790624 10 + 59248254 agactgtctc-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897110 10 + 51301725 agactgtctc-- i papAnu2.chr19 I 984 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e chlSab2.chr6 47604354 7 + 50890351 I e rheMac3.chr19 60649597 7 + 64156825 I a score=1092.000000 s hg38.chr19_GL949748v2_alt 980578 2 + 1064304 aa s panTro4.chr19 59914478 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354910 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 9457 2 + 138250 aa i calJac3.chr22_GL285922_random I 1056 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e chlSab2.chr6 47604354 7 + 50890351 I e papAnu2.chr19 47897120 0 + 51301725 C e macFas5.chr19 55790634 0 + 59248254 C e rheMac3.chr19 60649597 7 + 64156825 I a score=25602.000000 s hg38.chr19_GL949748v2_alt 980580 13 + 1064304 aaaaaaaaaaaaa s panTro4.chr19 59914480 13 + 63644993 aaaaaaaaaaaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354912 11 - 106955855 aaaaaaaaaaa-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649604 13 + 64156825 aaagaaaaaaaga i rheMac3.chr19 I 7 C 0 s macFas5.chr19 55790634 13 + 59248254 aaagaaaaaaaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897120 13 + 51301725 aaagaaaaaaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604361 13 + 50890351 aaagaaaaaaaga i chlSab2.chr6 I 7 C 0 s calJac3.chr22_GL285922_random 9459 13 + 138250 aaaaaaaaaaaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M a score=101607.000000 s hg38.chr19_GL949748v2_alt 980593 39 + 1064304 aa--------aTCAATGTGGAACACTCC-TTTGCCACCTAGAATAATC s panTro4.chr19 59914493 47 + 63644993 aagaaagaaaaTCAATGTGGAACACTCC-TTTGCCACCTAGAATAATC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354923 38 - 106955855 ----------aTCAATGTGGAACACTCCTTTTGCCACCTAGAATAATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649617 39 + 64156825 aa--------aTCAATATGGAACACTCC-TTTGCCACGTAGAATAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790647 39 + 59248254 aa--------aTCAATATGGAACACTCC-TTTGCCACGTAGAATAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897133 39 + 51301725 aa--------atcaatatggAACACTCC-TTTGCCACCTAGAATAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604374 39 + 50890351 aa--------aTCAATATGGAACACTCC-TTTGCCACCTAGAATAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 9472 39 + 138250 aa--------aTCAATATGGAATGCTCC-TTTGCCACACAGAATAATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064333 39 - 122678785 AA--------ATCAATATGGAACCCTGA-TTTGCAGCATACAGTAATC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56844501 764 + 60714840 M a score=1563064.000000 s hg38.chr19_GL949748v2_alt 980632 531 + 1064304 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATCGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATTGATACTGAGAAACATCATCCCTGGGCAGAAAGGCCTTCTTCTCATGACTTCATGATCTGAAT-CCCCCCGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTCCTCCCCGGCCCCTACCCCTCAGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAT-----ACCTGCACACATC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGCTTTGACAAGTTAGAG s panTro4.chr19 59914540 531 + 63644993 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAA-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATTGATACTGAGAAACATCATCCCTGGGAAGAAAGGCCTTCTTCTCATGACTTCATGATCTGAAT-CCCCCTGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTCCTCCCCCGCCCCTACCCCTCAGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAC-----ACCTGCACACGTC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGCTTTGACAAGTTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845265 530 + 60714840 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTCCTTGGGAATTTGAAACAAATCTCCTTCATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATCGATACTGAGAAACATGATCCCTGGAAAAAAAGGCCTTCTTCTCATGACTTCGTGATCTGAATCCCCCCCGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTC--CTCCTCCCCCGCCCCCACTCCTCGGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATAGGCTTTGACAAGTTAGAG i ponAbe2.chr19 M 764 C 0 s nomLeu3.chr10 103354961 522 - 106955855 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATAACTTTAATGATGAACTCGATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGGCCTTCTTCTCATGACTTCATGATCTGAATCCCCCCTGAGTCATTCATTCTCCG-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCTGGTGACTC--CTCCTCCCCCGCCCCCACTCCTCAGGGATCATGAGTTCATTGCTGGGCTAGGTGT---TTTAGCCATGATTCTGCCTCTGTTTGAC-----ACGTGCACACGTC----------CTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCAATCACAAGTGAAGCTGTTACT---TAATGGGCTTTGACAAGTTAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649656 514 + 64156825 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTTGATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCGTTCATTCTCCA-TGAAGTCGTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGCTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGACTTTGACACGTTAGAG i rheMac3.chr19 C 0 I 305 s macFas5.chr19 55790686 514 + 59248254 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATAAACAAAGTAACCTTTTCCTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCGTTCATTCTGCA-TGAAGTCGTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGCTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGACTTTGACACTTTAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897172 510 + 51301725 AGGAAAGGTGA----------------CCT---------CAACAGAATTTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCTCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGctggaagaaatagaagaaaacaacccACAACTGATTATTGATACTGAGAAACATGATCCCCGGaaaaaaaGACCTTCTGCTCATGACTTCATGATCTGAATCCCCCC-GAGTCGTTCATTCTCCA-TGAAGTCgttgattttccaggtgttggtGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGTTCACTGCTAAGCTAGATGT---TTCAGCCATGGTTCTACCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACTGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTG----TTAATAATGGACTTTGACACGTTAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604413 511 + 50890351 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCGCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCATTCATTCTCCA-TGAA---GTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCACCCCCACTCCTCAGGGATAATGAGTTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGTTTTCACAAGTTAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 9511 514 + 138250 AGGAAAGGTGAGCCATGCTCTGTG---CCT---------------------------CTTGGAACTTTGAAACAAGTCTCCTTGACACAAAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAGTAGATGACTTTACTGATGAACTCGATACGCTGCTGACTGAGATAGAAGACAGCAACCCGCAGCTGACTATTGATACCGAGAGTCAAGAGCCCTGGAAGAAAAGGCCTTCTTCTCGCTACTTCACCGTCTGAATCCCCCCAGAGTCCTTCATTCTCAG-GGAAGACAAGCATTTCCCAGGTGTTGGTGAACTGCCTGCGACTC--CCCCCACCCTGCCCCCTCTCCTCGGGGA-AAGGAGCTGGTTGCTGGGCCAGGTGT---TTTAGCCGCGGTTCTGCCTCTGGTTCACGTAGAACCTGCATACGTC-----CTTGACCTTGTTACGTATGAAACGTCTGTATCACGGGTGTGTGGAGGGAAATAAAGGTGAGA--GCATTCGCAGATGAAGCTGTTACATAGTAATGGGCTGTGACCAGTTAGAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064372 521 - 122678785 AGTAAATATTGCCCCTGCC--------CCTGCTCTAAAGTATGAGAC-TTGCAGGCACTTGGGCATTTGGAATGAATCTCCTTGAAGCAACAAGAAACCTTCCTTTGTCCCATTGTAACTCCAGGTTGAAGATAGATGAATCTGATCCTCGAATCCAGAAGCTGCTAAAAGAAATCCAAGAATATGACCCACAACTGACCATCGAGAGTGATGACCAAGATCCAACCAATAACCGGCCTTCTTCACATGACTTCATTTTCTGAAT-CCCCTGGACTTATTCCTTCCCAAGTAAAATCCAGGATCATCAACATGATGTTGAACTTCCTCTGAGCC--------------------CTCTCAGTGAT-----GTTATGTGCTGGGCCAGATGTTACTGTATCCCTGGTTGTGCCTTCAGCTTCTATGAAACATGCACAGGTGGTTTACTTACCCCTATTATGGACAGAATGCCTATATCTTGAGTCTATCAAGAGCAATAAAGGTGTGAATGCATTCATGAAGGAGATTCT---TTATTAATGGATTCTGACCAAACATAG i canFam3.chr1 C 0 C 0 a score=17443.000000 s hg38.chr19_GL949748v2_alt 981163 6 + 1064304 --AAAAGA- s panTro4.chr19 59915071 6 + 63644993 --AAAAGA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845795 6 + 60714840 --AAAAGA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355483 6 - 106955855 --AGAAGA- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650475 6 + 64156825 --aaaaGA- i rheMac3.chr19 I 305 C 0 s macFas5.chr19 55791200 6 + 59248254 --AAAAGA- i macFas5.chr19 C 0 I 317 s papAnu2.chr19 47897682 6 + 51301725 --AAAAga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604924 6 + 50890351 --AAAAGA- i chlSab2.chr6 C 0 I 304 s calJac3.chr22_GL285922_random 10025 6 + 138250 --AAAAGA- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064893 9 - 122678785 ACAGAAAAA i canFam3.chr1 C 0 C 0 a score=7153.000000 s hg38.chr19_GL949748v2_alt 981169 3 + 1064304 TAT s panTro4.chr19 59915077 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845801 3 + 60714840 TAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355489 3 - 106955855 TGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650481 3 + 64156825 TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55791523 3 + 59248254 TAT i macFas5.chr19 I 317 C 0 s papAnu2.chr19 47897688 3 + 51301725 tat i papAnu2.chr19 C 0 I 585 s calJac3.chr22_GL285922_random 10031 3 + 138250 TAC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064902 3 - 122678785 TAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47604930 304 + 50890351 I a score=210578.000000 s hg38.chr19_GL949748v2_alt 981172 96 + 1064304 CTTA-CTGGGTAGAACCT----------GGGGGGTGGGGGAAG-TGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC s panTro4.chr19 59915080 96 + 63644993 CTTA-CTGGGTAGAACCT----------GGGGGGTGGGGGAAG-TGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845804 96 + 60714840 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAA-TGACAGTGTTTAATTGCATTCATTTCTATTCCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355492 95 - 106955855 CTCA-TTGGGGAGAACCT-----------GGGGCTGGGGGAAG-TGACCATGTTTAATTGCGTTGATTTCTATTGCCTTGTCAATCTTTGTCTTGCTG---TGGTAttttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650484 100 + 64156825 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAGTTGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCTTGGTATTTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55791526 100 + 59248254 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAGTTGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCTTGGTAtttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898276 100 + 51301725 cTTA-CTGGGGAGAacct----------ggggggtgggggaagttgACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCctggtatttcc i papAnu2.chr19 I 585 C 0 s calJac3.chr22_GL285922_random 10034 89 + 138250 CTTA-CTGGGGAGAACTT-----------GGGGGTGGGGGAGG--GACTGTGTTTAGTTGCATTGATTTCTGTCGCTTTGCCAGTCTTTGCCT--------TCGTAtttcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064905 105 - 122678785 TTTATTTGGGGAGAACCTAACACAGAAGGAAAAACGGGGACAG--AAATGTTTGTGATCTCCTTGGTCTGT-TCACCTTGCCAGTCACTGCCCAGTTC---TGGCATTCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47604930 304 + 50890351 I a score=2092.000000 s hg38.chr19_GL949748v2_alt 981268 20 + 1064304 tttcttttttcttttctttt s panTro4.chr19 59915176 12 + 63644993 tttcttttttc--------t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845900 11 + 60714840 tttcttttttc--------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355587 20 - 106955855 tttcttttatctttcttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650584 20 + 64156825 Tttttttttttttttttttt i rheMac3.chr19 C 0 I 166 s macFas5.chr19 55791626 6 + 59248254 tttttt-------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898376 5 + 51301725 ttttt--------------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10123 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=53952.000000 s hg38.chr19_GL949748v2_alt 981288 45 + 1064304 tttttttttttttttttagac---tgagtttcactctgttgcccacgc s panTro4.chr19 59915188 45 + 63644993 ttctttcttttttttttagac---tgagtttcactctgttgcccacgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845911 42 + 60714840 -tttttcttttttttttagac-----agtttcactctgttgcccatgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355607 43 - 106955855 tttttttttttttttATAAAAGAATGAGTTTCATTCTGTTGCC----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55791632 46 + 59248254 ttttttctttttttttaagat--ttgaatttcactctgttgcccatgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898381 46 + 51301725 ttttttttttttttttaagat--ttgaatttcactctgttgcccatgc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 10123 45 + 138250 tttttctttctttcttgagat---ggagctgcactctgttgcccaggc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60650604 166 + 64156825 I a score=137868.000000 s hg38.chr19_GL949748v2_alt 981333 139 + 1064304 tggagtacactggcacgatctcagcttactacaacctggcaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaagcatcccccaccacacccggctaaatttttttgt---atttttaatagagat s panTro4.chr19 59915233 139 + 63644993 tggagtacactggcacgatttcagcttactacaacctcccaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaagcatcccccaccacacccggctaaatttttttgt---atttttaatagagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845953 139 + 60714840 tggagtacagtggcacgatctcagcttactacaacctctcaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaggcatccctcaccacacccagctaaatttttttgt---atttttagtagagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355650 94 - 106955855 ---------------------------------------------caagcgattctcctgtttcagcctcatgagtagctgcgattacaggcatcccccaccacacccggctaaatttttttct---atttttagtagagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55791678 139 + 59248254 tggagtgcagtggcacgatctcagctcattacaacctcccaggttcaagcgatt---ctgtctcagcctcccgagtagctgggattacaggcattccccaccacacccagctaaattttttttttaaattcttagtacagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898427 139 + 51301725 tggagtgcagtggcacgatctcagctcactacaacctcccaggttcaagtgatt---ctgtcttagcctcccgagtagctgggattacaggcattccccaccacacccagctaatttttttttttatattcttagtacagat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60650604 166 + 64156825 I a score=374869.000000 s hg38.chr19_GL949748v2_alt 981472 242 + 1064304 gaggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccagagtgctgggattacaggcatgagccactgtacccggctttttttttttt--ctttttctt--tttcctcaagcatgag-----------tgttgctc---tgttgcccaggctggaatacagcagcatgatgatagctcactgcagcctcaagctcccaggttcaagcgatcctccagcctcagcct s panTro4.chr19 59915372 233 + 63644993 gaggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccagagtgctgggattacaggcatgagccactgtacccggctttttttttt-----------tt--tttcctcaagcacgag-----------tgttgctc---tgttgcccaggctggaatacagcagcatgatgatagctcactgcagcctcaagctcccaggttcaagcgatcctccagcctcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846092 243 + 60714840 gaggtttcaccatgttggccagtctggtcttaaactcctgacctcaagtgatccgtccacctcagcctcccagaatgctgggattaca-gcgtgagccactgcacccggctttttttttttttcctttttctt--tttcctcaagcatgag-----------tgttgctc---tgttgccctggctggaatacagcagcgtgatgatagctcgctgcagcctcaagctcccaggttcaagcgatcctccagcctcaacct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355744 243 - 106955855 gaggtttcaccatgtcggccaggctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccagaatgctgggattacaggcacgagccactgcacccggcttttttttt------------tt--tcccctcaagcatgagtgttgttgctctgttgctc---tgttgcccaggctggaatccagcagcatggttatagctcactgcagcctcaagcacccaggttccagcgatcctccagcctcaacct i nomLeu3.chr10 C 0 I 837 s rheMac3.chr19 60650770 235 + 64156825 gaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccagcctttttttttttt--------tt--cctcctcaagagtgag-----------tgttgctctgttgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcaagcttgcaggttcaagtgatcctccagcctcaacct i rheMac3.chr19 I 166 C 0 s macFas5.chr19 55791817 235 + 59248254 gaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccagcctttttttttttt--------tt--tctcctcaagagtgag-----------tgttgctctgttgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcgagctcgtaggttcaagtgatcctccagcctcaacct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898566 234 + 51301725 gaggtttcaccatgttgaccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccggcccttttttttttc--------ttccccccctCAAGAgtgag-----------tgttgctc---tgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcaagctcgcaggttcaagtgatgctccagcctcaacct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=236535.000000 s hg38.chr19_GL949748v2_alt 981714 196 + 1064304 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga-----------ttttttttgaagacagggtctcactatgttgcccaggctgatctcaaactcccaggcgcaagtaatattcctgcctcagcctcccaaagtgctagga-ttacaggtgtgaaccactgtgcctagccTGTCTTGTTACTTGT s panTro4.chr19 59915605 195 + 63644993 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga------------tttttttgaagacagggtctcactatgttgcccaggctgatctcaaactcccaggcgcaagtaatattcctgcctcagcctcccaaagtgctagga-ttacaggtgtgaaccactgtgcctagccTGTCTTGTTACTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846335 195 + 60714840 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga------------tttttttgaagacagggtctcactatgtcgcccaggctgatctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaggtgtgagccaGTGTGTCTAGTCTGTCTTGTTACTTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60651005 207 + 64156825 cctcagtacctgtgactacagatgcacgccaccaaaccaggccagttcttggggttttttttttttcttttttttttgaacaggttctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaagtgtgagccactgtgcccagccTGCCTTGTTATTTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792052 201 + 59248254 cctcagtagctgtgactacagatgcacgccaccaaaccaggccagttcttggggtttttt-------ttttttttcaagacagggtctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatactcctgcctcagcctcccaaagtgctgggatttacaagtgtgagccactgtgcccagccTGCCTTGTTATTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898800 199 + 51301725 cctcagtagctgtgactacagatgcacgccaccaaaCCAGGCCAgttcttggggttttt--------ttttttttgaagacagggtctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaagtgtgagccactgtgcccagcctgccttGTTATTTCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103355987 837 - 106955855 I e chlSab2.chr6 47604930 304 + 50890351 I a score=185509.000000 s hg38.chr19_GL949748v2_alt 981910 125 + 1064304 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-TCTACAATA-----------TTTTAGGTGCTTCGGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT s panTro4.chr19 59915800 125 + 63644993 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-TCTACAATA-----------TTTTAGGTGCTTCGGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846530 125 + 60714840 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-CCTACAGTA-----------TTTTAGGTGCTTGAGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60651212 124 + 64156825 TGACCTGCATGGATCACTGCCTGTTGAGTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATCCAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACAACCATGTCATTGCTCTGA-TTTGCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792253 124 + 59248254 TGACCTGCATGGATCACTGCCTGTTGAGTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATCCAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACGACCATGTCATTGCTCTGA-TTTGCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898999 124 + 51301725 TGACCTGCATGGATCACTGCCTGTTGACTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATACAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACGACCATGTCATTGCtctga-tttgctttt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20065010 127 - 122678785 TGATCTGTGTGGGTAGCTGCCTGATGG----TCTTCTTCAGAGTATTTCTCCTACCAATCCTACAACAGTTTGTAGCATTCTTAAGTGCTTCAGTGAAGCCCATATATGA-----TCATTTCTTTGA-TCAACTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103355987 837 - 106955855 I e chlSab2.chr6 47604930 304 + 50890351 I a score=24787.000000 s hg38.chr19_GL949748v2_alt 982035 15 + 1064304 TAAAAATTCTAACTT s panTro4.chr19 59915925 15 + 63644993 TAAAAATTCTAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846655 15 + 60714840 TAAAAATTCTAACTT i ponAbe2.chr19 C 0 T 32152 s nomLeu3.chr10 103356824 9 - 106955855 taaaaatac------ i nomLeu3.chr10 I 837 C 0 s rheMac3.chr19 60651336 15 + 64156825 TAAAAATTCCAACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792377 15 + 59248254 TAAAAATTCCAACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899123 15 + 51301725 taaaaattccaactt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20065137 15 - 122678785 TAGTAATTCCAACCT i canFam3.chr1 C 0 I 1307 e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=47356.000000 s hg38.chr19_GL949748v2_alt 982050 51 + 1064304 AAAATAGAATCT------Cggccaggcacggtggctcacacctgtaatcccagc-act s panTro4.chr19 59915940 51 + 63644993 AAAATAGAATCT------Cggccaggcacggtggctcacacctgtaatcccagc-act i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356833 50 - 106955855 aaaaaaaaa--t------tagctgggcgtggtggcgggcgcctgtagtcccagctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60651351 57 + 64156825 AAAATAGAATCTTTTCTATTGCCAGGCACGGTGGCTTACATCTGTAATCGCAGC-act i rheMac3.chr19 C 0 I 864 s macFas5.chr19 55792392 57 + 59248254 AAAATAGAATCTTTTCTATTGCCAGGCACGGTGGCTTACATCTGTAATCACAGC-act i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899138 57 + 51301725 AAAATAGAATCTTTTCtattgccaggcacggtggcttacatgtgtaatcgcagc-act i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=8146.000000 s hg38.chr19_GL949748v2_alt 982101 16 + 1064304 tcgggaggctgaggtg s panTro4.chr19 59915991 16 + 63644993 tcgggaggctgaggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356883 16 - 106955855 tggagaggctgaggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55792449 14 + 59248254 --cctaagctcaggtg i macFas5.chr19 C 0 I 65 s papAnu2.chr19 47899195 16 + 51301725 ttgggaggctgaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=217037.000000 s hg38.chr19_GL949748v2_alt 982117 502 + 1064304 ggtggat--cacgaagtcaggagttggaga------------------------------ccaacctggccaacgtggtgaaaccccgtctctactaaaaatataaaaaattagccaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggatgttgcactgtgctgaagactgcactactgcattccagcttgggcaacagagtgactccttctcc-----aaaaaaaaacaaaaTCTCATGGTATGCATAGTTTTTCACTATAGAGTCTCCATTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTACGctgtaaaaccacaaacaaaacgaactgtactataaagacaacactagttggcaaagttgcttctcatggggagac-------tt--tgttgctgtctgtgtttactggatgagcaaacaaatggacggtAAGGGGGAAAAAGAACAGTACAAATTTTTATTAAACACT-----AATCATG s panTro4.chr19 59916007 507 + 63644993 ggtggat--cacgaagtcaggagttggaga------------------------------ccaacctggccaacgtggtgaaaccccgtctctactaaaaatataaaaaattagccaggcatggtggtacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggatgttgcactgtgctgaagactgcactactgcattccagcttgggcaacagagtgactccttctccaaaaaaaaaaaaaaaaaaaTCTCATGGTATGCATAGTTTTTCACTATAGAGTCTCCAGTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTACGctgtaaaaccacaaacaaaacgaactgtactataaagacaacactagttggcaaagttgcttctcatggggagac-------tt--tgttgctgtctgtgtttactggatgagcaaacaaatggacggtAAGGGGGAAAAAGAACAGTACAAATTTTTATTAAACACT-----AATCGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356899 533 - 106955855 ggagaatggcgtgaacccgggaggcagagcttgcagtgagcgagattgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaatatataaaaaattagacaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggaggttgcactgtgctgaagactgcattactgcattccagcttgggcaacagagtgactccttctccaaaaaaaaaaaaaaaaaaaTCTCATGGTATGCATAGTTTTTCACTACAGAGTCTCCAGTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTATGctgtaaaaccacaaacaaaaggaactgtactataaagacgacactagttggcaaagttgcttctcatggggAGAC-----------TGTTG----CTGTGTTTACTGGATGAGCAAACAAAT----GGTAAGGGGGAAAAATAACAGTACAAATTTTTATT-AATACTAATAAAATCATG i nomLeu3.chr10 C 0 I 2 s papAnu2.chr19 47899211 492 + 51301725 ggcggat--cacaaggtcgggagttcgaga------------------------------ccagactggccaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccaggtgtggtggcacgtgcctgtaatctcagctacttgggaggctgaggcaggagaattgcttaaacccagaaggcggaggttgcattgagttgAAGACtgcgctattgcactctagcctgggcaac--agcaactctgtctca-----aaaaaaaacaaaaa---catggtatGCCTAGTTTTTCTCTATAGAGTCTCCAGGATTTCCTTGTGATACAGAATTCCAAGTTCAACAAAGCAACAGTGCAAGCTCTACACTGTAAAACCACAAACAAAAGGAACT--------------ACTCAAGTTGGCAAAGTTGCTTCTCATGGGGAGACAATAACTTTAACATTGCTGTCTGTGTTTACTGGATGAGCAAACAAATGGATGGTAAGGGGGAAAAATAACAGTACAAGTTTTTATTAAACact-----aataaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e macFas5.chr19 55792463 65 + 59248254 I e rheMac3.chr19 60651408 864 + 64156825 I a score=171291.000000 s hg38.chr19_GL949748v2_alt 982619 271 + 1064304 tttttttttgtttgttttgagacagtttc-ttct-tgttgcccaggctggagtgcaatggcacgattttggctcactgcaacctccgcctccccgggttcaagcgattctcttgcctcgacctactgagtagctgggattataggcatgtgccaccaagcctggctaa-ttttgaatttttagcagagacggggtttttccatgttggtcaggctggtctcgaactcccgacctcaggtgatccaccagccttggtctcccaaagtgctgggat s panTro4.chr19 59916514 267 + 63644993 -ttttttttgtttgttttgagacagtttc-ctct-tgttgcccaggctggagtgcaatgacacgattttggctcactgcaacctccgcctccccgggttcaagcgattctcttgcctcgacctactgagtagctgggattacaggcatgtgccaccaagcctggctaa-ttttg---tattagcagagacggggtttttccatgttggtcaggctggtctcgaactcccgacctcaggtgatccaccggccttggtctcccaaagtgctgggat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103357434 271 - 106955855 tttttgtttgttt-ttttgagacaggttcactct-tgttgcccatgctggagtgcaatggaactattttggctcattgcaacctccacctccccaggttcaagcgattctcctgcctcaacctcccaagtacctggtattatatgcatatgccaccccgcctacctaa-ttttgtatttttagcaaaaacggggtttttccatgttggtcaggctggtctccaactcccgaactcaagtgatccaccggccttggtctcccatagtgctgggat i nomLeu3.chr10 I 2 M 100 s macFas5.chr19 55792528 273 + 59248254 ttctttttttttttctttgtggcagaatcttgctatgtcgcccaggctggagtgcaatggcacaatctcagctcattgcagcctccgcctcctc-atttcaagcaattctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaatttttgtattttttgtagagacagggtttcaccaggttgcccagactggtctcgaactactgagttcaggtgatctgcccagcttggcctccccaagtggtgggat i macFas5.chr19 I 65 C 0 s papAnu2.chr19 47899703 269 + 51301725 --taacttttttttttttgagacagtttcactct-tgttgtccaggttggagtgcaatggcacgattttagcacaccgcaacctccacctcccctggttcaagcgattctcctgcctcggcctcccgagtagctgggattacaggtgc-cgccaccgcacctggctaa-ttttgtatttttagtagagacagggttttaccatgttgatcaggctggtctcgaagtcctaacctcaggtgatccacctgccttggtctcccaaagtgctgggat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=42046.000000 s hg38.chr19_GL949748v2_alt 982890 127 + 1064304 tacaggtataagtcaccgcacctggcAACAtttttttcttttttttttttttttttttttttttttttGGTGGcagaatcttgctctttcacccaggctggaatgcaatggcacgatctcgggtcac s panTro4.chr19 59916781 120 + 63644993 tacagctatgagtcaccgcacctggcAACATttttttc-------cttttctttttttttttttttctggtggcagaatcttgctctttcacccaggctggaatgcaatggcacgatctcggctcac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55792801 119 + 59248254 tgtatgtctgagccaccacacctggccAAAAGTAGtt--------ttaattttttttttttttttttttgagacggagtcttgctctgttgcccaggctggagtgcagtggcacgatctcagctcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899972 107 + 51301725 tacaggcgtaagtcaccgcacccagcaaca--------------------tttctttttttttttctttgtggcagaatcttgctctgttgcccaggctggagtgcaatggcacgatctcagctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103357705 100 - 106955855 M e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=165485.000000 s hg38.chr19_GL949748v2_alt 983017 236 + 1064304 tgcagcctccacctccccagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgcatttttggtagagatagggttttgccacgttgtccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaaatgctgggattataggcatgagccaccacacctggtcAAAAGTAGTTTT s panTro4.chr19 59916901 236 + 63644993 tgcagcctccacctccccagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgtatttttggtagagatagggttttgccacgttgtccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaaatgctgggattataggcatgagccaccacacctggTAAAAAGTAGtttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103357805 236 - 106955855 tgcagcctctacctcccaagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgtatttttggtaaagatagggtttcgccacgttgcccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaagtgctgggattataggcatgagccaccacacctggtcAAAAGTAGTTTT i nomLeu3.chr10 M 100 C 0 s macFas5.chr19 55792920 222 + 59248254 tgcaagctccgcctcctgggccgacgccattctcctgcctcagcctcccgagtagctgggaccacaggtgcccgcctccgcacccggctaattttttgtatttttagtagagacgggatttcactgtgttagccaggatggtctcgatctcctgacctt--gtgatccacccggctcggcctcccagactgctgggattacaggcgtgagccaccgcacccggc------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900079 236 + 51301725 tgtagcctccacctccccatatcaagcaattctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcagccaggtaa-tttttgtattttttgtagagacagggtttcaccatgttgcccagactggtcttgaactactgagttcaggtgatctgcccagcttggcctctcCAAGTGGTGGGATTGTAtgtctgagccaccacacctggccaaaagtagtttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=209469.000000 s hg38.chr19_GL949748v2_alt 983253 166 + 1064304 AATATTTAAATTTAAAACTAAAAAAGTTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCTATTGGTTTATTCCCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACAGTGTGGGCTTCTGAGGT s panTro4.chr19 59917137 166 + 63644993 aatatttaaatttaaaactaaaaaaGTTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCTATTGGTTTATTCCCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACAGTGTGGGCTTCTGAGGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103358041 166 - 106955855 AATATTTAAATTTAAAACTAAAAAAATTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTCTCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACTACTCCATCACTTTCCAGTTCCACTGCATACAGTTTGGGCTTCTGAGGT i nomLeu3.chr10 C 0 I 16 s rheMac3.chr19 60652272 167 + 64156825 AATATTTAAATTGAAAACTAAAAAAATTAATCTCACTCTTACACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTTTTACCGACTAGATGCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGGT i rheMac3.chr19 I 864 C 0 s macFas5.chr19 55793142 167 + 59248254 AATATTTAAATTGAAAACTAAAAAAATTAATCTCACTCTTACACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTTTTACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900315 167 + 51301725 aatagttaaatttaaaactaaaaaaattaatcttactCTTACACTTTCATTTCTTCAACAGGGGCCATTGGTTTATTTTTACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGTT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=129088.000000 s hg38.chr19_GL949748v2_alt 983419 92 + 1064304 TTCCTGGTTCAAGGTGTCCTTGTTCAATGCGGCATGG-GTCATTCCCTGAGCAtttt-----------------------tttttttttttgacagtctcgctccattgcccggtt s panTro4.chr19 59917303 99 + 63644993 TTCCTGGTTCAAGGTGTCCTTGTTCAATGTGGCATGG-GTCATTCCCTGAGCAtttt----------------gtttttgtttttttttttgacagtctcgctccattgcccggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814518 100 + 60714840 TTCCTGGTTCAAGGTCTCCTTGTTCAATGGGGCACGGTGACATTCCCTGAGCAtttt----------------ttttttttttttttttttgacagtctcactccgttgcccggtt i ponAbe2.chr19 T 32152 C 0 s nomLeu3.chr10 103358223 95 - 106955855 TTCCTGGTTCAACGTCTCCTTGTTCAATGGGGCATGG-GTCATTCCCTGAGCAtttt--------------------ttttttttttttttgacagtctcgctccattgcctggtt i nomLeu3.chr10 I 16 C 0 s rheMac3.chr19 60652439 111 + 64156825 TTCCTGTTTCAAGGTCTCCTTACCCAACACAGCATAG-GTCATTCCCTGAGCATCCCCCCA----CTCttttttttttttttttttttttggacagtctcgctccattccctggtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793309 115 + 59248254 TTCCTGTTTCAAGGTCTCCTTATCCAACACAGCATAG-GTCATTCCCTGAGCATCCCCCCCGCCttttttttttttttttttttttttttGGACagtctcgctccattccctggtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900482 95 + 51301725 TTCCTGTTTCAAGGTCTCCTTATCCAACCCAGCACAG-GTCATTCCCTGagccccctcccc--------------------tttttttttggacagtctcGCTCCATTCcctggtc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=121095.000000 s hg38.chr19_GL949748v2_alt 983511 56 + 1064304 tggagtgcagtggtgtgacctcggcttactgcagcctctgcctcccaagttcaagc s panTro4.chr19 59917402 56 + 63644993 tggagtgcagtggtgtgacctcggcttattgcagcctctgcctccgaagttcaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814618 56 + 60714840 tggagtgcagtggtgtgatctcagcttactgcagcctctgcctcccaagttcaagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358318 56 - 106955855 tggagtgcagtggtgtgatctcggcttcctgcagcctcttcctcccaagttcaagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60652550 56 + 64156825 tggagtgcagtggcgtgatctcggctcactgtaacctccgcctcccaagttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793424 56 + 59248254 tgaagtgcagtggcgtgatctcggctcactgcaacctccgcctcccaagttcaagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900577 56 + 51301725 tggagtgcagtggcgtgatctcggctcactgcaacctccgcctcccaagttcaagc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 10168 50 + 138250 tggagcgcagtggtgtgatttcaactcactgcaacctccgcctcccaggt------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e chlSab2.chr6 47604930 304 + 50890351 I a score=1040625.000000 s hg38.chr19_GL949748v2_alt 983567 442 + 1064304 aattctgcct--caggctcccggataatttttgcatttttagtagagaca-gggtttcaccgcgctggccaggctggtctcgaacccctaacctcaagcgatctgcctgcctcggtctcccaaagtgctgggattacagacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAGGTTGGTAAAAAGAGAGGCACAAAGTTTAAAAAGGACATTGCGTGAAGAAACTAaaggtttctccttctccacactattgaca-tttgggatcggatcactactcgttgggaaac---gtcctgtacatttccagggtgttcggcaccatccctagcctctaccccctagataccagctcacatcctcacagttaacagtgatcaaaaatgtctctgggcagtagaaaatatttcctgaaatgc s panTro4.chr19 59917458 441 + 63644993 aattctgcct--caggctcccggataatttttgcatttttagtagagaca-gggtttcaccgtgctggccaggctggtctcgaacccctaacctcaagcgatctgcctgcctcggtctcccaaagtgctgggattacagacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGAGAAGGTTGGT-AAAAGAGAGGCACAAAGTTTAAAAAGGACATTGCGTGAAGAAACTAaaggtttctccttctccacactattgaca-tttgggatcggatcactactcgttgggaaac---gtcctgtacatttccagggtgttcggcaccatccctagcctctaccccctagataccagctcacatcctcacagttaacagtgatcaaaaatgtctctgggcagtggaaaatatttcctgaaatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814674 439 + 60714840 aattctgcct--cagccttccggataatttttgcatttttagtagagaca-gggtttcaccgtgttggccaggctggtcttgaacccctaacctcaagcgatcctcctgcctcggtctcccaaagtgctgggattacacacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAAGTTGGT-AAAAGAGAGGCACAAAGTTTGAAAAGGACGTTGCATGAAGAAACGAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttgggaaacatggtcctgtacatttacagggtgtttggcaccatccctagcctctaccccctagataccag----catcctcacagtt-atgatgaccaaaaatgtctctgggcattagaatatatttcctgaaatgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358374 439 - 106955855 aattctgcct--caggctcctggataatttttgcatttttagtagagaca-aggtttcaccgtgttggccaggctggtcttgaacccctaacctcaagcgatccgcctgcctcagtctcccaaaatgctgggattacagacataagctaccgtgcccgaccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAAGGTGGT-AAAAGAGAGGCATAAAGTTTAAAAAGGACATTGCATGAAGAAACTAaaggtttctcattctccacactattgaca-tttggggtgagatcactgcttggtgggaagcatggtcctgtacatttacacggcgcctggcaccatccccagcctccaccccctggatgccag----catccccccagtg-atgatgatcaaaaacgtctctgggctgtagaaaatacttcctgaaatgc i nomLeu3.chr10 C 0 I 115 s rheMac3.chr19 60652606 421 + 64156825 aattctgccccacacactcccggcaaatttttacatttttagt--agaca-ggatttcaccatgttggccaggctggtcttgaa---ctgacctcaagtgatccacctgcctcagcctcccaaagtgctggaattacagaaataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGCGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagtatgtttggcagcatccctagcctctacccactagataccag----catcct--cagtt-atgacgatcaaaaatgtctctgggcattagaaaatatttgctgaaatgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793480 423 + 59248254 aattctgccccacacactcccggcaaatttttacatttttagt--agaca-ggatttcaccatgttggccaggctggtcttgaa---ctgacctcaagtgatccacctgcctcagcctcccaaagtgctggaattacagaaataagctacagtgcccggccTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGCGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagtatgtttggcagcatccctagcctctacccactagataccag----catcctcacagtt-atgacgatcaaaaatgtctctgggcattagaaaatatttgctgaaatgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900633 425 + 51301725 aattctgccc--cagactcctggcaaatttttgcatttttagt--agacaggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacagaaataaGCTACCGGGCCCGGCCTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGGAAAGTTGAC-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAAAGGTTTCTCATTCTccacactattgaca-tttggggtcAGATCACTACTTGTTAGGAAACATGGTCCTCTACATTTACAGTATGTTTGGCAGCATCCctagcctctacccactagataccag----CATCCTCACAGTC-ACGATGATCAAAAATGTCTCTggacattagaaaatatttactgaaatgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605234 423 + 50890351 aaTTCTGCCC--CAGactcccggcaaatttttgcatttttagt--agacaggggtttcaccatgttggccaggctggtcttgaactcctgacgtcaagtgatccacctgcctcagtctccgaaagtgctgggattacagaaataaactactgtgcccagGCTCCAGAGCATCTTTATTCTCAGGTTCACCGGGAGGAAGGGGGGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctccttctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagggtgtttggcagcatccctagcctctacccactagataccag----catcctcacagtt-acgacgatcaaaaatg--tctgggcattagaaaatattcactgaaaggc i chlSab2.chr6 I 304 C 0 s calJac3.chr22_GL285922_random 10218 346 + 138250 ---------------------------------------------------------------------------------------------ttaagcaatccacctgcctcagcctccccaagtgctggaatgacggacatgagctatcgcgcctggcCTCCAGAGCATCTTTATTCTCAGGTTCGGCAGGAGGAAGGGGGAAAGTTGGT-GAA--AGAGGCATGCAGTTTAAAAGGGACATTGCGTGAAGAAACc-aaggtttcttattgtccacactgttaacgttttgaggctagatcactgcttgctggttaacatggtcctgtacgttgataggg-gtttggcaccatccctagcctccactgaccagaggccag----catcctcacagct-atgatgaccaaaagtgtctctgagaattagaaaatacttcctgaaatgc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I a score=142638.000000 s hg38.chr19_GL949748v2_alt 984009 45 + 1064304 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT s panTro4.chr19 59917899 45 + 63644993 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815113 45 + 60714840 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358928 45 - 106955855 GAAGTTTTCTTAGGTTGAGAGCCATTGTAATCTAGCCCCATCTTT i nomLeu3.chr10 I 115 C 0 s rheMac3.chr19 60653027 45 + 64156825 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793903 45 + 59248254 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901058 45 + 51301725 AACATTTTCTTAGGTTGAGAACCATTGTAATCTAGCCCCATCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605657 45 + 50890351 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 10564 45 + 138250 aaaatttccttaggttgtgaaccattgTGATCTAGCCCCATCTTT i calJac3.chr22_GL285922_random C 0 I 288 e canFam3.chr1 20065152 1307 - 122678785 I a score=800544.000000 s hg38.chr19_GL949748v2_alt 984054 349 + 1064304 AGAGAAG-AAATTGAGTAACGGATCTACATCCATTGAGGAAC--TATCGACACCCCAGGGGCCCATGAAATGTAAACTCGCACTCACAATTAACCATCTTTCTCCAACGTGTGTATTTCATGTAGCCACACTCTCAGATGCCCACCCCCATGACCTACAAGTCCTAAACAGGGAAACCTGTGGCACATGGGTTC----ATGTGTGTCTGAATCTATA--CGTTCAGAGATGAACAAGTACTGCTCTCCCTA----------------TACCTGTGACCACTCGCCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCATTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC s panTro4.chr19 59917944 350 + 63644993 AGAGAAGAAAATTGAGTAACGGATCTACATCCATTGAGGAAC--TATGGACACCCCAGGGGCCCATGAAATGTAAACTCGCACTCACAATTAACCATCTTTCTCCAACGTGTGTATTTCATGTAGCCACACTCTCAGATGCCCACCCCCATTACCTACAAGTCCTAAACAGGGAAACCTGTGGCACATGGGTTC----ATGTGTGTCTGAATCTATA--CGTTCAGAGATGAACAAGTACTGCTCTCCCTA----------------TACCTGTGACCGCTCGCCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCATTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815158 364 + 60714840 AGAGAAG-AAATTGAGTAACGTATCTACATACATTTAGGAAC--TATTGACACCCTAGGGGCCCATAAAATGTAAACTTGTACTCATAATTAACCATCTTTCTCCAACGTGTGTATTTCATCTAGCCATACTCTCAGATGCCCACCCTCATGACCTA-AAGTCCTAAACAGTGAAACCTGTGGCACATGGGCTC----ATGTGTGTCTGAATCTATA--TGTTCAGAGATGAACAAGTACCGCTGTCCCTGTTTTCTTGCACCTCCTTACCTGTGACCACTCACCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCTTTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358973 362 - 106955855 AGAGAAG-AAATTGAGTAAC--ATCTACATCCATTTAGGAAC--TATTGACACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTCACCATCTTTCTCCAATGTGTGTGTTTCATCTAGCCATACTCTCAGATGCCTACCCTCATGACCGACAAGTCCTAAACAGTGAAACCTGTGGCACGTGGTTTC-----TGTGTGTCTGAATCTGTA--TGTTCAGAGATGAACAAGTACTGCTGTCCCTATTTTCTTGCACCTCCTTACCTGTGACCACTCGCCTCCGCCCATCACTGAATTCTGAAAGTGTGGCCTCAGGCTCACAGCAGCATTAGCGTCTGCTTGCTCTGGATCTTATCACACTGATGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653072 317 + 64156825 ACAGAAG-AAATTGAGTAATGTATCCACATCCATTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAATGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCC--GTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793948 317 + 59248254 ACAGAAG-AAATTGAGTAATGTATCCACATCCATTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCC--GTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901103 319 + 51301725 ACAGAAG-AAATTGAGTAATGTATCTACATCCGTTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCATTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCCCTGTTTCCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605702 313 + 50890351 CCAGAAG-AAATTGAGTAATGTATCTACATCCGTTTAGGAACGGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCGTAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCATGCTCTTAGATGCCTACCCTCACGACCTACAAGTAC------GTGAAATCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACCGCTGTCCCTGTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 10897 337 + 138250 aaggaag-aaaTTGAGTAATGTATGCACATTCGTTTAGGAACTGTATTGACACACCAGGGGTCCATAAAATGTAACCGTGCACTCATAATTGACCATCTTTCTCCAACGTGTGTATTTCATCTGGCC----------------GCCCTCATGACAGGTAAGTACTGAAAACTGAAA--TGGAGCACATGGG----------------TGAATCTGTAGGTGTTCAGAGGTGAACAAGTGCTGCTGTCT--TGTTTCTCACACCTCCTTACCTGTGACCGCCCACCTCTGCCCACCACTGAgttctgaaaatgtggcctcaggctcacagcagcattagcaCTTGCTTGCTCTCGATCTCCTCACATTGATGATC i calJac3.chr22_GL285922_random I 288 I 316 e canFam3.chr1 20065152 1307 - 122678785 I a score=218854.000000 s hg38.chr19_GL949748v2_alt 984403 80 + 1064304 AAGAACAAAGTATTCACTGGGTTCTCTGCTAAGGATAC-AAAAAAAACCATTCCACAATTCCACGGCCATGTTTGCACCCA s panTro4.chr19 59918294 80 + 63644993 AAGAACAACGTATTCACTGGGTTCTCTGCTAAGGATCC-AAAAAAAACCATTCCACAATTCCACGGCCATGTTTGCACCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815522 80 + 60714840 AAGAACAAAGTATTCACTGGGTTCCCTGCTAAGGATAC-AAAAAAAACCATTCCACAATTCCATGGCCATGTTTGTACCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359335 80 - 106955855 GAGAAGAAAGCATTCACTGGGTTCTCTGCTAAGGATAC-AAAAAAAACCCTTCCACAGTTCCATGGCCATGTTTGCACCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653389 79 + 64156825 AAGAACAAAG--TTCACTGGGTTCTCTGCTAAGGATACAAAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55794265 79 + 59248254 AAGAACAAAG--TTCACTGGGTTCTCTGCTAAGGATACAAAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901422 78 + 51301725 AAGAATGAAG--TTCACTGGGTTCTCTGCTaaggatac-aaaaaaaatcattccacAATTCCATGGCCATGTTTGCACCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606015 76 + 50890351 AAGAACGAAG--TTCACTGGGTTCT---CTAAGGATACAGAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11550 80 + 138250 aagaacaaaGTATTCACTGGGTTCTCTGATAAGGATAC-AAAAAAAATCATTCCACAGTCCCATGGCCGTGTTTGCACCCA i calJac3.chr22_GL285922_random I 316 C 0 e canFam3.chr1 20065152 1307 - 122678785 I a score=194044.000000 s hg38.chr19_GL949748v2_alt 984483 68 + 1064304 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTTCCTGGAGC--AAAAAA-------AAGAGC s panTro4.chr19 59918374 70 + 63644993 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTT-CTGGAGC--AAAAAA----AATAAGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815602 71 + 60714840 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTTCCTGGAGC--AAAAAA----AATAAGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359415 75 - 106955855 GGAACCACGAGGGCTGGGTTAGCCCAGATGATGGGCTCGGGA-AATGTTCCCGGAAC--AAAAAAAAACAATAAGAGC i nomLeu3.chr10 C 0 I 167 s rheMac3.chr19 60653468 63 + 64156825 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCTTGGAGC-------A-------AAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55794344 68 + 59248254 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCCTGGAGC--AAAAAA-------AAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901500 70 + 51301725 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCctggagcaaaaaaaa-------aagagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606091 70 + 50890351 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGTTTGGGA-AGTGTTCCTGGAGCAAAAAAAA-------AAGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11630 69 + 138250 GAAACCACAAGGGCTGCGTTAGCCCAGGTGGTGGGTTTGGGCTAATGTT-CTGGAGC--AAAAAA------GCAGAAC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786277 66 + 122678785 GGGATCACAGAGCCTGGCTCAGCCCAGATGGTGGGTTTGGGG-AGGGTCCCTGGAAG--GAAACA-------GAGG-- i canFam3.chr1 n 1307 C 0 a score=32493.000000 s hg38.chr19_GL949748v2_alt 984551 10 + 1064304 CAGAAGTCAT s panTro4.chr19 59918444 10 + 63644993 CAGAGGTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815673 10 + 60714840 CAGAGGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359657 10 - 106955855 CAGAGGTCAT i nomLeu3.chr10 I 167 C 0 s rheMac3.chr19 60653531 10 + 64156825 CAGAGGTCAT i rheMac3.chr19 C 0 I 113 s macFas5.chr19 55794412 10 + 59248254 CAGAGGTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901570 10 + 51301725 cagaggTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606161 10 + 50890351 CAGAGGTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11699 10 + 138250 CGGAGATCAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786343 9 + 122678785 -CTGGGTCAC i canFam3.chr1 C 0 C 0 a score=521908.000000 s hg38.chr19_GL949748v2_alt 984561 220 + 1064304 GAGAGCCTGACCCCCTCC----CCCAACGCG--------------------------------------CACACACACACACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTAAGCCGCGC---TTTTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CTCTCCTGT-----TCAAGATCCTGTGGCTCAGCTGCAGCTCTGGAAGAAAGACCCCGGTGAGGGTC-TTGCTTT s panTro4.chr19 59918454 255 + 63644993 GAGAGCCTGACCCCCTCC----CCCAACGCGGGCGCGCGcacacacacacacacacacacacacacacacacacacacacacCACTCTCTACCTCCAAGCCACATTTTCAGGCTT------------AAAGCTAAGGTCACTCCCATGAGCTAAGCCGTGC---TTCTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CTCTCCTGT-----TCAAAATCCTGTGGCTCAGCTGCAGCTCTGGAAGAAAGACCCCGGTGAGGGTC-TTTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815683 227 + 60714840 GAGAGCCTGATCCCTTCC----CCCAATGCG----------------------------------------CACACACACACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTTTTCAGGCTTCTCAAAGCTAAGGTCACTCCCATGAGCTAAGCCGCGC---TTCTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CCCTCCTGT-----TCAAGATCCTCTGCCTCAGCTGCAGCTCTGGAAGAAAGACCCCAGTGAGGGTC-TTTCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359667 240 - 106955855 GAGAGTCTGACCCCCTCC----CCCAATGCG------------------CGcacacacacacacacacacacacacacacCCCACTCGCTACCTCCAAGCCTCATTTTCAGGCTT---------CTTAAAGCCAAGGTCACTCCCATGAGCTAAGCCGCGC---TTCTCTCAGTCCTCAGCTCTTCCACCAGAATACGAAGACCT------------------CTCTGCTGT-----TGAAGATCCTCTGGCTCAGCTGCAGCTCTGGAGGAAAGACCCCGGTGACGGTC-TTTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653654 214 + 64156825 GAGAGCCTGATCCCCTCC----CTCAACACA--------------------------------------CACACACACACACCACT--TTACATCCAAGTCTCATTTTCAGGCTT---------TTCAAAGCTAAGATCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAACTCTTCCACGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCAGTGAGGGT-----CTTT i rheMac3.chr19 I 113 C 0 s macFas5.chr19 55794422 214 + 59248254 GAGAGCCTGATCCCCTCC----CTCAacaca--------------------------------------cacacacacacaccacT--TTACATCCAAGTCTCATTTTCAGGCTT---------TTCAAAGCTAAGGTCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAACTCTTCCACGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCAGTGAGGGT-----CTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901580 208 + 51301725 GAGAGCCTGATcccctc----------aaaa--------------------------------------cacacacacacaccact--ctaCATCCAAGTCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAGCTCTTCCACGAGAACAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCGGTGAGGGT-----CTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606171 208 + 50890351 GAGAGCCTGATCCCCTCC----CTCA----A--------------------------------------CACACACACACACCACT--CTACATCCAAGTCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTACGCCGGGC-----CTCTCAATTCTCAGCTCTTCCATGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCGGTGAGGGT-----CTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11709 217 + 138250 GAGAGCCTGACCCCCTCC----CACA----G--------------------------------------CACATACGCATACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCAATCCCATGAGTTAAGGTGCAC---GTTGCTCAATCCACAGCTGTTCCACAAGAATAGAAAGAACT------------------CTCTCCTGT-----TCAAGACCCTCTGGCACAGCCACAGCTCTGGCAGACAGACTTCGGTGAGGGTCATCCATTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786352 224 + 122678785 AAGGTCCTCTCCACCCTCAGTTCCCAACTCA--------------------------------------GCCCCAAACACCCAGAT--GTCCCCCC-----------TCTGTCAA---------CCCAGAGCT--GCTGATCTCCATCCCCCCTGCCTGGTGGGTATTCCCTGTCCCCAGT----------GAGGAGGTGGGACTGGGACCCCTGGGGACAGACTCACCTGCCTGCACTGAGTCCCTGGAGCCCACACTCAGCCCTGGAAGAGAGTCCCTATGAGAGGT--TTGCCCT i canFam3.chr1 C 0 n 0 a score=199254.000000 s hg38.chr19_GL949748v2_alt 984781 65 + 1064304 TCACAATCCCCAATCCCAGACCACATCCTGTG-CCCCAAAACAACTTCCATGGTAACCACATCCTT s panTro4.chr19 59918709 66 + 63644993 TCACAATCCCCAATCCCAGACCACATCCTGTGCCCCCAAAACAACTTCCATGGTAACCACATCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815910 65 + 60714840 TCACAATCCCCAATCCCAGACCACATCCTGTA-CCCCAAAACAACTTCCATGGTAACCACGTCCTT i ponAbe2.chr19 C 0 I 113 s nomLeu3.chr10 103359907 65 - 106955855 TCACACTCCCCAATCCCAGACCACATCCTGCG-CCCCAAAACAACTTCCATGGTAACCACATCCTT i nomLeu3.chr10 C 0 I 109 s rheMac3.chr19 60653868 65 + 64156825 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i rheMac3.chr19 C 0 I 295 s macFas5.chr19 55794636 65 + 59248254 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i macFas5.chr19 C 0 I 97 s papAnu2.chr19 47901788 65 + 51301725 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i papAnu2.chr19 C 0 I 97 s chlSab2.chr6 47606379 65 + 50890351 TCACAATCCCCAATCACAGATCACATCCTGTG-CCCGAAAACAACTTCCATGGTCACCACATCCTT i chlSab2.chr6 C 0 I 97 s calJac3.chr22_GL285922_random 11926 65 + 138250 TCACAATCCCCAATCCCAGACCACAGCCTGTG-CCCCAAAACAACTTCCATGGTAACCACATCCCT i calJac3.chr22_GL285922_random C 0 I 25 e canFam3.chr1 102786576 0 + 122678785 I a score=-2973.000000 s hg38.chr19_GL949748v2_alt 984846 5 + 1064304 CAGGA--------------------------------------------- s panTro4.chr19 59918775 5 + 63644993 CAGGA--------------------------------------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103360081 5 - 106955855 CAGGA--------------------------------------------- i nomLeu3.chr10 I 109 C 0 s calJac3.chr22_GL285922_random 12016 50 + 138250 CAGGCTTCTCGAGGCTTCCCCTACTCACCCAGACAGAGCAGTGTAGATCA i calJac3.chr22_GL285922_random I 25 C 0 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56815975 113 + 60714840 I e chlSab2.chr6 47606444 97 + 50890351 I e papAnu2.chr19 47901853 97 + 51301725 I e macFas5.chr19 55794701 97 + 59248254 I e rheMac3.chr19 60653933 295 + 64156825 I a score=10270.000000 s hg38.chr19_GL949748v2_alt 984851 14 + 1064304 AGTGAA-GTCAGGCA s panTro4.chr19 59918780 14 + 63644993 AGTGAA-GTCAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816088 14 + 60714840 AGTGAA-GTCAGGCA i ponAbe2.chr19 I 113 C 0 s nomLeu3.chr10 103360086 14 - 106955855 AGTGAA-GTCAGGCA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 12066 15 + 138250 AGTAAATGTCATGCA i calJac3.chr22_GL285922_random C 0 I 4 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47606444 97 + 50890351 I e papAnu2.chr19 47901853 97 + 51301725 I e macFas5.chr19 55794701 97 + 59248254 I e rheMac3.chr19 60653933 295 + 64156825 I a score=531889.000000 s hg38.chr19_GL949748v2_alt 984865 261 + 1064304 GGAAGTCAAGTCAGAAGAC--GGAATGggctgggcatggtggatcgcacctgtaatcccagcactttgggaggcagaggcaggtggatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaataccaaaagtagccaggcttggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttaaa--cccggaaggcggaggttgcaatgagccgagat s panTro4.chr19 59918794 263 + 63644993 GGAAGTCAAGTCAGAAGACAGGGAATGggctgggcatggtggatcgcacctgtaatcccagcactttgggaggcagaggcaggtggatcacatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagtagccaggcgtggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttaaa--cccagaaggcggaggttgcaatgagccgagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816102 261 + 60714840 GGAAGTAAAGTCAGAAGAC--GGAGTGggctgggcatggtggatcgcacctgtaatcccagcacttcgggaggcagaggcaggtggatcacataaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcagttaaa--cttggaaggcagaggttgcaatgagccgagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360100 263 - 106955855 GAAATTAAAGTCAGAAGACAGGGAGTGggctgggcgtggtggatcgcacctgtaatcccagcattttgggaggcagaggcaggtggatcacgtgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctaccaaaaatacaaaaactagccaggcgtggtggcgcatgcctgtaatcccagctactctggaggctgaggcaggaggattgcttaaa--cccggaaggtggaggttgcaacgaaccgagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55794798 254 + 59248254 GCAAGTAAAGTCGGAAGAC--GGGGTGggctgggcacggtgaatcgcacctgtaatcccagcacttcgggaggcggaggcgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatcagtcgggcgtggtggcgcatgcctgtagtcccagctactctggaggctgaggcaggagaatcgcttaaa--cccgggaggtggaggttgcagtgag------- i macFas5.chr19 I 97 C 0 s papAnu2.chr19 47901950 257 + 51301725 GCAAGTAAAGTCGGAAGACAGggagtgggctgggcacggtgaatcgcacctgtaatcccagcacttcgggaggtggaggcgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacataatcaaaccctgtctctactaaaaatacaaaaatcagccaggcatgg-gacacatgcctgtagtcccagctactctggaggctgaggcgggagaatcgcttaaaaccccggaaggtggaggttgcagtgag------- i papAnu2.chr19 I 97 C 0 s chlSab2.chr6 47606541 254 + 50890351 GCAAGTAAAGTCGGAAGAC--GGAGTGggctgggcatggtgaatcgcacctgtaatcccagcacttcgggaggtggaggtgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacataatcaaaccctgtctctactaaaaatacaaaaatcagccgggcgtagtgacacacgcctgtagtcccagctactctggaggctgaggcaggagaatcgcctaaa--ccccggaggtggaggttgcagtgag------- i chlSab2.chr6 I 97 C 0 s calJac3.chr22_GL285922_random 12085 234 + 138250 GCAAGTAAAGGCAG-------GAAGTG-----------------cacacctgtaatcccagcactttgggaggtggaggcgggtggatcacatgaggtcaagagtttgagaccagcctggtcaacattgtgaa--cccatctctactaaaaatac---atttagctgagcatggtagtgcatgtctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaa--cctaggagatggaggctgcagtgagatgagat i calJac3.chr22_GL285922_random I 4 I 858 e canFam3.chr1 102786576 0 + 122678785 I e rheMac3.chr19 60653933 295 + 64156825 I a score=130651.000000 s hg38.chr19_GL949748v2_alt 985126 83 + 1064304 cgcaccattgcactccagcccgggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtgatctcagctacttg s panTro4.chr19 59919057 82 + 63644993 cgcaccattgcactccagcct-ggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtgatctcagctacttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816363 82 + 60714840 cgcaccatcgcactccagcct-ggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtaatctcatctacttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360363 84 - 106955855 cgcaccattgcactccagcct-ggggacagaa----------------------------aaaaaaaaatgtagctgagcatggtagtgcacgtctgtaatctcagctacttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55795052 106 + 59248254 ----ccattgcactttagcctgggggacagaatgagactccgtctcaaaaaa---aaaagaaaaaaaaaTGtagctgagcatggtattgcacgtctgtaatctcggctacttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902207 109 + 51301725 ----ccattgcacttcagcctgggggacagaatgagactccatctcaaaaaaaataaagaaaaaaaaaatgtagctgagCATGGTAttgcacgtctgtaatctcagctacttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606795 109 + 50890351 ----ccattgcacttcagcctgggggacagaatgagactccatctcaaaaagaaaaagaaaaaaaaaaaTGtagctgagcatggtattgcacgtctgtaatctcagctacttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 12319 858 + 138250 I e rheMac3.chr19 60653933 295 + 64156825 I a score=1055079.000000 s hg38.chr19_GL949748v2_alt 985209 475 + 1064304 ggagtctgaggcaggagaatcacttgaacccaggcggtggaggttgcagtgagccaagattgtaatagtccaatgtgttcaccttgcccactgcctagacagagctgattcgtcaagaca-gggaatcgcaatagagaataattcatgcagagctggctctacgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagcg-------tttttaaggataacttggtgggtgggtgggaagccagtgagccaggagtgctgtttggtcagggatgaaatcgtgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaagtt-----aaacgctgatcttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatgactcct s panTro4.chr19 59919139 473 + 63644993 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagattgtaatcgtccaatgtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaataattcatgcagagctgtctctacgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagag-------tttttaaggataatttggtgggtgggtgggaagccagtgagccaggagtgctgtttggtcagggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaaatt-----aagcgctgatcttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatgactc-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816445 477 + 60714840 ggagtctgaggcaggagaatcgcttgaacccagaaggcggaggttgcagtgagccaagattgtaattgtccaaggtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaataattcatgcagagctggctctatgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagaagac----tttttaaggataacttggtgggtgggtgggaagtcagtgagccaggagtggtgattggtttgggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggacgccaaaagataagatgggccagtttattgatat-ggtggtcccagctgatccatcaagtacagggtctgcaaata-----aagcactgattatagaagcagtttagggagggtcacaatcttgtagcctccagatgcatgactcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360447 478 - 106955855 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagattgtaatcgtccaaggtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaatagttcatgcagagctggctctacgagagaccagagctttattattattcaagtcagtgtctcccagcattcaggaagaagaa----tttttaaggataacttggtgggtgggtgggaagccagtgagccaggagtgctgattggtcagggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaaatt-----aagcactgatcttagaggcagtttagggagggtcacaatcttgtagcctccagctgcatgactcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60654228 482 + 64156825 ggaggctgaggcaggagaatcgcttgaacccgggagggggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcatcaggacaggggagttgcattaagaaataattcatgcagagctggctctacgaaagaccagagtt---ttattactcaaatccgtgtctcccagcattcaggtagaagag-ttgttttaagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcttctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i rheMac3.chr19 I 295 C 0 s macFas5.chr19 55795158 482 + 59248254 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcatcaggacaggggagttgcattaagaaataattcatgcagagctggctctacgaaagaccagagtt---ttattactcaaatccgtgtctcccagcattcagggagaagag-ttgttttaagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcttctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902316 482 + 51301725 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatCACCCAAGgtgttcaccttgcccactgcctagacagagctgattcatCAGGACAGGGGAGTTGCATTAGAAAataattcatgcagagctggctctaccagagaccagagtt---ttattactcaaatccGTGTCTCCCAGCATTCAGGGAGAAGAG-ttttttttAGggataactt----ggtgggtgggAAGCCCGTGGGctaggagtgctgattggtcagggatgaaatAATGGGAGTCAAAGCTATCTTCTCGAACTCAGTCAGTTCCTGAGTGGAGGCCAAAAGATAAGATGGGCCAGTTTATTGAgatgggtggtgccagctgatccatcaagtgcaggttCTGCAAATTATCTCAAGCACTTACCTTAgaagcagtttagggagggtcacaATCttatagcctccagctgcatg--tcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606904 474 + 50890351 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcctcaggacaggggagttgcattagaaaa----tcatgcagagctggctctacgagagaccagag--------ttactcaaatcagtgtctcccagcattcagggagaagagtttttttttagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcctctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 12319 858 + 138250 I a score=859576.000000 s hg38.chr19_GL949748v2_alt 985684 311 + 1064304 aagtcataatttctaatctcgtggctaatgttcgtcctacagggccaatctagtccccaggcaacaaagaggtgtgctttggaaaagggctatcatctttgtttaaacta-----t-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaaggacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggagacagagcgagaccctgtc------------aaa----aaaaaaaaaaaaaaacaagaaGTGA s panTro4.chr19 59919612 298 + 63644993 ------------------------ctaatgttcgtcctacagggccaatctagtccccaggcaacaaagaggtctgctttggaaaagggctatcgtctttctttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaa-gacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggcgacagagcgagaccctgtca-----aaaaaaaaa----aaaaaaaaaaaaaaacaaGAAGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816922 317 + 60714840 aaatcataatttctaatctcgtggctactgttcat-ctacagagccaatctagtccccaggcaacaaagaggtctcctttggaaaaggactatcatctttgtttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggcatgaaaaaggacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggtgacagagcgagaccctgcc----------aaaaa----aaaaaaaaaaaaaaCCAAGAAGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360925 308 - 106955855 aaatcataatttctaatctcgtggctaatgttcatcctacagagccaatctagtccccaggcaacaaagaggtctgctttggaaaagggctatcgtctttgtttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaaagacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccttaggcgacagaacgagaccctgtc------------aaa----aaaaaaaa--------aagaaGTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60654710 333 + 64156825 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagtaaaatggagtcagttaagataagtctctttcactgtctcagtcataattttgcaaaagtggtttcaAGCTGACACAactgcactccaccctgggcgacacagcgagaccctgtcaagaacaaaagaaca----aaaaaCAAAAAAAAACAAGAGGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55795640 326 + 59248254 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagcaaaatggagtcagt-----taagtctctttccctg--tcagtcataattttgcaaaagtggtttcaagctgacacaactgcactccaccctgggcgacacagcgagaccctgtcaagaaaaaaagaaca----aaaaacaaaaaaaaTCAAGAGGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902798 332 + 51301725 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcGTCTTTGTTTAAAccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaAGCAAAATGAAGTCAGTTAAGTtaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaagctgacacaactgcactccaccctgggcgacacagcgagaccctgtcaagaaaaaaagaaca----aaaaacaaaaaaaa-caagaggtGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607378 337 + 50890351 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaacaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagcaaaatggagtcagttaagttaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaagctgacacaactgcactccaccctgggcgacacagtgagaccctgtcaagaaaaacaaaacaaaacaaaaaaaaacaaaaaCAAGCGGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 13177 329 + 138250 aaaccatgatttctaatcttgtggcta---ctagtcctacagtggcaatacagtccccaggcaagaaagaggtctgcttcgggaaagggctattgtctttgtttaaactataaactgcaaacgaagtttctccccaagttagttcagcccacgcccaggaatgaaaaaggacagcttggagtttagaagcaaaatggagtcagttaaattaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaAgatcacataactgcacttcagcctgggtgacagaaccagaccctgac------------cca----aaaaaaaaaaaaaaaaaaaAAGCGG i calJac3.chr22_GL285922_random I 858 I 10 e canFam3.chr1 102786576 0 + 122678785 I a score=155058.000000 s hg38.chr19_GL949748v2_alt 985995 65 + 1064304 AGTCAAGATAGGAGGTAAATTCGGAAGACAGGAAGTGGTGGTAGAAGACAAGAAGTGAAGTCATA s panTro4.chr19 59919910 57 + 63644993 AGTCAAGAT---AGGTAAATTCGGAAGACAGGAAGTGGTGGTAG-----AAGAAGTGAAGTCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817239 65 + 60714840 AGTCAAGATAGGAAGTAAAGTCCGAAGACAGGAAGTGGTGGTAGAAGACAAGAAGTGAGGTCATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361233 65 - 106955855 AGTCAAGATAGGAAGTAACATCGGAAGACAGGAAGTGCTGGTAGAAGACAAGAAGTGAGGTCATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655043 65 + 64156825 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTGGAGGTAGAAGACTAGAAATGATGTCATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55795966 65 + 59248254 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTGGAGGTAGAAGACTAGAAATGATGTCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903130 65 + 51301725 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTAGAGGTAGAAGACTAGAAATGATGTCATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607715 65 + 50890351 AGTCAAGATAGGAAGTAAAGTCGGAAGACACCAAGTGGCGGTAGAAGACTGGAAATGAGGTCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 13516 65 + 138250 AATCAAGACAGGAAGTAAAGTCAGCAGACAGGAAGTGATGGGAGAAAACAGGAAGTGAGGTCGTA i calJac3.chr22_GL285922_random I 10 T 75 e canFam3.chr1 102786576 0 + 122678785 I a score=1542446.000000 s hg38.chr19_GL949748v2_alt 986060 576 + 1064304 CAGGAAGTAAAGTCAGAAGACAGGAAGTGAAGTAAGAAGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACAGGAAGT-AAAATCAGAAGACAGGAAGTGACGTCAAACCAGGATTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACGGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCCGAAGTGAACAGGTAGCATCAGGTGTGCCATTTCAGTGACTGGGCACAGCCCAGGCACCCACATCTCTCTGCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGAGA-TCCTGGATTGAATGAC------TACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAGCACTCATAGCTTTGCATTTCCACTCTGCATTACTTGTATTTTTATTATTTTGTGATATTCGTAATAAT---TTATTATAAAACTGTGTTATT--TTTGGATATTTTTAAGTTAAAATGCGATTTTTT s panTro4.chr19 59919967 582 + 63644993 CAGGAAGCAAAGTCAGATGACAGGAAGTGAAGTAAGAAGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACAGGAAGT-AAAATCAGAAGACAGGAAGTGACATCAAACCAGGACTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCCGAAGTGAACAGGTAGCATCAGGTGTGCCATTTCAGTGACTGGGCACAGCCCAGGCACTCACATCTCTGTGCAGTGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGAGA-TCCTGAATTGAATGACTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAACACACATAGCTTTGCATTTCCACTCTGCATTACTTGtatttttattattttgtaatatttgtaataat---ttattataaaaCTGTGTTATT--TTGGGATATTTTTAAGTTAAAATGCGATTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817304 557 + 60714840 CAGGAAGCAAAGTCAGAAGACAGGAAGTGAAGTA--------------------AGAAGACAGGAAGTGAGATCATACAGGAAGTAAAAATCAGAAGACAGGAAGTGACGTCAAACCAGGA-TTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTAAGGGGAAC--GTCTT-----TCTCCTGCTCAGCCCGAAGTGAACAGGTGGCATCAGGTGTGCCATTTGAGTGACTGGGCGCAGCTCAGGCACCCACATCTCCCTTCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCGGAGATGAGA-TCCTGGATTGAATGACTTGAATTACTGTGGAAAGCGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAGCACACATAGCTTTGCATTTCCACTCTGCATTACTTGtatttttattattttgtaatatttgtaataat---ttattataaaaCTGTGTGATT--TTTGGATATTTTTAAGTTAAAATGCGGTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361298 581 - 106955855 CAGGAAGCAAAGTCAGAAGACAGGAAGTGAAGTA---AGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACATCAAGT-AAAATCAGAAGACAGGAAGTGACGTCAAACCAGGACTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCTGAAGTGAACAGGTAGCATCAGGTGTGCCATTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGATA-TCCTGGATTGAATGATTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TATTAGCCGTCTAGCACACATAGCTTTGTATTTCCACTCTGCattacttgtatttttattattttgtaatatttgtaataatttattattatAAAACTGTGTTATT--TT-GGATATTTTTAAGTTAAAATGCGATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655108 576 + 64156825 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAACCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCACTATTTTCTGTTGTTTTTTTCCTTCATTTTCCGAGACGAGG-TCCTGGATTGAGTGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATACTTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTAAAATGTGATTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55796031 576 + 59248254 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAACCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCACTATTTTCTGTTGTTTTTTTCCTTCATTTTCCGAGACGAGG-TCCTGGATTGAGTGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTGTCTTGTTCTTTAATTTTGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATAATTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTAAAATGTGATTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903195 574 + 51301725 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAATCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCactattttctgttgcttttttccttcattttccgaGATGAGG-TCCTAGCTTGAATGGCTTGAATTACCATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTgttctttaattttgttgttgtttgttatgACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCActacttgtatttttattattttgtagtatttgtaataatttgttattttaaaac--tgttattagtttgGATATTTTGAAGTTAAAATGCGATTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607780 576 + 50890351 CAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTAAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAATCCAGGAAGTGCAGTC-GAAGGTAGGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCCGGAGGAACTTGTCTTTCCCCTCTCCTCTGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTAACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAGCACCAGAGACCTCTGCACTATTTTCTGTTGCTTTTTTCCTTCATTTTCCGAGATGAGG-TCCTGGATTGAATGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTCCGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATAATTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTGAAATGCGATTTTTT i chlSab2.chr6 C 0 I 982 s calJac3.chr22_GL285922_random 13506 574 + 138250 CAGGAAGTGAAATC--AAGACAGGAAGTAAAGTCAGCAGACAGGAAGTGATGGGAGAAAACAGGAAGTGAGGTCGTACAGGTAGT-AAAGTCTGCAGACAGGAAGTGACGTTTACACCGGAAGTATTGTCAGAGGGCAGGCAGGAAGTGAAGTCAGAAGCCAAGAAGTGGCCAGGGAGAACTTGTCTTTCCCCTCTCCTCCTCAGCCCCAAGTGAAAAGGTAGCATCAGGTGTGCCATTTGAGTGACTGGACACAGCTCAGGCATCCACATCTCCCTTCAGC-------------CCATCAGAGACCTCTCCACTACCTTCTTTTGCTTTTTTCCTTCA-CTTCAGAGATGAAATTCCCAGATTGAACGGCTTCAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTACCTTGTTTTTTAATTATGTT----TTTGTTGTGACTAATTGAGTTTTAGCCTTTTAGCACACATAGCTTTGCATTTCCACTCTGCAGTACTTGCATTTTTATTACTTTGTAATGTTTGTAATGTG---TTATTATAAAGCTGTGTTATTGGTTTGG-CATTTTGAAGTTAAAATGTAATTTTTA i calJac3.chr22_GL285922_random T 75 C 0 e canFam3.chr1 102786576 0 + 122678785 I a score=9821.000000 s hg38.chr19_GL949748v2_alt 986636 6 + 1064304 AACTAA--- s panTro4.chr19 59920549 6 + 63644993 AACTAA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817861 6 + 60714840 AACTAA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361879 6 - 106955855 AACTAA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655684 6 + 64156825 AACTAA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55796607 6 + 59248254 AACTAA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903769 6 + 51301725 AACTAA--- i papAnu2.chr19 C 0 I 1798 s calJac3.chr22_GL285922_random 14080 9 + 138250 AACTGCAAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I a score=3893.000000 s hg38.chr19_GL949748v2_alt 986642 2 + 1064304 GT s panTro4.chr19 59920555 2 + 63644993 GT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817867 2 + 60714840 GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361885 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655690 2 + 64156825 GT i rheMac3.chr19 C 0 I 845 s macFas5.chr19 55796613 2 + 59248254 GT i macFas5.chr19 C 0 I 976 s papAnu2.chr19 47905573 2 + 51301725 GC i papAnu2.chr19 I 1798 C 0 s calJac3.chr22_GL285922_random 14089 2 + 138250 GT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I a score=781.000000 s hg38.chr19_GL949748v2_alt 986644 1 + 1064304 G s panTro4.chr19 59920557 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817869 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361887 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55797591 1 + 59248254 A i macFas5.chr19 I 976 C 0 s papAnu2.chr19 47905575 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14091 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I e rheMac3.chr19 60655692 845 + 64156825 I a score=472153.000000 s hg38.chr19_GL949748v2_alt 986645 162 + 1064304 GCAGTATGCAAAGCAAGTGGTTCAGAACTC-TCCCCCATTAATAAGTCTTCTCTCCTGAAAGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACTTCTAAAAG-AAAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC s panTro4.chr19 59920558 162 + 63644993 GCAGTATGCAAAGCAAGTGTTTCAGAACTC-TCCCCCATCAATACGTCTTCTCTCCTGAAAGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACTTCTAAAAG-AAAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817870 157 + 60714840 GCAGTATGCAAAGCAAGTGTTTCAGAACTCTTCCCCCATCAATAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTGAATTCTGTTTAACAGCATACTTCT-------AAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361888 162 - 106955855 GCAGTATGCAAAGCAAGTGTTTCAGAAGTC--TCCCCATCAATAAATTTTCTCTCCTGAAGGAAACAATTTTGAAACTTCCTGTTCTTAATTCTGTGTAACAGCATACTTCTAAAAGAAAAAAGTGTATACTGTCATTATTTATTGTGTTACAAAAATATACAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60656537 162 + 64156825 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCGTCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACGTCTAAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i rheMac3.chr19 I 845 C 0 s macFas5.chr19 55797592 162 + 59248254 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCGTCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACGTCTAAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905576 162 + 51301725 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCATCAGTAAATCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCatacttctaaaag-aaaagatgtatactattattatttattgtgttataaaaatatacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609338 162 + 50890351 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCATCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTGCCTGTTCTTAATTCTGTTTAACAGCATACGTCTTAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i chlSab2.chr6 I 982 C 0 s calJac3.chr22_GL285922_random 14092 162 + 138250 GCAGTATGCAAAGCAAGTGTTTGAGAACTT-TCCCCCATCAATAAGTCTTCTCCCCTAAAGGAAACAGTTTTGAAACTTCCTGTTCTTAATTCTGTTTAACAGCTTACTTCTAAAAG-AAAACGTGTATGCTGTTATTAtttattttgttacaaaaatatacat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I a score=845.000000 s hg38.chr19_GL949748v2_alt 986807 1 + 1064304 G s panTro4.chr19 59920720 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818027 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362050 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47905738 1 + 51301725 a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609500 1 + 50890351 g i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=4820.000000 s hg38.chr19_GL949748v2_alt 986808 5 + 1064304 CACCT s panTro4.chr19 59920721 5 + 63644993 CACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818028 5 + 60714840 CACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362051 5 - 106955855 CACCT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47609501 5 + 50890351 cacct i chlSab2.chr6 C 0 I 422 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=177412.000000 s hg38.chr19_GL949748v2_alt 986813 340 + 1064304 Ttcatgcacgtccgtgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtctgacaagagagtcagcgaagggggataggggtggggccgttttataggatgtgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtcggggtcataaggtgctcagtaggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcgcttcttttgtggtggaatgtcatcagttaaggcacgaac s panTro4.chr19 59920726 338 + 63644993 Ttcatgcacgtccgtgtgaagagaccaccaaacagactttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtccgaaaagagagtcagcgaagggggac--gggtggggccattttataggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtgggggtcataaggtgctcagtaggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcgctttttttgtggtggaatgtcgtcagttaaggcaggaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818033 339 + 60714840 Ttcatgcacgtccgtgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgtaggcaggctgagtccgaaaagagagtcagcgaagggagat-ggggtggggccgttttatgggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtgggggtcacaaggtgctcagtgggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggCAGGAAC i ponAbe2.chr19 C 0 I 48100 s nomLeu3.chr10 103362056 337 - 106955855 Ttcatgcgcgtccgtgtgaagagaccaccaaacaggctttgtgtgggcaataaagcttttaatcacctgggtgcaggtgggctgagtccgaaaagagagtcatctaagggagat-ggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaggggg---gttctctggcgggcagagtgggggtcacaaggtactcagtaggggagcttttgagccaggattgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaac i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=73474.000000 s hg38.chr19_GL949748v2_alt 987153 293 + 1064304 cggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacagcaaaaatttttggggg-tggtatggagagataatgggtgatgtttctcaaggctgctttgagcaggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggggtgacattgtgggattgttaaaagaaacattt s panTro4.chr19 59921064 294 + 63644993 cggccatctggttgtgtacgtgcaggccacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacagcgaaaatttttgggggatggtatggagagataatgggcgatgtttctcagggctgcttcgagcaggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggcgtgatattgtggggctgttagaagaaacattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103362393 291 - 106955855 cggccatctggatgtgtacttgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaacgaaatagtggtaaagtgttgggacggcaaaaattttgggcgg-tggtatggagagataatgggagatgtttctcagggcttcttcgagtgggattaggggcggcgtgcgaacct-gagtgggagcgattaagctgaaggaagattttgtggtaaggggtgatattgtgggactgtta-aagaaacattt i nomLeu3.chr10 C 0 I 100 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=153925.000000 s hg38.chr19_GL949748v2_alt 987446 1768 + 1064304 gtcatttagaattattggtgatggcctggatacagttttgtatgaattgaaaaactaaagggaataaggaaaggagaaaaacaggtattaaaggtctaagaattgggacgactcaggacatctaattagaaagtgcctaaggaggttcagcatagccttgccagcaaagat-tatttatttattttaagagttaacagtggcggtatggggatagtaccaggagataccagctgtgctggcttggagaaacagtgtaaactggcagtgtaaacaagagcagggcatgtgtgagtagttgagaacggtgaataggagtatgactagacagaagatagtagggatgacaagttttttggggcacaatctaagtTggtctggtgtctggaatgagactggggcctaataaaaaggagtgtctacacaggagcttaaatgggctgtatcttgtagcattccaaggacaggcctgaattctggaagcgaaaatggtaaaagtattgtccagtcctttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtctgtcactgaatactaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtctgttagcagactgtatagaggtgggaaggctgaactgaggaattttgtctgacagaagggaatgacaaggctaaactgaagaattatgtctgacagaagggaagaaatgactgcggtggccttctcagaccctgtaggaaaggactgtacttacccagtgaaagtgtctacctagactaagaggtattttagttatcttactcggggcatgttgagtaaagctaatttgccagtcctgggcgggggcaaatccttgagcttgatgtgtagggaagggagggggcctgaataatccatgaggagtagtagaatagctgatgcaacactgagaagtgatttctttgaggatagatttccacaatggaaaggaaatgagaggttctaagaggctggctagtggcttgtaccatagcatagcctgcctttgctggtgtgtggcgattaggcctggtggaaccgccatcaataaactaagtgtgatcagggtgagaaacagggaagaaggaaatgtggggaaatggggtgaacgtcaggtggatcagagagatgcagtcatgggggtcaggtgtggtatctggaataatgtgggaggccagattgaagtccgggccaggaacaatggtaattgtgggacttaacaaagagtgagtacagctgaaggagccagggagcagaaagtatatgcatcaggtgtgagtaagaaaatagattttggaaattatgagagctgtagagagtgagttgagcatagtttgtgattttgagggcctctaaaagtattaaagcagcggcagccacagcacgcagatatgagggctaggctaaaacagtaaggtcaagttgtttggacagaaaggctacagggtgtggtcctggctcttgtgtaagagttctgaccgcgctaaccatgcctaggaaggaaaggagttgttgttttgtagaaggtgctggggcttgagagatcagtcagacacgatcagcagggagagcacgtgtgtttttatgagaattatgccgagataggtaacagatgaggatgaactttgggcttgactgaagtaatgggggctgtctgtgaaaccttgcagcagtacagcccaggtaatttgctgagcctaatgggtgtcagggtcagtccaagtgaa s panTro4.chr19 59921358 1753 + 63644993 gtcatttagaattattggtgatggcctggatgcagttttgtacgaattgaaaaactaaatggaataagagaaggtgaaaaacaggcattaaaagtctaagaattgggaggacctaggacatctaattagagagtgcctaaggaggttcagcatagtcctgccagcaaagatgtatttatttattttaagagttaagagtggcggtttggggatagtaccaggagatatcagctgtgctggcctggagaaa-------------cagtgtaaacaagagcagggcatgtgtgagtagttgataacagtgaataggagtatgactagacagaagataggagggatgacaagttttttggggcacagtctaagtTGGTTtggtgtctggaatgagactggggcctaataaaaaggagtgtctatacaggagcttaaatgggctgtatcttgtagcattccgaggacaggcctgaattctggaagcgaaaatggtaaaagtattgtccagtcctttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtctgtcactgaatactaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtctgttatcagactgtatagaggtgggaaggctgaactgaggaattatgtctgacagaagggaatgacaaggctaaactgaagaattatgtctgacagaagggaagaaatgactgcggtggccttctcagaccccataggaaaggactgtacttatccagtgaaagtgtctacctagactaagaggtattttagttatcttactcgaggcatgttgagtaaagctaatttgccagtcctgggtgggggcaaatccttgagcttgatgtgtagggaagggagggggcctgaataatccctgaggagtagtagaatagcagatggaacactgagaagtgatttctttgacgatagatttccacgatggaaaggaaatgagaggttctaagaggcgggctagtggcttgtaCTatagcatagcctgcctttgctggtgtgtggcgattaggcctggtggaaccaccatcaataaatcaagcgtgatcagggtgagaaacagggaagaaggaaatgtggggaaatggggtgaatgtcaggtggatcagagagatatagtcatgggggtcaggtgtggtatctggaataatgtgggaggccagactgaggtccggggcaggaacagtggtaattgtgggacttaacaaagagtgagtacagctgaaggagccggggagcagaaagtatatgcgtcaggtgtgagtaagaaaatagattttggaaattatgagagctgtagagagtgagttgagcatagtttgtgattttgagagcctctaaaagtattaaagcaccggcagctgctgctcacagacatgagggctagcctaaaacagtaaggtcaagttgtttggacagaaaggctatagggtgtggtcctggcttttgtgtaagaattccgaccgcgctaaccatgcctaggaaggaaagga---gttgttttgtagaaggtgctggggtttgagagatcagtcagacacgatcagcagggagagcacgtgtgtttttatgagaattatgccaagataggtaacagatgaggatgaactttgggcttgactgaagtaatgggggctgtctgtgaagccttgcagcagtacagcccaggtaatttggtgagcttaaagggtgtcagggtcagtccaagtgaa i panTro4.chr19 C 0 I 10 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=0.000000 s hg38.chr19_GL949748v2_alt 989214 913 + 1064304 agcgaagagaggctgggacgaggggtgcaggggaatagtgaaaaaagcatctttaagatcaagcatggaatagtgagttgtggaggaaggtattgaggacaaaagagtgtaggggttgggcaccacagggtgcataggcaaaacaatttgataaggcgcagatcctgaactaatctgtaagacttttccggtttttggacaggtaaaatgggggaattgtaaggagagtttataggttttagaagcccatgctatagcaggcgagtgataacaggctttaatccttttaaagtgtgctgtgggatgggatattggcattgagcagggtaagggtgattaggttttaatgggatggtaacgggtatgtgatcagttgccagggaaggagtagagatgtcccatacttgtgggttaaggtgggggaataggagaggaagacgcgaaggaggctttgggttgaggagaagggtggcaatgagatgcggctgtagtccaggaatagtcagggaagcagataatttggttaaaatatctcggcctaataagggaactgggcaggtggggataactaaaaaagagtgcataaaagagtgttgtccaagttggcaccagagtgggggagttttcaggggtttagaagcctggccgtcaatacccacaacagttatggaggcaagagaaacaggcccttgaaaagaaggtaatgtggagtgggtagcctccgtattgactaaggcgacggacttaccttccaccgtgagtgttacccgaagctcggcatccgtgatggtctacagagcttccgaggcgattgggcagcatcagtcttcagccgctaagccgagaaggagtcagagagccttgggccagagttccaggggctctgggagtggctgccaggtgagttgaacag e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=13937.000000 s hg38.chr19_GL949748v2_alt 990127 154 + 1064304 tccgatttccagtggggtcccgcacagatgggacacggcttaggaggaatcctgggctgcaggcattccttggcctggtggtcagatttctggcacttgtagcaagctcctgggggaggaggttctggaggaacgcctggccgctgcggttcag s ponAbe2.chr19 56866472 153 + 60714840 tccgatttccagtggggtcctgcacagatgggacacggcttaggaggaatcctgggctgcaggcattccttg-cctggtggtcagatttctggcacttgtagcaagctcctgggggaggaggttctggaggaacgcctggccactgcggtttag i ponAbe2.chr19 I 48100 I 11 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=0.000000 s hg38.chr19_GL949748v2_alt 990281 5 + 1064304 ttccc e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56866625 11 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=163881.000000 s hg38.chr19_GL949748v2_alt 990286 1997 + 1064304 ttcttgtgtgctggagatgtggctggggtttgtctcacagtggaggcaaggaattgcaacttttttctattattgtacaccttgaaggcgaggttaattaaatcctgttgtggggtttgagggccggaatttaattttt-ggagttttatttaatgtcgggagcagattgggtaataaaatgtgtattaagaataagacggccttttgacttttaagggtctagggctgtaaagcttctcagggttgctggcgaacgagccatgaattgggctggatttttatatttgatgaaaaagagcctaaacactatctgatttgggataaagaaaaaggagcattaaccttgactatgcctttagctccagccacctttctaagagtaaattgctgggcaggtggaagagggctagtcactgaacgaaactgtaagctggaccaggtgtggggaggggaggtgataaaaagataatacggtggaggagcggaggctgaggaagaattgggacctagctcagcctggggaggaggg-agaggtcagacgggtctgtagaaaaggaagattagaaagactcagcgacgcttggggttgagactgaggggacaggcaggagggaaagaaggaagatttgggacgagttgcactgggcacagagactaggaagggactgatgtgtaaaagaatgcctggacgtcaggcacctcagaccgtttgcccattttacgacaagaattatttagatcttgcaggatggaaaaattgaaagtgctgttttctggctatttggaactgctgtccagtttgtattggggtcaagcggcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaagtttttgagaacacaggccaagggagagaaggaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcctagagaaaagagagagtagagacacggagggaaggggttcgggagttcttaccttccagaaaagcgggaaaggggttgg-------------------ggcatggatataaggggttggggcacagagataagaggttggggcatggaaataagggatcagggtgcagagata-------------------------------------------cgaggttggggtacttgcccctc---tagaaaagcgggacttgccgctaagagtgaaggagaaggggttgggggtttcttgccccccagaaaggtggagaaggggtagagacatggagaggaggggttggggaacttgccccttccccagaaaagtgggacttgccactaagggtgaaggaccaaggcaggcatccctgcgtgatctgacacctctgaagcgtgggtatataatcagagaggcgtccctgcaatgattaaacgccaagggaaggctgccttccctagtccgtgaccggcgccggagttttgggtccacagataaaacgtgtctcctttgtctctaccagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaagaagaggtcgcttacccaatttaaacttggtgagatgttccttgggctggtgggtctgaggacctgaggtcgtaggtggatctttttcacagagcaaagagcaaga---caggggattgatctcccaagggaggtcccccgatccaagtcacggcaccaaaTTtcatgtgcgtccatgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaat--cacctgggtgcaggtgggctgagtccgacaagagagtcagcgaagggggat-ggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaagcggggttgttctctggcgggcagagtgggggtcacaaggtgctctgtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagacaatgtcatcagttaaggca s ponAbe2.chr19 56866636 2059 + 60714840 ttcttgtgtgctggaggtgtggctggggtttgtctcacagtggaggcaaggaattgcaacttttttctattattgtacaccttgaaggtgaggttaattaaatcctgttgtggggtttgagggccggaatttaattttttggagttttatttaatgtcgggagcagattgggtaataaaatgtattttgagaataagacggccttttgaccttttagggtctagggctgtaaag--tgtcagggttgctgccgaacaagtcatgaactgggctggatttttatatttgatgaaaaagagcctaaacgctatctgatttgggataaagaaaaaggagcatgaaccttgactatgcctttagctctagccacctttttaagagtaaattgctgggcaggtgggggagggctagtcacagaacgaaac------ccggacccggtgtgaggaggggaggtgataaaatgattatagggtggaggagcagaggctgaggaagaagtgggacctacctcagcctggcaaggaggggagaggtcagatggatctgtagaaaaggaagattagaaagactcagcgacgcttggggttgggactgaggggacaggcgggagggaaagaaggaagatttgggacgagttgcgctgggcacagagactagggagggactcatatgtaaaagaatgcctggacatcaggcatctcagactgtttgcccattttacgacaagaattatttacatcttgcaggatggaaaaattgaaagtgtcattttccggctatttggaactactgtcaggtttgtattggggttaagcggcgttgcagaagaaaataaggcatttaggttttaggacaggtgtgacttgaagaggttttaagtttttgagaacacaggccaagggaga--agaaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcacagagaaaagagagagtagagacacggagggaaggggtttgggggttcttaccctccagaaaagcaggaaaggggttggtgcagagataagaggtcggggcacggaaataagggattggggcacagagataagaggttggggcatggaaataagggattggggtgcagagatataagaggttggggcacggaaataagggattggggcacgagatacgaggttggggtacttgtccctcctgtggaaaagcgggacttgccgctaagagtgaaggagaaggggttgggggtttcttgccccccagaaaggtggagaaggggtagagacacggagagaaggggctggggtacttgccctttccccagaaaagcgggacttgccgctaagggtgaaggaccaaggcaggcatccctgcgtggtctgatgcctctgaaacctgggtgaataatcagagaggcgtccctgcagtgattaaacaccaagggaaggctgccttccc-agtccgtgaccggcgccggaggtttgggtccacagataaaacgtgtctcctttgtctctaccagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaagaagaggccgcttacctaatttaaacttggtgagatgtttcttgggctgataggtctgaggacccgaggtcgtaggtggatctttttcacggagcaaagagcaggaggacaggggattgatctcccaagggaggtcccccgatccgagtcacggcaccaaaTTtcatgtgtgtccatgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggggcaggcaggctgagtccaaaaagagagtcagcgaagggagataggggtggggctgttttatgggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcaggcagagtgggggtcacaaggtacccagtgggggagcttttgagcaacgatgagccaggagaagggatttggcgagagaatggcatcagttaaggca i ponAbe2.chr19 I 11 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=33411.000000 s hg38.chr19_GL949748v2_alt 992283 126 + 1064304 gtaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaaccagccatatggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgaca s panTro4.chr19 59923121 126 + 63644993 GTAACaggccattttcccttcttttgtggtggaatgtcatcagttaaggcaggaaccggccatatggatgtgtatgtgcaggtcacagggtatatgatggcttagcttgggctcagaggcctgaca i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56868695 126 + 60714840 ggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaaccggccatctggatgtgtacatgcaggccacaggggatatgatggcttagcttgggctcagaggcctgaca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=1500.000000 s hg38.chr19_GL949748v2_alt 992409 1 + 1064304 G s panTro4.chr19 59923247 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868821 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656699 1 + 64156825 g i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797754 1 + 59248254 g i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14254 1 + 138250 g i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C a score=172329.000000 s hg38.chr19_GL949748v2_alt 992410 101 + 1064304 CACCTACCTAAAAAATTCCAATAGCACTAAAAGGGTGTGTACAAAATGCAGTGGC-TGACTAACCATCTCCTCCATTGCTCCGCCTAAGAGACACCCACTTT s panTro4.chr19 59923248 101 + 63644993 cacctacctaaaaaattccaatagcactaaaagggtgtgtacaaaatgcagtggc-tgactaatcatctcctccattgctccgcctaagagacacccacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868822 101 + 60714840 CACCTACCTAAAAAATTCCAATAGCACTAAAAGGGTGTGTACAAAATGCAGTGAC-TAACCAACCGTCTCTTCCATTGCTCCGCCTAAGAGACACCCACTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656700 102 + 64156825 cacctccttaaaaaattccaatagcactaaaagggtgtgtacaaaatgcaatggcttaaccaaccgtctcttccattgctccacctaagagacacccacttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797755 102 + 59248254 cacctccttaaaaaattccaatagcactaaaagggtgtgtacaaaatgcaatggcttaaccaaccgtctcttccattgctccgcctaagagacacccacttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905739 101 + 51301725 cacctgCTTAAAAAATTCCAATAGCACTAAAAGGGTTTGTACAAAATGCAATGGC-TAACCAACCGTCTCTTCCATTGCTCCGCCTAAGAGACACCCACTTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14255 97 + 138250 catctactttaaaattttcaatagcactaaaagggtatgtacaaaatgcaatggc-taaccaaccatctcttccattgct----ctaagagacacccacttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I a score=393349.000000 s hg38.chr19_GL949748v2_alt 992511 176 + 1064304 TAGCTGTTTTCTTTAGGAACTTGTTAATATTAGGTTTCTAAAAACATGTAACCATGTG---AATGAGCTTAGACTTACTGGATTCCTATCATAATAGGCGGGGCCTTAGTTATTCTACAGCGTTGTTCTTACTG----TTTTTTCTCTTCCAATGTTTATCTCTATGTCTGCATATCAACATT s panTro4.chr19 59923349 176 + 63644993 tagctgttttctttaggaacttgttaatattaggttgctaaaaacatgtaaccatgtg---aatgagcttagacttactggattcctatcataataggcggggacttagttattctacagtgttgttcttactg----ttttttctcttccaatgtttatctctatgtctgcatatcaacatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868923 176 + 60714840 TATCTGTTTTCTTTAGGAACTTGTTAATATTAGGTTTCTAAAAATGTGTAACCGTGTG---AATGAGCTTAGACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAGTGTTGTTCTTACTG----TTTTTTCTCTTCCAATGTTTATGTCTATGTCTGCATATCAACATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656802 173 + 64156825 tagctgttTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAG---TGTTCTTACTG----TTTTTTCTTTTCCAATGTTTATGTCTACGTCTGCACATCAATATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797857 173 + 59248254 tagctgttTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAG---TGTTCTTACTG----TTTTTTCTTttccaatgtttatgtctacgtctgcacatcaatatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905840 176 + 51301725 TAGCTGTTTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTCGTTCTTCTACAGTGTTGttcttactg----ttttttcttttccaatgttTATGTCTACGTCTGCACATCAATATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609928 176 + 50890351 TAGCTGTTTTCTTGAGGAACTTGTTAATATTAGATTTCTAAAACTGTGTAACCGTGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAGTGTTGTTCTTACTG----TTTTTTCTTTTCCAATGTTTCTGTCTACGTCTGCACGtcaatatt i chlSab2.chr6 I 422 C 0 s calJac3.chr22_GL285922_random 14352 182 + 138250 tggctgttttcgttagg-tctttttaatattaggtttctaaaaatgtgTAACCATGTGAATAATGAACTTAGACTTACTAGATTCCTATCATAATAGGTGGGGACTTTGTTCTCCTACAGTGTTGTTCTTACTGTTTTTTTTTTCTCTTTCAATGTTTATGTCTACGTCTGCATATCAGTACT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=50167.000000 s hg38.chr19_GL949748v2_alt 992687 35 + 1064304 CAGTATCACAtttttttttt-------ttgagacagagtctc s panTro4.chr19 59923525 33 + 63644993 cagtatcacatttttttttt---------gagacagagtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869099 41 + 60714840 CAGTATCACttttttttttttt-ttttttgagacagagtctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656975 42 + 64156825 CAGTATCACttttttttttttttttttttgagacagagtctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798030 37 + 59248254 cagtatccc-----tttttttttttttttgagacagagtctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906016 42 + 51301725 cagtatcacttttttttttttttttttttgagacggagtctc i papAnu2.chr19 C 0 I 299 s chlSab2.chr6 47610104 40 + 50890351 cagtatcac--tttttttttttcttttttgagacagagtctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14534 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=460204.000000 s hg38.chr19_GL949748v2_alt 992722 234 + 1064304 actctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctc--------------------------------agtctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacagggtttcaccatgttggctgagctggtctcgatctcctgacctcgtgatctgcccacctcagcctcccgaagtgctgggattacaggcatgagccaccacgcccggc s panTro4.chr19 59923558 266 + 63644993 gctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagtctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttctgtatttttagtagagacagggtttcaccatgttggccgagctggtctcgatctcctgacctcgtgatctgcccacctcagcctcccgaagtgctgagattacaggcatgagccaccacgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869140 266 + 60714840 gctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctccgactcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacagggtttcaccatgttagctgggctggtctcgatctcctgacctcgtgatctgcccacctcagcctcctgaagtgctgggattacaggcatgagtcaccacgcccggc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60657017 266 + 64156825 actctgtcacccagactggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggctgatctcgatcttctgaccgggtgatccgcccgcctcagcttcccaaagcgctgggattataggcatgagccaccacgcctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798067 266 + 59248254 actctgtcacccaggctggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggctgatctcgatcttctgacctggtgatctgcccgcctcagcttcccagagcgctgggattataggcatgagccaccacgcctggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906357 266 + 51301725 actctgtcacccagactggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcggcctcctgagtacctgggactacaggcgtgtgccaccacgactggctaatttttgcatttttagtagagacggggtttctccatgttggccaggctgatctcgatcttctgacctggtgatccgcccgcctcagcttcccaaagcactgggattataggcgtgagccaccatgcctggc i papAnu2.chr19 I 299 C 0 s chlSab2.chr6 47610144 266 + 50890351 actctgtcatccagactgaagtgcagcagcacaatctcagctcactgcagcctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctggggctacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctgatcttgatcttctgacctggtgatccgcccgcctcagcttcccaaagcgctgggattacaggcatgagccaccgcgcctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14534 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=413140.000000 s hg38.chr19_GL949748v2_alt 992956 201 + 1064304 cAGTATCACATGTTTATACCCACAGATATTCGCAGCCGAGAATTTTCGGGTAATATAACTTGCTTCTTTTATTTTTGTTGTTGTTATTGTTCCCCTAAAGTTTATAtttgttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgacagcagtggtgcaatcatggctcactgcagcctcaa s panTro4.chr19 59923824 199 + 63644993 cagtatcacatttttatacccacagatattcgcagctgagaattttcgggtaatataacttgcgtcttttatttttgttgttgttattgttcccctaaagtttatat--gttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgagagcagtggtgcaatcatggctcactgcagcctcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869406 201 + 60714840 cAGTATCACATTTTTATACCCACAGATATTCGCAGCTGAGAATTTTCAGGTAATATAACTTGCTTCTTTTATTTTTGTTGTTGTTATTGTTCCCCTAAAGTTTATAtttgttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgagagcagtggtgccatcatggctcactgcagcctcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60657283 183 + 64156825 cAGTATCACATTTTTATACCCACAGATATTCACAGCTGAGAATTTTCAGGTAATATAACTTGCTTCTTTTATTTTTGTGGTTG---TTGTTCCCCTAACGTTTATAtttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcct--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798333 183 + 59248254 cagtatcacatttttatacccacagatattcacagctgagaattttcaggtaatataacttgcttcttttatttttgtggttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcct--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906623 186 + 51301725 cagtatcACATTTTTATACCCACAGATATTCACAGCTGAGAATTTTCAGGTAATATAacttgcttcttttatttttgttgttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatgactcactgcagcctcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610410 186 + 50890351 cagtatcacatttttatacccacagatattcacagctgagaattttcaggtaatataacttgctgcttttatttttgttgttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgcggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcctcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14534 192 + 138250 CAGTATCACATGTTTATACTCACAGATATTCACAGTTGAGAATTTTTAGGTAATATAACTTGCTTCCTTTATTTTTTTTTT-----TCCTTCCCCTAAAGTTTATATTTG----TCAttttcattttcttttgaggcagggcctcactctgtcagctaggcttgagagcagtggtgcagtcgtggctcactgcagcctcaa i calJac3.chr22_GL285922_random C 0 I 104 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=385142.000000 s hg38.chr19_GL949748v2_alt 993157 201 + 1064304 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctaa-ttttttatattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcgaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac s panTro4.chr19 59924023 201 + 63644993 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctaa-ttttttatattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcgaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869607 202 + 60714840 cctccctgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctgatttttttgtattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcaaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac i ponAbe2.chr19 C 0 T 11733 s rheMac3.chr19 60657466 201 + 64156825 -----------------------ctacctcagcctcctgagtatctgagagtaggcatgtggtaccacacccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcgatcctgcctcattctctcagagtgctgggaGTGAGCCCACTCTGAGCCCACACTTACAGGTGTGAGCCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798516 178 + 59248254 -----------------------ctacctcagcctcctgagtatctgagagtaggcatgtggtaccacacccagctaa-ttttttgtattttttgtatatgagactaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcgatcctgcctcattctctcagagtgctggga-----------------------ttacaggtgtgagccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906809 201 + 51301725 cctccccgggctcaggtgatccccaacctcagcctcctgagtatctgagagtAGGCATGTggtaccacacccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcaatcctgcctcattctctcagagtgctggga-----------------------ttacaggtgtgagccac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610596 201 + 50890351 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggtatgtggtaccacatccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtctcgaactcttaggctccagcgatcctgcctcattctcccaaagtgctggga-----------------------ttacaggtgtgagccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14830 149 + 138250 CCTCcctgggctcaggtgatccccatcctccgtcttctgagtacctgagagtaggcacgtgctaccatacccagctaa--tttttgtgttttttgtatatgaggtggtgtttcacaatggcgtccaagctagtctgaaacttctgggctca-------------------------------------------------------------------------- i calJac3.chr22_GL285922_random I 104 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=155623.000000 s hg38.chr19_GL949748v2_alt 993358 94 + 1064304 tgtgccTAGGCTATACTGGTCTTTTTAAAATCTACTTAGTTTACTTGACCTCTAAAATTATTTTTCCTCTGTCTTCTGATAGCATCTCAGTATG s panTro4.chr19 59924224 92 + 63644993 tgtgcctaggctatactggtcttttaaaaatctacttagtttactTGACCTCTAAAATTATTTTTCCT--GTCTTCTGATAGCATCTCAGTATG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60657667 94 + 64156825 TCTGCCTAGGCTATACCTGTCTTTTAAAAATCTACTTAGTTTACTTGACCTCTGTAATTATTTTTCATCTGTCTTCTGATAGCATCTCAGTATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798694 94 + 59248254 tctgcctaggctatacttgtcttttaaaaatctacttagtttacttgacctctgtaattatttttcatctgtcttctgatagcatctcagtatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907010 94 + 51301725 tctgcctagGCTatacttgtctttttaaaatctacttagTTTACTTGACctctgtaattatttttcatcTGTCTTCTGATAGCATCTCAGTATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610797 94 + 50890351 tctgcctaggctacacttgtctttttaaaatctacttagtttacttgacctctatcattatttttcatctgtcttctgatagcatctcagtatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14979 86 + 138250 --------ggcaatactTGTctttttaaaatctacttagtttacttgacctctataattatttttcctctttcttctaatagcttctcagtatg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56869809 11733 + 60714840 T e nomLeu3.chr10 103362684 100 - 106955855 I a score=57556.000000 s hg38.chr19_GL949748v2_alt 993452 24 + 1064304 ATTTTCCACTATGTTAAGACGAGG s panTro4.chr19 59924316 24 + 63644993 ATTTTCCACTATGTTAAGACAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858076 24 + 60714840 ATTTTCCACTATGTTAAGACAAAT i ponAbe2.chr19 T 11733 C 0 s rheMac3.chr19 60657761 24 + 64156825 ATTTTCCACTATGTTAAGACAAAT i rheMac3.chr19 C 0 I 335 s macFas5.chr19 55798788 24 + 59248254 attttccactatgttaagacaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907104 24 + 51301725 ATTTTCCACTATGTTAAGACAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610891 24 + 50890351 attttccactatgttaagacaaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15065 24 + 138250 attttccactatgttaagacaagt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=49609.000000 s hg38.chr19_GL949748v2_alt 993476 21 + 1064304 AATTGACCCATTCTTACATTT s panTro4.chr19 59924340 21 + 63644993 AATTGACCCATTCTTACATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858100 21 + 60714840 AATTGACCCATTCTTACATTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658120 21 + 64156825 AATTGACCCATTCTTACATTT i rheMac3.chr19 I 335 C 0 s macFas5.chr19 55798812 21 + 59248254 aattgacccattctttttttt i macFas5.chr19 C 0 I 780 s papAnu2.chr19 47907128 21 + 51301725 AATTGACCCATTCTTACATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610915 21 + 50890351 aattgacccattcttacattt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15089 21 + 138250 aattgacccattattacattt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=205260.000000 s hg38.chr19_GL949748v2_alt 993497 117 + 1064304 GGAGGCTTCTCTAAGCAACTTTCCCATTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAACTTCTTGGTGCCATCCTTCTGTCTTTTCCcaa s panTro4.chr19 59924361 117 + 63644993 GGAGGCCTCTCTAAGCAACTTTCCCGTTCCCCCTTCACCCAAGCTGTGtgctcactagccctgattcacagccgtcgtcctggaacttctttgtgccatccttctgTCTTTTCCcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858121 117 + 60714840 GGAGGCTTCTCTAGGCAACTTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAACTTCTTTCTGCCATCCTTCTGTCTTTTCCcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658141 117 + 64156825 GGAGGTTTCTCTGAGCACACTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACCAGCCCTGATTCACAGCCGTCGTCCTGGAGCTTCTTTCTGCCATCCTTCTGTCTTTTcccaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47907149 117 + 51301725 GGAGGTTTCTCTGAGCACCCTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAGCTTCTTTCTGCCATCCTTCTGTCTTTTCCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610936 117 + 50890351 ggaggtttctctgagcaaccttcccgtttccctttcacccaagctgtttgctcactagccctgattcacagccgtcgtcctggagcttctttctgccatccttctgTCTTTTcccaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15110 117 + 138250 gaagttttctctaagcaaccttcccattcccgctgcacctaagctgtgtgctcactagcccggattcacagctgtcatcctgaagcttctgtctgccgtccttctgTCTTTTCCcaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55798833 780 + 59248254 I a score=11915.000000 s hg38.chr19_GL949748v2_alt 993614 5 + 1064304 gtgac s panTro4.chr19 59924478 5 + 63644993 gtgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858238 5 + 60714840 gtgac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658258 5 + 64156825 gtgac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55799613 5 + 59248254 gtgat i macFas5.chr19 I 780 C 0 s papAnu2.chr19 47907266 5 + 51301725 GTGac i papAnu2.chr19 C 0 I 322 s chlSab2.chr6 47611053 5 + 50890351 gtgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15227 5 + 138250 gtgat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=87402.000000 s hg38.chr19_GL949748v2_alt 993619 40 + 1064304 tcacctacctcaacctcccaaagtgccgggattacaggcg s panTro4.chr19 59924483 40 + 63644993 ccacctacctcaacctcccaaagtgctgggattacaggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858243 40 + 60714840 ccacctacctcaacctcccaaagtgctgggattacaggcg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658263 40 + 64156825 ccacccacctcaacctcccaaagtgctgggattacaggca i rheMac3.chr19 C 0 I 332 s macFas5.chr19 55799618 40 + 59248254 ccgcctgtctcagcctcccaaagtgctgggattacaggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907593 40 + 51301725 ccccccttctcggcctcccaaagtgctgggattacaggct i papAnu2.chr19 I 322 C 0 s chlSab2.chr6 47611058 40 + 50890351 ccacccacctcaacctcccaaagtgctgggattacaggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15232 40 + 138250 ccacccatctcaggctcctaaagtgctgggatgacaggcg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=67257.000000 s hg38.chr19_GL949748v2_alt 993659 33 + 1064304 tgagccactgtggccagccattcttttcctttt s panTro4.chr19 59924523 33 + 63644993 tgagccactgtggccagccattcttttcctttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858283 33 + 60714840 ttagccactgtggccagccattcttttcctttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658635 33 + 64156825 tgagccactgcgcccggccATTCTTTTCCTTTT i rheMac3.chr19 I 332 C 0 s macFas5.chr19 55799658 33 + 59248254 tgagccactgcgcccggccATTCTTTTCCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907633 33 + 51301725 tgagccactgcgcctggccattcttttcctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47611098 29 + 50890351 tgagccatcg----tggccattcttttcctttt i chlSab2.chr6 C 0 I 1988 s calJac3.chr22_GL285922_random 15272 33 + 138250 taagccaccattcccagccattcttttcctttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=1738065.000000 s hg38.chr19_GL949748v2_alt 993692 781 + 1064304 ttaaaacaatttttatcttctttattttaagtagagatg-gggtctcactatgttgcccaggctggtcttgaactcctgggctcaagcgatcctcctgccttggcctcccacagtgctaggattacagacatgatccactgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaacgctataataaatatagaactttaccttgagaagacctaacatttccttcagaaagtaaatatgagaggggtGGAGACGGTGCATTATC-----TTATTTTTATGAttttaaaaatgtatacagaattgtacatatttatggggtggacagcaatattgcagtacatgtatacaacgtgctatgatcaaatcagggtaattgacatattcatcCC----TGTAtt-ttttgagacaaagtcaggcttcgtcacccgagctagagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccattctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacctggctaatttttgtgttttt----ttgttttg--ttggtagagatgaggtttcaccatgttgcacaggctgatcttgTTTTCTAATGTGAAGGGAAGCGGGCAACGTGCTAGTTTTACACTAAGGAA----AATGAATGACATACCCAAACTGCCTGCAAGACCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACCGCAGTGGGAGATGGA------GTGAGGGTGAGAGTTTCTGGGG s panTro4.chr19 59924556 780 + 63644993 ttaaaacaatttttatcttctttattttaagtagagatg-gggtctcactgtgttgcccaggctggtctcgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgttaggattacagacatgatccactgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaatgctataataaatatagaactttaccttgagaagacctaacatttccttcagaaagtaaatatgagaggggtggagatggtgcattatC-----TTATttttattattttaaaaatttatacataattgtacatatttatggggtagacagcaatatttcaatacatgtatacaatgtgttatgatcaaatcagggtaattaacatattcatccc----tttatt-ttttgagacaaggtcaggctttgtcacccgagctagagcgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccattctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacctggctaatttttgt-ttttt----ttgttttg--ttggtagagatggggtttcaccatgttgcacaggctgatcttgTTTTCTAATGTGAAGGGAAGCGGGCAACGTGCTAGTTTTACACTAGGGAA----AATGAATGACACACCCAAACTGCCTGCAAGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACCGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858316 792 + 60714840 tttaaacaatttttatcttctttattttaagtagagatg-gggtctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccattgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaatgctataataaatatagaactttaccttgcgaagacctaacatttccttcagaaagtaaatatgagaggggtGGAGATGGTGCAttatcttattttatttttattattttaaaaatttatacatagttgtacatatttatggggtagacggcaatatttcaatacatgtatgcaatgtgttatgatcaaatcagggtaattaacatattcatcactttatttatt-tttcgagacaaagtcaggctttatcacccgggctagagtgcagtggtgtgatcttagctcactgcaacctctgccttccaggctcaagccgttctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacgtggctaatttttg--ttttt----ttgttttt--ttggtacagatggggtttcaccatgttgcacaggctgaccttgTTTTCTAATGTGAAGGGAAGCGGGTAACGTGCTAGTTTTATACTAAGGAAAATGAATGAATGACATACCCAAACTGCCTGCAAGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658668 771 + 64156825 TTAAAAAaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacacattagatggtcaagaaatgcct-aatgcgataataagtatagaactttactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtagagatggtgcattatCTTAttttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----ttTGtttttttgagacatggtcgggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55799691 771 + 59248254 TTAAAAAaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacacattagatggtcaagaaatgcct-aatgcgataataagtatagaactttactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtagagatggtgcattatCTTAttttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----ttTGtttttttgagacatggtcaggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGCCGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907666 772 + 51301725 ttaaaaaaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtcctgggattacagacatgatccactgcacccaacccagtGGTACAGTTTTACACGCATTAGATGGTCAAGAAATGCCT-AATGCGATAATAAGTATAGAACTTTACTTTGAGAAGACCTAACATTTCCTTCAGAAAGTAAATATGAGAGGGGTGGAGATGgtgcattatcttattttatttttattatttttaaaatgtatacataattgtacatatttatggggtaggcagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----tttgttattttgagacatggtcgggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaGGTGCTGGGAGAATAGGGatgcacccccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgATGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGCCGAAAGGGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47613115 771 + 50890351 TTAAAAAaatttttatcttc-----tttaagtagagctg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacgcattagatggtcaagaaatgcct-aatgtgataataagtatagaacttgactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtggagatggtgcattatCTTACtttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcagtacatgtgtacaatgggttttgatcaaatcagggtaatgagcatattcatcac----ttTGtttttttgagacatggtcgggctttgtcacccaggctggagtgcagtgatgtgatctcagctcactgcaacccctgcctcccaggctcaagccgttctcccacctctgcccactgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACAGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGCGAGTTTCTGGGG i chlSab2.chr6 I 1988 C 0 s calJac3.chr22_GL285922_random 15305 792 + 138250 taaaaaaactttttctcttctttatttttagtggagacgcgggtctcactatgctgcccaggctggtcttgaactcctcggcttaagtgatcctcctgccttgcccacccgaagtgctaggattacagacgtgatccactgtaccTCGTGCAgtggtatagttttacactcattagatgatcaagaaatgcctaaatgccataataaatgtagaactctactttgagaagacctaatatttccttcagaaagtaattatgagaggggtGGAGATGGTGCAttatcttattttattttt---attttaaaaatttatacataattgtacatatttatggggtaggtaacaatatttcaatacatatataccatgtgttatgatcagat-gggataattagcatattcatcac----tttatt-ttttgagataaggtcgggctctgtcactcaggctggagtgcagcggtgtgatctcagctcactgcaacctctgcctcccggactcaaacccttctcccacctcagcccccggagttgctaggactataggcatgcatcaccacacctggccgatttttg--ttttctgttttgttttgttgtggtagagatggggtttcaccgtgtcgcacaggctgatcttgTTTTCTAAAGTGCAGGAAAGCAATCAACAGGCTAGTTTTACACTAATGAA----AATGAACGACATACCCAAACTGCCCGCAAGGCCTGTTCTAAGAAATGAGA-GGAG-TGAGTTAGACTGCAGTGGAAGATGGAGTTGGGGTTGGGGTGAGTGTTTCTGGGG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=1384272.000000 s hg38.chr19_GL949748v2_alt 994473 578 + 1064304 AAA-ACCAGACA-AGAGCACAGAGGGCCAAAGGGAAGCACGGGAGGATTTTGCACAGAGGATGGAACAGAGTCAACCCTGAGAGCTGGGAACCTTAGAGATCCGTCTGGAGCCCATATTAGAGA-GGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCCCTcagacagagaggcagacagacagacagacaCTGGCCGAACGGCTCCCTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCGTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCACGCTCCACACACGC------CAGTCTTTGAGTCGCCTCCCATGCCATGATCCCTCCCTTGGATACGACCGTGCC-TGGGGTTC-AGCGGTCATGAACATAACCCGCGGCTGTGAACATCCTGTCGGCCTCCATCCTGACCCCCGTTTGATTTCCGGGTCAGCGGGAGGGGCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGCCCCTGTGCCGCAGGCGCTTCCTCCGGCTG s panTro4.chr19 59925336 580 + 63644993 AAA-ACCAGACA-AGAGCACAGAGGGCCAAAGGGAAGCACGGGAGGATTTTGCACAGAGGATGGAACAGAGTCAACCCTGAGAGCTGGGAACCTTAGAGATCCGTCTGGAGCCCATATTAGAGA-GGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCCCTcagacagagaggcagacagacagacagacaCTGGCTGAACGGCTCCCTGATGGAACACCAGGAGGAGGCAGCCTGGCC--TCGTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCATGTTCCACACACAC----CACAGTCTTTGAGTCGCCTCCCATGCCACGATCCGTCCCTTGGATACGACCGTGCC-TGGGGTGC-AGTGGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGACCCCCGTGTGATTTCCGGGTCTGCAGGAGGGGCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGCCCCTGTGCCGAAGGCGCTTCCTCCGGCTG i panTro4.chr19 C 0 I 681 s ponAbe2.chr19 56859108 570 + 60714840 AAA-ACCAAAC---GAGCACAGAGGGCCAAGGGGAAGCACGGGAGGGTTTTTCACAGAGGGTGGAACAGAGTCAACCCTGAGAGCTGGGAACGTTAGAGATCCGTCTGGAGCCCATATTAGAGAGGGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAAG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCGCTcagacagagagccagacagacagacagacaCTGGCTGAACGGCTCCTTGAGGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCACGCTCCACACACGC----CACAGTCTTTGAGTCACCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTAGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGACCCCCGTGTGATTTCTGGGTCT---------GCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60659439 566 + 64156825 GGACACGAGACA-AGAGCACAGACGGCCAAGGGGAAGCACGGGA-GGTCCTGCACAGAGGAGGGAACAGCGTCAGCCCTGAGAGCTGGGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGCTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTACCGGGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTCAGACAGAGAGC----CAGACAGACAGACACCGGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACAACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACGTCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAAGCGCTTCCTCCGGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55800462 566 + 59248254 GGACACGAGACA-AGAGCACAGACGGCCAAGGGGAAGCACGGGA-GGTTCTGCACAGAGGAGGGAACAGTGTCAGCCCTGAGAGCTGTGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGCTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTACCGGGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTcagacagagagc----cagacagacagacaCCGGCTGAACAGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACGTCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAAGCGCTTCCTCCGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47908438 569 + 51301725 GGACACGAGACA-AGAGCACAGACAGCCAAGGGGACTCACAGGAGGGTTCTGCACAGAGGAGGGAACA--GTCAGCCCTGAGAGCTGGGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGGTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTCCCGTGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTcagacagagagccagacagacagacagacaccgGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACAC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47613886 567 + 50890351 GGACACGAGACA-A-AGCACAGAGGGCCAAGGGGAAGCACGGGAGGGTTCTGCACAGAGGAGGGAACAGAGTCAGCCCTGAGAGCTGGGAATGTTAGAGGTCCGTCTGGAGCCCGTATTAGAGAAGGTTGAAGAAAGAAGCCAGTATG-TGGTCCAGCCAGGGCACCGTGTCCTCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGA-GGTGCCCTcagacagagagc----cagacagacagacaCTGGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACAGCCGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-GGTGGTCATGAACGTAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16097 544 + 138250 AAA-ACCAGAT---GAGCACAGAGGGCCAAGGGGAAGCATGGAG-GGTTCTGCGCAGAGGATGGAACAGAGTCGGCCGTGAGAGCTGGGAACGTTAGAGATTCATCTGGAGCCCGTATTACGGAAGGTTGAAGAAAGAGGCTGGTATG-TGGTCCAGCCAGGGTACCATGTGATCCACAGTGTGCAGG----GAG---G------------------AGACTCCTCCCATCCCAAATGGAGGGCGTCCTCGGACAGGGAGC--------CAGGCAGACACTAGCTGAACGGCTCCTTGATGGAGCACCAGGAGGAGGCAACATGGCC--TCCTTTCCAAG-CTGTAGCCTCAACCCTCCTGCTCCCATGCTCCACGTACAC----CACAGTGTTTGAGTTGTGTCCCATGCCATGATCCATCCCTTGGATATGACCATGCC-TGGGGTTC-ACTGGTTATGAGGAGAACCCGTGGCTGTGAACATCTGGTCGACCTCCATCCTGACTCCCGTGAGATTTCCGGGGCT---------GTGGGAGGGGTGGGAGTGGCCTCTGCATAGCCCTGACCCTGTGCCGCGGGCGCTTCCTCCGGCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20066459 551 - 122678785 AAA-AAAAAACACAAAATACAGGAGCCTACAGGGAACCATGGGAGTGTTTTGTACAGAGGATAGAACAGGGTCAGCTATGAGGCTTGGGGATA-CAGAGGTCAATCCATAACATGTATTAGGAAAGGCTG----AAGAGGTCAGTATGATGGTCCAGTTAGGTTGCCATAATATCCGTGATGTGCAAGCTATGAGTGAAAGGATGCTAGCATCCATTAGATACTCCCTATCCCAAATGAACAGAGTCCTTGGACAAAAAAC----CAAATAGACA---------TCAACAACTCCTTTATGGGGCATCACAGAGAAGACCCGTGACCCTCCTTCTCTACAGTCATAACCCCTATCTTCCTGCTCTTATGTTCCACACACTCCAAGCATGGTCTTTA---------------CACTCCCTACCTCATAGACACAACCAAGCCTTGAAGTTCTAATGGT-------GGGACCCATGGTTATGGCCATCTGGTCGACCCCCATCCTGATGACTGTGTGGTTTCTGGGTCT---------GTGGGAGGGGTGGGAGTGGCCTGTGGACAGCTCTGACCCGGAGCAACAGGGGTTTCTTTCTGCTG i canFam3.chr1 I 1307 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=515810.000000 s hg38.chr19_GL949748v2_alt 995051 234 + 1064304 TGCCAGTCCTCTGCCAGAAACCCCGCCAGGATTATTAGGATCACAGCCCCGAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGCAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTGA-AAGAGCCCACCTCCAGGACCCCCTCCAAGCCACAT-CTGGGCTTCTCA------------------GAGATCCTATTATTCTCTACTAGCTAGGGGATGCCGCTCACTTTCCTGGAGGGTC s ponAbe2.chr19 56859678 234 + 60714840 TGCCAGTCCTCTGCCAGAAACCCCGCCAGGAGTATTAGGATCACAGCCCCAAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGTGGACAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTAA-AAGAGCCCACCTCCAGGATCCCCTCCAAGCCACAT-CTGGGCTTCTGA------------------GAGATCCTATTATTCTCTACTAGCTAGGGGATGCCACTCGCTTTCCTGCAGGGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660005 233 + 64156825 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGTGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGG-AAAAGCCCACCTCCAGGACCCTCTCCAAGCCACATCCTGGGCTTCTCA------------------GAGAGCCTGTTATTCTCCACTAGCT--GGGGTGCCATTCTCTTTCCTGGAGGGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801028 233 + 59248254 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGA-AAAAGCCCACCTCCAGGACCCTCTCCAAGCCACATCCTGGGCTTCTCA------------------GAGAGCCTGTTATTCTCCACTAGCT--GGGGTGCCATTCTCTTTCCTGGAGGGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909007 233 + 51301725 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTCA-AAAAGCCCACCTCCAGGACGTTCTCCGAGCCACATCCTGGGCTTCTCA------------------GAGATCCTGTTATTCTCCACTAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47614453 233 + 50890351 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCGCAGCCCCGAGGCATATCCGGACCAGGTTGCCCATGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGA-AAAAGCCCACCTCCAGGACCCTCTCCGAGCCACATCCTGGGCTTCTCA------------------GAGATCCTGTTGTCCTCTACTAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16641 233 + 138250 TGCCAGTCCTCTGCCAGAAATCCCGCCAGGAGTATTAGGATCACAGCTCCGAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGAAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTGA-AGAAGCCCATCTCCAGGACCCCCTCCAAGCCACATCTTGGGCTTCTCA------------------GAGATCCTATTATCCTCTACCAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067010 252 - 122678785 TGCCAATCTTCTGCCAGAATTCCCACCAGGAGTATTAGAATCACAGCTCCAAGGCATATCCGGACCAGATTGCCCTTGGTGTAGTGCTGGTGAGCAAGACCTGGAAGAATGAAGAGAGACAGGAGCAGGTGACAAAAGCCTATCTCCAGGACCCACTTCAAGGCGCATCTTGAGCTTCTCATAGCCATATCTCTCATTTGAGGTCCTATTATTCTCTGCTATCT--AGAATGCCAGTCTCCTTCCTAGAGAGTT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e panTro4.chr19 59925916 681 + 63644993 I a score=1342667.000000 s hg38.chr19_GL949748v2_alt 995285 555 + 1064304 CCTCCCTTCCCGAGTAGGGGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCCTGTGCTCTCACAGGGCTCTGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGCATTGCAAAAGAGAGGACAGTTATAAGGGGTGGG-GAAGAGATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATACGCTGATATTCTGCCTTT-------ACTCTACACACTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGCGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGAGAAGGAAGGGGGTCTGGAGAGGATGACTTACTCACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGTCACTGTGCCTACTCCGAACACACACACACATGGGGAGGCACAATTCCACAGCATTTAAGAAAAGCAT s panTro4.chr19 59926597 546 + 63644993 CCTCCCTTCC-GAATAGGAGTCGGGGCCAGATGACCCCA-TCCTCTAAGTAGCAC---TCCCCTCTGTGTTCTCACAGGGCTATGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGCATTGCAAAAGAGAGGACAGTTATAAGGGGTGGG-GAAGAGATGGAATTTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATATGCTGATATTCTGCCTTT-------ACTCTACACGCTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGAGAAGGAAGGGGGTCTGGAGAGGATGACTTACTCACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGTCACTGTGCCTACTCCGAACACACACAC----GGGGAGGCACAATTCCACAGCATTTAAGAAGAGCAT i panTro4.chr19 I 681 C 0 s ponAbe2.chr19 56859912 547 + 60714840 CCTCCCCTCCCAAGTAGGGGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCATGTGCTCTCACAGGGCTCTGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGGGTTGCAAAAGAGAAGACAGTTATAAGGGGTGGG-GAAGAGATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATACGCTGATATTCTGCCTTT-------GCTCTACACACTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGGGAAGGAAGGGGGTCTGGAGAGGATGACTT----ACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGCCACTGTTCCTACTCCTAACACACACAT----GGGGAGGCACAATTCcacagtatttaagaagagcat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660238 557 + 64156825 CGTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGCCCCCAGTTCTCTAAGTAGCATCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCCGCCTCCTTGCCTGATGTATTGCAAAAGGGAAGACAGTTATAAGGGGTGGG-GAAGAGATGGCATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCGCCTGGTCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTCGGGTGAAGAGATGGGTGAGAAGGAAGGGGGTCTGGAGAGGACGACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCAGTGATACTCCTAGAAGTCTCTGGGAA-CAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTTTCCC-ATCACCGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGCGCGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801261 557 + 59248254 CGTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGCCCCCAGTTCTCTAAGTAGCATCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCCGCCTCCTTACCTGATGTATTGCAAAAGGGAAGACAGTTATAAGGGGTGGG-GAAGACATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCGCCTGGTCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTCGGGTGAAGAGATGGGTGAGAAGGAAGGGGGTCTGGAGAGGACGACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTTTCCC-ATCACCGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGCGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909240 556 + 51301725 CGTCCCCTCCTGAGGAGGTGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCATCTCTCCCTCGTGTGCTGTCACAGGACTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCTGCCTCCTTATCTGATGTATTGCAAAAGGGAAGACAGTTATAA-GGGTGGG-GAAGAGATggaatctctctttctctgaccctttttaaaatctcaaccTTCCCGCCTGATCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTTGGGTGAATAGATGGGTGAGAAGGAAGGGGGTCTGGAGGGGACAACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCaaaaaaaGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCC-GTCACTGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGAgcat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47614686 554 + 50890351 CCTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCGTCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCACCCCAGACAC----CGATGCTGCCTCCTTATCTGATGTATTGCAAAAGGGAAGACAGTTATAA-GGGTGGG-GAAGAGATGGAA--TCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCTCCTGATTTTAATGTGCAATTCTGAACCCCATACGCTGATCTTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTTGGGTG--GAGATGGGTGAGAAAGAAGGGGGTCTGGAGAGGACAACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTAGCGGTGATACTCCTAGAAGTCTCTGGGAACCAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCCTGTCACTGTGCCTACTCCGAACACACACAC--ATGGGGAGGTCGAATTCCACAGCATTTAAGAAGAGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16874 526 + 138250 CCCCCACTCCCCAGTAGGAGTCAGGGCAAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCATGTGCCGTCACAGGGCTCTGAGAC----AACCCCTTCCCAGACAC------ATGCTGCCTTGTTAGCCAATGCGTTGCAAAAGAGAAGACAGTTATAAGGGGCGGG-GAAGAGATGGAA--TCTCTTTCTCTGACCCTTCAGAAAATCTCAACCTTCCCAGCTGAACTTAATGCCCAATTCTGAACCCCATACACTGATATTCCGCCTTC-------TCTCTACACACTGGAACCCAAGATCTCAGAGCTGCAGTTTCTGTATAGAGAAAGGAGTTGGCTTT------------GGGTGAGAAGGGAGAGGGTCTGGAGAGGATGACTC----ACCAGCTGGAGAGCCTGACTCCTTTGGACTGGTGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCC-ATCACTGTCCCTACCCTTAACACACACAC---TTGGGAGGCAGAATTCCTTATTAC------AGAGCAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067262 526 - 122678785 CCTCCCCTCCTCACCAAGGATCAGGGCTAGATAAGCCAAATTCTCTAAATATCACTTC-----CACACACCCTCATGGGCCCCTGATGC----AACCCCTCCACACACACACACAGACACTACCTGGTTATTTGGCTAATTGCATTA-AAAAAACTGTCATAAAGGGCAGATAAAGAGATGGAATTTCTCTTTCCCTGATCCTTTAGAAATTTTCAACCTCCCCACCTGATCTTATTGCCCAATTCTGAGTTCCAAGGGCTTATATTTACCCTCCCCTTAATATTTTATATACCAGGACCCAAAATC--AGAGCTATAGCCTCTGCACAG-----------------------------GGGTGAGAATGAAGAGGGTCCAGAGAGGACCACTTACTCACCAGTTGGAGAGTCTGACCCCTTTGGAGAGACAGTGATAGTCCTAGAAGGCACTGGGAA-TCAAAAAGGA---AAGTATAAAGGAGTAAGACCATCTCCTGTAACCCTGTTCCTGC-CCCATCCCAAACACATGCCC---TTGTGAGGCAGAATCCCATGAC-TATAAGaggagcat i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=274203.000000 s hg38.chr19_GL949748v2_alt 995840 123 + 1064304 Gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggtaggaggctggcttgagtccaggagttcaagaccaacctgagcaacatag-aaaaaccctatctctac--aaa s panTro4.chr19 59927143 125 + 63644993 Gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggcaggaggctggcttgagtccaggagttcaagaccaacctgagcaacaaag-aaaaaccctatctctacaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860459 123 + 60714840 gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggcaggaggctggtttgagtccaggagttcaagaccaacctgagcaacgtgg-aaaaaccctatctctac--aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660795 122 + 64156825 Gggccgggcacggtgcctcacgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcattgaagacctacctcagcaacatgg-aaaaaccctatctctac---aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801818 122 + 59248254 Gggccgggcacggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcattgaagacctgcctcagcaacatgg-aaaaaccctatctctac---aa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909796 122 + 51301725 gggccgggcatggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggctTGAGTCCAGGCATTGAAGACCCACCtcagcaacatgg-aaaaaccctatctctac---aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615240 123 + 50890351 Gggccgggcatggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcgttgaagacccacctgagcaacatggaaaaaaccctatctctac---aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17400 122 + 138250 Gggctgggcacagtggctcacccctgtaatcccagcactttgggaggctgaggcaggaggatggcttgagtccaagagttcaagaccagcctaagcaacttgg-aaaaatcctatctctac---aa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20067788 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=24892.000000 s hg38.chr19_GL949748v2_alt 995963 8 + 1064304 aaaataca s panTro4.chr19 59927268 8 + 63644993 aaaataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860582 8 + 60714840 aaaataca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660917 8 + 64156825 aaaataca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801940 8 + 59248254 aaaataca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909918 8 + 51301725 aaaataca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615363 8 + 50890351 aaaataca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17522 8 + 138250 aaaataca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067788 8 - 122678785 aaactaca i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=416263.000000 s hg38.chr19_GL949748v2_alt 995971 179 + 1064304 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtggaggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgtaccactgcactctagcctgggaaacagagcgagaccctgtcc----------aaa-------------------aaaaaaaaagcaagaactgta s panTro4.chr19 59927276 182 + 63644993 gaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgtaccactgcactctagcctgggaaacagagcgagaccctgtcc-------aaaaaa-------------------aaaaaaaaagcaagaactata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860590 201 + 60714840 aaaattagccaggcgtggtggcatgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattataccactgcactctagcctgggaaacagagcaagaccttgtcc-------aaaaaaaaaaaaaaccaacaacaacaaaaaaaaaacaagaacaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660925 178 + 64156825 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcgctctagcctgggaaacagagcaagaccctgtcc-----------aa-------------------aaaaaaaaGgcgtgaactata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801948 179 + 59248254 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgtcc----------aaa-------------------aaaaaaaaagcgtgaactata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909926 180 + 51301725 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgccc---------aaaa-------------------aaaaaaaaagcatgaactaTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615371 189 + 50890351 aaaattagccaggcgtggtggcacttgccagtaatcctggctattcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgtccaagaaaaaaaaaa-------------------aaaaaaaaaaaatgaactata i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17530 179 + 138250 aaaattagcctggcatgatgacacatgcctataatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgagaggttgaggctgcagtgagccaggattgctccactgcactccagcctgggaaccagagcaagaccgtatct----------caa-------------------aaaaaaaaagcatgaactaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20067796 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=497685.000000 s hg38.chr19_GL949748v2_alt 996150 206 + 1064304 gagtcaggctgtcctccagatttgaaccccaactctatcacctattagatgtcagttatctggcaagtgactcagcatctgtgagccag-ttcccc----atgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaagataataataatggtagaaatataaagcaccgtgcttgacat---atgagcacctcatacgtg s panTro4.chr19 59927458 206 + 63644993 gagtcaggctgtcctccagatttgaactccaactctatcacctattagatgtcagttttctggcaagtgactccgcatctgtgagccag-ttcccc----atgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaagataataataatggtagaaatataaagcacagtgcttgacat---atgagcacctcatacgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860791 206 + 60714840 gagtcaggctgtcct-cagatttgaaccccaactctatcacctattagatgtcagttatctggcaagtgactcagcatctgtgagccagtttcctc----gtgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaaaataataataatggtagaaatataaagcacagtgcttgacat---atgagcatctcatacgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60661103 207 + 64156825 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagctatctggcaagtgactcagcatctgtgagccggtttcccc----atgtgtccaataaaattaacgagatccctcataggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acgggcacctcatacgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802127 207 + 59248254 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagttatctggcaagtgactcagcatctgtaagccggtttcccc----atgtgtccaataaaattaacgagatccctcataggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acgggcacctcatacgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910106 207 + 51301725 GAGTCAGGCTGTCCTCCAGATTTGAACCCCAACTCTATCACCTGTTAGATGTGAGTTATCTGGCAAGTGACTCAGCATCTGTGAACCGGTTTCCCC----ATGTGTCCAATAAAATTAACGAGATCCCTCATAGGTTGATGTGAAAGTCAAGATAATAATAACGGTAGTAATATAAAGCACGGTGCTTGACAT---ACGGGCACCTCATACGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615560 205 + 50890351 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagctatctggcaagtgactcagcatctgtgaactggtttcccc----acatgtccagtaaaattaacgagatccct--taggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acaagcacctcatacgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17709 181 + 138250 gaatcagcctgtc---cagatttgacacccaaggctatcactta---------------------------tcagcatctgtgaagcagttttccctcctatgtgtccagtaaaattaatgatatcccttataggttggtgtgaaagtcaagatgataat---ggcagtaaaacaaagcacgctgcttgacatataatgagcacctcatacatg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067796 206 - 122678785 gagttggg----catctagatttgaaccccagatctatccctaattagatgtggggcctctaccaaatgacttaacatctatgagccagttttccc----atctgtcaatgaaaataattataatacatcacaggttaatgtgaaatttaaatcaataacaataataacagcacaaggcacagttcttgacatatgataagcatcccacacgtg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=2338.000000 s hg38.chr19_GL949748v2_alt 996356 6 + 1064304 ccagc-----t s panTro4.chr19 59927664 11 + 63644993 ccagctttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860997 6 + 60714840 ccagc-----t i ponAbe2.chr19 C 0 I 608 s calJac3.chr22_GL285922_random 17890 6 + 138250 tcagc-----t i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068002 6 - 122678785 gcagc-----t i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=180.000000 s hg38.chr19_GL949748v2_alt 996362 1 + 1064304 t s panTro4.chr19 59927675 1 + 63644993 t i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 17896 1 + 138250 c i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068008 1 - 122678785 T i canFam3.chr1 C 0 I 29 e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=2851.000000 s hg38.chr19_GL949748v2_alt 996363 22 + 1064304 tttttttttt-----ttttttgagaca s panTro4.chr19 59927676 22 + 63644993 tttttttttt-----ttttttgagaca i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 17897 27 + 138250 tctattcctcaagcatctcctgagaca i calJac3.chr22_GL285922_random C 0 I 1074 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=25501.000000 s hg38.chr19_GL949748v2_alt 996385 275 + 1064304 gagtctggctctgtctcccaggctggagtgcagtggcccgatgtcggctcacttcaacctccgcctcctgggctcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccagctaagttttgtatttttagtagagatgggatttcaccatattggccaggttggttttgaactcctgaccttgtgatccgcccgcctaggcctcccaaagtgctgggattacaggcgtgagccactgcacccggccT s panTro4.chr19 59927698 275 + 63644993 gagtctggctctgtctcccaggctggagtgcagtggcccgatgtcggctcacttcaacctccgcctcctgggctcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccagctaagttttgtatttttagtagagatgggatttcaccatattggccaggttggtctcgaactcctgaccttgtgatctgcccacctaggcctcccaaagtgctgggattacaggcgtgagccactgagcccagccT i panTro4.chr19 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=23477.000000 s hg38.chr19_GL949748v2_alt 996660 18 + 1064304 CCAGCTCTCttattcctc s panTro4.chr19 59927973 18 + 63644993 CCAGCTCTCTTATTCCTC i panTro4.chr19 C 0 I 562 s rheMac3.chr19 60661310 18 + 64156825 ccagttctcttatttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802334 18 + 59248254 ccagttctcttattTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910313 18 + 51301725 CCAGCTCTCTTATTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615765 18 + 50890351 ccagttctcttattTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=500135.000000 s hg38.chr19_GL949748v2_alt 996678 429 + 1064304 aagtatctcctgagactcgccaggtactcagccatgtgctgggccatgggaacccaaatattaataagacattgtcaggccaggcatgacactggctgaatgcctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaaatag-ctgggcatggtggcacacacctgtagtcccagctactcaggagccggagattgcagtgagctgagatcgcagagtgagccgaaatcacagatcacagagtgagcagagtgagactccgtctcaaaaacaacaacaaaaaacaaaaaaaccataagacattgtccatctgcggttcccagactattgcaggagaccaaaaagtaaagcgatt s panTro4.chr19 59928553 429 + 63644993 AAGTATCTCCTGAGACTCGCCAGGTACTCAACCATGGGGTGAGCCATGGGTACCCAAATATTAATAAGACATTGTCAggccaggcatgacactggctgaatgcctgtaatcccagcactttgggaggtcgaggtgggcggatcacctgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattag-ctgggcatggtggcacacacctgtagtcccagctactcaggagccggagattgcagtgagctgagatcgcagagtgagccgaaatcacagatcacagagtgagcagagtgagactccgtctcaaaaacaacaacaaaagacaaaaaaaCCataagacattgtccatctgcggttcccagactattgcaggagaccaaaaagtaaagtgatt i panTro4.chr19 I 562 C 0 s rheMac3.chr19 60661328 403 + 64156825 gagtttctcctgagactggccaggtactcagccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaagaaatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcgtggtgacgggcgcctgcagtcccagctactcaggagtcggaggttgc------------------agtgagccgaagtcacagatcccagagtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagacattgtccatctgcggttctcagactattggaggagacagagaagtaaagcgatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802352 403 + 59248254 GAGTTTCTCCTGAGACTGGCCAGGTACTCAGccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcgtggtgacgggcgcctgcagtcccagctactcaggagtcggaggttgc------------------agtgagccgaagtcacagatcccagagtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagacattgtccatctgcggttctcagactattggaggagacagagaagtaaagcgatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910331 420 + 51301725 GAGTTTCTCCTGAGACTTGCCAGGTACTCAGCCATGTGCTGGGCCATGGGAACCCACATATTAATAAGACATtgtcaggccaggcatggcacTGGctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatgcagaccatcctggccaacaaggtgaaaccccatctcttctaaaaatacgaaaattagcctgagcgtggtggcgcacgcctgtagtcccagctactcaggagtgggaggttgcagtgagccgagatcgcagagTGAGCCGAAGTCACAGATCCCAGAGtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagaCATTGTCCATCTGCGGTTACGAGATTATTGGAGGAGAC--AGAagtaaattgatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615783 413 + 50890351 GAGTTTCCCCTGAGACTTGCCGGGTAATCAGccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatggagaccatcttggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcatggtggcgcacgcctgtagtcccagctactcaggagtcggaggttgcagtgagccgagatcgcagagtgagccgaagtcacagatcctagagtgagcagagtgagactccgtctcaa--------------aacaacaaaaacataagacattgtccatctgcggttcccagaccattggaggagac--agaagtaaagcaatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=96876.000000 s hg38.chr19_GL949748v2_alt 997107 98 + 1064304 -tttttttttttt---taatacggagtctcactctgttgcccaggctggagtgctgtggtgtgatctcaggtcactgcaacctccaactcgtgagttcaagc s panTro4.chr19 59928982 96 + 63644993 -tttttttttaa-----aatacggagtctcactctgttgcccaggctggagtgctgtggtgtgatctcaagtcactgcaacctccaactcctgggttcaagc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60661731 86 + 64156825 -tttttttttttc-----atatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802755 87 + 59248254 -tttttttttttt----aatatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910751 87 + 51301725 -tttatttttttt----aatatggagtttcagtatgttgcccaggctgga----------gtgatctcagctcactgcaatctccaactcctgggttcaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616196 89 + 50890351 -tttttttttttt--taaatatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 18998 69 + 138250 tttttgtatttttagtagagacagggtttcaccatgttgaccaggatcgt-------------------------------ctcgatctcttgaccttgt-- i calJac3.chr22_GL285922_random I 1074 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=310586.000000 s hg38.chr19_GL949748v2_alt 997205 146 + 1064304 gattctcctgcctcagcctcccaagtagctggaattacaggtgcccaccaccacgcccggcta---------------------------atttttgtattttcagtagagacggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatccactcaccttggc s panTro4.chr19 59929078 146 + 63644993 aattctcctgcctcagcctcccaagtagctggaattacaggtgcccaccaccacgcccggcta---------------------------atttttgtattttcagtagagatggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatacactcaccttggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56861611 146 + 60714840 gattctcttgcgtcagcctcccaagtagcgggaattacaggtgcccgccaccacgcctggcta---------------------------atttttgtattttcagtagagacggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatccacccaccttggc i ponAbe2.chr19 I 608 C 0 s rheMac3.chr19 60661817 146 + 64156825 gattctcctgcctcagccttgcaagtagccggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtatttttagtagagacagggtttcaccctgttggccacactggt------cccctgacctcaggtgatccacccgccttggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802842 146 + 59248254 gattctcctgcctcagccttgcaagtagccggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtattttcagtagagacagggtttcaccctgttggccacactggt------cccctgacctcaggtgatccacccgccttggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910838 146 + 51301725 gattctcctgcctcagccttgcaagtagctggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtattttcagtagagacagggtttcaccatgttgcccaggctggt------ctcccgacctcaggtgatccacccgccttggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616285 146 + 50890351 gattctcctgcctcagccttgcaagtagctggaattacagttgcccgccaccacacccggcta---------------------------atttttgtattttcagtagagacagggtttcaccatgttggccagactggt------cccctgacctcaggtgatctacccgccttggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19067 179 + 138250 aatccaccctccttggcctcccaaagtgctgggattataggcgtgagccactgcgcccggccAATGCCCAATTCTTAACCCCCAGTAGAGatttttgtatttttagtaaagaataggtttcaccatgctggccaggctggtctcgaactccagacctcaggtgatccgcccaccttggc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=857856.000000 s hg38.chr19_GL949748v2_alt 997351 344 + 1064304 ctcccaaagtgctgggattacagacaaagcgataattttaatatactgtaaaaattgctgtaataggcagcccacaagacactgagcgagagcagaggaaaccat-cgatccagcctggacggtcaaggctttcttgaggaattgatgccatggggaaatggaagaaaaggcagagtgagtgggttgggtgcagagtcaggagaggttaggaagcctccaggagagCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGCGTGGAAGGTATGCAGACAAAATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCACAGAATAGCAAGCTGAGGAAT s panTro4.chr19 59929224 344 + 63644993 ctcctaaagtgctgggattacagacaaagtgataattttaatacactgtgaaaattgctgtaataggcagcccacaagacactgagcgagagcagaggaaaccat-cgatccagcctggacggtcaaggctttcttgaggaattgatgccatggggaaatggaagaaaaggcagagcgagtgggttgggtgcagagtcaggagaggttaggaagcctccagaagagCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGCGTGGAAGGTATGCAGACAAAATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCACAGAATAGCAAGCTGAGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56861757 344 + 60714840 ctcccaaagtgctgggattacagacAAAGCGACAATTTTAATATACTGTGAAAATTGCTGTAATAGGCAGCCCACAAGACactgagcgagagcagaggaaaccac-cgatccagcctggacagacaaggctttcttgaggaattgacTCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTGGCTTGGGTGCAGAGTCAGGAGAGGTTAGGAAGCCTCCAGAAGAGCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGTGTGGAAGGTATGCAGACAAGATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCCCAGAACAGCAAGCTGAGGAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60661963 343 + 64156825 ctcccaaagtgcggggacgacag-caaagcgataattttaatacactgtgaaaattgctgtaatagacagcccacaagacactgagcaagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgaGGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAACCTCCCGAAGAGATTCAAGTGACTGTGCGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTACGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTACGCTCATGGAATAGCAAGCTGACGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802988 343 + 59248254 ctcccaaagtgcggggacgacag-caaagcgataattttaatacactgtgaaaattgctgtaatagacagcccacaagacactgagcgagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgaGGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAACCTCCCGAAGAGATTCAAGTGACTGTGCGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTACGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTACGCTCATGGAATAGCAAGCTGACGAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910984 343 + 51301725 ctcccaaagtgtggggatgaCAG-CAAAGCGACAATTTTAATACACTGTGAAAATTGCTGTAATAGACAGCCCACAAGACACTGAGCGAGAGCAGAGGAAGCCAC-GAATCAAACCTGGACGGCCAAGGCTTTCATGAGGAATTGAGGCCATggggaaatggaagaaaaggcaGAGCAAGTAGATTGGATGCAGAGTCAGGAAAGGTTAGGAAGCCTCCCGAAGAGATTAAAGTGACCGTGTGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTGTGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTAAGCTCATGGAATAGCAAGCTGACGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616431 343 + 50890351 ctcccaaagtgcggggacgacag-caaagcgataattttaatatactgtgaacattgctgtaatagacagcccacaagacactgagcgagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgacGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAGCCTCCAGAAGAGATTCAAGTGACTGTGTGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTATGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTAAGCTCATGCAATAGCAAGCTGACAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19246 345 + 138250 ctcccaaagtgctgggatgacaggcAAAGCGATCCTTGTAATATACTGTGAAATTTGCTGTAAGAGTCAGCCCACAGGACACTGAGCAAGAGCAGAGAAAACCAC-CAATGCAGCCTGGATGGTCAAGGTTTTCTTGAGGAATCGGTGCCATGGGGAAATGGAAGGAAAGGAAAAGCAAGTGGCTTGGGTGCAGAGGCAGGAGAGGATAGGGAGCCTCCAGAAGAGCTTCAGGTGCCTGTGTGTGGCTGAGAACAGCACGGGGACTGCATGGAAGGTATGCAGACAGGATTGGA------------GGGATCAGCAGCGGCTGA------------GTGTCTAAGCTCATGGAACAGCAAGCTGAACAAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068038 338 - 122678785 CTTACCAGGTGCTCAGCCAGCAG-ACAGGTGCATATTTTAATATACTGTGTAAATTGACATAACAGGCAGTCCATAGGA-------------CAGAGGAAGCTATACAACCCAGT---GTCATAAAAGGCTTTCCTGAGAGACTGAGGCCATGAGGAAATAGAAGGAAAAACAGAGCAAGTGGCTTGGATGCAGAATCAGGAGAAGATGCCAAGGATCCAGGAGAGCTTCATCTGACTCTGTGTGGCTAAGATTTGCATGAGGA-------------ATGAAGACAAGA--GGATCAACGGAGTCTGGGATGAGCAGTGGCTGATCTAAGGGCATTGGGCCTAAAAGCATTGAATATCAAGCTAAGAAAT i canFam3.chr1 I 29 I 1070 e nomLeu3.chr10 103362684 100 - 106955855 I a score=142241.000000 s hg38.chr19_GL949748v2_alt 997695 62 + 1064304 TGGAACTGCATCCTGAGGGTGATTGGGAGGTTCCGAACTGAAGATAGGGAAGGCTTCCATCA s panTro4.chr19 59929568 62 + 63644993 TGGAACTGCATCCTGAGGGTGATTGGGAGGTTCCGAACTGAAGATAGGGAAGGCTTCCATCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862101 62 + 60714840 TGGAACTGCATCCGGAGGGTGATTGGGAGGTTCTGAACTGAAGATAGGGAAGGCTCCCATCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662306 62 + 64156825 TGGAACTGCATCCTGAGGGTGACTGGGAGGTTCTGAACTGAAGATAGAGAAGGACCCCATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803331 62 + 59248254 TGGAACTGCATCCTGAGGGTGACTGGGAGGTTCTGAACTGAAGATAGAGAAGGACCCCATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911327 62 + 51301725 TGGAACTGCATCCTGAGGGTGACTGGGAAGTTCTGAACTAAAGATAGGGAAGGACCCCATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616774 62 + 50890351 TAGAACTGCATCCTGAGGGTGATTGGGAGGTTCTGAACTAAAGATAGGGAAGGACACCATCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19591 62 + 138250 TGGAACTGCATCCTGAGGGTGACCGGGAGGTCCTGAAGCGAAGATAGGGAAGGAGCCCACCA i calJac3.chr22_GL285922_random C 0 I 6 e canFam3.chr1 20068376 1070 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=522374.000000 s hg38.chr19_GL949748v2_alt 997757 310 + 1064304 C------AGAACTCCCTGGGATATgccgggcgcggtggctcatgcctccaatcccagcactttgggaggccgagacaggtggatcatgaggtcaggagttcaagaccagccttcccaagatgctgaaaccccgtctctactaaaa-tacaaaaattagccaggtgtggtggcatgcacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa s panTro4.chr19 59929630 295 + 63644993 C------AGAACTCCCTGGGATATgccgggcgcggtggctcatgcctgcaatcccagcactttgggaggccgag----------------gtcaggagttcaagaccagcctgcccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggcacgcacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862163 311 + 60714840 C------AGAACTGCCTGGGATATgccgggcgcagtggctcatgcctgcaatctcagcactttgggaggccgagacgggtggatcacgaggtcaggagttcaagaccagcctgcccaagatgctgaaaccccgtctctactaaaaatacaaaaattatccaggcgtggtggcacgcacctacaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggcggcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662368 315 + 64156825 CAGGGTTAGAACTCTCTGGGATATgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcccaaggtcaggagttcaacaccagcctggccaagatgctgaaaccccgtctataattaaaaaacaaaaattagccaggcgtggtggcgggcacctgtaatctcagctactg-ggaggctggggcaggagaatcgcttgaacccgggcagcagaggtaccagcgagccgagatctcgcccctgcactacatcctgggtgacagagcaagactctacctctaaaaaataaaaa- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803393 315 + 59248254 CAGGGTTAGAACTCTCTGGGATATgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcccaaggtcaggagttcaagaccagcctggccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcgggcacctgtaatctcagctactt-ggaggctggggcaggagaattgcttgaacccgggcagcagaggttacagcgagccgagatctcgcccctgcactacagcctgggtgacagagcaagactctacctctaaaaaataaaaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911389 315 + 51301725 CAGGGTTAGAACTCTCTGAGatatgccgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaagacgggtggattccaaggtcaggagttcaagaccagcctggccaagatgccgaaaccccgtctctactaaaaatacaaaaattagccaggcatggtggcacgcacctgtaatctcagctactt-ggaggctggggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccaagatctcgccactgcactacagcctgggtgacagagcaagacaccacctctaaaaaataaaaa- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616836 315 + 50890351 CAGGGTTAGAACCCTCTGGGATATgccggacgcagtggctcacgcctgtaatcccagcactttgggaggccgagatgggtggatcccaaggtcaggagttcaagaccagcctggccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcgcgcacctgtaatctcagctactt-ggagtctgaggcaggagaatcgcttgaacccgggcagcagaggttacagcgagccgagatctcgccactgcactacagcctgggtgacagagcaagactccacctcaaaaaaataaaaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068376 1070 - 122678785 I e calJac3.chr22_GL285922_random 19653 6 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=478413.000000 s hg38.chr19_GL949748v2_alt 998067 212 + 1064304 ta------gaaCTACGTGGGATCAGGTGCCTCAT-GAAAGCCAGAGTCATGTGGGCCCAGTGGAAGTATCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGAGA-TTTTCCAGGACAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTGCTGTGTCCAGGTGCCTACAGTC s panTro4.chr19 59929925 218 + 63644993 taaaaatagaaCTATGTGGGATCAGGTGCCTCAT-GAAAGTCAGAGTCATGTGGGCCCAGTGGAGGTATCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGAGA-TTTTCCAGGACAGGCAAGGGGAAAGAGAC--------TGAGGAAAGTGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTGCTATGTCCAGGCGCCTACAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862474 218 + 60714840 taaaaatagaaCTATCTGGGATCAGGTGCCTCAT-GAAAGCCAGAGTCATGTGGGCCCAGTGGAGGTAGCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGCGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTACTATGTCCAGGCGCCTACAGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662683 207 + 64156825 ------tagaaCTCTC--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATACCTCACC---TATTAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803708 207 + 59248254 ------tagaaCTCTC--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGACCCAATGGAGATACCTCACC---TATTAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACAGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911704 210 + 51301725 ------tagaactctc--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATACCTCACCTGTTATCAGGGAATCCGTGAAGGCGT---TTAGTCTAGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47617151 212 + 50890351 ------TAGTACTCTCTGGGATCAGGTGCCTCGT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATGCCTAACCTATTATCAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAGAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGGTGTACTAGGTCCAGGCGCCTACAGTC i chlSab2.chr6 C 0 I 92 s calJac3.chr22_GL285922_random 19659 218 + 138250 ------TAGAACCCTCTGCGATCAGGTGCCTCAT-GAAAGCCGGAGTCACGTGGGCCCAGCGGAGATAGCTAGCCTGTTATCAGGGAATCTGTGAAGGTGTTTATTAGTCTGGAAGGAAATGAC-A-CTTCCCAGGAAAAGCAAGGGGGAAGAAAC-TGCAGTGTGAGGAAGGCGTATCCGCAGAGCACTGGAGTGGTTAGA---TGTACGGTGTCCAGGCACCTACCCTC i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20069446 203 - 122678785 ------TAGAATTTGCTGGCATCAGGAATCGAGCAGAAAGCTAGAGTCAGGTGGACCCAGTCGAGATATCAGAACTATCCTCAAGGGATCTGC-AAGGTTT---TCTGTCTTGAGGAAAATTGATACTTTTCTAAGAAAAGGAAGGGGAAAGAGAGCTACAACATGAGGGAAGTATGT-TGCACAGAACTGCAGGAGTAAGAGGAAGCAGTGAG----------------- i canFam3.chr1 I 1070 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=8022.000000 s hg38.chr19_GL949748v2_alt 998279 4 + 1064304 TGTG s panTro4.chr19 59930143 4 + 63644993 TGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862692 4 + 60714840 TGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662890 4 + 64156825 TGTG i rheMac3.chr19 C 0 I 30 s macFas5.chr19 55803915 4 + 59248254 TGTG i macFas5.chr19 C 0 I 30 s papAnu2.chr19 47911914 4 + 51301725 TGTG i papAnu2.chr19 C 0 I 30 s calJac3.chr22_GL285922_random 19877 4 + 138250 TGTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20069649 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617363 92 + 50890351 I a score=332687.000000 s hg38.chr19_GL949748v2_alt 998283 157 + 1064304 TGCGTCC-GAGCATGGGCTCTACCTGGACACAGTGAGGAGC-GAGATTAAATACCTGG-ATCACAGCCGAGTCCAAA-GCCTAGGACT----------------TCATCCTGGGAGCAGTGCGTAGGGATGG----CGGTCGT-CCCGCCACAGCCTTG-----------------------------------------------------GCTCCGCCATCTTTGAAATGGCC s panTro4.chr19 59930147 161 + 63644993 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-GAGATTAAATACCTGG-ATCACAGCCAAGTCCAAA-GCCTAGGACT----------------TCATCCTGGGAGCAGTGCGTAGGGATGGGTGGCGGTCGT-CCCGCCACAGCCTTG-----------------------------------------------------GCTCCGCCATCTTTGAAATGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862696 162 + 60714840 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-AAGATTAAATACCTGGAATCACAGCCAAGTCCAAA-GCCTAGGACT----------------TTATCCTGGGAGCAGTGCGTAGGGATGGGTGGCGGTCTT-CCCGCCACAGCCTTG-----------------------------------------------------GCGCCGCCATCTTTGAAATGGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662924 159 + 64156825 TGCGTCC-AAGCGCGGGCTCTGCCTGGACACAGCGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCAAGTCCAAAGGCCTAGAACT----------------TTATCCTGGGAACAGTGTGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCC---CCGTCTTTGAAATGGCC i rheMac3.chr19 I 30 C 0 s macFas5.chr19 55803949 162 + 59248254 TGCGTCC-GAGCGCGGGCTCTGCCTGGACACAGCGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCAAGTCCAAAGGCCTAGGACT----------------TTATCCTGGGAACAGTGTGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCCCCGCCGTCTTTGAAATGGCC i macFas5.chr19 I 30 C 0 s papAnu2.chr19 47911948 162 + 51301725 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCCAGTCCAAAGGCCTAGGACT----------------TTATCCTGGGAGCAGTGCGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCCCCGCCGTCTTTGAAATGGCC i papAnu2.chr19 I 30 C 0 s chlSab2.chr6 47617455 162 + 50890351 TGCGTCC-GAGCACGGGTTCTACCTGGACACAGTGGGGAGG-AAGATTAAATACTCGG-ATCACAGCCCAGTCCAAAGGCCTAGGACT----------------TTACCCTGGGAGCAGTGCGTAGGGATAGCTGGCGGCGTT-CCCGCCACAGCCTTG-----------------------------------------------------ACCCCGCCGTCTTTGAAATGGCC i chlSab2.chr6 I 92 C 0 s calJac3.chr22_GL285922_random 19881 232 + 138250 TGTGGCTAGACCATGGGCTCTATATGGACACAGGGAGGAGC-AAGATTAAATCCTTGG-ATCACAGCCAAGTCAGAAGGGCGCAGTCTTCCCATCACAGCCTCGTTATCCTGGGAGCGGTGCGTAGGGAAGGGCAGCAGTCTT-CCCATCACAGCCTTGTTATCCTGGGAGTGGTGCATAGGGAAGGGCAGCAGTCTTCCCATCACAGCCTTGCTCTGCCATCTTTGAAATGGCC i calJac3.chr22_GL285922_random C 0 I 306 s canFam3.chr1 20069649 115 - 122678785 ------------------------------CAATGGGGGACAAAGCTTACACACATGC-ATCAGAGCAAAGTCAGAA---------------------------T---------AGCAGCGTGTAGGAATGAGCAATGGTCTTCCCCATCAGCCCCTTG-----------------------------------------------------GCTCCACCATCTTTGAAATGGCA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=300341.000000 s hg38.chr19_GL949748v2_alt 998440 119 + 1064304 CCATCACCCAAAACGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGTAAGAGACGGACAGTTCGGTGAAGT-GATTAAAAGC s panTro4.chr19 59930308 118 + 63644993 C-ATCACCCAAAATGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGTAAGAGACGGACAGTTCGGTGAAGT-GATTAAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862858 119 + 60714840 CCATTACCCAAAATGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGGAAGAGACAGACAGTTCAGTGGAGT-GATTAAAAGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663083 119 + 64156825 CCAATACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCGAGGACTTTCCTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804111 119 + 59248254 CCAATACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCGAGGACTTTCCTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912110 119 + 51301725 CCATTACCCAAAATGCTCCTCCTCCTGAAC-GCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCAAGGACTTTCTTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47617617 119 + 50890351 CCGTTACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCCGTCCTCACACCGAGGACTTTCTTGGGATGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i chlSab2.chr6 C 0 T 5744 s calJac3.chr22_GL285922_random 20419 119 + 138250 CCATTACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAACTCCACTCCACAGCCATGCTCCATCCTCACACCAAGGACCTTCTTGGGAAGAGACAGACAGTGTGGTGAAGC-GATGAAAAGC i calJac3.chr22_GL285922_random I 306 C 0 s canFam3.chr1 20069764 119 - 122678785 -CATTATCCAAAAACCTTATCTGTCTGCACACTCAGAGCCCACCTCCAT-CCCATCCTTGATCCTCAAACCAAGGACTTTATTTGGAAGAGTCAAGTTATCTCCTGAAGCAGACTTAAAGC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=606449.000000 s hg38.chr19_GL949748v2_alt 998559 299 + 1064304 CTACAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCACCAGTTGTGAAGACTTCGTTTGTGAATGAGACGGTCAGTTCAGCGGTGGCTTCTGAGAATTCT---AAGAA---------AGCAA----------AACAATGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTTTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTG--ACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- s panTro4.chr19 59930426 308 + 63644993 CTACAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCACCAGTTGTGAAGACTTTGTTTGTGAATGAGATGGTCAGTTCAGCGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAAAGCAA----------AACAACGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTTTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTG--ACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862977 310 + 60714840 CTATAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCCCCAGTTGTGAAGACTTTGTTTGTGAATGAGACGGTCAGTTCAGCGGTGGCTTCTGAGAATTTT---AAGAATTATAAGAAAGCAA----------AACAATGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTCTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663202 310 + 64156825 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGACGGTCAGTTCAGTGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAAAGCAA----------AACAATGTGAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTTAAAAGG-TGTAAGACTTATCTT--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804230 310 + 59248254 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGACGGTCAGTTCAGTGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAACGCAA----------AACAATGTGAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTTAAAAGG-TGTCAGACTTATCTT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912229 310 + 51301725 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAAACGGTCAGTTCAGTGGTGGCTTCTGGGAATTCT---AAGaattataagaaagcaa----------aacaatgtGAAGTCTTCCCCGTGGTTCTCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTCGAAAGG-TGTAAGACTTATCTT--- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 20538 315 + 138250 CTCTAGGCTTAGGCAGTGGAAGAGAGAGCTCTGTCCTCACGCTCCTTTCTGCTGAGCATGCAATGCCTGGTTACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGATGATCAGTTTACTGGTGGCCTCTGGGAATGCTCAGGAGAATTACAAGAAAGCAA----------AACAATGTTAGGTCTTCCTCGTGGCTCCCTATATCCCCTAGATACCTCCATTGCCCTTGTGAAATATCTAGGCTCCCTGAAACCCCTTTCTCTCTGACGGACACTGCACAGACATTGAAGACAGACAAATTCAAAATG-TATAAGACttttttt--- i calJac3.chr22_GL285922_random C 0 I 8591 s canFam3.chr1 20069883 305 - 122678785 CTACGGCCTTAGATGATGAAAGAGAAA--TCTATCTACATACTCCTTTCTACTGGGTTCCGAGTGCCTGATTACTCACCAATTGTGGAGCTCTTGTTGAGGTGCAAGTTGCTCTGTTTTCTGGAGGCTTCTGGGAATTCT---AAG-----CAAGAGGGTAATGAGAACATGGATAACATCAGATCTTCCCAGTGAGTCCCTAC------------TCTGCATACCCTTTCTGAGCTGTCTGGGCTTCCCAGAACCCCTT--TCTCTGGCACACACTGCATGAACACTGAGGAGAGAAAAAAGCAGAGGGCTATAAGACATGTTCTCTT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=273656.000000 s hg38.chr19_GL949748v2_alt 998858 217 + 1064304 ----CCATGACCGGCTTAGTAAGAAGCAGatccgttcagcaattgatagacacttggttttttttccacgttttgctgttatgaatattgctgctgtgaacattgacgtacaggtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggggtggtggaatcactgggtcatacagtaactctgtgttttac------------tttttgaagaactaccag s panTro4.chr19 59930734 216 + 63644993 ----CCATGACCGGCTTAGTAAGAAGCAGatccgttcagcaattgatagacccttgggtttttt-ccacgttttgctgttatgaatattgctgctgtgaacattgacgtacaggtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggggtggtggaatcactgggtcatacagtaactctgtgttttac------------tttttgaagaaccaccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56863287 211 + 60714840 ----CCATGACTGGCTTAGTAAGAAGCAGatccgttcatcaattgatagacacttgggttt----ccacgttttgttgttatgaatattgctgctgt-aacactgacatacaagtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggtgtggcagaattactgggtcatacagtaactctgtgttttac-------------ttttgaagaactaccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663512 223 + 64156825 ----CCATCGCCGGCTGAGTAAGAAGCAGatctgttcatcagttgctgggcacttgggtttttt-ccacgttttgctattgtgaatattgctgctgtgaacattcacatacaagtttttgtgtgatcataagttttctgttctctt----------gggcacacacccaggtgtgattgaatcactgggtcatagagtaactctgtgttttacttttta-----ctttttgaaaaactaccag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804540 223 + 59248254 ----CCATCGCCGGCTGAGTAAGAAGCAGatctgttcatcagttgctgggcacttgggtttttt-ccacgttttgctattgtgaatattgctgctgtgaacattcacatacaagtttttgtgtgatcagaagttttctgttctctt----------gggcacacacccaggtgtgattgaatcactgggtcatagagtaactctgtgttttacttttta-----ctttttgaaaaactaccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912539 223 + 51301725 ----CCATCGCCGGCTGAGTAAGAAGCAGATccgttcatcagttgatgggcacttgggttttTC-CCacattttgctattatgaatattgCTGCTGTGAACGTtcacatacaagtttttgtgtgatcATAAGTTTTCTGTTCTCTT----------GGGTACACACCCAGGGCTGATTGAATCACTGGGTCATAGAGTAActctgtgttttacttttta-----ctttttgaaaaactaccag i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20070188 237 - 122678785 CTATCTCTCAGTGGGTGCATAAGAAATGAatccattcatccactgatggacattacattatctc-ctttttggggctactatgaataatgttgccatgaacatttatgtacacatttt--tatgaacatgcattttttaatttcttaatttggggggagcatatagctacaagtg---gaatagctgagtcctgtgataattttatgatatggtcataggatattcttttgaggaaatgctga i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=113444.000000 s hg38.chr19_GL949748v2_alt 999075 109 + 1064304 act-tctttcttttttttct-------------------------tt--tttttttttttttgagacagagtctcattctgttgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcct s panTro4.chr19 59930950 102 + 63644993 act-tgtttctttttttt----------------------------------ttttttttttgagacggagtctcgttctgttgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56863498 91 + 60714840 act-ttt---------------------------------------------ttctttttttgagacgaagtctcattctgttgcccaggctggagtacagtggcgcaatctcagctcactgcaacctccacctcct i ponAbe2.chr19 C 0 I 9605 s rheMac3.chr19 60663735 131 + 64156825 actgtttttctttcttttcttttcttttttttctttttctt----tt--tttttttttttttgagacggagtctcgttctgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaagctccgcctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804763 135 + 59248254 actgTttttctttcttttcttttcttttttttctttttctttttctt--ttcttttttttttgagacggagtctcgttctgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaagctccgcctccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912762 137 + 51301725 actgtttttctttcttttctttttttttttttctttttctttttctttgtttttttttttttgagacggagtctcgttctgttgcccaggctggagtgcagtggcgcgatctcagctcgctgcaacctccacctccc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20070425 0 - 122678785 C e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=267724.000000 s hg38.chr19_GL949748v2_alt 999184 205 + 1064304 gggttcaagcgattctcctccctcagcctcccgagtagctgggattacaggcacctgccatcacgcctggccaacttttttttttgtactttagtagaggcggggtttcaccatgttggccaggatggtctcgatctcctgacctcgtgatccaccctccttggcctctcaaagtgctgggattacaggctgcgcctggccacag s panTro4.chr19 59931052 205 + 63644993 gggttcaagcgattctcctccctcagcctcccgagtagctgggattacaggcatctgccaccacgcctggccaacttttttttttgtactttagtagaggcggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggattacaggctgcgcctggccacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873194 204 + 60714840 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcccggccaac-tctttttttgtactttagtagaggcggggtttcaccatgttggcccggatggtctcaatctcctgacctcatgatccaccctcctcggcctctcaaagtgctgggattacaggctgcgcctggccacag i ponAbe2.chr19 I 9605 C 0 s rheMac3.chr19 60663866 204 + 64156825 gggttcacgcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggatgacaggctgcgcctggccacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804898 204 + 59248254 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggatgacaggctgcgcctggccacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912899 204 + 51301725 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgcctggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggattacaggctgcgCCTGGCCACAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20070425 0 - 122678785 C e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=174098.000000 s hg38.chr19_GL949748v2_alt 999389 121 + 1064304 actgtttttcaaagcagctgcaccattttatattcccaccagcaatataagaaggttc------ttccaaatcctcaccaatacttcttgt------------------ccgtttgttttgttttaaaaatcatagtcatcctag s panTro4.chr19 59931257 121 + 63644993 actgtttttcaaagcagctgcaccattttatattcccaccagcaatacaagaaggttc------ttccaaatcctcaccaatacttcttgt------------------ccgtttgttttgttttaaaaatcatagtcatcctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873398 120 + 60714840 actgtttttcaaagcagctgcaccattttatattcccaccagcaatacaagaaggttc------ttccaaat-ctcaccaatacttctcgt------------------ctgtttgttttgttttaataatcacagtcatcctag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664070 121 + 64156825 actgtttttcaaggcagctgcaccattttatattcccaccagcaatacaggaaagttc------ttccaaatcctcaccaatacttcctgt------------------ccgtttgttttattttaacaatcacagccatcctag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55805102 119 + 59248254 actgtttttcaaggcagctgcaccattttatattcccaccag--atacaggaaggttc------ttccaaatcctcaccaatacttcctgt------------------ccgtttgttttattttaacaatcacagccatcctag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913103 121 + 51301725 ACTGTTTTTCAaggcagctgcaccattttatattcccaccagcaatacagGAAGGTTC------TTCCAAATCCTCACCAATACTTCTTGT------------------ccgtttgttttattttaataatcacaGCCATCCTAG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20070425 145 - 122678785 actgttttccacagcagcaacatgatgtttcattcccatcaacaatgtgtgggggttccaatttccccacatcctcaacaatacctgttgttgtacttaattattactattattattattattattattattattgccattctgg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=127637.000000 s hg38.chr19_GL949748v2_alt 999510 78 + 1064304 ttggcatggtgaattttatggtatgtgaattatatctcagtttgaataataagatgtggatccatgtcttcgtgagcc s panTro4.chr19 59931378 78 + 63644993 ttggcatggtgaattttatggtatgtgaattatatctcagtttgaataataagatgtggatccatgtcttcgtgagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873518 78 + 60714840 ttggcatggtgaattttatggtatgtgaattagatctcaatttgaataatcagatgtggatccatgtcttcatgagct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664191 78 + 64156825 ttggcatgGTCCATTTTATGGTATGTGGATTATATCTCAGTTTGAAGAAGAATAAGTGGATCCACATCTTCACGAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55805221 78 + 59248254 ttggcatgGTCCATTTTATGGTATGTGGATTATATCTCAGTTTGAAGAAGAATAAGTGGATCCACATCTTCACGAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913224 78 + 51301725 TTAGCATGGTACATTTTATGGTATGTGGATTATATCTCAATTTGAAGAAGAATAAGTGGATCCGCATCTTCATGAGCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29444 78 + 138250 TCGGCATGGTAAATTTTATGGTATGTGAGTTATAACTGAATTTGAAGAAGACGACGTGGGCCAGCATTTTCATGAGCT i calJac3.chr22_GL285922_random I 8591 C 0 s canFam3.chr1 20070570 71 - 122678785 tgggtgtgatgaatttcatggtttGTGA--CATATCTAAATTTAAAAAATAAGTAgagg-----tgccttggtggttc i canFam3.chr1 C 0 I 70 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=501.000000 s hg38.chr19_GL949748v2_alt 999588 1 + 1064304 t s panTro4.chr19 59931456 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873596 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664269 1 + 64156825 C i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55805299 1 + 59248254 C i macFas5.chr19 C 0 I 334 s papAnu2.chr19 47913302 1 + 51301725 C i papAnu2.chr19 C 0 I 347 s calJac3.chr22_GL285922_random 29522 1 + 138250 C i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=51255.000000 s hg38.chr19_GL949748v2_alt 999589 32 + 1064304 aGAGGAAGAATGAGCTCGTGTTAGCCTCAGAA s panTro4.chr19 59931457 32 + 63644993 aGAGGAAGAATGAGCTCGTGTTAGCCTCAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873597 32 + 60714840 aCAGGAAGAATGAGCTCGCGTTAGCCTCAGAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664273 32 + 64156825 TTAGGAAGAATGAGCTCGTGTTAGCCTCAGAA i rheMac3.chr19 I 3 I 354 s macFas5.chr19 55805634 32 + 59248254 aaaaaaagaaTGAGCTTGTGTTAGCCTCAGAA i macFas5.chr19 I 334 C 0 s papAnu2.chr19 47913650 32 + 51301725 aaaaaaagaatgagcttgTGTTAGCCTCAGAA i papAnu2.chr19 I 347 C 0 s calJac3.chr22_GL285922_random 29523 32 + 138250 AGAGGAAAAATGAGCTCATATTAGCCTCTGAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=27271.000000 s hg38.chr19_GL949748v2_alt 999621 24 + 1064304 CACGGGATCTCCACCTTCCAACTT s panTro4.chr19 59931489 24 + 63644993 CACGGGATCTCCACCTTCCAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873629 24 + 60714840 CACGGGATCGCCACCTTCCTACTT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55805666 24 + 59248254 CATGGGATCTCCACCTTCCTACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913682 24 + 51301725 CATGGGATCTCCACCTTCCTACTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29555 24 + 138250 CACAGGATATCTACCTTCCTACTA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e rheMac3.chr19 60664305 354 + 64156825 I a score=30953.000000 s hg38.chr19_GL949748v2_alt 999645 84 + 1064304 AGGCCAttttctttttttcttttt-----ttttttttttttgagacagagtcttactc-tgtcgtccaggctggagtgcagtggtgcaat s panTro4.chr19 59931513 89 + 63644993 AGGCCATTTTCtttttctctttttcttttttttttttttttgagacagagtcttactc-tgtcgtccaggctggagtgcagtggcgcaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873653 85 + 60714840 AGGCCAttttcttttttttttttt----tttttttttttttgagacagagtctcactc-tgtcgtccgggctgaagtgcagtggcgcgat i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29579 69 + 138250 AGACCAtt---------------------ttttttttttttgagatggagtttcgctcttgttgcccaggctggagtgtaatggcacaat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e papAnu2.chr19 47913706 0 + 51301725 C e macFas5.chr19 55805690 0 + 59248254 C e rheMac3.chr19 60664305 354 + 64156825 I a score=99251.000000 s hg38.chr19_GL949748v2_alt 999729 234 + 1064304 ctcggctcactgcaagctctgcctcccgggttcacaccattatcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaatttttttgtattttcagtagagatggggtttcaccgtgttagccaggatggtct---cgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggaatacaggcgtgagccaccgcgcccggcc s panTro4.chr19 59931602 234 + 63644993 ctcggctcactgcaagctccgcctcccgggttcacaccattgtcctgcctcagcctcccgagtagctggaactacaggcacccgccaccacgcctggctaatttttttgtattttcagtagagatggggtttcaccgtgttagccaggatggtct---tgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873738 233 + 60714840 cttggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaa-ttttttgtatttttagtggagatggagtttcaccgtgttggccaggatggtct---cgatttcctgacctcgtgatccaccctcctcggcctcccaaagtgctgggattacaggcatgagccaccgcacacagcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29648 233 + 138250 ctcggctcactgcaacctctgccttctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgcaccaccatgcccagctaa-ttttttgtatttttagtagagacggggtttcaccatgttgaccagggtggtct---ggatctgttgacctcgtgatccacccgcctcggcctcccaaagtgctgggtttacaggcttgagccaccgcgcctggcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20070711 142 - 122678785 ccctgctcagtggggactctatctccc--------------------tctccatctccc-----tctgtgatctc-----------------tctggctct--------cattctcaa-agtgaatcagtatatctgtacaaGCTCAG-TGGTTTATGCCATCTTCTGAGTGTAAGAGGCTCC--------CCTCCTTA----------TTA------------------------- i canFam3.chr1 I 70 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e papAnu2.chr19 47913706 0 + 51301725 C e macFas5.chr19 55805690 0 + 59248254 C e rheMac3.chr19 60664305 354 + 64156825 I a score=547849.000000 s hg38.chr19_GL949748v2_alt 999963 234 + 1064304 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGAGGCCACCAAAATA-TTCCTGAACTGCCTCAGCTGATAAATACGAAGCTCTTGT-TGCAGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAACCAGCTTGGAAAAAACTAGTTTATGCTCAGCTCTCGGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTATTTCTCTTCGTGTGAGATGCATTAATAAACCTT-----TTTT s panTro4.chr19 59931836 239 + 63644993 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGAGGCCACCAAAATA-TTCCTGAACTGCCTCAGCTGATAAATACGAAGCTCTTGT-TGCAGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAAGCAGCTTGGCAAAAACTAGTTTATGCTCAGCTCTCGGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTATTTCTCTTCGTGTGAGATGCATTAATAAACCTTGTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873971 237 + 60714840 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGTGGCCACCAAAATATTTCCTGAACTGCCTCAGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAACCAGCTTGGCAACAACTACTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAACCTTGT---TTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664659 237 + 64156825 AGGCCGTTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCGGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAGCCTTGT---TTCT i rheMac3.chr19 I 354 C 0 s macFas5.chr19 55805690 237 + 59248254 AGGCCATTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCGGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAGCCttgt---ttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913706 229 + 51301725 AGGCCATTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTT----GTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCTGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTA-----CTTCCTGTGAGATGCATTAATaagccttgt---ttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47611992 219 + 50890351 AGGCCATTTTCTTAACCAGGGACCTCC-------CGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTGTTTACGGTGGACC-------------CCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTA-----CTTCCTGTGAGATGCATTAATAAGCCTTGT---TTCT i chlSab2.chr6 T 5744 C 0 s calJac3.chr22_GL285922_random 29881 206 + 138250 AGACCATTTCCTTAACCAGGGAGCTTC-------TGTAGC-----------TTC-----------------ATACATATTAAGCCCTTGT-TGCAGTGGGTACCATTTTGG-GAGTCTTTTTATGGTGGAACCAGCTCAGCAAAACCTAATTTATGCTCAGCTGTC--TGGCATAATGATAGTGTGGGTATTATTTGGTCTTTGTTCCTTCTCTTCCTGTGAGATGCATTAATAAGCCTTGT---TTt- i calJac3.chr22_GL285922_random C 0 I 2030 s canFam3.chr1 20070853 233 - 122678785 AGGCCATTTTCTTATCCAGGGACTGCCCTGGTTACATGGACACCAAAACATTTCCTAAAAACCTTCAACCTATAAATATGTAGCTCCTATCAAGAGTGGGGACTATCTTGGTGGGCCTTTTTATGGTAAAACCAGCTCATCAAAGCCTAC-----------CTATCTGTGGTATAATAAGAGCTTGCATATTATTTGTTCTCTGTTATTTCTCTTCCTGTAAGTCTCATTTATAAATTTTGT---TT-- i canFam3.chr1 C 0 I 8353 e nomLeu3.chr10 103362684 100 - 106955855 I a score=6248.000000 s hg38.chr19_GL949748v2_alt 1000197 8 + 1064304 tttttttt s panTro4.chr19 59932075 8 + 63644993 Tttttttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874208 8 + 60714840 tttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664896 6 + 64156825 TTTTTt-- i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55805927 6 + 59248254 tttttt-- i macFas5.chr19 C 0 I 953 s papAnu2.chr19 47913935 6 + 51301725 tttttt-- i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47612211 6 + 50890351 TTtttt-- i chlSab2.chr6 C 0 I 3 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=72712.000000 s hg38.chr19_GL949748v2_alt 1000205 67 + 1064304 caattaaaatt-----tcagttccagaatccatgtgcaggacgtgcaggtttgttacataggtaaacgtgtg s panTro4.chr19 59932083 67 + 63644993 caattaaaatt-----tcagttccagaatccatgtgcaggacgtgcaggtttgttacataggtaaacgtgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874216 67 + 60714840 aaattaaaatt-----taagttccagaatccatgtgcaggatgtgcaggtttgttacacaggtaaacgtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664908 69 + 64156825 taattaaaattta---taagttacaggatccatgtgcaggaggtgcaggtttgttacacaggtaaacgtgtg i rheMac3.chr19 I 6 I 893 s papAnu2.chr19 47913947 69 + 51301725 taattaaaatttattttaagttccaggatccatgtgcaggaggtgcaggtttgttacacaggtaaacgt--- i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47612220 69 + 50890351 aaattaaaatgtattttaagttccaggatccatgtgcgggaggtgcaggtttgttacacaggtaaacgt--- i chlSab2.chr6 I 3 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55805933 953 + 59248254 I a score=445864.000000 s hg38.chr19_GL949748v2_alt 1000272 544 + 1064304 ccatggtggtttgctgcacccatcaacccatcacctaggtattaagccccacacgcatcagctatttatcctgatcctctccctcccccaatt-ccccctacaggccccagtgtgtggtgttcccctccctgtgtccatgtgatctcattgttcagctgccacttacaagtgagaacatgcagtg-tttggttttcagttcctgtgttagtttgctgaggataatgttttccagctccatccatgtccctgcaaaggacatgatctcattcctttttatggctgcatagtattccatggtgtatatgtactgtatttgctttatcctttctatcattgatgggcatttgggttgattccttgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatggtatttctggccaggcgcagtggctcacacatgtaatcccagcactttgggaggccgaggtgggcagatc s panTro4.chr19 59932150 545 + 63644993 ccatggtggtttgctgcacccatcaacccatcacctaggtattaaaccccacacgcatcagctatttatcctgatcctctccctcccccagtt-ccccctacaggccccagtgtgtggtgttcccctccctgtgtccatgtgatctcattgttcagctgccacttacaagtgagaacatgcagtggtttgcttttcagttcctgtgttagtttgctgaggataatgttttccagctccatccatgtccctgcaaaggacatgatctcattcctttttatggctgcatagtattccatggtgtatatgtaccgtattttctttatcctttctatcattgatgggcatttgggttgattccttgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatggtatttctggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874283 541 + 60714840 ccatggtggtttgctgcacccatcaacccatcacccaggtatcaagcgccacacacatcagctgtttatcctgatcctctccctcccccag---cccccgacaggccccggggtgt-gtgctcccctccctgtgtccacgtgttctcattgttcagctcccacttacaagtgagaacatgcagtg-tttgctttcctgttcttgcgttagtttgctgaggataatggcttccagctccatccatgtccctgcaaaggacgtgatctcattcctttttatggctgcatagtattccatggtgtacatgtaccgtattttctttatccagtctatcattgatgggcatttgggttgattccttgtttttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatgatatttctggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47914016 540 + 51301725 -----gtggtttgctgcacccatcaa-ccatcacctaggtattaaaccccaCACGcgttagctatttttcctgatcctctccctcccctgactcccccctacaggccccagtgtgtgttgttcccctccctgtgtccatgtgttctcattgttcagctcccacttacaagtgagaaagtgtggta-tttgcttttctgttcttgcgttagtttgctgaggataatggcttccagctccatccatgtccctgcaaaggacatgacctcattcctttttatggctgcatagtattccatgctgtgtatgtaccatattttctttatgcagtctgtcattgatgggcatttgggttgattctatgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatgttatctttataatacaatgatttatatgcttttggatatataaccagtaatgggattgctgggtcaaatggtatttctgaccgggtgcagtggctcacacctgtaatcccagcactctgggaggccgaggtgggcagatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47612289 539 + 50890351 -----gtggtttgctgcacccatcaa-ccatcacctaggtattaaaccccacacgcgttagctctttttcctgatcctctccctcccctgact-ccccctacaggccccagtgtgtgttgttcccctccctatgtccacgtgttctcattgttcagctcccacttacaagtgagaaagtgtggtg-tttgcttttctgttcttgcgttagtttgctgaggataatggcttccagctccattcatgtccctgcaaaggacatgacctcattcctttttagggctgcatagtattccatgctgtgtatgtactatattttctttatgcagcctgtcattgatgggcatttgggtagattccatgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcgtgttatctttataatacaatgatttatatgcctttggatatataaccagtaatgggattgctgggtcaaatggtatttctgACGgggtgcagtggctctcacctgtaatcccagcactctgggaggccgaggtgggcagatc i chlSab2.chr6 C 0 I 5309 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=11142.000000 s hg38.chr19_GL949748v2_alt 1000816 22 + 1064304 acctgaggtcaggagctcaaga s panTro4.chr19 59932695 22 + 63644993 acctgaggtcaggagctcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874824 22 + 60714840 acctgaggtcaggagcttgaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47914556 22 + 51301725 gcctgaggtcaggagttcaaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=91206.000000 s hg38.chr19_GL949748v2_alt 1000838 371 + 1064304 ccaccctggccaacatggtgaaactcccgtctctagcaaaaatccaaaaattagccaggcgttgtggcatgcacctgcagtcccagctactcgggaggctgaggcaggagaatcacttgaaccctggaggcagaggctgcagtgagccgagatcatgcccctgcaatccagcctgggtgacagagtgagactctgttt---aaaaaaaaaaaaaaaaaaaaaaGGTGGCcctgg-tgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcagaagtttgagaccagcatgaccaacaaggtaaaaccccatctctactaaaagaaaaaaaaaaaaaaa---agccagg s panTro4.chr19 59932717 369 + 63644993 ccaccctggccaacatggtgaaactcccatctctatcaaaaatacaaaaattagccaggcgttgtggcatgcacctgcagtcccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggcagaggctgcagtgagccgagatcatgcccctgcaatccagcctgggtgacagagtgagactctgttt---ttaaaaaaaaaaaaaaaaaaaaGGTggcccggggtgcggtggctcacgcctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcagaagtttgagaccagcatgaccaacaaggtaaaaccccatctctactaaaagaaa---aaaaaaaaa---aaccaag i panTro4.chr19 C 0 I 78 s ponAbe2.chr19 56874846 377 + 60714840 gcacgctggccaacatggtgaaactcccctctctatcaaaaatacaaaaattagccaggcgtggtggcatgcacctgcagtcccagctagtcgggaggctgaggcaggaaaatcgcttgaaccctggaggcagaggctgcagtgggtcgagatcataccactgcaatccagcctgggtgacacagtgagactctgtttggaaaaaaaaaaaaaaaaaaaaaaaaGCTggccggg-tgcggtggctcacgcctgtaatcccagcactttgagaggccaaggcgggtggatcacctgaggtcagaagtttgaaaccagcgtgaccaacaaggtgaaaccccatctctattaaaaaaaaaaaaaaaaaaaaattagccagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=6888.000000 s hg38.chr19_GL949748v2_alt 1001209 77 + 1064304 catggtggcaggcgcctgtagtcccagttacttaggaggctgagacaggataattgcttgaacctgggaggtggagg s ponAbe2.chr19 56875223 77 + 60714840 catggtggtaggtgcctgtggtcccagctacttaggaggctgagacaggataattgcttgaacctgggaggtggagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I e panTro4.chr19 59933086 78 + 63644993 I a score=47222.000000 s hg38.chr19_GL949748v2_alt 1001286 201 + 1064304 ttgcagtgagccgagatcgcaccactgcactccagcatgggctattgagcaatactacatctcaaaaaaaaaaaaaa--------ggaaaaaggatttctggttctgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcgccagcacctgtt s panTro4.chr19 59933164 209 + 63644993 tccccgtgacccaagattgccccccccccctccagcatggggtattgagcaagactatttttcaaaaaaaaaaaaaaaaaaaaaaggaaaaaggatttctggttttgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcgccagcacctgtt i panTro4.chr19 I 78 C 0 s ponAbe2.chr19 56875300 202 + 60714840 ttgcagtgagccaagatcgcaccactgcactccagcatgggctattgagcaagactccatctaaaaaaaaaaagaaa-------caaaaaaaggatttctggttctgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcaccagcatctgtt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=26089.000000 s hg38.chr19_GL949748v2_alt 1001487 317 + 1064304 gtttcttgacttttgttggttttttttttttttttttgagatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatcttggctcactgcaacctccgcctcccgggttcacgccattctcctgcctcagcctcccgaatagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatctgcctgcctcggcctcccaaagtgctgggattaccggcgtgagccaccgtgcccggc s panTro4.chr19 59933373 313 + 63644993 gttttttgacttttttt---tttttttttttttttttgagatggagtctcactctgtcgcccaggctggagtgcagtggcgcaatcttggctcaccgcaacctctgcctcctgggttcacgccattctcctgcctcagcatcccgagtagctggtactagaagtgcccgccaccacgtccggctaattttttgtatttttag-agagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattaccggcgtgagccaccacgcccggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e ponAbe2.chr19 56875502 0 + 60714840 C e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=223394.000000 s hg38.chr19_GL949748v2_alt 1001804 872 + 1064304 gtttcttgactttttaataatcgccattttga-ctggtgtgagatggtgtctaaatgtggttttgatttgcatttctctaatgattggtgatgttgagcttttttttgtatgtttactggctgcataaacgtcttcttttgagaagtgactgttcatgtcctttacccactttttaatggttttttttttcttgtaaatttgtttaacttccttgtagattctggatattagacttttgtga-attgatagattgcaaacattttctcccattctgtaggttgtctgttcactctgatgatactttcttttgctgagcagaagctctttagtttagttagatcccatttgtcagtttttgcttttgttacaattgcttttgacgtttttgtcatgaaatctttgcccatgcctgtgtcctgaatggtattacctagattttcttctagggtttttatagttttcgggttttgcatccaagtctttcatccatcttgagttaatttttgtacaaggtgtaaggaacgggtccagtttctattttctgcatatggctagccaattctcccagcaccatttattaacccacagccaatttcatactaaatgggcatttcccttgaaaaccagcacaagacaaggatgccctctttcaccactcctattcaacatagtattggaagttctggccaggataatcaggcaagagaaagaaataaaggatactcaaataggaagagaggaaatcaaactatctctgtttgcagatgacatgatcctatatctagaaaaccccatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat s panTro4.chr19 59933686 871 + 63644993 gtttcttgactttttaataatcgccattttgaactggtgtgagatggtgtctcaatgtggttttgatttgcgtttctctaatgattggtgatgttgagcttttttcggtatgtttactggccgcatgaacgtcttcttttgagaagtgactgttcatgtcgtttacccactattttatggttttttttttcttgtaaatttgtttaacttccttgtagattctggatattagacttttgtga-attgatagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagtttcttttgctgagcagaagctctttggtttagttagatcccatttgtcagtgtttgcttttgttacaattgcttttgacatttttgtcatgaactctttgcctgtgcctgtgtcctgaatggtattacctagattttcttctagagtttttatagttt-cgggttttgcatctaagtctttcatccatcttgagttaatttttgtacaaggtgtaaggaaagggtccagtttctattttctgcatatggctagccaattctcccagcaccatttattaacccacagccaatttcatactaaatgggcatttcccttgaaaaccagcacaagacaaggatgccctctttcaccactcctattcaacagagtattagaagttctggccaggataatcag-caagagaaagaaataaaggatactcaaataggaagagaggaaatcaaactatctctgtttgcagatgacatgatcctatatctagaaaaccccatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56875502 863 + 60714840 gtttcttgactttttaataatcgccattttga-ctggtgtgagatggtgtctcaatgtggttttgatttgcatttctctaatgattggtgatgttcagctttttttcatatgtttactagccacgtaaacatcttcttttgagaagtgatcgttcatgtcctttgcccactttttaa-----ttttttttcttataaatttgtttaacttccttgtagattctgaatattagacttttgtgagattgatagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagtttcttttgctgagcagaagctctttagtttatttagatcccatttgtcagtttttgcttttgttacaattgcttttgacatttttgtcatgaaatctttgcctgtgcctatgtcctgaatggtattacctagattttcttctagagtttttatagttt-tgggttttgcatttaagtctttaatccatcttgagttaatttttgtataaggtgtaaggaaagggtccagtttctattttctgcacatggctagccaattctcccagcacc----attaacccacagctaatttcatactaaataggcatttcctttgaaaaccaacacaagacaaggatgccctctttcaccactcctattcaacatagtattggaagttctggccagaataatcaggcaagagaaagaaataaaggatattcaaataggaagagaggaaatcaaactatctgtctttgcagatgacatgatcctatatctagaaaaccctatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=475729.000000 s hg38.chr19_GL949748v2_alt 1002676 991 + 1064304 cacaagcattcctatacaccaacaatagacaggcagagagccaaatcatgaaggaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcggacacaaacaaatggaaaaacattccatgctcatggataggatgaatcaatatcgtgaaaatggccatactgcccaaagtaatttatagattcattgctattcccattgaactatcattgacattcctcacacaattag--aaaaaacta---taaaattcatatggaaccaaaaaagggcccatatagccaagacaatactaagcaaaaagaacaaagctggaggcctcaggct--cagacttcagactatattacaaggtgatagtaaccaaaacagcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagatctcagaaataagaccacacatctacaaccatctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAACACAGCGtgt--ggtatttgcatgccatgtgatacagtttgaatatgtgttcccaccaaatctcatactggattatga-tccccaatgttggaggtgggggcctggtgggaggtgtttggatcataggggtggatccctc-attgcttggtgctttccttgcaatagtaagtgaattctcacaagatctggctattgcaaagtgtggcatgtcccccagtcccaactctctctctctcttgctcctgctcccaccacatgagacagctaccccctctttgccttctgccatgactgtaagcttcctgaggcctccccaaaagcagaagccagccttctgcttcctatacggccttcagaaccatgaaccaattaaac------ctcttttctt s panTro4.chr19 59934557 988 + 63644993 cacaagcattcctatacaccaacaatagacaagcagagagccaaatcatgaaggaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcggacacaaacaaatggaaaaacattccatgctcatggataggatgaatcaatatcgtgaaaatggccatactgcccaaagtaatttatagattcattgctattcccattgaactatcattgacattcctcacacaattag--aaaaaactactttaaaattcatatggaaccaaaaaagggcccatatagccaagacaatactaagcaaaaagaagaaagctggaggcctcaggct--cagacttcagactatactacaaggtgacagtaaccaaaacagcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagatctcagaaataagaccacacatctacaaccatctgatcttcaacaaacctgacaaaaacaaacaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAACACAGCGtgt--ggtatgtgcatgccatgtgatacagtttgaatatgtgttcccaccaaatctcatactggattatga-tccccaatgttggaggtgggggcctggtggggggtgtttggatcataggggtggatccctc-attgcttggtgctttccttgcaatagtaagtgaattctcacaagatctggctattgcaaagtgtggcatgtcccccagtcccaactctctctctctcttgctcct------accacgtgagacagctaccccctctttgccttctgccatgactgtaagcttcttgaggcctccccaaaagcagaagccagccttctgcttcctatacggccttcagaaccatgaaccaattaagc------ctcttttctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56876365 991 + 60714840 cacaagcattcctatacaccaacaatagacaagcagagagccaaatcaagaaggaactcccattcacaattgctacaaacagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcagacacaaacaaatggaaaaacattccatgctcatggataggacgaatcaatatcatgaaaatggccatactgcccaaactaatttatagatttgttgctattcccattgaactatcactgacatttctcacagaattag--aaaaaactactttaaaattcatatggaaccaaaaaagggcccatatagccaagacaatcctaagcaaaaagaacaaagctggaggcatcaggct--cagacttcaaactatactacaaggtgacagtaaccaaaacagcatggtactggtacaaaaacagacac--agaccaatggaacagaatagagatctcagaaataagaccacacacctacaaccatctaatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAATACAGTGTGT--GGTATGAGCATGCCATGtgatacagtttgaatatacgttcccaccaaatctcatactggattatga-tccccagtgttggaggtgggggccgggtgggaggtgtttggatcataggggtggatccctc-attgcttggtgctttctttgcaatggtaagtgaattctcacaagatctggctattgcaaagtgtggcacgtcccccagtcccaactctctctctctcttgctcctgctcccaccacgtgagacagctacccaccctttgccttctgccatgactgtaagcttcctgaggcctccccgaaaccagaagccagccttctg-ttcctatacagccttcagaaccgtgaaccaattaaac------ctcttttctt i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 32117 977 + 138250 cacaagcatttctatacactaacagtagacaagcagagagccaaatcatgaaggaactcccattcacaattgctacaaaaagaataaaatacctaggaatacagctaataagtgaaacggaggacatcttcaagg------------------------aaatcagagaggatacaaacaaatggaaaaacattccac-ttcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattaattgttagtcccattgaactatgattgacattcttcacagaattagaaaaaaaactactttaaaattcatatggaaccaaaaaaggacccatatagccaagacaatcctaagcaaaaagaacaaagctggaagcatcaggctgccagacttcaaactatactacgaggtgacagtaaccaaaacagaatggtactgctac-aaaacagacacatagaccaatggaacagaatagaaatctcagaagtaagaccacacatttacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaagtattccctacttaataaGCCTTGTTTTGACTTTGATTTAAACTCAGTGTGTTAGGTATGTGCATGCCATGTGat--agtttgaatatacatgcccgccaaaccccatattggattatgaccccccactgttggagat-ggggcctggtgggaggtatttgaatcatgggggtggatccctcaattgcttggtgctgtcctcacaatagtgagtgaattctcacaacatgtgactattgcaaagtgtggcacatcctccagtcccaa--ttttctctctcttgctccttctcccagcatgtgagacacctgctccctcttcaccttctgccatgattgtaagcttcctgaggcctccccaaaagcagatgccagccttctgcttcctatacagccttcagaaccatgaaccaattaaacacctctttcttttctt i calJac3.chr22_GL285922_random I 2030 I 593 e canFam3.chr1 20071086 8353 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=149709.000000 s hg38.chr19_GL949748v2_alt 1003667 548 + 1064304 atcaatgatccagtctcagatatttatagcagcacaaaatcggcctaatatagcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgggcctcaggggcattgcactgagtgacaaaaggatatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaacaaattaatggataccaggagttagggatggcaagggaaggagaagggtgtaggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgactgcggtgatggtgacgcgaatctacaactgtgacaaattggcatagaactagacacctacTttatgccaatgtcaaattcctggtttttatgttgtactctaattacgtaagatgtaaccattagaggaaactggaaaaagagcacatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga s panTro4.chr19 59935545 548 + 63644993 atcaatgatccagtctcaggtatttatagcagcacaaaatcggcctaatatagcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgggcctcaggggcattgcactgagtgacaaaaggatatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaacaaattaatggataccaggagttagggatggcaagggaaggagaagggtgtgggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgaatgcggtgatggtgacacaaatctacaactgtgacaaattggcatagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactctaattatgtaagatgtaactattaggggaaactgaaaaaagagcacatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877356 548 + 60714840 atcaataatccagtctcaggtatttatagcagcacaaaaccagcctaatacaGcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgtgcctcaggggcattgcactgagtgacaaaagggtatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaaccaattaatggataccaggagttagggatggcaagggaaggagaagggtgtgggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgaatgcagtgatggtgacacgaatctacaactgtgacaaattggcacagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactgtaattatgtaagatgtaaccattaggggaaactggaaaaagagcagatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 33094 593 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=11514.000000 s hg38.chr19_GL949748v2_alt 1004215 102 + 1064304 aagttcaaaaaTTCAGTCAGAAGCACACGCACACATATGCACGCATGCACACACACA---------CATATGCACGCATGCAC------------ACACATATGCA-----------------------------------CGCACACA------------CACATATGC s panTro4.chr19 59936093 170 + 63644993 aagttcaaaaaTTCAGTCAGAAgcacacgcgcacacatgcacgcatgcacacacacatgcatgccacacatgcacacatgcacgcacacacacgcacacatatgcatgccgcacacacgcacacatacgcacgcgcgcacacgcacacatgcacgcatgcacacatatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877904 49 + 60714840 aagttcaaaaaTCCAGTCAGAAGcacacgc-----------------------------------------------------------------acacatatgcg-----------------------------------tgcacaca--------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362784 50 - 106955855 AAGTTCAAAAATTCAGTCAGAAGCACACGC-----------------------------------------------------------------ACACATATGCA-----------------------------------CGCATGCA--------------------C i nomLeu3.chr10 I 100 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=120289.000000 s hg38.chr19_GL949748v2_alt 1004317 216 + 1064304 ACGCA---------------------CACACGCACA----TGCACGCACACACACATATGCACGCACACAGTATGTGACCATCTTCCATGTCCCTGCCCACTAGGCATAATAGCCCTCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACGCCCAGCCTCCAGCCTA s panTro4.chr19 59936263 241 + 63644993 acgcatgcacacacacatgcatgccacacacgcacacatatgcacgcacacacgcacatgcacacacacaGTATGTGACCATCTTCCATGTCCCTGCCCACTAGGCATAATAGCCCCCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACGCCCAGCCTCCAGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877953 190 + 60714840 --------------------------cacacgcaca----tgcatg--------------------cacaGTGTGTGACCATCCTCCATGTCCCTGCCCACTGGGCATAACGGCCC-CATTCTGCCCTCAACCCCGCGAATCT---CATCCTTATCAACCTCGGCTCTTTCTAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACATGCCCAGCCTCCAGCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362834 220 - 106955855 ACACA---------------------CACACGCACACATATGCACGCACACGCGTACATGCACGCACACAGTATGTGACCATCTTCCATGTCCTTGCCCACTGGGCATAGTAGCCCCCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACACCCAGCCTCCAGCCTA i nomLeu3.chr10 C 0 I 302 s canFam3.chr1 20079439 195 - 122678785 -------------------------ACATGCACACACATGTGGGTGCATGCATACACATACACACATATAGTGTGC--------------------CTCATTTAGCATGACAGCCCCCATACTGCCCTCAGCCACACATGTCTGCACATTCTTGTCCAACTTGGCTCTTTTCAACATGCTTCTGTTCCTTTGGATTTGGGTCTACCCTGAG--ACAGGGAGTGTTAGAGATGCC------ACAGATCA i canFam3.chr1 I 8353 C 0 e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=303527.000000 s hg38.chr19_GL949748v2_alt 1004533 530 + 1064304 GCGTATGATATTCTTAAAGTGCAGGCCGTAGTCTGGTACACCGTATTCAGCTGAGATGTTTGTGAAAGTGGAGGGGATAACACGCCTCACACAAAACTTACCGcagtggttctcaaagcagcattctggagcca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctattctttaagcctccaggtgattcttatgctcatggaagtttgagaaccgctgATCAATGCATTCAGTGACTCAGAAACAGAGTCCCGGACTCTACAggtttgttggttggttggttggttggttggttggttAGTTTGTT--------TGTTTTTGTCACCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCATGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGCAGCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA s panTro4.chr19 59936504 538 + 63644993 GCATATGATATTCTTAAAGTGCAGGCCGTAGTCTGGTACACCGTATTCAGCTGAGATGTTTGTGAAAGTGGAGGGGATAACACGCCTCACACAAAACTTACCGcagtggttctcaaagcagcatcctggagcca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccgggtgattcttatgctcatggaagtttgagaaccgctgATCAATGCAATCAGTGACTCAGAAACAGAGTCCCGGACTCTACAggtttgttggttagttggttggttggttggttggttagttagttagttagtttgttTTTGTCGCCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCATGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGCGGCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878143 513 + 60714840 GTGTATAATATTCTTAAAGTGCAGGCCGTAGTCCGGTACACCATATTCAGCTGACATGCTTTTGAAAGTGGAGGGGGTAGCACGCCTCACACAAAACTTACCAcagtggttctcaaagtggcatcctggag-ca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-tccaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccaggtgattcttatgctcatggaagtttgagaaccgctgATCAATGGAATCAGTGACTCAGAAACAGAGTCCCGGACTCTACA----------------ggttggttggttggttagttagtttgtt--------tgttTTTGTCACCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCGTGTTATATGTGATAAACCATCCACCCAGAGTAGGATTG------------GGGGCAGCATCTTAACATCTAACTACTTAGGACACTCACCCTGTTTACAGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103363356 516 - 106955855 GCGTATGATATTCTTAAAGTGCAGGCCATAGTCCAGTACACCGTATTCAGCTGAGATGCTTTTGAAAGTGGAGGGGACAGCACACCT-ACACAAAACTTACTGcagtggttctcaaagcggcatcctgg-gcca-tagcatcagcatcacctgggaacttactaggactgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccaggtgattcttatgcccatggaaatttgagaactgctgATCAATGGAATCAGTGACTCAGAAACAGAGTCCCAGACTCTACAggtt------------ggttggttggttggttggttggttggtt--------ggttTTTGTCACCCACATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCTGATTATTCTTCTGCGTGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGTACCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA i nomLeu3.chr10 I 302 C 0 s canFam3.chr1 20079634 433 - 122678785 ATGCCCAAT-TTCTTAAGGCACAGGCTGGTATC-AACACA-TGAAATCAACTGAGGTGCCTTGAAGATGGGAGAAAATG--ATGGCTCACACAAAATTTTGTGcagtccttctcaaagtgacatccccagatcagcagcatcagtgtcacctggaaacttgttaaaaataaacatcactggaccccaccgcataccttctgaatcaggaattattgggatccagag--------tctcagcCACC------------CCCCCCCAATGTTTTTAGAGCCACTGGCCAATGGAATCAGAGACTCAAAAATAGAGTCCAGGAATCTACAATCT------------------------------------------------TAT------------------------------------------AAGTGACTCAGATTATTCTTTTCCACATTAGGCATTATAAACCATGCCCCTAAGGCTGGATAGAAATGGGGATGTAGGGCAGCATAGTAATGTCTAA-TATTT---ATACCCACCTTATTTACAGGCA i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=316862.000000 s hg38.chr19_GL949748v2_alt 1005063 337 + 1064304 GAAATAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAACTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAGAG---AGAAGGGGTCCGTGTACCTCATACGCTGTGCACCAGAATGGACCCTGCAGAACCTACCTGCTACCGGGGAAGGTGGTTCTGTTGGTAACCG---GCTGGGGGTCACAGAGGTTCCTGGgaaatcagaaaatgagataaatctgtgctctgt-cgctgtgggtcctgaacaaataacgaaacat-ctccgtgactgagtttcctcaccggaaaaatgagcctaaagtagcttacatcactggactgttgtggatgttaaT s panTro4.chr19 59937042 337 + 63644993 GAAGTAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAACTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAGAG---AGAAGGGGTCCGTGTACCTCCTACGCTGTGCACCAGAATGGACCCTGCAGAACCTACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACCG---ACTGGGGGTCACAGAGGATCCTGGgaaatcagaaaatgagataaatctgtgctctgt-cgctgtgggtcctgaacaaataaagaaacat-ctccgtgactgagtttcctgacctgaaaaatgagcctaaagtagcttacatcactggactgttgtggatgttaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878656 340 + 60714840 GGAGTAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAAGTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAAAGAGAAGAAGGGGTCCGTGTACCTCATACGCTGTGCACCAGAATGGACCCTGCAGAACTTACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACTG---GCTGGGGGTCACAGAGGTTCCTGGgaaatcagaaaatgagataaatctgtgctctat-cgctgtgggtcctgaacaaataatgaaacat-ctccgtgactgagtttcctcacctgaaaaatgagcctaaaatagcttacatcactggactgttgtggatgttaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103363872 313 - 106955855 G---------------------------ATTTGGGAAAGAACCAAGTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAAAGAAAAGAAGGGGTCCATGTACCTCATATGCTGTGCACCAGAATGGACCCTGCAGAACTAACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACAG---GCTGGGGGTCACGGAGGTTCCTGGgaaatcagaaaatgagataaatccgtgctctgt-cgctgtgggtcctgaacaaataatgaaacat-ctccgtgactgagtttcctcacccgaaaaatgagcctaaagtatcttacatcactggactgttgtggatgttaat i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 33687 329 + 138250 GAAGTGAAGGGTTTTTAAAACAAAGCAAGTTTCTTAAAGAAACAAGTGAGTTAAATTGACAAACCTAGGCAGAAAGGCAAG-----AGAAGGAGTCCATGTGCCTCACACCCCGCGCACCAGAATGGATCTTGCAGAACTTACCTTTGGCAGACGAAGGTGGTTCCGTTGGTAACTGGCTGCTGGGGGTCACAGAGATTCCTGGGAAATCAGAAAATGAGAAAAA----TGCTCTGG-TCATGGGAGTCATCAACAAATACTAAaacat-ctctgtaccctagtttcctcacccgaaaaatgagtctaaagtagcttacatcaatggattgctgtgGATG----- i calJac3.chr22_GL285922_random I 593 C 0 s canFam3.chr1 20080067 339 - 122678785 GAAATCAGTGattttttaaataaattaaatttGTGAAAGAGACAAGTGAATTAAATTGAGAAATCTGGATAAAAGGGGAAAAGAA-AAAAAGGGTCTATGGGTCT-ATATCCCAGACACCAGGATGAACCCTCCAGAATTTACCTGTCACAGAGGAAGGTGGTTCTCTGGATAACAA---ACCGGGGGTCACAGAAGTCCCTGGGAAATCAGAAAAAAAGAGAATTCTGTGCTCTCTGGGCTATGGGTCCTGGGCAAATAATAAAGCACATTCTGCGACCCACTTACCGCACCTAAAAGATGAATCCAAAGAAGCTCACATCG-TAGACTGTCATGGGTGTTAAT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=5765.000000 s hg38.chr19_GL949748v2_alt 1005400 11 + 1064304 AAGCATTTGAg- s panTro4.chr19 59937379 11 + 63644993 AAGCATTTGAg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878996 11 + 60714840 AAGCATTTGag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364185 11 - 106955855 aagtATTTGAg- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 34016 7 + 138250 -----TTTGAgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=1898.000000 s hg38.chr19_GL949748v2_alt 1005411 2 + 1064304 ct s panTro4.chr19 59937390 2 + 63644993 ct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879007 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364196 2 - 106955855 ct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55806886 2 + 59248254 cc i macFas5.chr19 I 953 C 0 s calJac3.chr22_GL285922_random 34023 2 + 138250 cc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e rheMac3.chr19 60664977 893 + 64156825 I a score=21990.000000 s hg38.chr19_GL949748v2_alt 1005413 17 + 1064304 gggtgcagtgcctcatg s panTro4.chr19 59937392 17 + 63644993 gggtgcagtgcctcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879009 17 + 60714840 gggcgcagtgcctcatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364198 17 - 106955855 gggcacagtgcctcacg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60665870 17 + 64156825 gggtgcagtggctcaca i rheMac3.chr19 I 893 C 0 s macFas5.chr19 55806888 17 + 59248254 gggtgcagtggctcaca i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 34025 16 + 138250 aggcgcgg-ggctcaca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C a score=115924.000000 s hg38.chr19_GL949748v2_alt 1005430 56 + 1064304 cctgtaatcccagcactttgggaggctgaggagggcagatcacttgaggtcaggag s panTro4.chr19 59937409 56 + 63644993 cctgtaatcccagcactttgggaggctgaggagggcagatcacttgaggtcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879026 56 + 60714840 cctgtaatcccagcactttgggaggccgaggagggcagatcacttgaggtcaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364215 54 - 106955855 cctgtaatcccagcactttgggaggctgaggcgggcagatca--tgaggtcaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60665887 56 + 64156825 cctgtaatcccagcactctgggaggccgaggtgggcagatcgcctgaggtcaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806905 56 + 59248254 cctgtaatcccagcactctgggaggccgaggtgggcagatcgcctgaggtcaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47618137 51 + 50890351 cctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagag i chlSab2.chr6 I 5309 C 0 s calJac3.chr22_GL285922_random 34041 54 + 138250 cctgtaatcccagcgttttgggaggcagagccaggcaaatc--ccgaggtcaggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e papAnu2.chr19 47914578 0 + 51301725 C a score=9267.000000 s hg38.chr19_GL949748v2_alt 1005486 7 + 1064304 ttcaagc s panTro4.chr19 59937465 7 + 63644993 ttcaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879082 7 + 60714840 ttcaagc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60665943 7 + 64156825 ttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806961 7 + 59248254 ttcaaga i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47618188 7 + 50890351 ttcaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 34095 7 + 138250 ttggaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e nomLeu3.chr10 103364269 0 - 106955855 C e papAnu2.chr19 47914578 0 + 51301725 C a score=996423.000000 s hg38.chr19_GL949748v2_alt 1005493 500 + 1064304 ccagcctggccagtatggtgaaaccccgtctccactaaaaatacaaaaattagccaggcgtggtggtgtgcacctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctaggaggcagaggttgcagtgatctgagatcgcaccactgcactccagcctgggtgacgcagtaagactccatctg-----------------------------------------------------------------aaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagatcacctgaggtcaagagttcaagaccagcctggccaacatggtgaaaccctgtctctacgaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccatctactca--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgaactgagatcactccactgcactccagcctgggtgacaaagtgagac----tccccccaaaaaaa s panTro4.chr19 59937472 501 + 63644993 ccagcctggccagtatggtgaaaccccgtctccactaaaaatacaaaaattagccaggtgtggtggtgcgcacctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctaggaggcagaggttgcagtgatctgagatcacaccactgcactccagcctgggtgacgcagtaagactccatctga----------------------------------------------------------------aaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagatcacctgaggtcaagagttcaagaccagtctggccaacatggtgaaaccctgtctctacgaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccatctactcg--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgaactgagatcactccactgcactccagcctgggtgacaaagtgagac----tctcaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879089 498 + 60714840 ccagcctggccagtatggtgaaaccctgtctccact-aaaatataaaaattagccaggcgtggtggtgtgcacctgtaatcccagctgctcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgcagtgatctgagatcgcaccactgcactccagcctgggcgacgcagtaagactccatctc-----------------------------------------------------------------aaaaaaaaaGGCTTa---------------------gccgggcatggtggctcacacctgtaatcccagcactttgagaggccaaggcaggcagatcacctgaggtcaagagttcaagaccagcctggccaacatggtgaaaccctgtgtctac-aaaaatacaaaaattagctgggcatgatggcgggtgcctgtaatcccatctactcg--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagctgagatcactccactgcactccagcctgggcgacaaagtgagac----tctcaacaaaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60665950 509 + 64156825 ccagcctggccaaggtggtgaaa-cccgtctctatcaaaaatacaaaaattagccaggcattgtggcatgcacctgtagccccacctacttgggaggctgaggcaggagaaacgcttgaacctgggaggcagaggttgctgtgagccaagatcccaccactgcactccagcctgggcgatgcggtaaga--ctatctcaaaaaaaagtaaaag-----------------------------------------------aaaaaaaaagaaGGCTCA---------------------gccaggcgtggtggctcacacctgtaatcccagcccttt-----gcggaggcaggcggatcacctgaggccaagagttcaagaccagcctggccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactca--------------------------------------ggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgctgtgagccaagatcacaccactgcactccagtctgggtgacagagcgagac----tctcaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806968 511 + 59248254 ccagcctggccaaggtggtgaaa-cccgtctctatcaaaaatacaaaaattagccaggcattgtggcacgcacctgtagtcccacctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgccgtgagccaagatcacaccactgcactccagcctgggcgatgcagtaagactctatctcaaaaaaaaataaaag-----------------------------------------------aaaaaaaaagaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcaggcggatcacctgaggccaagagttcaagaccagcctggccaacatggtgaaaccccatatctac-aaaaatacaaacattagctgggcatgatggcaggtgcctgtaatcccagctactca--------------------------------------ggaggctgaggcagcagaatcgcttaaacccgggaggtgcaggttgcagtgagccgagatcacaccactgcactccagtctgggtgacagagcgagac----tctcaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47914578 497 + 51301725 ccagcctggccaaggtggtgaaa-cccgtctctatcgaaaatacaaaaattagccaggcattgtggcatgcacctgtagtcccacctacttgggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatctcaccactgcactccagcctgggcgatgcagtaagactccatctca-------------------------------------------------------------aaaaaaaaagaaggctta---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagagttcaagaccagcctgaccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactcg--------------------------------------ggaggctgaggcagcagaatcgcttaaacccgggaggtgcaggttgcagtgagctgagatcacaccactacactccagtctgggtgacagagcaagac----tctcaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618195 551 + 50890351 ccagcctgtccaacatggtgaaaccccatatcta-caaaaatacaaaaattagctgagcatgatggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcgatgcaataagactccatctcaaaaaaaaaaaaaag---------------------------------------------aagaaaaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagagttcaagaccagcctgtccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgagcatgatggcaggtgcctgtaatcccagctactcgggaggctgaggcgggggaatcgcttaaacccgggaggtggaggctgaggcagcagaatcgcttaaacccaggaggtgcaggttgcagtgagccgagatcacaccactacactccagtctgggtgacagagcaagac----tctcaaaaaaaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 34102 574 + 138250 ccatcctggccaatatggtaaaatcccatctctactaaaaatacaaaaattagccaggcatggtggcaggcatctgtagtctcagctactctggaggctgaggcaggagaaacgcttgaacctgggagacggaggctgcagtgagcagagatcatgctattgcattccagccttggccacagagcaagactccgtctcaaaaaaaaaaaaaaaTCAAAGccatcgttaataataatgcattgtatatttcaaaattcctaaaacagtaaacattcttactacaaagaaattataagatggtgaggtgtagtgactcatgcctgtaatcccaacacttt------cagaggcaggaggctcacttgagcccaggagttcaagaccagcctgggcaacatgg-gaaactccatctctacaaaaaatacaaaaa-tagccgggcatgatggtgcccacctgtagtcccagctactag--------------------------------------ggaggctgtggtgggaggatcac-agaacctgggaggcagaggctgcactgaaccaagatcaaaccactgcgctccatcctgggtgac----cgagaccctgtcccaaaaaaa--- i calJac3.chr22_GL285922_random C 0 I 448 e canFam3.chr1 20080406 0 - 122678785 C e nomLeu3.chr10 103364269 0 - 106955855 C a score=14435.000000 s hg38.chr19_GL949748v2_alt 1005993 31 + 1064304 aaaaaaaaaaaaaa---aGCAGCAGCATTTGTAA s panTro4.chr19 59937973 34 + 63644993 aaaaaaaaaaaaaaaGCAGCAGCAGCATTTGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879587 22 + 60714840 gagga------------agaaGCAGCATTTGCAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666459 18 + 64156825 aaaaaaa----------------aGCATTTGTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807479 21 + 59248254 aaaaaaa-------------GGCAGCATTTGTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915075 18 + 51301725 caaaggc----------------agcATTTGTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618746 26 + 50890351 aaaaaaaaa--------aaaGGCAGCATTTGTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=262604.000000 s hg38.chr19_GL949748v2_alt 1006024 137 + 1064304 AGCACACCTGGCACATTCTGGGCTA-TTAACAAGGAAATGC-ATGCAGCTCCCGT-CCACCTTTTTCAACCTCAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT s panTro4.chr19 59938007 137 + 63644993 AGCACACCTGGCACATTCTGGGCTA-TTAACAAGGAAATGC-ATGCAGCTCCCGT-CCGCCTTTTTCAACCTCAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879609 138 + 60714840 AGTACACCTGGCACATTCTGGGATA-TTAACAAGGAAATGC-ATGCAGTTCCCATCCCTCCTTTTTCGACCTCAGTTCTGT---TTCTTCTGGATTTCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666477 143 + 64156825 AGCATACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGCAACTCCTGTCCGTCCTTTTTGAACCTCAGTTCTATTTCTTCTTCTGGATTCTTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807500 143 + 59248254 AGCACACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGCAACTCCTGTCCGTCCTTTTTGAACCTCAGTTCTATTTCTTCTTCTGGATTCTTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915093 143 + 51301725 AGCACACCTGGCACATTCTGGGATATTTAACAAGGAAATGC-ATGTAACTCCTGTCCCTCCTTTTTGAACCTcagttctgtttcttcttctggaTTCCTGGGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618772 140 + 50890351 AGCACACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGTAACTCCTGTCCCTCCTTTTTGAACCTGAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACTCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20080406 140 - 122678785 AGCACACCTAGCACATTCTGGACTAGTTTATATCGACAGGCTTTATAGCTGCC-TCCCTGCTTTTCGAACCTCAGCTCTGC--CCTTTTCTAGATCTCTGTGACCTGCACCTTACATTGCCCCTAGTAGCAAAACTGGCTCTT- i canFam3.chr1 C 0 I 5509 e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=58626.000000 s hg38.chr19_GL949748v2_alt 1006161 34 + 1064304 CTACC-AAAAACTAAATGATGTATTTTGTTTGATT s panTro4.chr19 59938144 34 + 63644993 CTACC-AAAAACTAAATTATGTATTTTGTTTGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879747 34 + 60714840 CTACC-AGACACTAAATGATGTATTTTGTTTGATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666620 35 + 64156825 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807643 35 + 59248254 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i macFas5.chr19 C 0 I 512 s papAnu2.chr19 47915236 35 + 51301725 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618912 35 + 50890351 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=17577.000000 s hg38.chr19_GL949748v2_alt 1006195 9 + 1064304 TAATATGAc s panTro4.chr19 59938178 9 + 63644993 TAATATGAc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879781 9 + 60714840 TAATATGAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666655 9 + 64156825 TAATATGAC i rheMac3.chr19 C 0 I 336 s macFas5.chr19 55808190 9 + 59248254 TAATATGAc i macFas5.chr19 I 512 C 0 s papAnu2.chr19 47915271 9 + 51301725 TAATATGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618947 9 + 50890351 TAATATGAc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=-3977.000000 s hg38.chr19_GL949748v2_alt 1006204 1 + 1064304 -a s panTro4.chr19 59938187 1 + 63644993 -a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879790 1 + 60714840 -C i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55808199 1 + 59248254 g- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915280 1 + 51301725 G- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618956 1 + 50890351 g- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C e rheMac3.chr19 60666664 336 + 64156825 I a score=388638.000000 s hg38.chr19_GL949748v2_alt 1006205 233 + 1064304 ttgttaaatgtactgatcagtggcgttgggtatgttcacattgtggtacaatatgttgacctctagaacttatttttcttgcaaaactgaaattctgtgcccattaaacactaattccttctctctcctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagatacctcctttgactagaatcat-acagtagttgtccttttg----tgactg s panTro4.chr19 59938188 237 + 63644993 ttgttaaatgtactgatcagtggcgttgggtatgttcacactgtggtacaatatgttgacctctagaacttatttttcttgcaaaactgaaattctgtgcccattaaacactaattccttctctctcctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagataccttctttgagtagaatcat-acagtagttgtccttttgtgactgactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879791 233 + 60714840 TGGttaagtgtgctcatccgtggcgttgggtatgttcacactgtggtacaacgtgttgacctctaaaacgtatttttcttgcaaaactgaaactctgtgcctattaaacactaattccttctctcccctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagataccgcctttgagtagaatcat-acactagttgtccttttg----tgactg i ponAbe2.chr19 C 0 I 4084 s rheMac3.chr19 60667000 234 + 64156825 ttgttaagtgtactgaccagtggcattgggtatgttcacattgtggtacaatatgttgacctctagaagttatttttcttgcaaaactgaaactctatgcccattaaacactaattcctgctctcccctctttctggcccttaacaaccaccgttgtactttgtgtttctataattttgacattagatacctcctttgagtagaatcataatagtagttgtcctttta----tgactg i rheMac3.chr19 I 336 I 9 s macFas5.chr19 55808200 234 + 59248254 ttgttaagtgtactgaccagtggcattgggtatgttcacattgtggtacaatatgttgacctctagaagctatttttcctgcaaaagtgaaactctatgcccattaaacactaattcctgctctcccctctttctgtcccttaacaaccaccgttgtactttgtgtttctataattttgacattagatacctcctttgagtagaatcataatagtagttgtcctttta----tgactg i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47915281 233 + 51301725 TTGTTAAGTGTACTGACCAGTGGCATTGGGTATGTTCACATTGTGGTACAATATGTTGACCTCTAGAAGCTATttttcttgcaaaactgaaactctatgcccATTAAACACTCATTCCTGCTCTCCCCTCTTTCTGGCCCTTAACAACCACCGTTGTACTTTGTGTTTCTACAATTTTGACATTAGATACCTCCTTTGAGTAGAATCAT-ATAGTAGTTGTCCTTTTA----tgactg i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47618957 214 + 50890351 ttgttaagtgcactgaccagtggcattgggtatgttcacattgtggtacaatat-----------gaagttattttttttgcaaaactgaaactctatgcccattaaacactaattcctgctctcccctctttctggcccttaacaaca--------attttgtgtttctacaattttgacattagatacctcctttgagtagaatcat-acagtagttgtccttttg----tgactg i chlSab2.chr6 C 0 I 9 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=273542.000000 s hg38.chr19_GL949748v2_alt 1006438 155 + 1064304 acttagcataatgtcctcaaggtatatccatgttgtagtatgtgtcagaatttccttcttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTTTTTTGAAAGAAACCCCCTTTAAGAATGGTAGTC s panTro4.chr19 59938425 155 + 63644993 acttagcataatgtcctcaaggtatatccatgttgtagtctgtgtcagaatttccttcttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884108 152 + 60714840 acttagcataatgtcctcaagataaatccatgttgtagtatgtgtcagaatttc---cttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTCTTTTGAGAGAAACCCCCTTTAAGAATGGTAGCC i ponAbe2.chr19 I 4084 C 0 s rheMac3.chr19 60667243 224 + 64156825 acttagcataatgttctcaaggtatatccatgttgtagtatatgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgtatataaccacattGTTATACACATGTGGTATGTGTATAACCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i rheMac3.chr19 I 9 C 0 s macFas5.chr19 55808443 224 + 59248254 acttagcataatgttctcaaggtatatccatgttgtagtatatgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgtatataaccacattgttatatacatGTGGTATGTGTATAACCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACTCCCTTTAAGAATGGTAGCC i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47915523 191 + 51301725 acttagcataatgttctcaaggtatatccatgttgtagtatgtgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgta---------------------------------tataaCCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i papAnu2.chr19 I 9 C 0 s chlSab2.chr6 47619180 205 + 50890351 acttagcataatgtcctcaaggtaaatccatgttgtagtaggtgtcagaatttccttcttttttaaggttgcgtaatattccattgcatgtatataaccacattgttatatacatGTGGTATGTATATAACCAC-------------------ATGTATATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACTCCCTTTAAGAATGGTAGCC i chlSab2.chr6 I 9 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=168449.000000 s hg38.chr19_GL949748v2_alt 1006593 73 + 1064304 AAGTCCgacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca--tgaggtc---ag s panTro4.chr19 59938580 76 + 63644993 AAggccgacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca--tgaggtcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884260 76 + 60714840 AAggccggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatca--tgaggtcaggag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60667467 76 + 64156825 AAGGCTggcacggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55808667 76 + 59248254 AAGGCTggcacggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915714 76 + 51301725 AAGgctggcacggtggttcacgcctgtaatcccagcactttgggaggctgagacaggcagatca--tgaggtcaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619385 76 + 50890351 AAGTCTggcatggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcagaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35124 75 + 138250 Aggccaggtgcggtggctcacgcctgcactcccagcactttgggaggttgaggcaggcagatcacctgaggtcag--- i calJac3.chr22_GL285922_random I 448 I 3 e canFam3.chr1 20080546 5509 - 122678785 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=633731.000000 s hg38.chr19_GL949748v2_alt 1006666 215 + 1064304 ttcaagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaaattggccgggcatggtggcaggcacctgtaattccagctactcgagaggctgaggcagcagaatcgcttgaacccggaaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagtgagacttcgtc----aaaaaaaaaaaa s panTro4.chr19 59938656 217 + 63644993 ttcaagaccagcctgaccaacatagtgaaaccctgtctctactaaaaatacaaaaattggccgggcatggtggcaggcacctgtaattccagctactcgagaggctgaggcaggaggatcgcttgaacccggaaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagagtgagacttagtc--aaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884336 213 + 60714840 ttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaagttagccgggcatggtggcaggcacctgtaatcccagctactcgagaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatagtgccactgcactccagcctgggtgac--agtgagacctcgtc----aaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364269 218 - 106955855 ttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaa-ttagccgggcatggtggcaggcacctgtcatcccagctactcgagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttacagtgagctgagatcgcaccactgcactccagcctgggtgacagagtgagacctcgtcaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667543 215 + 64156825 ttcgagaccagcatgacccacagagtgaaaccccgtctctactaaaaatacaaaaatgagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggagccagaagttgcagtgagctgagatcgccccatagcgctccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i rheMac3.chr19 C 0 I 35 s macFas5.chr19 55808743 215 + 59248254 ttcgagaccagcctgacccacagagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgccccatagcactccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47915790 215 + 51301725 ttcgagaccagcctgacccacagagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgccccacagcactccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47619461 213 + 50890351 ttcgagatcagcctgacccac--ggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacctgggagacggaggttgcagtgagctgagatcgccccactgcactccagcctgggtgacagagtaagacttcatc----aaaaaagaaaag i chlSab2.chr6 C 0 I 2 s calJac3.chr22_GL285922_random 35202 215 + 138250 ttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgagtgtggtggcgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctagatgatagagtgagactccatc----aaaaaaaggaaa i calJac3.chr22_GL285922_random I 3 C 0 e canFam3.chr1 20080546 5509 - 122678785 I a score=52134.000000 s hg38.chr19_GL949748v2_alt 1006881 24 + 1064304 aagaaaCCTCCATTCTCCCAGCTG s panTro4.chr19 59938873 24 + 63644993 aagaaaCCTCCATTCTCCCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884549 24 + 60714840 aagaaaCCTCCGTTCTCCCAGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364487 24 - 106955855 aagaaaCCTCTATTCTCCCAGCTG i nomLeu3.chr10 C 0 I 54 s macFas5.chr19 55808969 24 + 59248254 aagaaaCCTCCATCCTCCCAGATG i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47916016 24 + 51301725 aagaaacctccaTCCTCCCAGCTG i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47619676 24 + 50890351 aagaaaCCTCCATCCTCCCAGATG i chlSab2.chr6 I 2 C 0 s calJac3.chr22_GL285922_random 35417 19 + 138250 -----aCCTACATCCTCCCAGCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e rheMac3.chr19 60667758 35 + 64156825 I a score=5865.000000 s hg38.chr19_GL949748v2_alt 1006905 4 + 1064304 CCTG s panTro4.chr19 59938897 4 + 63644993 CCTG i panTro4.chr19 C 0 I 54 s nomLeu3.chr10 103364565 4 - 106955855 CCTG i nomLeu3.chr10 I 54 C 0 s macFas5.chr19 55808993 4 + 59248254 CCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916040 4 + 51301725 CCTG i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35436 4 + 138250 CCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e rheMac3.chr19 60667758 35 + 64156825 I a score=43445.000000 s hg38.chr19_GL949748v2_alt 1006909 38 + 1064304 TAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACC s panTro4.chr19 59938955 38 + 63644993 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACT i panTro4.chr19 I 54 C 0 s nomLeu3.chr10 103364569 38 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55808997 38 + 59248254 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACC i macFas5.chr19 C 0 T 42 s papAnu2.chr19 47916044 38 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35440 38 + 138250 AAGCCTGGGGCTTCCTGCCCTCTCGTTTCCTTTGCACC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e rheMac3.chr19 60667758 35 + 64156825 I a score=7133.000000 s hg38.chr19_GL949748v2_alt 1006947 11 + 1064304 TCTGGCCCCGC s panTro4.chr19 59938993 11 + 63644993 TATGGCCCCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364607 11 - 106955855 TATGGCCCCTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916082 11 + 51301725 TATGGCCCCTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35478 11 + 138250 CAGGGCCCCAC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 1006958 1 + 1064304 C s panTro4.chr19 59939004 1 + 63644993 C i panTro4.chr19 C 0 T 108 s nomLeu3.chr10 103364618 1 - 106955855 C i nomLeu3.chr10 C 0 T 108 s papAnu2.chr19 47916093 1 + 51301725 C i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=1746.000000 s hg38.chr19_GL949748v2_alt 1006959 3 + 1064304 CCT s panTro4.chr19 59938897 3 + 63644993 CCT i panTro4.chr19 T 108 C 0 s nomLeu3.chr10 103364511 3 - 106955855 CCT i nomLeu3.chr10 T 108 C 0 s papAnu2.chr19 47916094 3 + 51301725 CCT i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=27381.000000 s hg38.chr19_GL949748v2_alt 1006962 51 + 1064304 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938900 51 + 63644993 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364514 51 - 106955855 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916043 51 + 51301725 GCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=29127.000000 s hg38.chr19_GL949748v2_alt 1007013 54 + 1064304 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 T 54 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=29127.000000 s hg38.chr19_GL949748v2_alt 1007067 54 + 1064304 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=28734.000000 s hg38.chr19_GL949748v2_alt 1007121 54 + 1064304 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938951 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACTTATGGCCCCTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=26564.000000 s hg38.chr19_GL949748v2_alt 1007175 51 + 1064304 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCC s panTro4.chr19 59939005 51 + 63644993 CCTGCAGCCCAGGGCTTCCTGCTCTCCCACTTCCTTCCCACTTACGGCCCC i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364565 51 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTACTTATGGCCCC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916040 51 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCC i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2484.000000 s hg38.chr19_GL949748v2_alt 1007226 6 + 1064304 GCCCCT s panTro4.chr19 59939002 6 + 63644993 TCCCCT i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364616 6 - 106955855 TCCCTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916091 6 + 51301725 TCCCCT i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 1007232 1 + 1064304 G s panTro4.chr19 59939008 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364622 1 - 106955855 G i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916043 1 + 51301725 G i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=19392.000000 s hg38.chr19_GL949748v2_alt 1007233 37 + 1064304 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCAC s panTro4.chr19 59939009 37 + 63644993 CAGCCCAGGGCTTCCTGCTCTCCCACTTCCTTCCCAC i panTro4.chr19 C 0 T 149 s nomLeu3.chr10 103364569 37 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTAC i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916044 37 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCAC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2260.000000 s hg38.chr19_GL949748v2_alt 1007270 13 + 1064304 CTCTGGCGCCGCC s nomLeu3.chr10 103364606 13 - 106955855 TTATGGCCCCTCC i nomLeu3.chr10 C 0 T 108 s papAnu2.chr19 47916081 13 + 51301725 CTATGGCCCCTCC i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I e panTro4.chr19 59939046 149 + 63644993 T a score=28425.000000 s hg38.chr19_GL949748v2_alt 1007283 54 + 1064304 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCTTTCCCACCTATGGCCGCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 149 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 108 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=1953.000000 s hg38.chr19_GL949748v2_alt 1007337 4 + 1064304 CCTA s panTro4.chr19 59938951 4 + 63644993 CCTG i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364511 4 - 106955855 CCTG i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 4 + 51301725 CCTG i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=26781.000000 s hg38.chr19_GL949748v2_alt 1007341 50 + 1064304 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938901 50 + 63644993 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364515 50 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916044 50 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=27534.000000 s hg38.chr19_GL949748v2_alt 1007391 52 + 1064304 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCG s panTro4.chr19 59938951 52 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACTTATGGCCCCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364511 52 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCT i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 52 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCT i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2000.000000 s hg38.chr19_GL949748v2_alt 1007443 2 + 1064304 CC s panTro4.chr19 59939003 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364563 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916092 2 + 51301725 CC i papAnu2.chr19 C 0 T 54 s canFam3.chr1 20086055 2 - 122678785 CC i canFam3.chr1 I 5509 C 0 e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=113569.000000 s hg38.chr19_GL949748v2_alt 1007445 42 + 1064304 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCCACT s panTro4.chr19 59939005 42 + 63644993 CCTGCAGCCCAGGGCT--TCCTGCTCTCCCACTTCCTTCCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884573 42 + 60714840 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364565 42 - 106955855 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCTACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667793 42 + 64156825 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCTACC i rheMac3.chr19 I 35 C 0 s macFas5.chr19 55808993 42 + 59248254 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCCACC i macFas5.chr19 T 42 C 0 s papAnu2.chr19 47916040 42 + 51301725 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCCACC i papAnu2.chr19 T 54 C 0 s chlSab2.chr6 47619700 42 + 50890351 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACTTCCTCCCCACC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086057 44 - 122678785 TCCAAAGCCTCAGGCTTCTCCTCGCCTCCCACCCCCTTCACACC i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C a score=2548.000000 s hg38.chr19_GL949748v2_alt 1007487 1 + 1064304 T s panTro4.chr19 59939047 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884615 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364607 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667835 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47916082 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619742 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086101 1 - 122678785 T i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C e macFas5.chr19 55809035 0 + 59248254 C a score=25753.000000 s hg38.chr19_GL949748v2_alt 1007488 9 + 1064304 -ATGGCCCCT s panTro4.chr19 59939048 9 + 63644993 -ACGGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884616 9 + 60714840 -ACGGCCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364608 9 - 106955855 -ATGGCCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667836 9 + 64156825 -ATGGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809035 9 + 59248254 -ATGGCCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916083 9 + 51301725 -ATGGCCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619743 9 + 50890351 -ATGGCCCCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086102 10 - 122678785 GTTGGCCCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C a score=15792.000000 s hg38.chr19_GL949748v2_alt 1007497 5 + 1064304 CCCTT s panTro4.chr19 59939057 5 + 63644993 CCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884625 5 + 60714840 CCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364617 5 - 106955855 CCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667845 5 + 64156825 CCCCT i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55809044 5 + 59248254 CCCCT i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47916092 5 + 51301725 CCCCT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47619752 5 + 50890351 CACTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35489 5 + 138250 CCCTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20086112 5 - 122678785 CCCCT i canFam3.chr1 C 0 C 0 a score=2106978.000000 s hg38.chr19_GL949748v2_alt 1007502 651 + 1064304 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACTACCCCTACCTGTGACCACAAGCTCCAGGGGGTCGCTGGGGGCTGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGAAAACTAGCCCTGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGACGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGTTTGGCAAAAACTCCTGGGAGAAAAAG-AAAGTCTGATGTTGAAGGCAGGAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGCTTTTT-----------------GGCTGTATCCCTCCCAGAGAGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTCGAGTC-ACCCAGTGGTTGAGGAAG-GAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttctgccttcaggggcctggtggccctggagacaaatct--ccctctgtatctgagcctcactgccttgttctgttaaaatggggatgactg s panTro4.chr19 59939062 629 + 63644993 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACTACCCCTACCTGTGACCACAAGCTCCAGGGGGTCGCTGGGGGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGAGGACACCGCCGGGCTGGGCTGGGCTGAGAGCGAGGGTTTGGCAAAAACTCCTGGGAGAAAAAT-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGCTT---------------------------------------AGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTCGAGTC-ACCCAGTGGTTGAGGAAG-GAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttctgcctgtaggggcctggtggccctggagacaaatct--ccctccgtatctgagcctcgctgccttgttctgttaaaatggggatgactg i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56884630 653 + 60714840 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCACGAGCTCCAGGGGGTCACTGGGGGCCGACCACAGGTATGGGTCCCCACTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGAGTTACGTCCCCTCCTGAGGACACCGCTGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGGAAAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGGGCTGGGGAGCTTTTT-----------------GGCTGTATCCCTCCCAGAGAGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTGAGGTTGAGGAAGTGGTTGAGGAAGCGAGGCTGT--GCTCACGTCCTAGTGcttgggtgaaaatcctagttctgcctttaagggcctggt-gccctggagacaaatct--ccctctgtatctgagcctcactgccttgttctgttaaaatggggatgaCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364622 651 - 106955855 GGAATGGCCATCAGGACCTATAAAGTCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCAGGAGCTCCAGGGGGTCGCTGGGGGCCGACCACAGGTATGGGTTCCCGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACTGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGAATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCTTCCTGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGAGGACACCGCCGGGCCTGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGGCTGATGTTAATGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGGTTTTT-----------------GGCCGTATCCCTCCCAGAGAGTGCACTCCCCCACCCA--AGCT--CACAGACAGGTCGGGTC-ACCGAGTGGTTGAGGAAGCGAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttgtgcctttaagggcctggtggccctggagacaaatct--ccctctgtgtctgagcctcactgccttg-tctgttaaaatgggggtgactg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667851 664 + 64156825 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAACAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCCGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAAAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TCAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCTGGCTGTATCCCTCCCAGGGCTGTATCCCTCCCAGACAGCACACTCCCCCACCCA--AGCTCACACAGAGAGGTCAAG-C-ACCAagtggttgaggaagcgaggctgtgtgcccacatcctagtgcctgggtgcgaatcctggttctgcctttaa-------gtggccccggagacaaatct---cctctgtatctgagcctcactgccttgttctgctaaaatggggatgatcg i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55809050 645 + 59248254 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAACAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCCGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TCAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCCTCCCAGACAGCACACTCCCCCACCCA--AGCT--CACAGAGAGGTCAAG-C-ACCAagtggttgaggaagcgaggctgtgtgcccacatcctagtgcctgggtgcgaatcctggttctgcctttaa-------gtggccccggagacaaatct---cctctgtatctgagcctcactgccttgttctgctaaaatggggatgatcg i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47916098 647 + 51301725 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGACGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCCTCCCAGACCGCACACTCCCCCACCCA--AGCT--CACAGAGAGGTCAAGTC-ACCGAGTGGTTGAGGAAGCGGGGCTGTGCGCTCACATCCTAGTGCCTGGGtgcaaatcctggttctgccttTAA-------GTGGCCCCGGAGACAAATCT--CCCTCTGTGTCTGAGCCTCAGTGCCTTGTTCTGCTAAAACGGGGATGATCG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47619757 646 + 50890351 CGAATGGCCCTCAGGACCTACAAAGGCTGAGGAAGACAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCGTCTCAGC--TGAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCGTCCCAGACAGCGCACTCCCCCAGCCA--AGCT--CACAGAGAGGTCAAG-C-ACCGAGCGGTTGAGGAAGCGAGGCTGTGTGCCCACATTCTAGTGcctgggtgcgaatcccggttctgcctttaa-------gtggccccggagacaaatct--ccctctgtgtctgagcctcagtgccttgttctgctaaaatggggatgatcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35494 637 + 138250 GGAATGGCTATCAGGACCTAAAAAGGTTGAGGAAGAAAGGTTTGGTCTGCAACACCCCTACCTGTGACCACGAGCTCCAGGGGATCACTGGGGGCCGACCACAGGTATGGGGCCCTTCTGGAGAAGCTGTAGCAGCGGTAGGTCCCGCTGTGGGCAGCGGTTACCGTGGTGATGGGGAAGCTAGCCCGGTACCATCTCTCGGGGTTCCTGTAGGGTCCAGGGTCGCCGTCCTTGTACAGAGCAAATTGGTCAAAGCCATATTTGGTCTGACACCGTAGGGTCACATCCCCTCCTGGGGACACTGCCGGGCCAGGCTGGGCTGAGAGCGAGGGCTTAGGAAAAACTCCTGGGAGAAAAGG--AAGTCTGGTGTTAAAGGCG------AGTATCTCAGC--TGGGGCT-GGGAGGTCCCCCCGCCTGCCCAA--GCTGGGGAGCTTTAT-----------------GGCTGTATCCCTCCCAG--AGTGCACTCCCTTGCCCC--AGCT--CAGAGAGAGGTCAAGTC-A-TGAATGGTTTACAGAGTGAGGCTGT--GCCCACATCCTAGTGctt-ggtgcaaaccctggttctgcccttaggggcta-gtggccctggagaccaatct--ccctctgtatctgagcctcactaccttgttttgttaaagtggggatgattg i calJac3.chr22_GL285922_random C 0 I 661 s canFam3.chr1 20086117 615 - 122678785 GGAACTTCCACCAGAGTATGCAAGAGCTGAAGAAGAAAGGCTTGGACTGCATCTCCCTCACCTGTTACCACAAGCTCCAGGGGGTCGCTGGGGGCTGACCACAGGTACGGGAACTTGCTGGAAAAGCTATAGCATCGGTAGATCCCACTGTGGGCAACAGTCACTGCGGTGATGGGGAAATTGGCCCAGTACTGTTCTGCAGATTGCTTGTGGGGCTCAGTGTCCCCCTCCTTGTACAGAGCGAATTGGTCAAAACTGTATTTACTCTGACATCGTAGAGTGACATCCCCTCCTTGGGACACAGCCAGGCTGGGCTGGGCTGAGAGTGAGGGCTTAGCATAAACTCCTGGTTGAAAAGA-GAGCTCTGGTGTTAAAGACCATGGAAAGTGTGTTGACCATGGGGGTAGGAAGATTCCCCCCACCTCCTAAGAGCTAGGAAACTCTTC-----------------AGGTATATCCCTTCTAGAGAACCCACTCACCCTGCTACCAACT--CACAAAAGGGT-----T-A----------AAGGGAGCATGACCAA--GATCATATCACAGTTCCCAGGCTCAAAT----------CGCTTAGGGGCTGTGTGATCCTGGAGATAAACCTACCCCTCTATCTGTGTGCCTCAGTGTTCTTTACTG------------------ i canFam3.chr1 C 0 C 0 a score=126354.000000 s hg38.chr19_GL949748v2_alt 1008153 56 + 1064304 aatgagacagtacacagtaa----tttgcagag-tgcctgttgcctag-caagcgctg------------gagt s panTro4.chr19 59939692 52 + 63644993 aatgagacagtacacagtaa----tttgcagag-tgcccgttgcctag-caggcgctg---------------- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56885283 69 + 60714840 AATGAGACAGTACACAGTAA----TTTGCAGAG-TGCCTGTTGCCTAGCCAAGCCCTGGAAATAAGACGGGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365273 56 - 106955855 aatgagacagtacacagtaa----tttgcagag-tgcctgttgcctag-caagcactg------------gagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668515 72 + 64156825 aacgagacagtacacagtaagcatttagcagag-tgcctgttgcctag-caagcgcttgaaatgagatgggagT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809695 72 + 59248254 aacgagacagtacacagtaagcatttagcagag-tgcctgttgcctag-caagcgcttgaaatgagatgggagT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916745 72 + 51301725 AACGAGACAGTACACAGTAAGCATTTAGCAGAG-TGCCTGTTGCCTAG-CAAGCGCTTGAAATGAGATGGGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620403 72 + 50890351 aacgagacagtacaccgtaagcatttagcagag-tgcctgttgcctag-cgagcgcttgaaatgagatgggagT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086732 59 - 122678785 AATGAAACAA--------------CTAACAGAGTTGCCTAATGCATAG-GGAGCTCCCAAACTATGATGGTagt i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36131 661 + 138250 I a score=155781.000000 s hg38.chr19_GL949748v2_alt 1008209 55 + 1064304 aagtaaatagctTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT s panTro4.chr19 59939744 55 + 63644993 aagtaaatagCTTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885352 55 + 60714840 AAGTAAATAGCTTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365329 55 - 106955855 aaataaatagctTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668587 55 + 64156825 ACGTAAACAGCTTAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809767 55 + 59248254 ACGTAAACAGCTGAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916817 55 + 51301725 AAGTAAACAGCTTAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620475 55 + 50890351 AAGTAAACAGCTTGAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36792 55 + 138250 aaaaaaaGAGCTTAAGCTTAGGCTGTG--CCGGAAGCTTACACTGCAGCATGCGATC i calJac3.chr22_GL285922_random I 661 C 0 s canFam3.chr1 20086791 57 - 122678785 aacaaaatagcttaatattttaatgcaatttttaaaccaaaattaatgcaaataatt i canFam3.chr1 C 0 I 689 a score=247665.000000 s hg38.chr19_GL949748v2_alt 1008264 92 + 1064304 GTTACGTTGTAAATGTGGCTGACAGTGCTAGCTTCCGGGTGCCttccaaacttatgatgtatatcagttcagtgaatcct--cagagacctatg s panTro4.chr19 59939799 92 + 63644993 GTTACATTGTAAATGTGGCTGACAGTGCCAGCTTCCGGGTGCCttccaaactcatgatatatatcagttcggtgaatcct--cagagacctatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885407 92 + 60714840 GTTACATTGTAAACGTGGCTGACAGTGCCAGCTTCCGGGTGCCttccaaactcatgatgtatatcagttcagtgaatcct--cagagacctatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365384 92 - 106955855 GTTACGTTGTTAACGTGGCTGACAGTGCCAGCTTCCTGGTGCCttccaaactcatgatgtgtatcagttcagtgaaccct--cagagacctatt i nomLeu3.chr10 C 0 I 323 s rheMac3.chr19 60668642 91 + 64156825 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCttccgaactcatgacgcacatcagttcagtgaatcct--cagagacctgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809822 91 + 59248254 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCttccgaactcatgacgcacatcagttcagtgaatcct--cagagacctgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916872 91 + 51301725 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCTTCCAAACTCATGACGTACATCAGTTCAGTGAATCCT--CAGAGACCTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620530 91 + 50890351 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCCGGGTGCCttccgaactcatgccgtacatcagttcagtgaatcct--cagagacctgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36847 94 + 138250 ATTCCATCGCAAACGTGGGTGAAAGTGCCAGCTTccaggtgccttccaaactcaggacatgtatcaattcagtgaatcctcacagatacctaca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I a score=121802.000000 s hg38.chr19_GL949748v2_alt 1008356 40 + 1064304 gagtcctcactcttaatgtccctattttataaatgaaact s panTro4.chr19 59939891 40 + 63644993 gagtcctcactgttaatgtccctattttataaatgaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885499 40 + 60714840 gagtcttcactcttaatgtccctattttataaatgaaact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365799 40 - 106955855 gagtcctcactcttaaagtccctattttataaatgaaact i nomLeu3.chr10 I 323 C 0 s rheMac3.chr19 60668733 40 + 64156825 gagtcctcactcttaatgtccctattttataaatgaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809913 40 + 59248254 gagtcctcactcttaacgtccctattttataaatgaaact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916963 40 + 51301725 GAATCCTCACTCTTAacatccctattttataaatgaaact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620621 40 + 50890351 gagtcctcactcttaacgtccctattttataaatgaaact i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36941 40 + 138250 aggtcatcactattaatgtccctattttataaatgaAACT i calJac3.chr22_GL285922_random C 0 I 3745 e canFam3.chr1 20086848 689 - 122678785 I a score=530837.000000 s hg38.chr19_GL949748v2_alt 1008396 247 + 1064304 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtacagctgaaatttgctaagagggtagattataagtattctcacacacaa---aaaagttaactgtgtcaggtgatgtatgttaattagcttgctag-tagtaactgtctcacagtggattcgtatatcaaaacatcaacttgtacaccttggatatattccatttttgtttttcaattatacctcaacaaagctgga s panTro4.chr19 59939931 243 + 63644993 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtgcagctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtcaggtgatgtatgttaattagcttgctag-tggtaactgtctcacagtggattcgtatatcaaaacatcaacttctacaccttggatatattccatt----tttttcaattatacctcaacaaagctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885539 248 + 60714840 aaggcacatggcattaaataatttgtccaactctgggtaacaatactgcagtgtacacctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtgaggtgatgtatgctaattagcttgctagttggtggttgtctcacagtggattcgtatatcaaaacatcaacttgtatgccttggatatattccatttttgtttttcaattatacctcaacaaaactgga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365839 247 - 106955855 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtacacctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtgaggtgatgtgtgttaattagcttgctag-tggtaactgtctcaccgtggattcgtatatcaaaacatcaacttgtacaccttggatatattccatttttatttttcaattatatctcaacaaagctgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668773 240 + 64156825 aaggcacatggcgtt----aatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagattataagtgttctcacactcaaaagaaaagttaactgtgcgaggtgatgtatgttaattagcttgctcg-tggtaactgtctcacagtggatacgtacatcaaaaca------tgtatgccttggatatgttccatttttgtttttcaattataactcaacaaacctgga i rheMac3.chr19 C 0 I 325 s macFas5.chr19 55809953 240 + 59248254 aaggcacatggcgtt----aatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagattataagtgttctcacactcaaaagaaaagttaactgtgcaaggtgatgtatgttaattagcttgctcg-tggtaactatctcacagtgggtacgtacatcaaaaca------tgtacgccttggatatgttccatttttgtttttcaattataactcaacaaacctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917003 244 + 51301725 aAGGCATATGGCGTTAAAGAATTTGTCCAACCCCAGGTAACAAGACGGCAGTGCGTACTTGgaatttgctaagagggtagattATAAGTGTTCTCACACGCAAAAGAAAAGTTAACTGTGCGAGGTGatgtatgttaattagcttgctCG-TGGTAACTATCTCACAGTGGATACGTACATCAAAACA------TGTACGCCTTGGATatgttccatttttgtttttcaattataACTCAACAAacctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620661 244 + 50890351 aaggcacatggcgttaaagaatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagatcataagtgttctcacacgcaaaagaaaagttaactgtgcgaggtaatgtatgttaattagcttgctcg-tggtaactatctcacagtggatacgtacatcaaaaca------tgtacgtcttggatatgttccatttttgtttttcaattataactcaacaaacctgga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=1265.000000 s hg38.chr19_GL949748v2_alt 1008643 4 + 1064304 cata s panTro4.chr19 59940174 4 + 63644993 cata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885787 4 + 60714840 catt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103366086 4 - 106955855 catt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55810193 3 + 59248254 -aaa i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47917247 3 + 51301725 -aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620905 3 + 50890351 -aaa i chlSab2.chr6 C 0 I 1 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669013 325 + 64156825 I a score=1231361.000000 s hg38.chr19_GL949748v2_alt 1008647 577 + 1064304 ttttaatttaaaaataaataaaaaacttgtccaagatcataagtggcagagttgaaatctgcactcacagagtttgattccagggtctccgctcctaaacacgaacctacactACTCTGATGTGAGGTTGTTGTCATAGACCGGTGTGGTGATGCATGCCTGCACACAGGAGTCAGAAAAACAAAGGTTGAGgctgggtgcggcggctcacaccggtcatcccagcactttgggaggccaaggtgggaggatcgcttgagcccaggaa-----------------ggcgaggctgcagtgagctatgatcactgtacactagcctgggtgacagagtgagaccttgtctc-aaaaaaagacagagagagaaAGCAAAAGAAAGGAAGTAAGGAAGATAAAAATATAAGCTGCCTAATAATTATGGCATTCACTCAACAAGAAGAAaaagaaa---gaaagaggaaggaagggaggg----agggaggaa--------ggaaggaaggaaATATATAAGCTGCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTGTAttctttttttgtt s panTro4.chr19 59940178 576 + 63644993 ttttaatttaaaaataaataaaaaacttgtccaagatcataagtggcagagttgaaatctgcactcacggagtttgattccagggtctccactcctaaacacgaacctacactACTCTGATGTGAGGGTGTTGTCATAGACTGGTGTGGTGATGCATGCCTGCACACAGGAGTCAGAAAAACAAAGGTTGAGgctgggtgcggcggctcacaccagtcatcccagcactttgggaggccaaggtgggaggatcacttgagcccaggaa-----------------ggcgaggctgtagtgagccatgatcactgtacactagcctgggtgacagagtgagaccttgtctc-aaaaaaagac----agagaaagcaaaagaaaGGAAGTAAGGAAAATAAAAATATAAGCTGCCTGATAATTATGGCATTCACTCAACAAGAAGAAAAAGAAA---Gaggaaggaagggagggagggaggaaggaaggaa--------ggaaggaaggaaATATATAAGC-GCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCCGTATTCtttttttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885791 567 + 60714840 ttttaatttaaaaataaataaataacttgtccaagatcataagtggcagagttgcaatctgcactcacggagtttgattccagggtctccactcgtaaacacaaacctacactgCTCTGATGTGAGGGTATTGTCATCGTCCAGTGTGGTGATGCACGTCTGCACACAGGAGTC-GGAAAACAAAGGTTGAGgctgggtgcggcggctcgcaccggtcatcccagcactttgggaggccgaggtgggaggatcgcttgagcctaggaa-----------------ggcgaggctgcagtgagccatgatcactgtacaccagcgtgggtgacagagtgagaccttgtctc-aaaaaaagac--agagagaaaGCAAAAGAAAGGAAGTAAGG-AGAGAAAAATATAAGCTGCTTGATAATTATGGCATTCACTCAACAAGAAGAAAAAGAAG---GAGAAAG------aggaagga----agggaggga--------ggaaggaaagaaATATATAAGCTGCCTGATAATTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTATATTCTttttttgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103366090 569 - 106955855 tttaaatttaaaaataaataaaaaacttgtccaagatcgtaagtggcagagttgaaatctgcactcacagagtttgattccagggtctccactcctaaacacgaacctacactACTCTGATGTGAGGGGATTGTCATAGACCGGTGTGGTGATGCATGCCTGCACACAGGAGTcagaaaaacaaaggttgaggctgggtgcggcggctcacaccggtcatcccagcactttgggaggccaaggtgggaggatcgcttgatcctaggaa-----------------ggcgaggctgcagtgagccatgatcactgtacactagcctcggtgacagagtgagaccttatctc-aaaaaaagac----agagaaagcaaaagaaaGGAAGTAAGGAAGAGAAAAATATAAGCTGCCTGAAAATTATGGCATTCACTCAAC---AAGAAaaagaaa---gaaagaggaagggagagaggg----aggaaggaa--------ggaaggaaggaaATATATAAGCTGCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTGTATT-Tttttttgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669338 577 + 64156825 ttttaatttaaaaataaataaataacttgtccaagatcataaggggcggagctgaaatttgcactcacagagtttgattctagggtctccactcctcagcacgaacctacactACTCTGATGTGAGGGTATTGTCGTAGTCCGGTGCGGTGATGCATGCCTGCACCCAGGAGTCAGT-AGACAAAGGTTGAGgccaggggcggcggctcacaccggtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaannnnnnnnnnnnnnnnn----------------gccatgatcactgtactccagcctgggtgacagagtgagaccttgtctcaaaaaaaagacaaagagagaAACCAAAAGAAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAACAAGAAgaaaaaagagaggaaggaaggaagggagagaggg----aggaagggagggtggaaggaaggaaggaaggaTATAAGCTGCCTGATAATCGTAACATTCACTCAGCA------------AATTTTCTCTTAGGCAACTATTAAGTGTCTGTCTGTAttctttttttgtt i rheMac3.chr19 I 325 C 0 s macFas5.chr19 55810523 573 + 59248254 TTTTAATTTAAAAATAAAtaaataacttgtccaagatcataaggggcggagctgaaatttgcactcacagagtttgattctagggtctccactcctcagcacgaacctacactACTCTGATGTGAGGGTATTGTCGTAGTCCGGTGTGGTGATGCATGCCTGCACCCAGGAGTCAGTaagacaaaggttgaggccaggtgcggcggctcacaccggtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaa-----------------gtcgaggctacagtgagccatgatcactgtactccagcctgggtgacagagtgagaccttgtctcaaaaaaaagacaaagagagaaaacaaaagaAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAACAAgaagaaaaaagag----aggaaggaagggagagaggg----aggaagagagggtggaaggaaggaaggaaggaTATAAGCTGCCTGATAATCGTAACATTCACTCAGCA------------AATTTTCTCTTAGGCAACTATTAAGTGTCTCTCTGTATTCTTTTTTTGtt i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47917250 565 + 51301725 ttttaaattaaaaataaataaataacttgtccaagatcataaGGGGCAGAGCTGAAATTTGCACTCACGGAGTTTGATTCTAGGGTCTCCACTCCTCAGCACGAACCTACACTACTCTGACGTGAAGGTATT---GTAGTccggtgtggtgatgcatgctcGCACACAGGAGTCAGTAAGATAAAGGttgaggccgggtgcggcggctcacaccagtcatcccagcactttgggaggccaatgtgggaggactgcttgagcctaggaa-----------------gtcgaggctgcagtgagccatgatcactgtactctagcctgggtgacagagtgagaccttgtctc-agaaaaagacaaagagagaaaacaaaagaaaggaagtaaggaagagaaaaatataagctGCCTGATAATTTTGGCATTCactcaacaagaagaaaaaagag----aggaaggaagggagagaggg----aggaagagagggt----ggaaggaaggaaggatataaGCTGCCTGATAATTGTAACATTCACTCAGGA------------AATTTTCTCTTAAGCAACTATTAAGTGTctgtctgtattctttttttgtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620909 576 + 50890351 TTTTAATTTAAAAATAAAtaaataacttgtccaagatcataaggggcagagctgaaatttgcactcacggagtttgattctagggtctccactcctcaacacaaacctacactACTCTGACATGAGGGTATTGTCATAGTCCAGTGTGGTGATGCATGCCTGCACCCAGGAGTCAGTAAGACAAAGGTTGAGgccgggtgcagcggctcacaccagtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaa-----------------gtcgaggctgcagtgagccatgatcactatactccagcctgggtgacagagtgagaccttgtctc-aaaaaaagaccaagagagaaaaC----GAAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAGTAAGAAGAAAAAAAAA---Gaggaaggaagggagagaggg----aggaagagagggt----ggaaggaaggaaggaTATAAGCTGCCTGATAATTGTAACATTCACTCAGCAA-ATTGTCTCTTAATTTTCTCTTAAGCAACTATTATGTGTCTGTCTGTAttctttttttgtt i chlSab2.chr6 I 1 I 23 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=5010.000000 s hg38.chr19_GL949748v2_alt 1009224 17 + 1064304 gtttcatttgttttgtt s panTro4.chr19 59940754 6 + 63644993 gtttta----------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56886358 17 + 60714840 gtttcgtttgttttgtt i ponAbe2.chr19 C 0 T 3941 s nomLeu3.chr10 103366659 10 - 106955855 gtttcgtttg------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669915 13 + 64156825 gttttgttttgtt---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55811096 13 + 59248254 gttttgttttgtt---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917815 13 + 51301725 gttttgttttgtt---- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I a score=11914.000000 s hg38.chr19_GL949748v2_alt 1009241 18 + 1064304 ttgttttgttttgtttt-g s panTro4.chr19 59940760 14 + 63644993 ----tttgttttgtttt-g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366669 14 - 106955855 ----tttgttttgtttt-g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669928 18 + 64156825 tggttctgttttgttttg- i rheMac3.chr19 C 0 I 670 s macFas5.chr19 55811109 17 + 59248254 tggttctgttttgtttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917828 17 + 51301725 tggttctgttttgtttt-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I a score=27800.000000 s hg38.chr19_GL949748v2_alt 1009259 38 + 1064304 agacggagtctcgctctgtcacccaggctggagtgcaa s panTro4.chr19 59940774 38 + 63644993 agacggagtctcgctctgtcgcccaggctggagtgcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366683 38 - 106955855 agatggagtctcgctctgtcggccaggctggagtgcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811126 31 + 59248254 -------gtttcgctctgtcgcccaggctggggtgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917845 31 + 51301725 -------gtttcgctctgtcgcccaggctggagtgcaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I a score=168.000000 s hg38.chr19_GL949748v2_alt 1009297 7 + 1064304 tggcata s panTro4.chr19 59940812 4 + 63644993 t---ata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366721 7 - 106955855 tggcaca i nomLeu3.chr10 C 0 I 267 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=162.000000 s hg38.chr19_GL949748v2_alt 1009304 70 + 1064304 tatatatatatatatatatatatatatatatatatatatatatatatatatatatatttttttttttttt s panTro4.chr19 59940816 22 + 63644993 tatatatatatatatatatata------------------------------------------------ i panTro4.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e nomLeu3.chr10 103366728 267 - 106955855 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=182.000000 s hg38.chr19_GL949748v2_alt 1009374 2 + 1064304 tt s nomLeu3.chr10 103366995 2 - 106955855 tt i nomLeu3.chr10 I 267 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59940838 0 + 63644993 C a score=13821.000000 s hg38.chr19_GL949748v2_alt 1009376 32 + 1064304 ttttttttttttttttgggaaacagaatctca s panTro4.chr19 59940838 29 + 63644993 ---tttttttttttttgggaaacagagtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56882434 32 + 60714840 ttttttgttttttttttggagacagagtctca i ponAbe2.chr19 T 3941 C 0 s nomLeu3.chr10 103366997 32 - 106955855 tttttttttttttttttggagacagagtctaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=22690.000000 s hg38.chr19_GL949748v2_alt 1009408 25 + 1064304 ctctgttgcccaggctggagtgcag s panTro4.chr19 59940867 25 + 63644993 ctctgttgcccaggctggagtgcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56882466 25 + 60714840 ctctgttgcccaggctggagtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367029 25 - 106955855 ctctgttgcccaggctggagtgcag i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47621508 25 + 50890351 ctctgtcgcccaggctggggtgcaa i chlSab2.chr6 I 23 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=186777.000000 s hg38.chr19_GL949748v2_alt 1009433 119 + 1064304 tggcatgatcccagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccaccatgcccagttaa-ttttgtatg s panTro4.chr19 59940892 119 + 63644993 tggcgtgatcccagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccaccatgcccagttaa-ttttgtatG i panTro4.chr19 C 0 M 469 s ponAbe2.chr19 56882491 119 + 60714840 tggcgtgatcccagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcccagttaa-ttttgtatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367054 119 - 106955855 tggcgtgatcccagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcgccaccatgccccgttaa-ttttgtatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811157 118 + 59248254 tggcatgatctcggctcactgcaatctccgcctcccaggttgaagccattcttctgcctcagcctagagagtagctgggattacaggcactcgccatcatgcccagctaatttttgta-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917876 118 + 51301725 tggcatgatctcggctcactgcaacctccgcctcccaggttgaagcaattcttctgcctcagcctagagagcagctgggattacaggcactcgccatcatgcccagctaatttttgta-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621533 118 + 50890351 tggcatgatctcggctcactgcaatctccgcctcccaggttgaagcaattcttctgcctcagcctagagagtagctgggattacaggcactcgccatcatgccgggctaatttttgta-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=126884.000000 s hg38.chr19_GL949748v2_alt 1009552 113 + 1064304 tttagtagagacagggtttcaccatgttagccaggctgatctcgaactcctgacctcaggtgatccgtccacctcggcctcccaaagtgctggcattacaggcgtgagccacc s ponAbe2.chr19 56882610 113 + 60714840 tttagtagagacagggtttcaccacgttggccgggctgatctcgaactcccgacctcaggtgatccgcccacctcggcctcccaaagtgctggcattacaggcgtgagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367173 110 - 106955855 tttagtagagacagggtttcaccatgttagccaggctgatctcgaactcctgacctcaggtgatccgctcacctcggcctccca---tgctgggattacaggcgtgagccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811275 107 + 59248254 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgaaccacc i macFas5.chr19 C 0 I 49 s papAnu2.chr19 47917994 107 + 51301725 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgaaccacc i papAnu2.chr19 C 0 I 33 s chlSab2.chr6 47621651 107 + 50890351 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccacc i chlSab2.chr6 C 0 I 44 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=2560.000000 s hg38.chr19_GL949748v2_alt 1009665 10 + 1064304 gtgcccgacc s ponAbe2.chr19 56882723 10 + 60714840 gcgcctggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367283 10 - 106955855 gcgcccggcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811431 10 + 59248254 aaaTCCCATC i macFas5.chr19 I 49 C 0 s papAnu2.chr19 47918134 10 + 51301725 aaatcccatc i papAnu2.chr19 I 33 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621758 44 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=55725.000000 s hg38.chr19_GL949748v2_alt 1009675 45 + 1064304 AGGAATTAAAAATAGACAACCACCACCAAGAT--AAAAAAAGGTATA s ponAbe2.chr19 56882733 45 + 60714840 AGGAATTAAAAATAGACAACCACCACCAAGAT--AAATAAAGGTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367293 45 - 106955855 AGGAATTAGAAATAGACAACCACCACCAAGAT--AAATAAAGGTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811441 47 + 59248254 AGGAATTAAAAATAGACAACCATCACCAAGGTAAAAATAAAGGTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47918144 47 + 51301725 agGAATTAAAAATAGACAACCATCACCAAGGTAAAAATAAAGGTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621802 45 + 50890351 AGGAATTAAAAATAGACAACCATCACCAAGGT--AAATAAAGGTATA i chlSab2.chr6 I 44 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=410147.000000 s hg38.chr19_GL949748v2_alt 1009720 280 + 1064304 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagcgagaagagagtatttgagtctgaccctgaaagaagtaatgaggcagccaggctggtccattctagtagcagagaggaggccagtgatgctgtggaggggagtgaggcagggaagaggggagggagGCAGGATTTATAACGCGGAATAGA-CCACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaatttaaTTA s panTro4.chr19 59941489 271 + 63644993 CTTCACATACCAGATAGTG-GGAGG-CCACTT-GACTAGG-TGGTGGGG-ATATACTTAGTGAGA-GAGAGCATTTGAGTCTGACCC-GAAAGAAGTA-TGAGGCAGCCAGGCTGGTCCACTCTAGTAGCAGAGAGGAGGCCGGTGATGCTGTGGAGGGGAGTGAGGCAGGGAAGAGGGGAGGGAGGCAGTATT-ACAACGCGGAATAGA-CCACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaacttaaTTA i panTro4.chr19 M 469 C 0 s ponAbe2.chr19 56882778 260 + 60714840 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagtgagaagagagcatttgagtctgaccccaaaagaagtaatgaggcagccaggcTGGCCCATTCTAGTAGCAGAGAGGAGGCCGGTGATGCTGTGGAGGGGAGAGAGGCAGG--------------------ATTTACAATGCGGAATAGA-ACACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaatttaaTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367338 281 - 106955855 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagtgagaagacagcatttgggtctgaccccgaaagaagtaatgaggcagccaggcTGGTCCATTCTAGTAGCAGAGAGGAGGCGGGTGATGCTGTggaggagagtgaggcagggaagaggggagggaggcaggATTTACAACGCGGAATAGACCCACAGTGCAGCTggccaggaattagggtagcgtgagtgaggcactctcctgggatgtaaaatttaaTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811488 257 + 59248254 CTTGACATACCAGATAGTGAGGAGGACCATTTTGACTAGGGTGGTGGGGTAAATACTTAATAAGAAGATGGCATTTGAGTCTGACCCCAAAAGAAGTAATGAGGCGGCCAGGCTGGTCCATCCTAGCAGCAGAGAG-----------------------GAGTGAGGGAGGAAAGAGGGGAGGTAGGCAGAATTTACAACGCGGAATAGA-CCACAGTGCAGCgggccgggaattagggtggcatgagtgaggcactctcctgggatgtaaaatgtaaTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47918191 257 + 51301725 CTTGACATACCAGATAGTGAGGAGGACCATTTTGACTAGGGTGGTGGGGTAAATACTTAATAAGAAGATGGCATTTGAGTCTGACCCCAAAAGAAGTAATGAGGCGGCCAGGCTGGTCCATCCTAGCAGCAGAGAG-----------------------GagtgagggaggaaagaggggaggTAGGCAGAATTTACAACGCGGAATAGA-CCACAGTGCAGCGGGCCAGGAATTAGGCTGGCATGAGTGAGGCACTCTCCTGGGatgtaaaatgtaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621847 257 + 50890351 CTTGACATACAAGATAgtgaggagggccattttgactagggtgatggggtaaatacttaataagaagatggcatttgagtctgactccaaaagaagtaatgaagcggccaggcTGGTCCATCCTAGCAGCAGAGAG-----------------------GAGTGAGGGAGGAAAGAGGGGAGGTAGGCAGAGTTTACAACGCAGAAGAGA-CCACAGTGCAGCgggccaggaattagggtggcatgagtgaggcactctcctgggatgtaaaatgtaaTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=168891.000000 s hg38.chr19_GL949748v2_alt 1010000 101 + 1064304 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGGTCGTTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTCCCCT--------GAAAGA---------------- s panTro4.chr19 59941760 101 + 63644993 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGACGAGTAGGTCGTTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTCCCCT--------GGAAGA---------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883038 105 + 60714840 TTCCCAAAC----AACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGATCATTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTTCTTCCCCCGAAAGAAAGA---------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367619 105 - 106955855 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--GTTTCAA-----TACTTTATTTATTCGCCT----GAAAGA---------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811745 100 + 59248254 TTCCCAAACAATTAACATATTTGAAAAAATGTTTGCAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAA-----TAC-TTATTCCCGT--------GAAAGA---------------- i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47918448 100 + 51301725 ttcCCAAACAattaacatatttgaaaaaatgtttgcaaatttgAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAA-----TAC-TTATTCCCgt--------gaaaga---------------- i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47622104 105 + 50890351 TTCCCAAACAATTAACATATTTGAAAAAATGTTTGAAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAATACTTTAC-TTATTCCCCT--------GAAAGA---------------- i chlSab2.chr6 C 0 I 446 s canFam3.chr1 20087537 115 - 122678785 TTTCCAGGCTATTAAC--AGTTGAAAAAA---TTGAAAAACTTTAAAGTAGGCTATTAAAACTCACaaattattttaagtttaaa-----tat-ttatttatac--------aaaaaaaatactttttaaagaa i canFam3.chr1 I 689 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=20163.000000 s hg38.chr19_GL949748v2_alt 1010101 14 + 1064304 TTTATTAGAATTTT s panTro4.chr19 59941861 14 + 63644993 TTTATTAGAATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883143 14 + 60714840 TTTATCATGATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367724 14 - 106955855 TTTATTAGGATTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811849 14 + 59248254 TTTATTATGAtttt i macFas5.chr19 I 4 I 155 s papAnu2.chr19 47918552 14 + 51301725 tttattatgatttt i papAnu2.chr19 I 4 I 1288 s canFam3.chr1 20087652 14 - 122678785 tttattatCCTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I a score=15046.000000 s hg38.chr19_GL949748v2_alt 1010115 27 + 1064304 -ACATTCTAGGCTTTTGTGGATGCAAGC s panTro4.chr19 59941875 27 + 63644993 -ACATTTTAGGCTTTTGTGGATGCAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883157 27 + 60714840 -ACATTCTAGGCTTTTGTGGTTGCAAGC i ponAbe2.chr19 C 0 I 7304 s nomLeu3.chr10 103367738 27 - 106955855 -ACATTCTAGGCTTTTGTGGATGCAAGC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20087666 27 - 122678785 AATTCTCCTGACTTTAG-GGAAACAAAT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=24636.000000 s hg38.chr19_GL949748v2_alt 1010142 65 + 1064304 GCATCAGTGCTATTTCCAAAACCTACTTCTAGAAAA----TAACCATTTAAAAGTGCACTA-------ACTGGgtg s panTro4.chr19 59941902 65 + 63644993 GCATCAGTGATATTTCCAAAACCTACTTTTAGAAAA----TAACCATTTAAAAGTGCACTA-------ACTGGgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103367765 69 - 106955855 CCATCAGTGATAGTTCCAAAACCTACTTCTAGAAAATAATTAACCATTTAAAAGTGCACTA-------ACTGGgtg i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20087693 70 - 122678785 TCATCAATGATATTTTCAAAATCTG--TTCAGAAAA----TTACCATTTAAAAATGCTTTAGAgggacactgggtg i canFam3.chr1 C 0 I 698 e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=156861.000000 s hg38.chr19_GL949748v2_alt 1010207 622 + 1064304 cacctatagtcccagctactagggaggaccacttgagcccagggatttgaggctaaagtgagctatgatcatgcctgtgaatacagcgagtgtactaaagcctgggcaacatagtaagacctcttctctt----------tttttttttttcccaagacggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcggctcaccgcctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacaggagtgcgccaccgcgcccagctaattattattatt--------ttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttaagtgatccacccacctcagcctcccaaagtactgggattacaggcgtgagccgccgcgcccggcccaacctcttctcttaaaaaaaataaataa----------ataagaaaagaAATTAGAATATTTGCACCAATCaagagtctaaggagacataaatactaaatgcactgtggggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataatatagttgtgtctat s panTro4.chr19 59941967 635 + 63644993 cacctatagtcccagctactagggaggaccacttgagcccagggggttgaggctaaagtgagctatgatcatgcctgtgaatatagcgagtgtactaaagcctgggcaacatagtaagacctcttctcttctc-----ttttttttttttttccaagacggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcggctcactgcctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacaggagtgcgccaccgcgcccagctaattattattattatttttttttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttaagtgatccacccacctcagcctcccaaattactgggattacaggcatgagccgccgtgcccggcccaacctcttctcttaaaaaaaataaataa----------ataagaaaagaaaTTAGAATATTTGCACCAATCaagagtctaaggagacataaatactaaatgcactgtggggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataacatagttgtgtctat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103367834 628 - 106955855 cacctgtagtcccagctactagggaggaccacttaagcccaggggtttgaggctaaagtgagctatgatcgtgcctgtgaatgt--------------agcctgggcaacatagtaagacctcttctcttctcttttttttttttttttttcccaagacggagtcttgctctgtcgcccaggctggagtgcagtggtgcagtctcggctcactgtctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacagacgtgcgccaccgtgcccagctaattatttttatt-------ttttttaagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgaccttaagtgatccacccgcctcggcctcccaaagtactgggattacaggcgtgagccactgcgcctggcccaacctcttctctaaaaaaaaaaaaaaaaaaaaagaaagaaaagaaaagatattagaatattcgcaccaatcaagagtctaaggagacataaatactgaatgcactgt-gggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataacatagttgtatctat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=73429.000000 s hg38.chr19_GL949748v2_alt 1010829 244 + 1064304 ggttagttt----tttgtttgtttt--ttgatacagggtctcactctgtcacccaggctggagtgcagtggcgtgatcacagctccctgcagcctcggcctccctggctcaagcgatcctcctgcctcagcctcctgagtagctgggactataggtgtatgccaccatgccccactaatttttaatttt----------gtttaaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactcctgagctcaagcaa s panTro4.chr19 59942602 244 + 63644993 ggttagttt----tttgtttgtttt--ttgatacagggtctcactctgtcacccaggctggagtgcagtggcatgatcacagctccctgcagcctcggcctccctggctcaagtgatcctcctgcctcagcctcctgagtagctgggactataggcgtatgccaccatgccccactaatttttaatttt----------gtttaaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactcctgagctcaagcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368462 233 - 106955855 ggttagttttttgtttgtttgtttt--ttgatacagggtctcactctgtcacc--------------gaggcatgatcacagttccctgcagcctcggcctccctggctcaagcgatcctcctgcctcagcctcctgagtagctgggactataggtgtatgccaccatgccccactaatttttaatttt-----------tttgaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactccggagctcaagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55812018 256 + 59248254 ggctaattt----ttttgtatttttagtagagacagggtttcactgtgttagccaggatg-------------------------------gtctccatctcttggcctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgtctggccTATGGTTAGttttttgtttgtttgtttgttgatacaggatcttactctgtcacccaagctggagtgcagaggcacgatcacagctctctgtagcctcagcctccctggctcaagtgg i macFas5.chr19 I 155 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e rheMac3.chr19 60669946 670 + 64156825 I a score=21961.000000 s hg38.chr19_GL949748v2_alt 1011073 24 + 1064304 tcctcccgcctcagcctcccaaag s panTro4.chr19 59942846 24 + 63644993 tcctcccgcctcagcctcccaaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368695 24 - 106955855 tcctcccacctcagcctcccaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55812274 24 + 59248254 tcctcctgcctcagcctcccaaag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47622655 24 + 50890351 tcctcctgcctcagcctcccaaag i chlSab2.chr6 I 446 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47918566 1288 + 51301725 I e rheMac3.chr19 60669946 670 + 64156825 I a score=418039.000000 s hg38.chr19_GL949748v2_alt 1011097 327 + 1064304 tgctgggattacaggtgtaaaccactgggaccagtgctacgtttattttttggttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatatttccattaatattatctttggaacttttctgtcagtctaaaaattactccaaaacaaagtt-----ttaaaaaGAATCCCGAgccaagcacggtggcccgtgaccgtagtccctgctactcatgaggctgaggcaggaggattgctcaaggcaaggagctccaggctgcagtgagctatgactgct----------cctatgaacagccactgcactccggcctgggcagtgtagcaagac s panTro4.chr19 59942870 327 + 63644993 tgctgggattacaggtgtaaaccactgggaccagtgctacgtttattttttggttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatatttccattaatattatctttggaacttttctgtcagtctaaaaattattccaaaacaaagtt-----ttaaaaaGAATCCCGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagctccaggctgcagtgagctatgactgct----------ccagtgaacagccactgcactgcagcctgggcagcgtagcaagat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368719 327 - 106955855 tgctgggattacaggtgtaaaccactgggaccagtgctatgtttattttttagttgtaacaaatgtaagacgttaacatgaggggatcccgggtgaaatatttccattaatattatctttgcaacttttctgtcagtctaaaaattattccaaaacaCACTT-----TTAAAAAGAATCCCGAgccaagcatggtggcctgtgactgtagtccctgctactcgtgaggctgaggcaggaggattgctgaaggcaaggagctccaggttgcagtgagctatgattgct----------cctgtgaacagccactgcactccagcctgggcaatgtagcaagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60670616 342 + 64156825 tgctgggattacaggtgtgagccacTGGGACCAGTGCTGtgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagttccaggctgccgtgagctatgattgctctgcagtgagctggtgaacagccactgcgctccagcctggaccacatagcaagag i rheMac3.chr19 I 670 C 0 s macFas5.chr19 55812298 332 + 59248254 tgctgggattacaggtgtgagccacTGGGACCAGTGCTatgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagttccaggctgccgtgagctatgattgct----------cctgtgaacagccactgcactccagcctggaccacatagcaagag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47622679 332 + 50890351 tgctgggattacaggtgtgagccacTGGGACCAGTGCTatgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaacattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattggttaaggcaaggagttccaggctgccgtgagctatgattgct----------cctgtgaacagccactgcactccagcctgggccacatagcaagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47918566 1288 + 51301725 I a score=1004241.000000 s hg38.chr19_GL949748v2_alt 1011424 620 + 1064304 cccatcgctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGGTTGCCTGtttttcgttttggcacagactctggtatgacttgacacaggcactggctgattctgcctttatttgaaattctgg-ttttttt--cattgtggatgtttttgcaatttattttgatttttttaaaaattgcatgaaaatgttattcacagccagatgcagtggctcacgcctgaaatcccaacactttgggaagccaaggtggaaggatagcttgagcccacaggagttcgagaccagcctgagcaacatagcgagaccctatctctctctcttttgtattttaatgccttttgtgaaaactgtcaagagaccccatctctat-aaaaacataaaaaatgagctgggcgtggtggtgcacacctgtaatcctagctacttggagggctgaggcgggagaatcgcttgagccctgg---aggtggaggctgcagtgagccaagatcgcgccactgctctccaccctgggtgacgcagcaagaccctgtgtccaaaaaac-----aaaatattattcacattgatccataaatgtcgtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa s panTro4.chr19 59943197 619 + 63644993 cccatcGCTAATTTTTTTAAGTGCATTAAAACA--GATAAAGGGGCGCCTGtttttcgttttggcacagactctggtatgacttggcacagacactggctgattctgcctttatttgaaattctgg-ttttttt-tcatcgtggatgtttttgcactttattttgattttttttaaaattgcatgaaaatgttattcacagccagatgcagtggctcacgcctgtaatcccaacactttcggaagccaaggtggaaggattgcttgagcccacaggagttcgagaccagcctgagcaacatagcgagaccctatctctctgtcttttgtattttaatgccttttgtgaaaactgtcaagagaccccatctctgt-aaaaacataaaaaatgagctgggcgtggtggtgcacacctgtaatcccagctacttggagggccgaggcaggagaatcgcttgagccctgg---aggtggaggctgcagtgagccaagatcgcgccactgcactccaccctgggtgacgcagcaagaccctgtgtccaaaaaat-----aaaatattattcacattgatccataaatgtcgtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369046 607 - 106955855 cccatctctaaTTTTTTTAAGTGTGTTAAAACACAGATAAAGGGGTGCCTGtttttcgttttggcacagcttctggtatgacttggcacaggcactggctgattctgcctttatttgaaattctga-ttttttt-ttatcgtggatgtttttgcaatttatt----ttttttt---aattgcattaaaatgttattcacagacagatgcagtggctcacgcctgttatcccaacactttgggaggccaaggtggaaggattgcttgagcc--caggagttcgagaccagcctgagcaacacagcgagaccc--tctctctctcttttgtattttaatgccttttgtgaaaactgtcaggagaccccacctctac-aaaaacataaaaagtgagctgggcatggtggtgcacacctgtagtcccagctacttggagggctgaggcaggagaatcgcttgagcctggg---aggcggaggctgcagtgagccaagatcgcgccactgcactccaccctgggtgatgcagcaagaccctgtgtccaaaaaat-----aaaatattattcacattgatccataaat---gtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60670958 611 + 64156825 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------ttggcacaggcactgcctgattctgcctttatgtgaaattctga-tttttttttcatcgtggatg-gtttgcgatttcttttgattttttaaaaaattgcattaaaatgttattctcacccagatgcagtggctcaggcctgtaaacccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaacaaaacaaaatgttattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgccctaattccggccctAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55812630 611 + 59248254 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------ttggcacaggcactgcctgattctgcctttatgtgaaattctga-tttttttttcatcgtggatg-gtttgcgatttcttttgattttttaaaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaaacccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaacaaaacaaaatattattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgccctaattccggccctAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47919854 612 + 51301725 cccgtctctaatttttttaagtgcattAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------TTGGCACAGGCACTGCCTGATTCTGCCTTTATgtgaaattctgattttttttttcatcatggaTG-GTTTGcgatttcttttgattttttaaaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaatcccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaatcaacatagcaagaccc--tctctctctcttt--tattttaatgccTTTTGTGAAAACTGTcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcAGCAAGGCCCTgtgtccaaaaaacaaaacaaaatattattcacaTTGATCCATAAATGTTGTGGCACCACCACCCGCTAGGCCAGTGCCTGGTTTGCCTTGCCCTAATTCTGGCCCTAA i papAnu2.chr19 I 1288 C 0 s chlSab2.chr6 47623011 632 + 50890351 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGGGTGCCTGtttttcgttttagcacaggctctggtatgacttggcacaggcactgcctgattctgcctttatttgaaattctga-tttttttttcatcgtggatg-gtttgccatttattttgattttttttaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaatcccaacactttgggaggccaaagtgggaggattgcttgagcc--caggagtttgag---agcctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctacttggagggctgaggcaggagaatcacttgaacttaggataaggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaat-atataaaatattattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgtcctaattccggccctAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=16400.000000 s hg38.chr19_GL949748v2_alt 1012044 8 + 1064304 tccctgcc s panTro4.chr19 59943816 8 + 63644993 cccctgcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369653 8 - 106955855 tccctgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671569 8 + 64156825 TCCCTGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813241 8 + 59248254 TCCCTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920466 8 + 51301725 TCCCTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623643 8 + 50890351 TCCCTGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20088461 8 - 122678785 TCGCTGTC i canFam3.chr1 I 698 C 0 e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=755687.000000 s hg38.chr19_GL949748v2_alt 1012052 264 + 1064304 ctCAATGTCCCCCGTATTTGTGTCCTGAA---CGGAGGAC-CACGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCCGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACTGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG s panTro4.chr19 59943824 264 + 63644993 ctCAATGTCCCCCATATTTGTGTCCTGAA---TGGAGGAC-CGCGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAATGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACTGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369661 264 - 106955855 ctCAATGTCCCCCGTATTTGTGTCCTGAA---TGGAGGAC-CACGCAGTCCCAGGCTCTGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCTGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGATGTGTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTAGCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671577 264 + 64156825 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGATGTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813249 264 + 59248254 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGATGTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920474 264 + 51301725 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGACGTTTCTTCATGGCCGGGATGAAGAGCACCGCCTGATCCTGGTAACTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623651 264 + 50890351 CTCAATGTCCCCCATATTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCAATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGGTCCTGGTATCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 40726 264 + 138250 ccTAACATCCCCCATATTCGTGTCCCGAA---CGGAGGCC-CATACAGTCCCAGGCTACAATCCCCTGTCCTTTACCAGTGGCAATGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGCGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCGTCACTTTGCTTCATGGCCGGGATGAGGAGGACCGCCTGATCCCGGTAGCTGTTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACACCCGGAGGTCCCTGGCACCGGAGGG i calJac3.chr22_GL285922_random I 3745 C 0 s canFam3.chr1 20088469 265 - 122678785 ATCATCATCCCCCTCTTCACCCTCCTGGAGCCCTGAGGCCACAGGTGGCCCC---CTCCCATGCCCTTCCAGGTACCAGTGGCCACCAGCTCCAGCTGGTTGCTGGGGGGAGACCAGAGGGTCCCGTTCTGGTAGGAGCAGCGGTAACACCCAGCGAAACTTTCCTCCATGGTCTTGATGAAGAGGACAGGCCGATCCTGGTATTTCCGGGACCTCAGCTTCTCCAGGCGGTACAAGTCCACGTCTGGAGGCCCCTGGCAGCGGATGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56883184 7304 + 60714840 I a score=1529597.000000 s hg38.chr19_GL949748v2_alt 1012316 483 + 1064304 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCGCCTGG--ACCCCGCTGCTCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTGCTGGGCGCGGTGATAAGACATTTGCATGCATATGCTTTACTCTGTCCTAA----TAATTTCTTCAAAAGACACACAGGAATGTAATTtaagtg---agagaaaccggtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagatggagaagaaagcagatccatggctg--------ggggtggt-gggagag-gagggc s panTro4.chr19 59944088 483 + 63644993 TCACTGGCTTCT-CCAGCGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCGCCAGG--GCCCCGCTGCCCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTGCTGGGCGCAGTGATAAGACATTTGCATGCATATGCTTTACTCTGTCCTAA----TTATTTCTTCAAAAGACACACAGGAATGTAATTtaagtg---agagaaaccggtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagatggagaagaaagcagatccatggctg--------ggggtggt-gggagag-gagggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890488 482 + 60714840 TCACTGGCTTCTCCCAGGGGCACCA-GGAGCTGGGCAGAG-CTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCACCTGG--GCCCCGCTGCCCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTTTGTGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCGTGCCTGCTGGTCGTGGTGATAAGACATTTGCGTGCATATGCTTTACTCTGTCCTAA----TTATTTCTTCaaaagacacacaggaatgtaatttaagtg---agagaagccagtcagaaaaagccatgtagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagacggagaagaaaacagatccatggctg--------gcggtggt-gggagag-gagggt i ponAbe2.chr19 I 7304 C 0 s nomLeu3.chr10 103369925 483 - 106955855 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CTGCCTGG--GCCCCACTGCCGC--CACGCTGGCGGATCCCT----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACATAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTACTGGACACGGTGATAAGACATTTGCATGCATGTGCTTTACTCTGTCCTAA----TTATTTCTTCaaaagacacacaggaatgtaatttaagtg---ggagaagccagtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagacagagaagaaaacagatccatggctg--------ggggtggt-ggaagag-gagggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671841 490 + 64156825 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACGCGCTCGTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAGAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatagtctatgaggtcgtttacatgaaatatccagaataggtaaatcta-tagaaggaggagaagaaaacagatccacggctg--------ggggaggg-gggagag-gagggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813513 490 + 59248254 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATACCAGGACGCGCTCGTAGGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAGAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatagtctatgaggtcgtttacatgaaatatccagaataggtaaatcta-tagaaggaggagaagaaaacagatccacggctg--------ggggaggg-gggagag-gagggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920738 490 + 51301725 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGTGGGCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCcctgaggaaagaagaaagggaccAGATGCCAGGACGCGCTTGTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTgtgctaattatttatttcttcaaaagatacatgtgcatgtaatttaagtg---agagaagccagtcaGAAAAAGCCACATAGCCTATGAGGTCGtttacatgaaatatccagaagAGGTAAATCTA-TAGAAGACGGAGAAGAAAACAGATccatggctg--------ggggtggg-gggagag-gaggGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623915 490 + 50890351 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGCCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACGCGCTTTTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAAAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatcgtctatgaggtcatttacatgaaatctccagaataggtaaatctg-tagaagacggagaagaaaacagatccatggctg--------ggggtggt-gggagag-gagggc i chlSab2.chr6 C 0 I 615 s calJac3.chr22_GL285922_random 40990 468 + 138250 TCACTGGCTTCT-CCAGAGGCACCAGGGAGCTGGGCACAGCCTGCAGGGAGGGCTTGGGGAGTGGTCCTGGAAGAGGAGCAGAGCTGGGTCAGCCTCCCTGCAGACC-TCGCCTGG--AACCCACTTCCCCCACCTGCTGGTGGATCCCA----------CAGG--------------AGGGAAGGACTCACCGCTCTGTGCTTG---CACATGCCCCAGACACAGCCCTGAGGAGAGAAGAAAGAGACTAGAGGCCAGGACTGACTTTTATAAACACTGCTGCCTGCTGGGTGCGGCGACAAGACATTTGCATGCCTGTGCTTTATTCTCTCCTAATCACTTATTTCTTCAAAAGACAcacaggcatgtaatttgagtg---agagaagccagtcagaaaaagccacattgtttacgatgtcatttatatgaaatatccagaaggggtaaatcta-cagaagacag----------agacacatggctg--------ggggtggtcgggagagcgaggac i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20088734 490 - 122678785 TCACCTGCGTCT-TCAGGGGTGCTAGGGAGCTAGGCAGAGCCTGGAGGGAGGGCTTGGGCAGGGTACCTGGAAGGGAAGCAGAATT---------TCCAAACAGACCTCCTCCTGGGTGCTCCCCTCCTCC--CACCCTCCTGGCCCTTGTGCAGGCACCCAGATCCAGAGGATTCCAGGGGAAGGACTCACCAAGCTGTGCTTGCACCACCTGCCCCAGACACAGCCCTGAGCAGAGAAGAAAAGCACCACCTGCTAGCATCTCCTGGAGGCCACACTTCTGCACGCAGAGCA-GGTAATGCCACATCTTCAGGCAGTCACTTTCTTCTGTCCTCAT---TTGCTT-----AAGGACACACACTCacataatttgagtgccagaagaagccagccacagaaggccacatattgtatgattccatttatctgaaacatgctcactaggtaaatctgctcagacatggag--------agattagtggttgccagaaactggggggt-gggtggc-aggggc i canFam3.chr1 C 0 C 0 a score=4279.000000 s hg38.chr19_GL949748v2_alt 1012799 3 + 1064304 aag s panTro4.chr19 59944571 3 + 63644993 gag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890970 3 + 60714840 gag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370408 3 - 106955855 gag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672331 3 + 64156825 gag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55814003 3 + 59248254 gag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921228 3 + 51301725 GAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 41458 3 + 138250 gag i calJac3.chr22_GL285922_random C 0 I 1290 s canFam3.chr1 20089224 1 - 122678785 -a- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47624405 615 + 50890351 I a score=14793.000000 s hg38.chr19_GL949748v2_alt 1012802 11 + 1064304 gcatggtggcg s panTro4.chr19 59944574 11 + 63644993 gcgtggcggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890973 11 + 60714840 gcgtggcggcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370411 11 - 106955855 gcgtggcggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672334 11 + 64156825 acgtggcggcg i rheMac3.chr19 C 0 I 599 s macFas5.chr19 55814006 11 + 59248254 acgtggcggcg i macFas5.chr19 C 0 I 592 s papAnu2.chr19 47921231 11 + 51301725 ACGTGGCGGCG i papAnu2.chr19 C 0 I 577 s canFam3.chr1 20089225 5 - 122678785 ---ttgag--- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I a score=17543.000000 s hg38.chr19_GL949748v2_alt 1012813 32 + 1064304 tactgctCTCTGTGGACTTG--TTCGTGTTAGAC s panTro4.chr19 59944585 32 + 63644993 tactgCTATCTGTGGACTCG--TTCGTGTTAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890984 32 + 60714840 tactgCTATCTGTGGATTCG--TTCGTGTTAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370422 32 - 106955855 tactgCTATCTGTGGATTCA--TTCATGTTAGAC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20089230 34 - 122678785 gagtgattttcatgggcatgatttccttttagac i canFam3.chr1 C 0 I 2803 e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=25291.000000 s hg38.chr19_GL949748v2_alt 1012845 63 + 1064304 ACGGTGGGCTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGGCTCGTTC s panTro4.chr19 59944617 62 + 63644993 ACGGTGGGCTCGTTCGCGTTGGACGCGGAGGGTTCGTTCGTGTTAGACGCGG-GGGCTCGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891016 63 + 60714840 ACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTCTGGATTGGTTC i ponAbe2.chr19 C 0 T 84 s nomLeu3.chr10 103370454 63 - 106955855 ACTGTGGATTCGTTCGTGTTAGACGCCGTGGATTCGTTCGTGTTAGACGCCGTGGATTCGTTC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=300.000000 s hg38.chr19_GL949748v2_alt 1012908 1 + 1064304 G s panTro4.chr19 59944679 1 + 63644993 G i panTro4.chr19 C 0 T 84 s nomLeu3.chr10 103370517 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891079 84 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=8898.000000 s hg38.chr19_GL949748v2_alt 1012909 170 + 1064304 TGTTAGACACGGTGGGCTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTTAGACGCGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACG s nomLeu3.chr10 103370518 155 - 106955855 TGTTAGACGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTC-----GCGTTAGGCGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTC-----GTGTTAGACGCCGTGGATTCGTTC-----GTGTTAGGCGCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891079 84 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944680 84 + 63644993 T a score=33146.000000 s hg38.chr19_GL949748v2_alt 1013079 73 + 1064304 GTGGACTCGTTCGTGTTAGACACGGTGGGTTCGTTCGTGTTAGACACGGTGGGTTCGTTCGTGTTAGACGCGG s panTro4.chr19 59944596 73 + 63644993 GTGGACTCGTTCGTGTTAGACACGGTGGGCTCGTTCGCGTTGGACGCGGAGGGTTCGTTCGTGTTAGACGCGG i panTro4.chr19 T 84 M 773 s ponAbe2.chr19 56890995 73 + 60714840 GTGGATTCGTTCGTGTTAGACACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTC i ponAbe2.chr19 T 84 C 0 s nomLeu3.chr10 103370673 73 - 106955855 GTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=6150.000000 s hg38.chr19_GL949748v2_alt 1013152 28 + 1064304 TGGGTTCGTTCGTGTTAGACGCGGTGGA s ponAbe2.chr19 56891068 28 + 60714840 TGGATTGGTTCGTGTTAGACACTGTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370746 28 - 106955855 TGGATTCATTCGTGTTAGGCGCTGTGGA i nomLeu3.chr10 C 0 T 120 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=671.000000 s hg38.chr19_GL949748v2_alt 1013180 12 + 1064304 CTCCTTCGTGTT s ponAbe2.chr19 56891096 12 + 60714840 TTCGTTCGTGTT i ponAbe2.chr19 C 0 T 113 s nomLeu3.chr10 103370654 7 - 106955855 TTCGTTC----- i nomLeu3.chr10 T 120 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=677.000000 s hg38.chr19_GL949748v2_alt 1013192 12 + 1064304 GTGTTAGACACG s nomLeu3.chr10 103370661 12 - 106955855 GTGTTAGGCGCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 113 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=25015.000000 s hg38.chr19_GL949748v2_alt 1013204 118 + 1064304 GTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTT s ponAbe2.chr19 56890995 113 + 60714840 GTGGATTCGTTCGTGTTAGACACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTCTGGATTGGTTC-----GTGTTAGACACTGTGGATTCGTTCGTGTT i ponAbe2.chr19 T 113 T 29 s nomLeu3.chr10 103370673 113 - 106955855 GTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTGTGGATTCATTC-----GTGTTAGGCGCTGTGGATTCGTTCGTGTT i nomLeu3.chr10 C 0 T 101 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=0.000000 s hg38.chr19_GL949748v2_alt 1013322 58 + 1064304 GTGTTAGACACGGTGGGCTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTT e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 101 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=6514.000000 s hg38.chr19_GL949748v2_alt 1013380 106 + 1064304 GTGTTAGACACGGTGGGCTCGTTCGTGTTAGACGCGGTGGGCTCGTTCGTGTTAGACGCGGTGGGCTCGTTCGTGTTGTGTTAGACACGGTGGGCTCGTTCGTGTT s nomLeu3.chr10 103370685 101 - 106955855 GTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTGTGGATTCATTC-----GTGTTAGGCGCTGTGGATTCGTTCGTGTT i nomLeu3.chr10 T 101 T 12 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=0.000000 s hg38.chr19_GL949748v2_alt 1013486 29 + 1064304 GTGTTAGACACGGTGGGCTCGTTTGTGTT e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=932.000000 s hg38.chr19_GL949748v2_alt 1013515 12 + 1064304 GTGTTAGACACG s ponAbe2.chr19 56891079 12 + 60714840 GTGTTAGACACT i ponAbe2.chr19 T 29 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=600.000000 s hg38.chr19_GL949748v2_alt 1013527 1 + 1064304 G s ponAbe2.chr19 56891091 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55814609 1 + 59248254 g i macFas5.chr19 I 592 C 0 s papAnu2.chr19 47921819 1 + 51301725 G i papAnu2.chr19 I 577 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=2241.000000 s hg38.chr19_GL949748v2_alt 1013528 4 + 1064304 TGGG s ponAbe2.chr19 56891092 4 + 60714840 TGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55814610 4 + 59248254 tgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921820 4 + 51301725 TGGA i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 42751 4 + 138250 TGTG i calJac3.chr22_GL285922_random I 1290 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=2949.000000 s hg38.chr19_GL949748v2_alt 1013532 4 + 1064304 CTCG s ponAbe2.chr19 56891096 4 + 60714840 TTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370774 4 - 106955855 TTCG i nomLeu3.chr10 T 12 C 0 s macFas5.chr19 55814614 4 + 59248254 ttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921824 4 + 51301725 TTCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 42755 4 + 138250 TTCA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=427215.000000 s hg38.chr19_GL949748v2_alt 1013536 211 + 1064304 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGATGTGAGGAATGGGACCTGAGACATTGCTGTCCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTACATTACAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACtattgcatattgtatattattgt----attttattgtctatgtaatatATGCGATA s ponAbe2.chr19 56891100 211 + 60714840 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGGTGTGAGGAATGGGACCTCAGACATTGCTGTTCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTGCATTACAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGTATATTATTGT----ATTTTATTGTCTATGTAATATATGCGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370778 211 - 106955855 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGATGTGAGGAATGGGACCTCAGACATTGCTGTTCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTGCATTCCAATAGTATGCAATTGTA-TACACAGGTATTGTAAATActattgcgtattgtatattattgt----attttattgtctatgtaatatatGCGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672944 212 + 64156825 ttcgtgttagacatttgcccgttgacttcctcagtggatgtgaggaATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTACGCAATTGTATTAGACAAGTATTGTAAATACTATTGCATATTGTATATTGTTGT----ATTTTATTGTATATGTAATACATGCAGTA i rheMac3.chr19 I 599 C 0 s macFas5.chr19 55814618 212 + 59248254 ttcgtgttagacatttgcctgttgacttcctcagtggatgtgaggaATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGGCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTACGCAattgtattagacaagtattgtaaatactattgcatattgtatattgttgt----attttattgtatatgtaATACATGCAGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921828 210 + 51301725 TTCATGTTAGACA-TTGCCCGTTGACTTCCTCAGTGGATGTGAGGAATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGtatattgttgt----attttattgCATATGTAATACATGCAGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625020 202 + 50890351 TTCGTGTTAGACATTTGCCCGTTGATTTCCTCAGTGGATGTGAGGAATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCTCCCAATATGAAACAATATCCAA---GGGCATTCCAATAGTACACAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGTATATTGTCAT--------------ATATGTAATATATGCAGTA i chlSab2.chr6 I 615 C 0 s calJac3.chr22_GL285922_random 42759 214 + 138250 TTAGAGTCAGGCA-CTGCACACTGCCGTCCTCAGTGGGTGTGAGGAGTGTGACCTCAGACATTGCCGTCCCTTCATCTCCTCCCTCC-GTCTCCCAGTATTAAACAGTATCCAGCACGTGCA---CAATGAGACGCGTTTGTG-TAGACAGTTATTGTGAATAGTATTGCATGTCGTATATCATGGTCTTTCTTTTATTGTACATGCAGTACATGCAGTA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59944669 773 + 63644993 M a score=76116.000000 s hg38.chr19_GL949748v2_alt 1013747 27 + 1064304 AAACCCCACACTAATGGGATGCATTGG s panTro4.chr19 59945453 27 + 63644993 AAACCCCACACTAATGGGATGCATTGG i panTro4.chr19 M 773 C 0 s ponAbe2.chr19 56891311 26 + 60714840 -AAACCCACACTAATGGGATGCATTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370989 27 - 106955855 AAACCCCACACTAATGGGACGCACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60673156 27 + 64156825 AAACCCCACACTAATGGGATGCGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55814830 27 + 59248254 AAACCCCACACTAATGGGATGCGTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922038 27 + 51301725 AAACCCCACACTAATGGGATGCATTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625222 27 + 50890351 AAACCCCACACTAATGGGATGCATTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 42973 27 + 138250 GAACCCCACACTggccaggtgcggtgg i calJac3.chr22_GL285922_random C 0 I 1464 e canFam3.chr1 20089264 2803 - 122678785 I a score=591042.000000 s hg38.chr19_GL949748v2_alt 1013774 258 + 1064304 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGCGTGTAAGTCAGGACGTCTCAGCATGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGCTTGAATCAGTATTCCATGATTACATGATAGGATataatatatataata----atcgtttcaaatagcctgaaggaggatggggaaagttcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgattactatatgtatatacacat s panTro4.chr19 59945480 258 + 63644993 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGCGTGTAAGTCAGGACGTCTCAGCATGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGGTTGAATCagtattccatgattacatgataggatgtaatatatataata----atcgtttcaaatagcctgaaggaggatggggaaagttcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgattactatatgtatatacacat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891337 264 + 60714840 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGTGTGTAAGTCAGGACGTCTCAGCGTGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGGTTGAATCAATATTCCATGattacatgataggatgtaatatatataataatatatcatttcaaatagtctgaaggaggatggtgaaagtttccaacacaaagaaaagatgcatgtttgagaagatgggtgtgctacttaccctgatctgatcactatatgtatatacacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371016 258 - 106955855 GCTCCGAGGATGGAGCAGGATGGCGCCTCAGTGTGTAAGTCAGGGCGTCTCAGCACGTGCTGGCCATGGGTTTCCCGGTATTTACAGCATTTGGTTGGATCAATATTCCAtgattacataatagaatgtaatatatataata----acagtttcgaatagcctgaaggaggatggtgaaaattcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgatcactatatgtatatacacat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60673183 264 + 64156825 GCTCCAGGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTACAACGTTTGGTTGAATCGATATTCCATgattacatggtaggatgtaatatatatgataatatatcgtttcaagtagcctgaaggaggatggtgaaggttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctgatcgctatatgtatgtatacat i rheMac3.chr19 C 0 I 681 s macFas5.chr19 55814857 263 + 59248254 GCTCCAGGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTACAACGTTTGGTTGAATCGATATTCCGTgattacatggtaggatgtaatatatatgataatatatcgtttcaagtagcctgaaggaggatggtgaaggttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctgatcgctatatgtatgtataca- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922065 264 + 51301725 ACTGCAAGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTGCAACGTTTGGTTGAATCAATATTCCGTGATTACATGGTAGGATGTAATACATATGATAATATATCGTTTCAAGTAGCCTTAAGGAGGATGGTGAAAGTTCCCAACACAGAGAAAGGATGCATGTTTGAGAACATGGGTGTGCTgcttaccctgatctgatcactgtatgtatatacacat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625249 264 + 50890351 GCTCCAGGGATGCAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTTGCAGTATTTGCAACGTTTGGTTGAATCaatattctgtgattacatggtaggatgtaatacatatgatagtatatcgtttcaagtagccttaaggaggatggtgaaagttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctaatcactgtatgtatatacacat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=60907.000000 s hg38.chr19_GL949748v2_alt 1014032 58 + 1064304 atagtgcatatatgtaaacctacatctatacatacatgtgtatgtaCATATACACGTG s panTro4.chr19 59945738 58 + 63644993 atAGTGCAtatatgtaaacctacatctatacatacatgtgtatgtgcatatacatgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891601 58 + 60714840 atagtgcatatatgtaaacatacatctatacgtacatgtatatgtgcatatacatgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371274 54 - 106955855 atagtgcatatatgtaaacatacatcta----tacatgtatgtgtgcatATACCTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815120 14 + 59248254 --------------------------tgtgtgtatatgca------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922329 58 + 51301725 atagtgcatatatgtaaacatacatctgtgcgtacatgtatatgtgcatatacatatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625513 58 + 50890351 atagtgcatatatgtaaacatacatctgtgcatacatgtatatgtgcatatacatatg i chlSab2.chr6 C 0 I 54 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=29762.000000 s hg38.chr19_GL949748v2_alt 1014090 58 + 1064304 tgtacatacacacgtgtat----atgtatgtatatgtatatatgtatgcatgtgtgtgtgtg s panTro4.chr19 59945796 54 + 63644993 tgtacatacacatgtgtat----atgtatgtatacgtat----gtatgcatgtgtgtgtgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891659 62 + 60714840 tGtacatacatatacatataggcatatatgtatacatatgtgtatatgcatgtgtgtgtata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371328 58 - 106955855 TGTACatacatatacatac----atgtgtatgtatacatgtgtatatgcatGTGTGTGTATG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47922387 56 + 51301725 --tggacatatgtgtgtgc----acatatgtatacgcacacatatatgtatatgtgtgtata i papAnu2.chr19 C 0 I 4 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e chlSab2.chr6 47625571 54 + 50890351 I e macFas5.chr19 55815134 0 + 59248254 C e rheMac3.chr19 60673447 681 + 64156825 I a score=249796.000000 s hg38.chr19_GL949748v2_alt 1014148 158 + 1064304 t----------gtgtgtgtgtgtgtatacatatgtatacaaatacatgtacatAAGCGATCCCCTCCTGgaattgcttgagcccaggaggtcaagtctgctgtgaggtaagattgcaccactggccgggcacggtggctcatgcctataatcccagcactttgggagg s panTro4.chr19 59945850 144 + 63644993 t------------------------atacatatgtataCAAATACATGTACATAAGCGATCCCCTCCTGgaattgcttgagcccaggaggtcaagtctgctgtgaggtaagattgcaccactggccgggtgcagtggctcatgcctataatcccagcactttgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891721 144 + 60714840 t------------------------atatatatgtatacaaatacacgtatataAGCGATCCCCTCCTGggattgcttgagcccaggaggtcaaggctgctgtgaggtaagactgcaccacCagccaggcgcggtggctcatgcctataatcccagcactttgggagg i ponAbe2.chr19 C 0 I 2941 s nomLeu3.chr10 103371386 168 - 106955855 tatatatatatatatatatatatatatatatatGGATACAAATACATGTATATAAGCGATCCCCTCCTGggattgcttgaccccgggaggtcaagactgctgtgaggtaagattgcaccactggccgggcgcagtggctcatgcccataatcccagcactttgggagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815134 144 + 59248254 ------------------------tgtatatatgcatataaatacatatatataagtgaTCCCCTCCTGggattgcttgagcccaggaggtcaaggctgccgtgaggtaagattgcaccactggccaggcgcggtggctcacgcctataatcccagcactttgggagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922447 158 + 51301725 ----------tgtgtatatgcatgtgtatgtatgtatataaatacatgtatataagtGATCCCCTCctgggattgcttgagcccaggaggtcaaggctgccgtgagataagattgcaccactggccgggcgcggtggctcatgcctataatcccagcactttgggagg i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47625625 158 + 50890351 ----------tgtgtatatgcatgtatatatgtgtatataaacacatgtatataAGTGATCCCCTCCTGggattgcttgagcccaggaggtcaaggctgccgtgaggtaagattgcaccactggccaggcacggtggctcatgcctataatcccagcactttgggagg i chlSab2.chr6 I 54 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=411980.000000 s hg38.chr19_GL949748v2_alt 1014306 235 + 1064304 ccagggtgggcggatcacaaggtcaggagttcaagaccagcctggtcaacatggtgaaacaccatctctactaaaaataccagaaattagctgggcatggtggcacgtgcctgtaatcctagctactggggaggctgagtcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctc s panTro4.chr19 59945994 235 + 63644993 ccagggtgggcggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaagaaattagctgggcatggtggcacgtgcctgtaatcctagctactggggaggctgagtcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894806 235 + 60714840 ccagggtgggcggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcgggaggctgagtcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctt i ponAbe2.chr19 I 2941 C 0 s nomLeu3.chr10 103371554 234 - 106955855 ccagggtgggtggatca-aaggtcaggagttcaagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccctgcaggtggaggttgcagtgagccgagatcgtaccactgcattccagccttggtgacagagcgagattccatctt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815278 235 + 59248254 ccaaggtgggcagatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctgtactaaaaatataaaaaattagctgggcatggtggcacgtacctataatcccagctacttgggaggctgagtcacgagaattgcttgaacccaggaggtggaggttgcagtgagctgagatcgcaccactgcattccagcctgggcaacacagcaagactccatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922605 234 + 51301725 ccaaggtgggtggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatataaaaaattagctgggcatagtggcacatgcctataatcccagctacttgggaggctgagtcaggagaattacttgaacccgggaggtggaggttgcagcgagctgagatcgtaccactgcattccagcctgggcaacac-gcaagactccatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625783 235 + 50890351 tcaaggtgggcagatcagaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatataaaaaattagctgggcatggtggcacgtgcctgtaatcccagctacttgggaggctgagtcaggagaattacttgaacccaggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctgggagacacagcaagactccatctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=143443.000000 s hg38.chr19_GL949748v2_alt 1014541 141 + 1064304 gagg--aaaaaaaaaaa--tgatattgccccattgcactccagact-gacaacagagcaagaccctgtctcagaaaacgaagaggaggaggaaaaaaaaaGTACTAAttatctgaaattccaatttaaccaggcatccagtgtttt s panTro4.chr19 59946229 134 + 63644993 gagg--gaaaaaaaa----tgatattgccccattgcactccacact-gacaacagagcaagaccctgtctcagaaaaagaagaagag-----aaaaaaaaGTACTAAttatctgaaattccagtttaaccaggcatccagtgtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895041 140 + 60714840 gagg--aaaaaaaaaaaaTTgatattgcaccattgcactccagact-ggcaac-gagcaagaccctgtctcagaaaaagaagaagaggag--aaaaaaaagtactaattatctgaaattccaatttaaccaggcatccagtgtttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55815513 141 + 59248254 -gag--aaaaaaaaaat--tgagattgcaccactgcactcaagactgggcaacagagcaagaccctgtctcagtaaaataagaagaagagaaaaaaaaaGGTACTAAttatctgaaattcaaatttaaccaggcatccagtgtttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922839 135 + 51301725 -aag--aaaaaaaaaat--tgagattgcaccactgcactcaggactgggcaacagagcaagaccctgtctcagtaaaataagac------aaaaaaaaaggtactaattatctgaaattcaaatttaaccaaGCATCCAGTGTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626018 142 + 50890351 -aagaaaaaaaaaaaat--tgagattgcaccactgcactcaggactgggcaacagagcaagaccctgtctcagtaaaataagaagagga-gaaaaaaaaaGTACTAAttatctgaaattcaaatttaaccaagcatccggtgtttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=536423.000000 s hg38.chr19_GL949748v2_alt 1014682 684 + 1064304 atctggtaaccctCATTCTTacacacacac-------acacacacacacac------acacaAaggcgggatagttgtcattcccactgtaaacataaggaaactgggcagaggccaagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagctcatgtcttgactctgagctcagAGAGTGACAACTTGTCACCAGCGCCCCCATAGCCACCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACGCAAGCTCCG-GCCGCTTCTCTGTCCCCCTCCTCCTGCCGCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACGCTGTACCATGGCTGGGAGTCTTccaggcgccgtgctgagcgccttctgtgcatggactccaagtcgccataatcgtacgggttacccaccattatcagtcccctcttatacatcaggctagtgagacagtatcttatccacagtcctacagctggcagga-gtagattcaaaccctagcagCACCAATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggagtagagagcacagtggtggttacc-ggggcggtggggtaaggtttggggagatgttggtcagaggagg-acagtttcagttggacaagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta s panTro4.chr19 59946363 691 + 63644993 atctggtaaccctCATTCTTacacacacaccacacacacacacacacacac------acacaAaggtgggatagttgtcattcccactataaacataaggcaactgggcagaggccgagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagatcatctcttgactctgagctcagAGAGTGACAACTTGTCACCAGCGCCCCCGTAGCCGCCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTGTCCCCACCCTCCTGCCGCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACGCTGTACCATGGCTGGGAGTCTTccaggcgccgtgctgagcgcctgctgtgcatggactccaagtcgccataatcgtacgggttagccaccattatcagtcccctcttatacatcaggctagtgagacagtatcttatccacagtcctgcagctggcagga-gtagattcaaaccctagcagCGCCAATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggag-agagagcacagtggtggttaccaggggtggtgggttaaggtttggggagatgttggtcaaaggagg-acagtttcagttggacaagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895181 685 + 60714840 atctggtaaccctCATTCTTacacacacgc-------acacgcacacacac------acacaAaggtgggatagttgtcattcccactgtaaacataaggaaactgggcagaggatgagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagatcatctcttgactctgagctcagAGAGTGACAACTTGTCACCAGCTCCCCCGTGGCCACCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACCTAAGCTCCGTGCCGCTTCTCTGTCCCCCTCCTCCTGCCCCATCACAGCCCCCCTCAGCCTCTTTGTAGGTTTCCATGCGATGCTGTACCATGGCTGGGAatcttccaggcgccgtgctgagcgccttctgtgcatggactccaagtcaccataatcgtacgggttagctaccattatcagtcccctcttatacatcaggctagtcagacagtatcttatccacagtcctacagctggcagga-gtagatgcaaaccctagcagCACCGATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggagtagagagcgctgtggtggttaccaggggtggtggggtaaggtttgaggagatgttggtcaaaggagg--cagtttcagttggataagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47922974 672 + 51301725 ATCTGGTAACCCTcattcttacacacacac-------acacacacacacacacacacacacagaggcggGATAGTTGTCATTCCCACTGCAAAC--AAGGAAACTAGGCAGAGGCTGAGCAACCTTCCGTAGCTCACATAGCAAGAAGTGGGTGAACCCAGATCATCTCTTGACTCTGAGCTCAGAGAATGACAACTGGTCACCAGCTCCCCAGTGGCCACCACCCATTGTCGACCACAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTgtccccctcctcctgccccatcacagcccacctcagcctctttgtA---------GCAACCCTGTACCATGGCTGGGAACCTTCCAGGTGCCGGGCCGAGCGCCTCCTGTGCGTGGACTCCAAGTCGCCGTAATCGCACGGGTTAGCTAACGTTATCAGTCCCCTCTTACACATCAGGCTAGTGAGACAGAATCTTATCCACAGTCCTACACCTGGCAGGAGGGGAGTTCAAACCCTAGCAGCACCGTTTAGTGGTAAAGAGTGTGGACCTGGGAATTTACAGGAGCAGA---------GGTGGTTACC-GGGGTGGTGGGGTAAGgtttggggagatgttggtcgaAGGAGACACAGTTTTAGTTGGACAGGAGGAGTGTATCTTGGAGATCTATTGCACATcgtggtgactgtagtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626160 651 + 50890351 atctagtaaccctCATTCTTacacacacac-------acacacacacacac------------aggcaggatagttgtcattcccactgcaaac--aaggaaactgggcagaggctgaacaaccttctgtagctcacatagcaagaagtgggtgaacccagat-gtctcttgactctgagctcagAGAGTGACAACTGGTCACCAGCTCCCCAGTGGCCACCAGCCTTTGTCAACCACAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTGTCCCCCTCCTCCTGCCCCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACCCTGTACCATGGCTGGGAACCTTCCAGGTGCCGTGCTGAGCGCCTCCTGTGTGTGGACTCCAGGTCGCCGTAATCGTACGGGTTAGCTACCGTTATCAGCCCCCTCTTACACATC-----------------TCTTATCCACAGTCCTACACCTGGCAGGAGGTGGGTTCAAACCCTAGCAGCACCGTTTAGTGGTGGAGAGTGTGGACTTGGgaatttacaggagcaga---------ggtggttacc-ggggtggtggggtaaggtttggggagatgttggtcaaaggagacacagtttcagttggacaggaggagtgtgtcttggagatctattgcacgtcgtggtgactgtagtta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e macFas5.chr19 55815654 0 + 59248254 C e rheMac3.chr19 60673447 681 + 64156825 I a score=244771.000000 s hg38.chr19_GL949748v2_alt 1015366 200 + 1064304 ataacaacatattgtacacttgcatatcaccgatagtagattttaaatgttctcaccggccgggcgcgctggctcacacctgtaatcc---cattttgggaggccaaggtgggcggatcacctgaagtcaggagttcgagagcagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcggggcgta s panTro4.chr19 59947054 200 + 63644993 ataacaacatattgtacacttgcatatcactgatagtagattttaaatgttctcaccggctgggcgcggtggctcacacctgtaatcc---cattttgggaggccaaggtgggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccctgtctctgctaaaaatacaaaaattagcggggcgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895866 200 + 60714840 ataacaacatattgtacacttgcatatcactgagagtagattttaaatgttctcaccggccgggcgcggtggctcacgcctgtaatcc---cattttgggaggccgaggtgggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagtggggcgtA i ponAbe2.chr19 C 0 M 221 s macFas5.chr19 55815654 201 + 59248254 atAACAACATATTGCACACTCGCATATCACTGAGAGTAGGTTTTAAA-GTTCTCACTggccaggcgcagtggctcacacctgtaatcccagcattttgggaagccaaggcgggtggctcacctgaagtcaggagttcaagaccagcctgaccaacatgg-gaaaccctgtctctagtaaaagtacaaaaataagctgggcgta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923646 202 + 51301725 ataacaacATATTGCACACTCGCATATcactgagagtagattttaaa-gttctcactggccaggcgcggtggctcacacctgtaatctcagcattttgggaagccaaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctactaaaagtacaaaaataagatgggcgta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626811 202 + 50890351 ataacaacatattgcacactcgcatatcactgagagtagattttaaa-gttctcacTggccgggcgcggtggctcatgcctgtaatcccagcattttgggaagccaaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaacccctgtctctactaaaagtacaaaaataagctgggcgta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=13116.000000 s hg38.chr19_GL949748v2_alt 1015566 14 + 1064304 gtggcaggagcctg s panTro4.chr19 59947254 14 + 63644993 gtggcaggagcctg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55815855 14 + 59248254 gtggtaggagcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923848 14 + 51301725 gtggcaggagcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627013 14 + 50890351 gtggcaggagcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56896066 221 + 60714840 M e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=249195.000000 s hg38.chr19_GL949748v2_alt 1015580 203 + 1064304 taatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccaacgtcatgccactgcgctccagtctgggcaacagagtgagactccatgtcaaaaaataaaaataaataaaaataaaTGAGcgtggaatactactcagccattaaaaggagtgaaataatgtcttttggcca s panTro4.chr19 59947268 203 + 63644993 taatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaatgtcatgccactgcactccagtctgggcaacagagtgagactccatgtcaaaaaataaaaataaataaaagtaaaTGAGcgtggaatgctactcagccattaaaaggagtgaaataatgtcttttggcca i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60674128 197 + 64156825 taatcccagctacccaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcggtgagctgacatcacaccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacaaaataatgtcctttggcca i rheMac3.chr19 I 681 C 0 s macFas5.chr19 55815869 197 + 59248254 taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcggtgagctgacatcacaccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacagaataatgtcctttggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923862 197 + 51301725 taatcccagctactcaggaggcagaggcaggagaatcacttgaacctgggagatggaggttgcagtgagttgacatcatgccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaatcagtaaaaataaatgagtgtgaaatactactcagccattaaaaggaacaaaataatgtcctttggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627027 197 + 50890351 taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagctgacatcatgccactgcactccagcctgggcgacagagtgagactccatgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacaaaataatgtcctttggcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56896066 221 + 60714840 M e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C a score=461889.000000 s hg38.chr19_GL949748v2_alt 1015783 276 + 1064304 ggcacagtggctcacatctgtaatgccagcactctgggaggccgaggtgggtggatcacgaggtcaagagatcaagaccatcctgcccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttaaacccgggaggtggagtttgcagtaagccgagatcacaccactgcactccagccttggtgagagagcgagattccgtcttt s panTro4.chr19 59947471 276 + 63644993 ggcacagtggctcacatctgtaatgccaatactctgggaggccgaggtgggtggatcacgaggtcaagagatcaagaccgtcctgcccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttaaacccgggaggtggagtttgcagtaagccgagatcacaccactgcactccagccttggtgagagagcgagattccgtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56896287 276 + 60714840 ggcacagtggctcacatctgtaatgccagcagtctgggaggtcgaggcaggtggatcacgaggtcaagagatcaagaccatcctccccaacacggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggtggagtttgcggtgagccgagatcacaccactgcactccagcctcggtgagagagcgagattccgtctta i ponAbe2.chr19 M 221 C 0 s rheMac3.chr19 60674325 271 + 64156825 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctggctaacacggtgaaa-cccgtctctactaaaaatacaaaaattagccgggcgtggtgac-ggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagctgagatcacgctgctgtactccagtctcggc--aacagcgagattccagctc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816066 271 + 59248254 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctggctaacacggtgaaa-cccgtctctactaaaaatacaaaaattagccgggcgtggtgac-ggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagctgagatcacgctgctgtactccagtctcggc--aacagcgagattccagctc- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924059 273 + 51301725 ggcacagtggctcacgcctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctcctcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagccaagatcacgctgctgTACTCCAGTCTCAGC--AAcagccagattccatctc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627224 273 + 50890351 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggccggtggatcatgaggtcaagagatcaagaccatcctcctcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagccgagatcatgctgctgtactccagcctcggc--aacagccagattccgtctc- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C a score=16509.000000 s hg38.chr19_GL949748v2_alt 1016059 14 + 1064304 aaaaaaaaaaaaaa s panTro4.chr19 59947747 14 + 63644993 aaaaaaaaaaaaaa i panTro4.chr19 C 0 I 185 s ponAbe2.chr19 56896563 8 + 60714840 aaaaaaaa------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371788 14 - 106955855 aaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60674596 11 + 64156825 aaaaaaaaaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816337 10 + 59248254 -aaaaaaaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924332 11 + 51301725 aaaaaaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627497 11 + 50890351 aaaaaaaaaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=1447791.000000 s hg38.chr19_GL949748v2_alt 1016073 632 + 1064304 aaagtcttttgcagcaacttggatggagctggaaggcattattctaagtaaagtaatacaggagtggaaaacaaaaatctgtatattctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcagagactcagaagggaagggcagaagtggggcagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaacaa----GCCAGATGCAGTAACCTGTACAGGCcacacctgtaaccccaacactttgggaggccgaggtgggtggatcgcttgagcccaggagttcaagaccagcctgggcaacatagcg-gacccccgtaact-aaaaaaattacaaaaacaagccaggcatgatggtgtacaactgtagttccagatactcaggaggctgatggggaggcactggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgccctcctgcctgggtgacagaagtgaggccctatctcaaataaaattaaataaataa s panTro4.chr19 59947946 632 + 63644993 aaagtcttttgcatttacttggatggaactggaaggcattattctaagtaaagtaatacaggagtggaaaacaaaaatctgtatattctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcagagactcagaagggaagggcagaagtggggtagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaacaaTTAAGCCAGATGCAGTAACCTGTACAGGCcacacctgtaaccccaacactttgggaggccgaggtgggtggatcgcttgagcccaggagtttgagaccagcctgggcaacatagcgagacccccataact-aaaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaggcattggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgccctccagcctgggtgacagaagtgaggccctatctc-----aaattaaataaataa i panTro4.chr19 I 185 C 0 s ponAbe2.chr19 56896571 638 + 60714840 aaagtcttttgcagcaacttggatggaggtggaaggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcggagactcagaagggaagggcagaaggcgggtagggatgaaaaactacacattaggtacaaggtacagtagtcaggtgacaggtgcactaaaatctcagaattcaccagaatagaattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcacacctgtaaccccagcactttgggaggctgaggtgggtggatcgcttgagcccaggagttcgagaccagcctgggcaacatagtgagacccccgtaactaaaaaaaatcacaaaaatcagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggagggattgattgagcctgggaggttgaggctgcagtgagccatgatcatgccactgcactccagcctgggccacagaagtgaggccctgtctcaaataaaattaaacaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371802 631 - 106955855 aaagtcttttgcagcaacttggatggagctggaaggcattattct-----aagtaacacaggagtggaaaacaaaaatctgtattttctcacttataagtgagacctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatcgacttcagacactcagaagggaagggcagaaggggggtagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataatccatccacataaccaagaaccacttgtatcccaaaagctgttgaagcaaaCATTAAGCCAGATGCAGTAACCTGTAGAGGtcacacctgtaaccccaacactttgggaggctgaggtgggtggattgcttgagcccaggagttcgagaccagcctgggcaacatagcgaga-ccccgtaact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctattcaggaggctgatggggaaggactggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgtactccagcctgggtgacagaagtgaagccctgtctcaaataaaattaaataaataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60674607 630 + 64156825 at-gtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacagggtgatgtaatggacttcagagactcagaagagaagggcagaaggtgggtagggatgaaaaactacacattaggtacaaggtatactactcaggtgacaggggcactaaaatctcagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcaaacctgtaaccccaacactttgggaggccgaggtaggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaaggatcggttgagcctgggaggttgaggctagagtgagccatgatcatgccactgcactccagcctgggtgacagaa--gaggccctgtctcaagtaaaattaaataaataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816347 632 + 59248254 at-gtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacagggtgatgtaatggacttcagagactcagaagagaagggcagaaggtgggtagggatgaaaaactacacattaggtacaaggtatactactcaggtgacaggggcactaaaatctcagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcaaacctgtaaccccaacactttgggaggccgaggtaggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaaggattggttgagcctgggaggttgaggctagagtgagccatgatcatgccactgcactccagcctgggtgacagaagtgaggccttgtctcaagtaaaattaaataaataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924343 622 + 51301725 acagtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatc--tatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacggGGTGATGTAATGGACTTCAGAGACTCAGAAGGGAAAGGCAGAAGGGGGGTAGGGATGAAAaactacacattaggtacaaGGTATACTACTCAGGTGACAGgggcactaaaatctcagaattcaccactatatagTTCATCCATGTAATCAATAACCACTTGTATCCCAAAAGCAATTGAAGCAAAAATTAAGCCAGAGGCAGTAACCTGTACaggtcacacctgtaaccccaatgctttgggaggccgaggtgggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcaaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtggttccagctactcaggaggctcatggggaaggattggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgcactccagcctgggtgacagaagtgaggccctgtctcaagtaaaatt---------a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627508 634 + 50890351 aaagtc--ttgcagcaacttggatgtagctggaaggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctc----acaagtgagagctaagctgtgggtgtgcgaaggcgtatatacagggtgatgtaatggacttcagagactcagaagggaagggcagaaggggggtagggatgaaaaactacacattaggtacaaggtacactactcaggtgtcaggtgcactaaaatcccagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGAGGCAGTAACCTGTACAGGtcacacctgtaaccccaacactttgggaggccgaggtgggtggatggcttgaacccaacagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaacaattacaaaaatgagccaggcgtgatggtgtgcaactctagttccagctactcaggagactgatggggaaggattggttgagcctgggaggtggaggctgcagtgagccatggtcatgtcactgcactccagcctgggtgacagaagtgaggccctgtctcgagtaaaattaaataaataa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=715218.000000 s hg38.chr19_GL949748v2_alt 1016705 273 + 1064304 aaGTTAAAAC-Aggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtgga--acctgaagtaaggagcttgagaccagcctggccaacatggtgaaaccccgcccctactaaaaatacaataatt-agccagacctggtggcagatgcctgtaatcccaactattcgggaggctgaggcaggagaatcacttggacccgggaggcagagtttgcagtgagctgagatcatgccattgcattccagcctgagcgac s panTro4.chr19 59948578 273 + 63644993 aaGTTAAAAC-Aggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtgga--acctgaagtaaggagctcgagaccagcctggccaacatggtgaaacgccgcccctactaaaaatacaataatt-agccagacctggtggcagatggctgtaatcccaactactcgggaggctgaggcaggagaatcacttggacccgggaggcagagtttgcagtgagctgagatcatgccattgcactccagcctgagcgac i panTro4.chr19 C 0 M 571 s ponAbe2.chr19 56897209 275 + 60714840 aaGTTAAAAC-Aggccggacacagtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatt-agccagacctggtggcggatgcctgtaatcccagctactcgcgaggctgaggcagaagaatcacttggacccgggaggcggagtttgcagagagctgagatcatgccattacactccagcctgagcgac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372433 275 - 106955855 aGGTTAAAAC-Aggccgggcgcggtgcctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaagtcaggagttcgagaccagcctggccaacatggtgagaccccgtctttactaaaaatacaaaaatt-agccagacctggtggcagatgcctgtaatcccagctactcgggagtctgaggcaggagaatcacttggacccgggaggcggagtttgcagtgagctgagatcacaccactgcactccagcctgtgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675237 275 + 64156825 aaGTTAAAAC-Aggccggatgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggtagatcacctgaagtcaggagttcaagtccagcctggtcaacatggtgaaaccccgtctctactaaaaatataaaaatt-agccggacctggcggtggatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggcagagtttgcagtgagccaagatcgtgccactgcactccagcctgagcaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816979 275 + 59248254 aaGTTAAAAC-Aggccggatgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggtagatcacctgaagtcaggagttcaagtccagcctggtcaacatggtgaaaccccgtctctactaaaaatataaaaatt-agccggacctggcggtggatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggcagagtttgcagtgagccaagatcgtgccactgcactccagcctgagcaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924965 276 + 51301725 aagttaaaac-aggctggacgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcaggtggatcacctgaagtcaggagttcaagtccagcctggccaacatgttgaaaccctgtctctactaaaaatataaaaattaagcgGGAcctggtggtagatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggctgagtttgcagtgagccaagatcgtgccactgcactccagcctgagcgac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628142 275 + 50890351 aaGTTAAAAC-Aggccggacgcggtagctcacgcctgtaaccccagcactttgggaggccgaggcggggggatcacctgaagtcaggagttcaagtccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaatt-agccggacctggtggtagatgcctgtaatcccagctacttcagaggctgaagcaggagaatcacttggacctgggaggcggagtttgcagtgagctgagatcgtgccactgcactccagcttgagcgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 44464 227 + 138250 aagcaaaaaCGAAGCCAGACACTGTGGCTCACACCTGTAACccc----------------------------------------aggagttcaagaccagcctgggcaacatagcgagatcctgt---------aactacgaaaatt-agccaggcgtgatggtatgcagctggagttccagctactcaggagatagagggggagggattgcttgagcctgggaggtggaggttgcagtgagccatgatcgtgccactgcactccagcctgggtgac i calJac3.chr22_GL285922_random I 1464 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=415583.000000 s hg38.chr19_GL949748v2_alt 1016978 213 + 1064304 cgactgagcgagactccatctc------aa---aaaacaaacaaaaa-----gaaaaaaagaaTACATCCATGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAATGCAACCATCTTCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA s ponAbe2.chr19 56897484 206 + 60714840 cgactgagcgagactccatctc------aa---aaaacaaacaaaca------------agaaTACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAATACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTATCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372708 216 - 106955855 cgactgagcgagactccatctc------aa---aaaaaaaaaaaaaaaacaaaaaaaaCAGAACACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCTTCTCATCTCCAGT--TACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675512 220 + 64156825 caacagagcgagactccatctcaaaaaaaa---aaaaaaaaaaaaaaGTT-------AAAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817254 214 + 59248254 caacagagcgagactccatctc------aa---aaaaaaaaaaaaaaGTT-------AAAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925241 204 + 51301725 caacagagcgagactccgtcta---cacaa---aaaaaaaaaaaaaatttt-aaaacaaagaatacaCCCATGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACTCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCTTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAAT------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628417 213 + 50890351 caacagagcgagactccatctc-------a---aaaaaaaaaaaaaaGTT-------AGAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAGATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 44691 205 + 138250 ---aaaagtgagaccctgtctc------aaaTCAAATTACATAAAAATTA-------AAATACTACGTCCATGTATGAAT----GATGAGAGGTTGTTTATTGTCACAGTTTACCC-----TCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTCTTGGAGACGCTGTCCCGCTAGTGGTCAAATTCTCCTGAAGAAATAAGGCAATAATGCATTCGACGTGCCta i calJac3.chr22_GL285922_random C 0 I 120 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59948851 571 + 63644993 M a score=6620.000000 s hg38.chr19_GL949748v2_alt 1017191 5 + 1064304 GCACA s ponAbe2.chr19 56897690 5 + 60714840 GCGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372924 5 - 106955855 GCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675732 5 + 64156825 GCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817468 5 + 59248254 GCACA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47628630 5 + 50890351 GCACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 44896 120 + 138250 I e papAnu2.chr19 47925445 0 + 51301725 C e panTro4.chr19 59948851 571 + 63644993 M a score=190398.000000 s hg38.chr19_GL949748v2_alt 1017196 91 + 1064304 AGTGAAGATCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCCATCAGGAGAC---TATTTACTCCACTACTGTAGGGGATACTGACAAATT s ponAbe2.chr19 56897695 94 + 60714840 AGTGAAGATCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCCATCAGGAGACTCTTATTTACTCCACTACTGTAGGGGATACTCACAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372929 94 - 106955855 AGTGAAGATCAGGCAGCAGAAATGTATTCGACCTGCCACCCATCCGTCAGGAGACTCTTATTTACTCCACTACTGTAAGGGATACTGACAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675737 94 + 64156825 AGTGAAGAGCAGGCAGTGGAAATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTACTTACTCCACTGCTGTAGGGGATACTGACAAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817473 94 + 59248254 AGTGAAGAGCAGGCAGTGGAAATGCATTCGACCTGCCACCCATCGGTCAGCAGACTCTTACTTACTCCACTGCTGTAGGGGATACTGACAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925445 74 + 51301725 --------------------AATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTATTTACTCCACTGCTGTAGGGGATACTGACAAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628635 93 + 50890351 AGTGAAGAGCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTA-TTACTCCACTGCTGTAGGGGATACTGACAAATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45016 90 + 138250 AGTGAGGAATAGGCAGCAGAAATGCATTTGACCCATCACCCATCCTTCAAGAGACTC----TTACTCCACTACTATAGGTGATACTGACAAATT i calJac3.chr22_GL285922_random I 120 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59948851 571 + 63644993 M a score=813299.000000 s hg38.chr19_GL949748v2_alt 1017287 294 + 1064304 AAATCCAT-ACCTAGTCCAGATATCA---ATTCCACAAtttttttttttttt-----------tttttgagacggagtttcgctcttgttgcccaggccagagtgcaatggtgtgatcttggctcaccgcaacctccacctcccaggttcaagcgattctcctgccttagcctccagagtagctgggattacaggcatgtgccaccacacccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccgacctcagatggcccacccgcctcggcctcc s panTro4.chr19 59949422 292 + 63644993 AAATCCAT-ACCTAGTCCAGATATCATCAATTCCACAAtttttttttttttt----------------gagacggagttttgctcttgttgcccaggccagagtgcaatggtgtgatcttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgccttagcctccagagtagctgggattacaggcatgtgccaccacgcccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccaacctcagatggcccacccgcctcggcctcc i panTro4.chr19 M 571 C 0 s ponAbe2.chr19 56897789 306 + 60714840 AAATCCAT-ATCTAGTCCAGATATCATCAATTCCACAAttttttttttttttttttttttttttttttgagacggaatttcgctcttattgcccaggccggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcccgggttgaagcgatcctcctgcctgagcctccaaagtagctgggattacaggcctgtgccaccatgcccaactaattttgtatttttagtagagatggggtttctccatg-tggtcaggctgg-ctccaactcccgacctcaggtgacccacttgccttggcctcc i ponAbe2.chr19 C 0 T 4579 s nomLeu3.chr10 103373023 295 - 106955855 AAATCCAT-ACCTAGTCCAGATATCATCAATTCCACAAtttttttttttttt-------------tttgagacagagttttgctcttgttgcccaggccagaatgcaatggtgtgatcttggctcaccacaacctctgccttctgggttcaagtgattctcctgcctcagcctccagagtagctgggattacaggcatgtaccaccacacccggctaattttgtatttgtagtagagatggggtttctccatgttggtcaggctagtctcaaactcccgacctcaggtgacccacccgcctcagcctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675831 304 + 64156825 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAATTtttgtttgtttg-----tttgtttttttgagatggagttttgctcttgttgcccaggccggagtgtaatggcgtgatctcggctcactgcaacctccgcctcccagattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgcgccaccacgcccagataattttgtattttcagtagagatggggtttctccgtgttggtcaggctggtctccagctcccaacctcaggtgatccgtccgcctcggtctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817567 304 + 59248254 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAAtttttgtctgtttg-----tttgtttttttgagatggagttttgctcttgttgcccaggccggagtgtaatggcgtgatctcggctcactgcaacctccgcctcccagattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgtgccaccacgcccagataattttgtattttcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatccgtccgcctcggtctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925519 303 + 51301725 AAATCCATAACCTAGTCCAGATATCATGAagtccactaatttt-tttttttt-----tttttttttttgaaacggagttttgctcttgttgcccaggccggagcgtaatggtgtgatctcggctcaccgcaacctccgcctcccggattcaagcaattctcctgcctcagcctccagagtagctgggattacaggcatgcaccaccacgcccagataattttgtatttgcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcagatgatccatccgcctcggtctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628728 304 + 50890351 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAAtttttgttcgtttg-----tttgtttttttgagacggagttttgctcttgttgcccaggctggagtgtaatggtgtgatctcggctcaccgcaacctccccctcccggattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcgtgcgccaccacgcccagataattttgtattttcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatccgtccgcctcggtctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45106 299 + 138250 CAGCCCATAACCTTGTCCTGATATCA---AGTCCACAttttttttttttttt-------tttttttttgagaccgagtttcgctcttgttgcccaggctggagtgcaatggcgcattctcagctccccacaacctccgcctcctggtttcaagtgattctcctgcctcagcctccagagtagctaggattacaggtatgtaccggcatgtctggctaactttgtatttctagtagaaacagggtttctccatgttggtcaggctggtcttgaactcccaagctcaggtaatccacccacctcaccctcc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=44023.000000 s hg38.chr19_GL949748v2_alt 1017581 41 + 1064304 caaagtgT-------------GTAAGCCATGGCACTCAGCCttttttttttttt s panTro4.chr19 59949714 41 + 63644993 caaagtgT-------------GTAAGCCATGGCACTCAGCCttttttttttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103373318 39 - 106955855 caaagtgc-------------ATGAGCCATGGCACTCAGCtttttttttttt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676135 27 + 64156825 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55817871 27 + 59248254 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47925822 27 + 51301725 caaagtgc-------------gtgagccacggcactcagc-------------- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47629032 27 + 50890351 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 45405 50 + 138250 caaagtgctgggattacgggtgacagccaccacgcccggccAtttttttt---- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56898095 4579 + 60714840 T a score=818842.000000 s hg38.chr19_GL949748v2_alt 1017622 288 + 1064304 ttttttttttttttgagatggaggctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccacgtagctgggattacaagcacc-cgccatcacgcccggcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaggttgagattacaggcgtgagccactgtgcctggccCACA s panTro4.chr19 59949755 281 + 63644993 ttttttt-------gagatggaggctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccgcgtagctgggattacaagcacc-cgccatcacgcccggcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaggttgagattacaggcgtgagccaccgtgcctggccCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893516 286 + 60714840 ttttttttttttttgaaatggagtctttctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccatctcagcctcc--cgtagctgggattacaggcacc-cgccatcacacccagcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaagtcctgacctcaggtgatccacccacctcagcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i ponAbe2.chr19 T 4579 C 0 s nomLeu3.chr10 103373357 284 - 106955855 ttttttttttttttgagacagag----tctctgttgcccaggctggagtgcaat-gcctaacctcagctcactgcaacttttgcctcctggtttcaagcaattctcccacctcagcctcccgcgtagctgggattacaggcacc-cgccatcatgcccggcta--------atttttgtagagatggggtttcacaatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676163 282 + 64156825 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctctcgagtagctgggattacaggcaccgccccgtcatacccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55817899 282 + 59248254 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctctcgagtagctgggattacaggcacccccccgtcatgcccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttcagattacaggcatgagccaccgtgcctggccCACA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47925850 279 + 51301725 ttttttt-------gagacaga--ctctctctgttgcccaggctggagtgcaat-gcctgacatcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctcccgagtagctgggattacaggcacc-ccccatcatgcccggcta--------atttttgtagagacggggttttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggcccaca i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47629060 281 + 50890351 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcattgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccgagtagctgggattacaggcacc-ctccatcatgcccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACG i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 45455 298 + 138250 ttttttttttttttgagactgag--tctctctgttgtgcaggctggagtgcagtggtgtgatctcagctcactacaacttctgcttcccaggttcaagtgattcacctgcctcagcccccagagtagctgggataacaggcacc-tgctatcattcctggctaatttttgtatttttgtagagacagggtttccccatgttaaccaggctggtctcgaactcctgacctctggttatccacccacctcagcccccccaaaatgttgagattacaggcatgagccaccgtgcccggccCACA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=7020.000000 s hg38.chr19_GL949748v2_alt 1017910 4 + 1064304 TTTT s panTro4.chr19 59950036 4 + 63644993 TTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893802 4 + 60714840 TTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373641 4 - 106955855 TTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676445 4 + 64156825 GTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818181 4 + 59248254 Gttt i macFas5.chr19 C 0 I 219 s papAnu2.chr19 47926129 4 + 51301725 gtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629341 4 + 50890351 GTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45753 4 + 138250 TTTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20092067 4 - 122678785 TTTT i canFam3.chr1 I 2803 C 0 a score=123300.000000 s hg38.chr19_GL949748v2_alt 1017914 40 + 1064304 TTAAAAAAGGGGCAACTGCAGTGTAGTAGAACAAAGTTGT s panTro4.chr19 59950040 40 + 63644993 TTTAAAAAGGGGCAACTGCAGTGTAGTAGAACAAAGTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893806 40 + 60714840 TTTAAAAAGGGGCAATTGCAGTGTAGTAGAACAAAGTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373645 40 - 106955855 TTAAAAAAGGGGCAACTGCAGTGTAGCAGAACAAAGTTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676449 40 + 64156825 TTTAAAAAGGGGCAACTGCAGTGTCGTAGGACAAAGTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818404 40 + 59248254 TTTAAaaaggggcaactgtagtgtcgtagaacaaagttgt i macFas5.chr19 I 219 C 0 s papAnu2.chr19 47926133 40 + 51301725 TTTAAAAAGGGGCAACTGCAGTGTCATAGAACAAAGTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629345 40 + 50890351 TTTAAaaaggggcaactgcagtgtagtagaacaaagttgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45757 39 + 138250 TTTTAAAAGGGG-AACTGCAGTGTAGTGGAACAAAGCTGT i calJac3.chr22_GL285922_random C 0 M 552 s canFam3.chr1 20092071 32 - 122678785 TTAAAAAA--------CACAGTGTATAGAGACAAAGTTGT i canFam3.chr1 C 0 C 0 a score=48048.000000 s hg38.chr19_GL949748v2_alt 1017954 20 + 1064304 GACCAATGCTAGGATA-CTCT s panTro4.chr19 59950080 20 + 63644993 GACCAATGCTAGGATA-CTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893846 21 + 60714840 GACCGATGCTAGGATACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373685 21 - 106955855 GACCAATGCTAGGATACCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676489 21 + 64156825 GACCAATgctaggacacctct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818444 21 + 59248254 gaccaatgctaggacacctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926173 21 + 51301725 GACCAATGCTAGGACACCTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629385 21 + 50890351 gaccaatgctaggatacctct i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20092103 19 - 122678785 AGCCAAAACTGGAAGACCT-- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 45796 552 + 138250 M a score=441965.000000 s hg38.chr19_GL949748v2_alt 1017974 141 + 1064304 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAA--ATGCCAGCTCGCTGGCCCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTTACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- s panTro4.chr19 59950100 141 + 63644993 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAA--ATGCCAGCTCGCTGGCCCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTTACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893867 143 + 60714840 GTTCATCTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAAACATGCCACCTCGCTGGCCCCCCATTTCCCCACCCAACAAATGAAGGGGCTCTCACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373706 142 - 106955855 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAAACACGCCACCTCGCTAG-CCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTCACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676510 143 + 64156825 gttcatttcctgacccagccacgaatacactggaataactcaggcaaaatacaccacctcgctggccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818465 143 + 59248254 gttcatttcctgacccagccacgaatacactggaataactcaggcaaaatacaccacctcgctggccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926194 142 + 51301725 GTTCATTTCCTGACCCAGCCACGAATACGCTGGAATAACTCAGGCAAAACACACCACCTCGCTAGCCCTCCACTT-CCCACCCAACCAATGAAGGGGCTCTCATAGGTCCCTTTTTGTCCTGAAATTCATCACCGATGCAAAT---------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629406 143 + 50890351 gttcatttcctgacccagccacgaatacgctggaataactcaggcaaaatacaccacctcgctagccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46355 143 + 138250 GTCTATTTACTGACCCAGCCATGAATAAACTGGAATCACTCATACAAAACACTCCACTTTGCTGGCCCCTCATTTCCCCACCCAGCAAACCAAGGGGCTCTCATAGGTCCTTTTTTGTCCTGAAATTCATTACTGATACAAAt---------------------------------- i calJac3.chr22_GL285922_random M 552 I 302 s canFam3.chr1 20092122 176 - 122678785 ATTTATTTCCTGACCTAGCCAAGAAGGGAATAGAACATAATAACAGACAAACACCACCTCCCAGG-TCCCAGTTTTCCCAACCAAGAAATGAAGGGGCCCTCAGAGGTCACCAATTGCCCTGAAATTCATTTCTGAAGAGAAACCAGAGTATTGCTGAAATTCATTTCTGATGCAAT i canFam3.chr1 C 0 C 0 a score=177098.000000 s hg38.chr19_GL949748v2_alt 1018115 56 + 1064304 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC s panTro4.chr19 59950241 56 + 63644993 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894010 56 + 60714840 TTC-T---TAAAAATCCTTTGCCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373848 56 - 106955855 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGCCCTTCAGCATTTCCCAGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676653 57 + 64156825 TTCTT---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818608 57 + 59248254 TTCTT---AAAAAATCCTTTGTCTGGCAGTCTA-GGCTTGTCTTTCAGCACTTCCCAGATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926336 56 + 51301725 TTC-T---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629549 57 + 50890351 TTCTT---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46800 56 + 138250 TTC-TTAAAAAAAATCCTTTGGCTGGCAGTCCA-TGCCTGCCCATCAG---TTCCCAGATC i calJac3.chr22_GL285922_random I 302 C 0 s canFam3.chr1 20092298 57 - 122678785 TTT-T---TAAACATTCTTAGTCTCATAGCCTACTGCCTGTCCCTCAGCATTTCCCAGATC i canFam3.chr1 C 0 I 349 a score=1560.000000 s hg38.chr19_GL949748v2_alt 1018171 2 + 1064304 TG s panTro4.chr19 59950297 1 + 63644993 -G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894066 1 + 60714840 -G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373904 1 - 106955855 -G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676710 1 + 64156825 -G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818665 1 + 59248254 -G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926392 1 + 51301725 -G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629606 1 + 50890351 -G i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46856 1 + 138250 -C i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20092355 349 - 122678785 I a score=1079094.000000 s hg38.chr19_GL949748v2_alt 1018173 303 + 1064304 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCACCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTTGTCCGCCTGCTGGGGCCTGG s panTro4.chr19 59950298 303 + 63644993 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCACCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCACGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTTGTCCGCCTGCTGGGGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894067 303 + 60714840 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTAGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCACACTTATCTCCTCTGGCCAGCCTGGCATTGTACCGTTCGTCCGCCTGCTGGGGCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373905 299 - 106955855 ACCCTCAGGACTCACCAAGACAGAGGAGGGCAGTCGGGGATGGAGACATGGTTCCTCAGC-----CCTGAGCTCTGTGGCCAGGGAAGGGAAGTGGTGGCAGCCTGGGGCACAGGCTCAGGATGTGATGAGGGTGAAGAATGCTCTCCTCCCTTCCCCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTCGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCTGCGCTTATCTCCTCTGGCCAGCCTGGGGTTGTACCGTTCGTCCGCCTGCTGGGGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676711 302 + 64156825 ACCCTCAGGACTCACCGAGACAGAAGAGGGTGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGGGTTCTGTGGCCCGGG-AGGGAAGTGGTGGGAGCCT-GGGCACGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCTGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCCGCCTGCTGGGGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818666 302 + 59248254 ACCCTCAGGACTCACCGAGACAGAAGAGGGTGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGGGTTCTGTGGCCCGGG-AGGGAAGTGGTGGGAGCCT-GGGCACGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCCGCCTGCTGGGGCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926393 303 + 51301725 ACCCTCAGGACTCACCAAGACAGAAGAGGGCAGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGGGGGAGCCTGGGGCACGGGCTCAGGATGTGATGAGGTTGAAGAatgctctcctcccttcctccgcCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCAGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCTGCCTGCTGGGGCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629607 302 + 50890351 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCT-GGGCATGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCTGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCAGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCATTCGTTCGCCTGCTGGGGCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46857 303 + 138250 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCAGGGATGGAGACATGGTTCCTCGGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGTCGGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCCCTCCTCCCTTCCTTCACCAGCCCCGGCCTTTCCTAATTGAGGCTCATCGAGCTGTAGCCGGCTCCTCAGTACTGTGACTTGCACACAAGCTCCAAGGAGGCTCGCTTATCTCCACCGGCCAGCCTGGCTCTGCACCACTCGTCTGCCCACTGGGGCCTGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20092704 297 - 122678785 ATCCTCAGTACTCACCAAGACACAGAAGGGCAGGCAGGGATGGGGCCATGGTTCTTCAGCCC-ATCCAAAGCTCTGTAACCCAGG-AGGGAAGCTGCAGGGGCTG-GAGCAGAGACATCGGATGTGATGAGGATGCAGAGCCCTCTCCTCCCTTCCTGGATCTG-CCTGGCTTTTCCTAAGTGAGGATCATCAAGCTGGAGCCATGCCCTCAGTAGAGTGACTTGCACACAAGTTCACAGAAGCT-CATTTATCTTCTGTCACCAGCCTAGAGCCACACCAT--GTCTGCATCTTCAGGCATGG i canFam3.chr1 I 349 I 34018 a score=252942.000000 s hg38.chr19_GL949748v2_alt 1018476 85 + 1064304 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatcaaaaccacagtgagatatgacttcacacctt s panTro4.chr19 59950601 85 + 63644993 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatgaaaaccacagtgagatatgacttcacacctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894370 85 + 60714840 TCTGTGTTCCCGTGCTCCCATAAACtccctaat-gtcactaggaaaatacgcatcaaaaccacagtgagatatgacctcacacctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103374204 85 - 106955855 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatcaaaaccacagtgagatatgacttcacacctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677013 85 + 64156825 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcgctaggaaaatactcatcaaaaccacagtgagatacgacttcacaactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818968 85 + 59248254 CCTGTGTTCCCGTGCTCCCATAAACtccctgat-gtcgctaggaaaatactcatcaaaaccacagtgagatatgacttcacaactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926696 85 + 51301725 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-GTCGCTAGGAAAATActcatcaaaaccacagtgagatatgaCTTCACAACTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629909 85 + 50890351 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcgctaggaaaatactcatcaaaaccacagtgagatacgacttcacagctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 47160 86 + 138250 GCTGTCCTCCCATGTTCCCATAAAGTCTCTGAtggtcgctaggaaaatgtacatcagaaccacagtgagatacgatttcacacttt i calJac3.chr22_GL285922_random C 0 I 1752 e canFam3.chr1 20093001 34018 - 122678785 I a score=395549.000000 s hg38.chr19_GL949748v2_alt 1018561 185 + 1064304 ctggaatggctgt-at-ttttttttttt-cttttgagacaaagtctcgttctttttgcccaggttggagtgcagtggcgccatctcggcccactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---t---accacaccaggctaatttttgt s panTro4.chr19 59950686 186 + 63644993 ctggaatggctgt-at-ttttttttttttcttttgagacaaagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---t---accacaccaggctaatttttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894455 190 + 60714840 ctgggatggctgtaat-tttttttttttttttttgagacaaagtctcactctttttgcccaggctggagtgcagtggcgccatcttggctcactacaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtggctgggattataggtatg---taccaccacgccgggctaatttttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103374289 187 - 106955855 ctgggatggctgt-aa-ttttttttttttcttttgagac--agtctcgctctttttgcccaggctggagtgcagtggtggtatctcagctcactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---taccaccatgccgggctaatttttgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677098 182 + 64156825 ctgggatggctat-aa--------tttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctccggcctcagcctcccgagtggctggggttataggtgtg---caccaccacgctgggctaatttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55819053 189 + 59248254 ctgggatggctat-aa-ttttttttttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctccggcctcagcctcccaagtggctggggttataggtgtg---caccaccacgctgggctaatttttgt i macFas5.chr19 C 0 I 1042 s papAnu2.chr19 47926781 189 + 51301725 CTgggatggctat-aa----tttttttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctgcagcctcagcctcccaaatggctggggttataggtatgtaccaccaccacgccgggctaatttttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629994 179 + 50890351 ctgggatggctat-aatttttttttttttttttccagaaagagtctcgctcttcttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctgcagcctcagcctcccaaatggctggggttataggtgtg---caccaccaca------taact----- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=102285.000000 s hg38.chr19_GL949748v2_alt 1018746 61 + 1064304 atttttagtagagatggggtttcactgtgttggccaggctggtcttgaactcctgacctca s panTro4.chr19 59950872 61 + 63644993 atttttagtagagatggggtttcactgtgttggccaggctggtcttgaactcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894645 61 + 60714840 atttttactaaagatggggtttcactatgttgcccaggctgatcttgaactcctgacctca i ponAbe2.chr19 C 0 I 4561 s nomLeu3.chr10 103374476 61 - 106955855 atttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677280 61 + 64156825 atttttagtatagatggggtttcaccacattggccaggctggtcttgaactccgcacttca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47926970 61 + 51301725 atttttagtagagatggggtttcaccacattggccaggctggtcttgaactccgaacttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47630173 61 + 50890351 atttttagtagagatggagtatcaccacattggccaggctggtcttgaactccgaacttca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e macFas5.chr19 55819242 1042 + 59248254 I a score=571041.000000 s hg38.chr19_GL949748v2_alt 1018807 464 + 1064304 gttgatccacctgcctcggtctcccaaagtgctgggattacaggcatgagccactgcacccgaccggctataa--ttttttttaatggaaaacagcagatattggtgagtatgcagagaaattgaactgcgcgtgcattgctggcagggacgtaacatggcgcccctgctgtggaaaacagttccagcagctcctccagaagttaaacgtgggattgccataaaatccagcaattccacttcggggtacacacctaaaagaactgaaaacagggtctctaac--atatttgtaca-cagtgttcatagcagctttattcacaatagccaaaaggtgaaaccacccacatgtccatcaacaacaatggataaacaacatgtggtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacgcctgtaatcccagca s panTro4.chr19 59950933 464 + 63644993 gttgatccacctgccttggtctcccaaagtgctgggattacaggcatgagccactgcacccgaccggctataa--ttttttttaatgtaaaatagcagatattggtgagtatgcagagaaattggactgcgcgtgcattgctggcagggacgtaacatggcgcccctgctgtggaaaacagttccagcagctcctccagaagttaaacgtgggattgccataaaatccagcaattccacttcggggtacacacctaaaagaactgaaaacagggtctctaac--atatttgtaca-cagtgttcatagcagctttattcacaatagccaaaaggtgaaaccacccacatgtccatcaacaacaatggataaacaacatgtggtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacgcctgtaatcccagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103374537 464 - 106955855 gttgatccgcctgcctcggcctcccacagtgctgggattataggcataagccaccgcacccgaccggctgtaa--ttttttttaatggaaaatagcaaatattggtgagtatgcagagaaattggaccgcgcgtgcattgctggcagggacgtaacatggtgcccctgctgtggaaaacagttttagcagctcctccaaaaggcaaacatggaattgccataaaatccagcaattccacttctgggtatacacctaaaagaattgaaaacagggtctctaacagatatttgtacaccagcgttcataacagctttattcacaatagccaaaaggtgaaaccaaccaaatgtccat---caacaatggataaacaacatgcagtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacacctgtaatcccagca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677341 465 + 64156825 ggtgatccgcccacattggcctcccagagggctggtattacaggcatgagccactgcgcccgaccagctataa--ttttttttaatggaaaacagcaaacgttggtgagtatgcagagaagttggactgcgcgtgccttgctggtggggacataacatggtgccactgctgtggaaaacagttttagcagctcctccaaaagttaaacgtgggattgccgtaaaatccagcaattccacttctgcgtatacacctaaaagaatcgaaaacaggatctcgaac--atatttgtacaccagtgttcctagcagctttattcacaatagccaagaggtgaaaccagccaaatattcatcaacaacaatggataaacaacgtgcggtatatacagacaaggtaacatcaaccaaccttcattaaaagaataaaaatcAgccgggcgcggtggctcacgcctgtaatcccagca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47927031 466 + 51301725 ggtgatctgcccacatcagcctcccaaaaggctgggattacaggcatgagccactgcgcccgaccagctataa-tttttttttaatggaaaatagcAAACGTTGGTGAGTATGCAGAGAAGTTGGACTGCGCGTGCCTTGCTGGCGGGGACATAACATGGTGccactgctgtggaaaacagttttagcagCTCCTCCAAAAGTTAAACGTGGGATTGCCGTAaaatctagcaattccacttctgggtatacacctaaaagaattgaaaacaggatctCGAAC--ATATTTGTACAccagtgttcatagcagctttattcacaatagccaagaggtgaaaccagccaaatatccatcaacaacAATGGATAAACAACATGTGGTATATACAGACAAGGTAATATCAACCAGCcttcattaaaagaataaaaatcagccaggcgcggtggctcacgcctgtaatcccagca i papAnu2.chr19 C 0 I 140 s chlSab2.chr6 47630234 466 + 50890351 ggtgatctgcccacatcggcctcccaaagggctgggattacaggcatgagccactgcgcccgaccagctataattttttttttaatggaaaatagcaaacgttggtgagtatgcagagaagttggactgcgcgtgcattgctggcggggacataacatggtgccactgctgtggaaaacagttttagcagctcctccaaaagttaaacgtgggattgccataaaatccagcagttccacttctgggtatacacctaaaagaattgaaaacaggatctcgaac--atatttgtacaccagtgttcatagcagctttattcacaatagccaagaggtgaaaccagccaaata-ccatcaacaacaatggataaacaacatgcggtacatacagacaaggtaatatcaaccagccttcattaaaagaataaaaATCAgccgggcgcggtggctcacgcctgtaatcccagca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56894706 4561 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e macFas5.chr19 55819242 1042 + 59248254 I a score=72901.000000 s hg38.chr19_GL949748v2_alt 1019271 83 + 1064304 ctttgggaggccgaggcgggcggatcacctgaggtcaggagtccgagaccagcctggttaacatggtgaaaccccatctctac s panTro4.chr19 59951397 83 + 63644993 ctttgggaggccgaggcgggtggatcacctgaggtcaggagtccgagaccagcctggttaacatggtgaaaccccatctctac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103375001 83 - 106955855 ctatgggaggccgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctggttaacatggtgaaaccccgtctctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677806 83 + 64156825 ctttgggaggctgaggcgggtggatcacttgagatcaggagttcgagaccagcctggttaacatggtgaaaccccatctctac i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47630700 83 + 50890351 ctttgggaggctgaggcgggtggatcacttcaggtcaggagtttgagaccagcctggttaacatggtgaaaccccatctctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56894706 4561 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I a score=114397.000000 s hg38.chr19_GL949748v2_alt 1019354 90 + 1064304 taaaaatacaaaaa-ttagctgggcgttaaattagccgggcatggtggcaggtgcctgtaatcccagctacttgggagacggaggcatgag s panTro4.chr19 59951480 90 + 63644993 taaaaatacaaaaa-ttagctgggcgttaaattagctgggtatggtggcgcacacctgtaatcccagctacttgggagacggaggcatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899267 91 + 60714840 TAAAAATACAAAAATTTAGCTGGGCGTTaaattagccaggcatggtggcgcacacctgtaatcccagctacttgggagacggaggcatgag i ponAbe2.chr19 I 4561 C 0 s nomLeu3.chr10 103375084 90 - 106955855 taaaaatacaaaaa-ttagctgggcgttaagttagctgggcatggtggcgcgcgcctgtaatcccagctacttgggagacagaggcatgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677889 90 + 64156825 taaaaatacaaaag-ctagctgggtgttaaattagccgggcatggtggcacacacctgtaatcccagctacttgggagatggaggcatgag i rheMac3.chr19 C 0 I 2 s chlSab2.chr6 47630783 90 + 50890351 taaaaatacaaaaa-ttagctgggcattaaattagccgggcatggtggcacacgcctgtaatcccagctacttgggagatggaggcatgag i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I a score=114386.000000 s hg38.chr19_GL949748v2_alt 1019444 211 + 1064304 aatcgcttgaacctgggaggcagagattgcggtaagccgagatcgcaccactgcactccagcctgggcggcagagtgagactgtctcaaaaataaaaataaggccgggcgtggtggcccatgcctgtaatcctagtactttaggaggctgaggcaggcagattgcctgagctcagcagttcaagaccagcctgggcaacacagtaaaaccc s panTro4.chr19 59951570 211 + 63644993 aatcgcttgaacctgggaggcggagattgcggtaagccgagatcgcaccactgcactccagcctgggcggcagagtgagactgtctcaaaaataaaaataaggccgggcgtggtggcccatgcctgtaatcctagtactttgggaggctgaggcaggcagattgcctgagctcaggagttcaagaccagcctgggcaacacagtaaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899358 211 + 60714840 aatcgcttgaacctgggaggcggaaatcgcggtaagccgagatcgcaccactgcactccagcctgggcgacagagtgagactgtctcaaaaataaaaataaggccgggcgcggtggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagattgcctgagctcaggagttcaagaccagcctgagcaacacggtaaaaccc i ponAbe2.chr19 C 0 I 10 s nomLeu3.chr10 103375174 211 - 106955855 aatcgcttgaacctgggaggcggagattgcggtaagccgagatcgcaccactgcactccagcctgggcgacagagtgagactctctcaaaaataaaaataaggctgggcgcggtggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagattgcctgagctcaggagttcaagcccagcctaggcaacacggtaaaaccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=-1192.000000 s hg38.chr19_GL949748v2_alt 1019655 4 + 1064304 -----ccaa s panTro4.chr19 59951781 4 + 63644993 -----aaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103375385 8 - 106955855 cgtctcta- i nomLeu3.chr10 C 0 I 2 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56899569 10 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=300726.000000 s hg38.chr19_GL949748v2_alt 1019659 607 + 1064304 aaaatacaaaaaaaaaa---tagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgggacgcggaagttgcggtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagattctgtctccaa---------aaaataaaaaatattataaaagaat-aaattcagatacatgctacaacgtgatggaccttgaagacattatgctaaaggaaatattccggacttgacagataaatactgcattgtgccgcttatctgaggtatcgagaggagtcaaattcatagagacagggattagaatggtggttgccaaggcctgggaaaagtggggagttactatttaatagggagcgcttaggttgaagatgatgacaaagtctgggggatccatagtgg-tgatggttacacaacactgtaaatgtatttatatttaatgccattgactgttttttgttttttggttttttgagacggagtctcactctgtcgccgaggctggagtgcagtggcgcgatcttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcct s panTro4.chr19 59951785 611 + 63644993 aaaatacaaaaaaaaaaaaatagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgggacgcggaagttgcggtgagccgagatcgtgccattgcactccagcctgggtgacagagcgagattctgtctccaa---------aaaataaaaaatattataaaagaat-aaattcagatacatgctacaacgtgatggaccttgaagacattatgctaaaggaaatattccggacttgacagataaatactgcattgtgccgcttatctgaggtatcgagaggagtcaaattcatagagacagggattagaatggtggttgccaaggcctgggaaaagtggggagttactatttaatagggagagcttaggttgaagatgatgagaaagtctggggtatccatagtgggtgatggttacacaacactgtaaatgtatttatatttaatgccattgactgttttttgtttttttgttttttgagacggagtctcgctctgtcgccgaggctggagtgcagtggcgcgatctcggctcaccgcaacctccgcctcccaggttccagcgattctcctgcctcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899579 605 + 60714840 gaaatacaaaaaaaa-----tagccgggcatggtggcaggcacctgtagt-ccagctactccggaggctgagacaggagaatggcttgaacccgggaggcagaagttgcagtgagccgagatcgtgccattgcactccagcctgggtgacagagcaagattctgtctccaaaaataaaataaaataaaaaatattataaaagaataaaattcagatacatgctacaacgtaatggaccttgaagacattatgctaaaggaaatattccagacttgatggataaatactgcattgttccacttatctgaggtatcgagaggagtcaaattcataaagacagggattagaatggtggtgg-caaggcctgggaaaagtggggagttgctatttaatagggagagcttaggttgaaggtgatgagaaagtctggggtatccacagtgg-tgatggttacacaacactgtaaatgtatttatatttaatgccattgactgtttttt--------gttttttgagacagagtctcactccgtcgccgaggctggagtgcagtggcgcgatcttggctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcat i ponAbe2.chr19 I 10 C 0 s nomLeu3.chr10 103375395 603 - 106955855 gaaatacaaaaaaaa-----tagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgcgaggcggaagttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagctagattctgtctccaa-----aaataaaataaaaaatattataaaagaataaaattcagatacgtgctacaacatgatggaccttgaagacattacgctaaaggaaataatccagatttgacggataaatactgcattgttccacttatttgcggtatcgagaggagtcaaactcatagagacagggattagcatggtggttgccagggtctgggaaaagtggggcgttactatttaatagggggagcttaggttgaagatgatgat-aagtctgaggtatccatagtgg-tgatggttacacagcactgtaaatatatttatatctaatgccattgactgttttttgtt------ttttttgagacggagtctcgctctgtcgccgaggctggagtgcagtggcgtgatcttggctcaccacaacctccgcctcccaggttcaagcgattctcctgtctcagcat i nomLeu3.chr10 I 2 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=1745086.000000 s hg38.chr19_GL949748v2_alt 1020266 766 + 1064304 cctgagtagctgggactacaggtgcgtgccaccatgcctagttgattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatct--cctgaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccagtgccgttgacttgtatgtgcacttacaggtggttaaaatgagaactatcagggtgttgatatct-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TCATTCAGTGACCATGGTTGAATGCCTGCCACCTTTCAAATATTATGTCAGGCACTCAGTATTGGCAGTTTTATCCATTATaaatgctttaagctgcatagaattttaaacgtgttaataaaagtagttataaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggcgtttttgtttgcacttattgaacgagtggtttcatgcttatccctgcagaatactatgagatttgtcataagggttataaaactataaacccggctgggcgtggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggcagatc-acctgaggtcgggagtttgagaccagcctgaccaacatggagaaacgccatctctactaaaaatacaaaattagctgggtgtggtggcgcatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga s panTro4.chr19 59952396 764 + 63644993 cctgagtagctgggactacaggtgcgcgccaccatgcctagttgattttttgtatttttagtacagacggggtttcatcgtgttagccaggatggtctcgatct--gctaaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccagtgccgttgacttgtatgtgcacttacaggtggttaaaatgAGGACTATCAGGGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TCATTCAGTGGCCATGGTTGAATGCCTGCCACCTTTCAGATATTATGTCAGGCACTCAGTATTGGCAGTTTTATCCATTATAAATGCTTTAAGCTGCATAGAATTTTAAACGC--TAATAACAGTGGTTATaaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggcgtttttgtttgcacttattgaacaagtggtttcatgcttatccctgcagaatactatgagatttgtcataagggttataaaactataaacccggctgggcgtggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggcagatc-acctgaggtcgggagtttgagaccagcctgaccaacatggagaaacgccatctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56900184 763 + 60714840 cctgagtagctgggactacaggtgcgtgccaccatggctagttaattttttgtatttttagtagagacaggatttcaccgtgttacccaggattgtcttgatct--cctgaccttgtaatttggcctcccgaagtgctgggaatacaggcgtgagccaccgtgcctggccaatgccattgacttgtatgtgcacttacaagtagttaaaattataaatATCAGAGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TAGTTCAGT-ACCATGGTTGGATGCCTGCCACCTTTCAAATATTATGTCAGGCACTCAGTATCAGCAGTTTTATCAATTAAAAATGCTTTAAGCTGCATAGaattttaaacgt--taataacagtggttataaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggtgtttttgtttgcatgtattgaacaagtggtttcatgcttatccctgcagaataccatgagatttgccataagggttataaaactataaaccTggctgggcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggcaggtggatc-atctgaggttgggagttcgagaccagcctgaccaacatggagaaacgctgtctctactaaaaatacaaaattagttgggcgtggtggcgcatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103375998 761 - 106955855 cctgagtagctgggactacaagtgcgtgccaccatgctgagttgattttttgtatttttagtaaagatggggtttcaccgtgttagccaggatggtctcgatct--cctgaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccaatgccattgacttgtatgtgcacttacaagtggttaaaatgataaat---AGGGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTCCCCTACATCTC----TAATTCAGTGACCATGGCTGAATGCCTGCCACCTTTCAAATGTTATGTCAGGCGCTCAGTATCGGCAGTTTTATCAATTATAAATGCTTCAAGCTGCATAGAACTTTAAACGT--TAATAACAGTGGTTATaaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaatcgttggcatttttgtttgcatttattgcacaagtggtttcatgcttatccctgcagaatactatgagattggtcataagggttagaaaactataaaccTggcttggcgcagtggctcatgcctgtaatcccaacactttgggaggccgaggcaggtggatc-acctgagatcgagagttcgaggccagcctgaccaacagggagaaacgccgtctctactaaaaatacaaaatcagctgggcgtggtggcgcatgcctataattccagatactcaggaggctgaggcaggagaatcgcttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677981 769 + 64156825 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgcattaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccaatgccattgactcgtatgtgcacttccaagtggttaaaatgataaatatcagggtgtttatatctAAAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATGTTAGGTCAGGTACTCAGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGaattttaaac-----aataacagtggttataaatctttaatacaaaagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattgaacaagtggttttgtgcttatccctgcagaatactatgagatttgccacaagggttataaaactataaactcggccgggcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggtggatcaacctgaggttgggagttcgagaccagcctgaccaacatggaaaaatcccatctctaccaaaaatgcaaaattcgccgggcatggtagcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i rheMac3.chr19 I 2 M 160 s macFas5.chr19 55820284 771 + 59248254 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccacattaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccaatgccattgactcgtatgtgcacttccaagtggttaaaatgataaatatcagggtgtttatatctAAAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATATTAGGTCAGGTACTCAGCATCAGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGAATTTAAAACGT--TAGTAACAGTGGCTATaaatctttaatacaaaagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattgaacaaatggttttgtgcttatccctgcagaatactatgagatttgccataagggttataaaactctaaaGTCGAGcgggcacggtggcgtacgcctgtaatcccaacactttgggaggccgaggcaggcggatc-atctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaccaaaaatgcaaaattagccgggcgtggtggtgcgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i macFas5.chr19 I 1042 C 0 s papAnu2.chr19 47927637 770 + 51301725 cctgagtagctgggactacaggctcccgccaccatgcctggctagttttttgtatttttagtagagatggggtttcaccgtgttaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccaatgcCATTGACTCGTATGTGCACTTCCaagtggttaaaatgataaatatcagGGTGTTTATATCT-AAAACCCTCCCTGACATCATCTTCTCTACATCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATATTAGGTCAGGCACTCGGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGAATTTTAAACGT--TAATAATAGTGGTTATAAATCTTCAATACAAAAGCtgactttaaaattattggtaaaataagattagaaatgtcttaagaattgttAGCGTTTCTGTTTGCATTTATTGAACAAGTGGTTTTGTGCTTATCCCTGCAGAATACTATGAGATTTGCCATAAgggttataaaactataaactcagccgggcacagtggctcacgcctgtaatcccaacgctttgggaggctgaggtgggcggatc-acctgaggttgggagttcgagaccagcctgactaacatggagaaatcccatctctaccaaaaatgcaaaattagctgggcatggtggcgcgtgactgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i papAnu2.chr19 I 140 C 0 s chlSab2.chr6 47630875 770 + 50890351 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccAATGCCATTGACTCGTATGTGCACTTCTAAGTGGTTAAAATGATAAATATCAGGGTGTTTATATCT-AAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACTGTGGCTGAACGCCTGCCACCTTTCAAATATTAGGTCGGGCACTCAGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGaattttaaacgt--taataacagtggttataaatctttaacacaaaagctggctttaaacttattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattaaacaagtggttttgtgcttatccctgcagaatactatgagatttgccataagggttataaaactataaactcaAccgggcacagtggcttacgcctgtaatcccaacactttgggaggccgaggcaggcggatc-acctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaccaaaaatgcaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=249334.000000 s hg38.chr19_GL949748v2_alt 1021032 179 + 1064304 acccgggaggcagaagttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagtgaaactccatctaaaat-aaataaaaata------aaaCATTtgttttttgtagagttgggg--tttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatccaccg s panTro4.chr19 59953160 170 + 63644993 acctgggag-----------------ccgagattgcgccactgcactccagcctgggcaacaagagtgaaactccatctaaaat-aaataaaaatagaaataaaaCATTtgttttttgtagagttggggggtttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatccaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56900947 177 + 60714840 acccgggaggcagaagttgcagtgagccaagattgcgccactgcactccagcctgggcaacaagagcgaaactccgtctaaaataaaataaaaata------aaaaaaTTGCtttctgtagagttgggg--tttcactacgttgcccaggctgctctt-gaa---ctcctgggctcaagcaatcctccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103376759 175 - 106955855 acccgggaggcagaggttgcggtgagctgagattgcaccactgcactccagcctgggcaagaagagcgaaactctatcta-----aaaaaaaatta------aaaaaaCtgttttttgtagagttaggg--tttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatctgccg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821055 172 + 59248254 acccaggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccgtctaaaaa-aaaaaaaa---------aaaaaaaaGTGttttgtagaggtggt---tttcactatgttgcccaggctggtctt-gaa---ctcctaggctcaagcaatccactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928407 168 + 51301725 acccgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccatct------aaaaaaaa---------aaaaattgtttttttgtagagttggt---tttcactatgttgcccaggctggtcttggaa---ctcctaggctcaagcaatccgctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631645 172 + 50890351 acctgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccgtcttaaaa-aaaaaaaa---------aaaaaaTGTttttttgtagagttggt---tttcactatgttgcccaggctggtctt-gaa---ctcctaggctcaatcaatccgctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e rheMac3.chr19 60678750 160 + 64156825 M a score=103032.000000 s hg38.chr19_GL949748v2_alt 1021211 42 + 1064304 acctcagcctcccaaagtgctgggattacaagtgtgagccac s panTro4.chr19 59953330 42 + 63644993 acctcagcctcccaaagtgctgggattacaagtatgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901124 42 + 60714840 acctcggcctcccaaagtgctgggaatacaggtgtgagccac i ponAbe2.chr19 C 0 I 16 s nomLeu3.chr10 103376934 42 - 106955855 acctcagcctcccaaagtgctgggattacaagtgtgagccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678910 42 + 64156825 Acctcagcctcccaaagtgctgggattgcaggtgtgagctac i rheMac3.chr19 M 160 C 0 s macFas5.chr19 55821227 42 + 59248254 acctcagcctcccaaagtgctgggattgcaggtgtgagctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928575 42 + 51301725 acctcagcctcccaaagtgctgggactgcaggtgtgagctac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631817 42 + 50890351 acctcagcctcccaaagtgctgggattgcaggtgtgagctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=24788.000000 s hg38.chr19_GL949748v2_alt 1021253 16 + 1064304 tgtgcctggccCTATT s panTro4.chr19 59953372 16 + 63644993 tgtgcctggccCTATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103376976 16 - 106955855 tgtgcctgaccCTACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678952 16 + 64156825 tgtgcctgtccCCACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55821269 16 + 59248254 tgcgcctggccCCACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928617 16 + 51301725 tgcgcctggccccact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631859 16 + 50890351 tgcgcctggccACATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=320686.000000 s hg38.chr19_GL949748v2_alt 1021269 163 + 1064304 GGGTCCTTTT-AAAAGATACAT--AAAAAATCAAATGCAACAGTG------AAGTCAATCACCCGATGGCAGAAATTggggtgctcctggcatgtggtcggtcgaagccaaggacactgctcagcattctgcagtgcacaggacggccccgcccaggcggagaatgatccgg s panTro4.chr19 59953388 164 + 63644993 GGGTCCTTTTTAAAAGATACAT--AAAAAATCAAATGCAACAGTG------AAGTCAGTCACCCGATGGCAGAAATTggggtgctcctggcatctggtcggtcgaagccaaggacactgctcagcattgtgcagtgcacaggacggccccgcccaggcggagaatgatccgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103376992 164 - 106955855 GGGTCCTTTTTAAAAGATACAT--AAAAAATCAAATGCAACAGTG------AACTCAGTCATCCGATGGCAGAAATTggggtgctcctggcatctggtcggttgaagccaaggacactgctcagcattctgcagtgcacaggacggccccgcccaggcagggaatgatccgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678968 171 + 64156825 GCGTCCTTTTTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCACCCGATGGCAGAAATTggggtgcctctggcgtctggtcagttgaagccaaggacactgctcagcattcttcaatgcacaggacagccccaccatggcagagaatgatccgg i rheMac3.chr19 C 0 I 1315 s macFas5.chr19 55821285 171 + 59248254 GGGTCCTTTTTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCCCCTGATGGAAGAAATTggggtgcctctggcgtctggtcagttgaagccaaggacactgctcagcattcttcaatgcagaggacagccccaccacggcagagaatgatccgg i macFas5.chr19 C 0 I 7 s papAnu2.chr19 47928633 171 + 51301725 GGGTCCTTTCTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCCCCCGATGGCAGAAATTGGGGTGCCTCTGGCATCTGGTCAGTTGAAGCCAAGGACACTGCTCAGCATTCttcaatgcacaggacagccccaccGCGGCAGAGAATGATCCGG i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47631875 171 + 50890351 GGGTCCTTTTTAAAACATACATGAAAAGAATCAAACACAACAGTGAAGGT-AAGTCAGTCACCCGATGGCAGAAATTggggtgcctctggcatctggtcagttgaagccaaggacactgctcagcattcttcaatgcacaggacagccccaccacggcagagaatgatccgg i chlSab2.chr6 C 0 I 7 s calJac3.chr22_GL285922_random 48998 148 + 138250 gggt--ttttTTAAAGACACATAAAAAGAATCAAATGTGACAGTTAAGGTCAAGTCGATCACCCAACGCCAGAAATCggggtgctcctgacatctggtgggttgaagcc-agaacaccattcaacattctgaaat-cacaggacggccccGG-------------------- i calJac3.chr22_GL285922_random I 1752 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I a score=47517.000000 s hg38.chr19_GL949748v2_alt 1021432 43 + 1064304 TGACACATATAGGTGGGAAGGATGCACGAATGATGGCGTTTAG s panTro4.chr19 59953552 43 + 63644993 TGACACATGTAGGTAGGAAGGATGCACGAATGATGGCGTTTAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377156 43 - 106955855 TGACACATGTAGGTGGGAAAGATGCACGAATGATGGCATTTAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821463 32 + 59248254 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i macFas5.chr19 I 7 I 306 s papAnu2.chr19 47928811 32 + 51301725 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47632053 32 + 50890351 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i chlSab2.chr6 I 7 C 0 s calJac3.chr22_GL285922_random 49146 43 + 138250 TGCCACGTGTGGGTGGGAAGGATGCACAGATGTTGGTGTTTAG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=6423.000000 s hg38.chr19_GL949748v2_alt 1021475 4 + 1064304 GAAG s panTro4.chr19 59953595 4 + 63644993 GAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377199 4 - 106955855 GAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821801 4 + 59248254 aaag i macFas5.chr19 I 306 C 0 s papAnu2.chr19 47928843 4 + 51301725 AAAG i papAnu2.chr19 C 0 I 295 s chlSab2.chr6 47632085 4 + 50890351 AAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49189 4 + 138250 GAAG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=169104.000000 s hg38.chr19_GL949748v2_alt 1021479 111 + 1064304 AATATTATCACTTCTTTCCCGTAAGAGCAACTTAGAGCAAGAAAATGGTATTATTCTTAGGGCCTTCTCTCTTATGGAGGCTCCAAGCCAGGGTTGCCATGGCAGAAGATG s panTro4.chr19 59953599 107 + 63644993 AATATTATCACTTCTTTCCCGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAGGGCCTTCTCTCTTATG-AGGCTCCAAGCCAGGGTTGCCATGGCAGAAGATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377203 107 - 106955855 AATATTATCACTTCTTTCCCATAAGAACAACTTAGAGCAAGAAAATGGTATT---CTTAGGGCCTTCTCTCCTATG-AGGCTCCAAGCCCGGGTTGCCATGGCAGAAGATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821805 107 + 59248254 aaTATTATCACTTGTTTCCTGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGGCTGCCATCGCAGAAGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47929142 107 + 51301725 aatattatcacTTGTTTCCCATAAGAGCaacttagagaaagaaaatggtatt---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGGTTGCCATCGCAGAAGATG i papAnu2.chr19 I 295 C 0 s chlSab2.chr6 47632089 107 + 50890351 AATATTATCACTTGTTTCCTGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGTTTGCCATCGCAGAAGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49193 102 + 138250 AGTGTCATTACTTCTCTCCCATAAGAGGAACTTAGAGCGAGAAAATGATATT---CTTAGGGC---CTCTCCCGTG-AGGCTCCAATC--GTGTTGCCGTGGCAGAGGCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=1585737.000000 s hg38.chr19_GL949748v2_alt 1021590 775 + 1064304 CTGGGCTTG-CTTTTTCCTTGAGAGAACTGTACTCAAGATGATGTAACTGTCACC--CC-GGGTGCCACTTGGGTGCTTTGGAGAAGCGCT-CAGACGCGACACGCCGTGACGACTCCGCGGCAGGCAGCCGGACCTGTCCTCTGGCGTGCGGTTCACGGGCTGTGTTTATCCCCCTGGTTCCTTCA----CAGCCACCTTGGGAAATACGTTGCCTCTGAATC-ACGCCAGGCAGGCTCTCACTG------TGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACCG-AACAGCCTGACTAGGAAGCCAGAAAGACGCTGCCGGCTTT--AGTTTGTCCTTTGACTTTCCTTGATATGAATGAAGATAGAGCACTTCCACACTGCACAACAGGAAAAGCCCAGAACGCTTCCTGGAGATAGCGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCC---TCACCTCTGACTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaaaGGAAAGCTGGCTTTCTAGTAAAAACCACTTCCTTTGCTCATTTATCAAACTCAAACGCTAGGAGGGCCACCTAA---CATCCTCCGTCCCACGCAATGGGGTGTTTCTGGAGCACTCCGGT-TTATCAGGGACCCTGTCAGTTGCCATCGCACATGTATATGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGATATTGAAAACATGTTACAGCCAGGAGCGG s panTro4.chr19 59953706 775 + 63644993 CTGGGCTTG-CTTTTTCCTTGAGAGAACTGTACTCAAGATGATGTAAATGTCGCC--CC-GGGTGCCACTTGGGTGCTTTGGAGAAGTGCT-CAGACGCGACACGCCGTGATGACTCCGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCATGGGCTGTGTTTATCCCCCTGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTCTCACTG------TGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACCG-AACAGCCTGACTAGGAAGCCAGAAAGACGCTGCCGGCTTT--AGTTTGTCCTTTGACTTTCCTCGATATGAATGAAGATGGGGCACTTCCACACTGCACAACAGGAAAAGCCCAGAACACTTTCTGGAGATAGCGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCC--CTCACCTCTGACTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGGAAAAAAAAAAAAAAAAA--GGAAAGCTGGCTTTCTACTAAAAACCACTTCCTTTGCTCATTTATCAAACTCAAACCCTAGGAGGGCCACATAA---CATCCTCCGTCCCAGGCAATGGGGTGTTTCTGGAGCACTCCGGTGTTATCAGGGACCCTGTCAGTTGCCATCACACATGTATATGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGATGTTGAAAACATGTTACAGCCAGGAGCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901182 788 + 60714840 CTGGACTCG-CTTTTTCCTTGAGAGACTTGTACTCGAGATGATGTAAATGTCTCCAGCC-GGGTGCCACTTGGGTGGTTTGGAGAAGTGCTACAGATGCAACATGCCGTGATGACTCCGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCCCCGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTTTCACTGTGCGACTGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTGCGCTACAGCAGCAGCCTGACTAGAAAGGCAGAAGGACGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTCCTCGATATGAATGAAGATGGGGCACTTCCACACCGCGCAACAGGAAAAGCCCAGAAAACTTTCTGGAGATAGTGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCCCCCTCACCTCTGACTCCC----------CCTCCCTTCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTTTCCCTGTTTGGGGTTTGCTGGCTGGAAAAAAAAAAAAAAA-----GGAAAGCTGGTTTTCTACTAAAAACCACTTCTTTTGTCCATTTATCAAACTCAAACCCTAGGAGGGCTACATAA---CATCCTCCGTCCCAGGCAACGGGGTGTTTCTGGAGCACTCCGGT-GTATCGGGGACCCAGTCAGTTGCCATCGCATATGTATATGGGGCCATCCCCTATACCACCGAAGAGGGGGGGATGTTGAAAACATGTTACAGCCAGGAGCGG i ponAbe2.chr19 I 16 C 0 s nomLeu3.chr10 103377310 780 - 106955855 CTGTGCTCG-CTTTTTCCTTGAGAGAATTGTACTCAAGATGATGTAAATGTCGCC--CC-GGGTGCCACTTGGGTAGTTTGGAGAAGTGCT-CAGACACAACACGCTGTGATGACTCAGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCTCCGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTCTCACTGTGCGACTGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACAGCAGCAGCCTGACTAGGAAGGCAGAAGGACGCTGCCATCTTTAGGGTTTGTCGTTTGACTTTCCTCAATATGAATGACGATGGGGGACTTCCACACTGTGCAACAGGAAAAGCCCAGAAAACTTTCTGGAGATAGCGAGGGGGTGATGCAGCAGACAGCTATGGCTGATGACCCCC--CTTACCTGTGGCTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACTATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGGAAAAAAAAAGAAAA-----GGAAAGCTGGCTTTCTACTAAAAACCACTTCCTTTGCCCATTTATCAAACTCAAACCCTAGGAGGGCCACATAA---CATCCTCCGTCCCAGGAAACGGGGTGTTTCTGGAGCACTCCGGT-GTATCAGGGACCCGGTCAGTTGCCATCGCATATGTATATGGGGCCAGCCCCTGTGCCACCAAAGA-GCGGGGATGTTGAAAACGTGTTACAGTCAGGAGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821912 787 + 59248254 CTGGGCTTGTTTTTTTCCTTGAGAGAATTGTACTCAAGGTGATGTACATGTCGCC--CT-GGGTGCCACTTGGGTGGTTTGGAGAAGTGCT-CGGACGCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCTCTGGTTCCTTCA----CAATCACCTTGGGAGATACGTTGCCTCTGGATC-ACGCCAGGCAGGTTCTCCCTGTGTGACTGTGTGCTGCAGGGCTGGAAATCAGGGTGGCACTCCGCTACAGCGGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTACTCGATATGAATGAAGATGGGGCACTTCCACACTGCACAACAGGAGAAGTCCAGAAAACTTTCTGGAGATAGCGAGAGGGTGATGCAGCGGACAGCTATGACTGATGACTGCC--CTCACCTCTGACTCCC----------GCTTCCTCCCCGCCTTCTGAACGCACATCCATCACCAACCATAGGTT--CTTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaa-GGAAGCCTGGCTTTCTACTAAAAACCACTTCCTTTGCCCATATATCAAACTCAAACCCTCGGTGGGCCACATAACATCATCCTCCATCCCAGGCAACGAGGTGTTTCTGGAGCACTCCGGT-CTATCAGGGACCTGGTCAGTTGCCATCGCATACGTATGTGGGGCCAGCCCCTGTGCCACCGAAGA--GGGGGATGTTGGAAACTTGTTACAGCCGGGAGCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47929249 782 + 51301725 CTGGACTCG-GTTTTTCCTTGAGGGAATTGTACTCAAGGTGATGTACATGTCACC--CT-GGGTGCCCCTTGGGTGGTTTGGAGAAGTGCT-CGGACTCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTCGCGGTTCACGGGCTGTGTTTATCCCTCTGGTACCTTCA----CAATCACCTTGGGAGATACGTTGCCTCTGGATC-ACGCCAGGCAGGTTCTCCCTGTGCGACTGTGTGCTGCAGGGCTGGAAATCAGGGTGGCACTCCGCTACAGCGGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTACTCGATATGAATGAAGATGGGGCACTTCTACACTGCACAAC---AGAAGTCCAGAAAACTTTCTGGAGATAGTGAGAGGGTGATGCAGCGAACAGCTATGACTGATGACTGCC--CTCACCTCTGACTCCC----------GCTTCCTCCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CTTGTTTGGGGTTTgctggctgg---aaaaaaaaaaaaaaaa-ggaagcctggCTTTCTACTAAAAACCacttcctttgcccatttatcaAACTCAAACCCTCGGAGGGCCACATAACATCATCCTCCATCCCAGGCAACGAAGTGTTTCTGGAGTACTCTGGT-CTATCAGGGACCTGGTCAGTTGCCATCGCGTATGTATGTGGGGCCAGCCCCTGTGCCACCGAAGAgggggggATGTTGGAAACTTGTTACAGCCGGGAGCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632196 778 + 50890351 CTGGGCTTGTTTTTTTCCTTGAGAGAATTGTACTCAAGGTGATGTACATGTCACC--CT-GGGTGCCACTTGGGTAGTTTGGAGAAGTGCT-CGGACGCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTTGCGGTTCACGGGCTGT--------CTCTGGTTCCTTCACAATCAATCACCTTGGGAGATACGTTGCCTCTGAATC-ACGCCAGGCAGGTTCTCCCTGTGCGAC--TGTGCTGCAGGGCTGGAAATGAGGGTGGCACTCCGCTACAGCAGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCACCTTTAGAGTTTGTCCTTTGACTTTACTCAATATGAATGAAGATGGGGCAGTTCCACACTGCATAACAGGAAAAATCCAGAAAACTTTCTGGAGAT----AGAGGGTGATGCAGCGGACAGCTATGACTGATGACTGCC--CTCACCTCTGACTGCC----------CCTTCCTCCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaa-GGAAGCCTGGCTTTCCACTAAAAACCACTTCCTTTGCCCATTTATCAAACTCAAACCCTTGGAGGGCCACATAACATCATCCTCCATCCCAGGCAACGAGGTGTTTCTGGAGCACTCCGGT-GTATCAGGGACCTGGTCAGTTGCCATCGCATACGTATGTGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGAGGTTGGAAACTTGTTACAGCTGGGAGCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49295 758 + 138250 CCAGACTTG-TTTTTCCCTTGAGA----TGGTGTCAACATGGTGTCAATGTCGCC--CTGGGGTGCCACTTGGGTGGTTTGGGTATGTGCT-CAG------------------------CAGCCGCCAGCTGGACCCGTCTTGTGCCTTGCAGTTCATGGGCTGTGTTTATGCCCCTGGTTCCTTCA----CGGGCACCTTGGGAGCTTTGTTGCCTCTGAATCAACACCAGGCAGGGTCTCACCATGAGACTGTGTGCTGTGAAGCTGGAAATCAAGGCCACACTCTGCTACAGCAGCAACCTGAGTGGGAAGGCAGGAAGGCGCCGCCGTCTTTAGAGTTTCTCTTTTGACTTTACTCGACGTGAATGAAGACAGAGCACTTTCACACTGCACAGCAGGAG--GTCCAGAAAGCCTCCTGGAGATCGGGAGGGGGTGATGCAGCAGACAGCTGTGGCTCATGACGCCC---TCACCTCTGCCTCCCTCTCCCTCCTTCTCCCTCCCCCATTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGAGTTTACTGGCAGGAAAGAAAAAAA---------GGAAAGCCGGCTTTCTACTAAAAACCACTTCCTTTGACCATTTCTCAAACTC-AACTCTAGGAGGGCCACACATCGCCATCCTCCGTCCCAGGGAACTGGGTGTTTTTGGGGTGCTCAGGT-GTATCAGGGACCCAGTCGGTTGCCACTGAATGTACATATGGGGCCAGCCGCAGTGACGCCAAAGG--GGGGGATATTGAAAACATCTTATAgctgggagcag i calJac3.chr22_GL285922_random C 0 I 1069 e canFam3.chr1 20093001 34018 - 122678785 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=21195.000000 s hg38.chr19_GL949748v2_alt 1022365 11 + 1064304 Tgcccccttgg s panTro4.chr19 59954481 11 + 63644993 Tgcccccttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901970 11 + 60714840 Tgcccccttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378090 11 - 106955855 cgcccccttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55822699 11 + 59248254 Tgcccccttgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930031 10 + 51301725 TGCCccttgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632974 11 + 50890351 Tgcccccttgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51122 11 + 138250 tgccctctggg i calJac3.chr22_GL285922_random I 1069 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=50600.000000 s hg38.chr19_GL949748v2_alt 1022376 18 + 1064304 ttcaagcagttcttctgc s panTro4.chr19 59954492 18 + 63644993 ttcaagcagttcttctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901981 18 + 60714840 ttcaagcagttcttctgc i ponAbe2.chr19 C 0 I 354 s nomLeu3.chr10 103378101 18 - 106955855 ttcaagcagttcttctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680454 18 + 64156825 ttcaagcagttcttctgc i rheMac3.chr19 I 1315 C 0 s macFas5.chr19 55822710 18 + 59248254 ttcaagcagttcttctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930041 18 + 51301725 ttcaagcagttcttctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632985 18 + 50890351 ttcaagcagctcttctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51133 15 + 138250 ttcaagcaattttgc--- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I a score=124271.000000 s hg38.chr19_GL949748v2_alt 1022394 44 + 1064304 ctcagcctccctaatagctgggattaca-ggcgtgcaccatcacg s panTro4.chr19 59954510 44 + 63644993 ctcagcctccctagtagctgggattaca-ggcgtgcaccatcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902353 45 + 60714840 ctcagcctctctagtagctgggattacagggcgtgcaccatcacg i ponAbe2.chr19 I 354 C 0 s nomLeu3.chr10 103378119 44 - 106955855 ctcagcctccctagtagctgggattgca-ggcgtgcaccatcacg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680472 44 + 64156825 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822728 44 + 59248254 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930059 44 + 51301725 ctcagccttcctagtagctgggattaca-ggagtgcaccatcaCG i papAnu2.chr19 C 0 M 503 s chlSab2.chr6 47633003 44 + 50890351 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51148 41 + 138250 ctcagctcacctagtagctggcattaca-ggcatgcaccacg--- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I a score=108854.000000 s hg38.chr19_GL949748v2_alt 1022438 51 + 1064304 cctgg-ccactgttatgtagtttttaCCACAATTTAAAAAA-GGAA--AGAGTGC s panTro4.chr19 59954554 51 + 63644993 cctgg-ccactgttatgtacttttTACCACAATTTAAAAAA-GGAA--AGAGTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902398 53 + 60714840 cctggcccagtgttacatactttttaCCACAATTTAAAAAAGGGAA--AGAGTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378163 51 - 106955855 cctgg-ccagtgttacgtacttttTACCACAATTCAAAAAA-GGAA--AGAGTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680516 51 + 64156825 cctgg-ccagtgttgtgtacttttTATCACAATTTTAAAAA-GGAA--AGAGTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822772 51 + 59248254 cctgg-ccagtgttgtgtacttttTATCACAATTTAAAAAA-GGAA--AGAGTGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47633047 51 + 50890351 cctgg-ccagtgttgtgtacttttTATCACAATTTTAAAAA-GGAA--AGAGTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51189 53 + 138250 cctgg-ccagtgctctatacttttTATCACAATTTAAAAAA-GGAAAGAGAGTGC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e papAnu2.chr19 47930103 503 + 51301725 M a score=162511.000000 s hg38.chr19_GL949748v2_alt 1022489 70 + 1064304 CTGGGTGAGTCCTACGCAC-CTATTCGGAGAACCAAAGGCTTTGAGG---TTATCCTCGGCCCAC----CCATCTGAT s panTro4.chr19 59954605 69 + 63644993 CTGGGTGAGTCCTAC-CAC-CTATTCAGAGAACCAAAGGCTTTGAGG---TTATCCTCGGCCCAC----CCATCTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902451 70 + 60714840 CTGCGTGAGTCCTACACAC-CTATTCAGAGATCCAAAGGCTTTGACG---TTATCCTCGGCCCAC----CCATCTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378214 70 - 106955855 CTGGGTGAGTCCTATGCAC-CTATTCAGAGAACCAAAGGCTTTGAGG---TTATCCTCAGCCCAC----CCATCTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680567 73 + 64156825 CTGGGTAAATCCTATGCAC-CTATTCAGAGAACCAGAGGCTTTGAGGCTTGTATCCTCAGCCCAC----CCATCTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822823 73 + 59248254 CTGGGTGAGTCCTACGCAC-CTATTCAGAGAACCAGAGGCTTTGAGGCTTTTATCCTCAGCCCAC----CCATCTCAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47633098 70 + 50890351 CTGGGTGAGTCCTACGCAC-CTATTCAGAGAACCAGAGGCTCTGAGG---TTATCCTCAGCCCAC----CCATCTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51242 71 + 138250 TTGGGTGAGCCCTACGCACATTATTTAGAGAACCAGAGGTTTTGAGA---TTATCCTCAGGGCCC----CCATCTGAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127019 71 - 122678785 CCAGATGAATCCTAT--AC-ATATTTAGAGAACCAGAGGTTTCGAGG---TTACTCTCAGACTACTGTACTATCAGT- i canFam3.chr1 I 34018 C 0 e papAnu2.chr19 47930103 503 + 51301725 M a score=166234.000000 s hg38.chr19_GL949748v2_alt 1022559 73 + 1064304 GGGAGTGTTTCTCAAACTTGCTTTTCCGTGATCTCCCAGTAAGAAATACC-TACT------ACACACACACAGTCTCCgg s panTro4.chr19 59954674 71 + 63644993 GGGAGTGTTTCTCAAACTTGCTTTTCCGTGATCTCCCAGTAAGAAATACC-TACT------ACACACACA--GTCTCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902521 73 + 60714840 GGGAGTGTTCCTCAAACTTGCTTTTCCATGAACTCCCAGTAAGAAATACC-TACT------ACACACACACTGTCTCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378284 73 - 106955855 GGGAGTGTTTCTCAAACTTGCTTTTCCATGAACTCCCAGTAAGAAATAGC-TACT------ACACACACACTGTCTCCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680640 67 + 64156825 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAATGTCCT------ACACACACACACACTCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822896 65 + 59248254 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAACGTCCT--------ACACACACACACTCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930620 67 + 51301725 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAAcgtcct------acacacacacacactcctg i papAnu2.chr19 M 503 C 0 s chlSab2.chr6 47633168 63 + 50890351 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAACGTCCT----------ACACACTCTCTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51313 79 + 138250 GGGAGTGTTTCTCTAACTTGCTTTTCCATGATCTCCCAGTAAGAAATCCA-TACTACACACACACACACACACTCTCCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127090 64 - 122678785 AGAAGTATTTCTCAAACTAGTTTTTCCCTGATCCCACAGTAAGAA----------------ATGCACACATtgtataagg i canFam3.chr1 C 0 I 82 a score=364969.000000 s hg38.chr19_GL949748v2_alt 1022632 147 + 1064304 tcggcatgcttagggtagtcttccaattcccc-ctcctggtatttacaccctggagtggtccgctcctcttgggctgaacctgtaacttgctcccaagcaagagcacacagcaagct----cacgcacgtggttgttggtgtgattctgttt s panTro4.chr19 59954745 147 + 63644993 TCGGCATGCTTAGGGTAGTCTTCCAattcccc-ctcctggtattcacaccctggagtggtccactcctcttgggctgaacctgtaacttgctcccaagcaagagcacacagcaagct----cacgcacgtggttgttggtgtgattctgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902594 147 + 60714840 TCGGTGTGtttagggtagtcttccgattcccc-ctcctggtattcacaccctggactggtccactcctcttgggctgaacctgtaacttgctcccaagcaagagcacatagcaaact----cacgcacatggttgtcggtgtgattgtttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378357 146 - 106955855 TCGGCGTGCTtagggtggccttccgattcccc-ctcccggtattcccaccctggagtggtccactcctcttgggctgaacctgtaacttactcccaagcaagagcacatagcaagct----cacgcacgtggttg-cggtgtgattctgttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680707 139 + 64156825 TCGGCGTG-----------CTTCCgattcccc-ctcctggta-tcacaccctggaggggtccactccttttgggctgagtctgtaacttgcccccaagcaagagcatacagcaagctcacgcacgcacgtggttgttggtgtgattcagttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822961 135 + 59248254 TCGGCGTG-----------CTTCCGATTCCCC-CTCCTGGTA-TCACACCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGcaagct----cacgcacgtggttgttggtgtgattcagttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930687 139 + 51301725 tcGGCGTG-----------CTTCCGATTCCCC-CTCCTGGTA-TCACGCCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGCAAGCTCACGCACACACGTGGTTGTTGGTGTGATTCAGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633231 135 + 50890351 TCGGTGTG-----------CTTCTGATTCCCC-CTCCTGGTA-TCACACCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGcaagct----cacgcacgtggttgttggtgtgattcagttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51392 146 + 138250 CTGG-GGGCctagggtagtctcctgactccccgctcctggtattcactccctggaa-ggtcccctcctcttcggctgagcctataacttgctccctagcaagagcatacagcaagct----cacacgcatagttgttggtgggattctgttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127154 82 - 122678785 I a score=11632.000000 s hg38.chr19_GL949748v2_alt 1022779 13 + 1064304 ctccagattgtct s panTro4.chr19 59954892 13 + 63644993 ctccagattgtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902741 13 + 60714840 ccctggcttctcc i ponAbe2.chr19 C 0 I 62 s nomLeu3.chr10 103378503 13 - 106955855 ctcccagctgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680846 6 + 64156825 ctcccg------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823096 6 + 59248254 ctcccg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930826 13 + 51301725 CTCCCGGTTGTTG i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47633366 13 + 50890351 ctctcggttgttg i chlSab2.chr6 C 0 I 6 s calJac3.chr22_GL285922_random 51538 13 + 138250 ctcccagttgtta i calJac3.chr22_GL285922_random C 0 I 9 s canFam3.chr1 20127236 13 - 122678785 CTCCTGGCTGCCC i canFam3.chr1 I 82 C 0 a score=66460.000000 s hg38.chr19_GL949748v2_alt 1022792 27 + 1064304 ccattcctccctggcttctccacaggg s panTro4.chr19 59954905 27 + 63644993 ccattcctccctggcttctccacaggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103378516 27 - 106955855 ccattcctccctggcttctctacaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680852 25 + 64156825 --gttcctccctggcttctccacaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823102 25 + 59248254 --gttcctccctggcttctccacaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930845 27 + 51301725 CCGTTCCTCCCTGGCTTCTCCACAGGG i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47633385 27 + 50890351 ccgttcctccctggcttctccacaggg i chlSab2.chr6 I 6 C 0 s calJac3.chr22_GL285922_random 51560 27 + 138250 cagttcctccctggctactccacaggg i calJac3.chr22_GL285922_random I 9 C 0 s canFam3.chr1 20127249 23 - 122678785 ---CAGCTCTCGGGCC-CCCCAGAGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56902754 62 + 60714840 I a score=231827.000000 s hg38.chr19_GL949748v2_alt 1022819 98 + 1064304 ccgctcaccatggcagccggctccatcaccaccagccagcgagagggcaagacaagagggctgac--gagggacgctaccatcacagaggtc----agttttgt s panTro4.chr19 59954932 100 + 63644993 cggctcaccatggcagccggctccatcaccgccagccagcgagagggcaagacgagagggctgacaagagggacgctaccatcacagaggtc----agttttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902816 100 + 60714840 ccgctcgccatggcagccggctccatcaccgccggccagcgagagggcaagacaagagggctgacaagagggacgctaccatcacagaggtc----agttttgt i ponAbe2.chr19 I 62 C 0 s nomLeu3.chr10 103378543 100 - 106955855 ccgctcaccatggcagccgactccatcaccgccagccagtgagagggcaagacaagagggctgacaagagggacgctaccatcacagaggtc----agtttcgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680877 99 + 64156825 ccactcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agagggctggcaggagggatgctaccatcacagaggtc----ggttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823127 98 + 59248254 ccgctcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agagggctggcaggagggatgctaccatc-cagaggtc----ggttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930872 83 + 51301725 CCACTCACCATGACAGCTGGCTCCACCACA----------------GCAAGAC-AGAGGGCTGGCAGGAGGGATGCTACCACCACAGAGGTG----GGTTTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633412 99 + 50890351 ccgctcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agacggctggcaggagggatgctcccatcacagaggtc----ggttttgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51587 101 + 138250 ccgcccaccatggcagctagctctatcacagccagccatccagcaggcaagac-agagggcTGGCAG--GGAGTTATAGCATCACAGAGCTCAGGTGGttttgt i calJac3.chr22_GL285922_random C 0 I 362 s canFam3.chr1 20127272 59 - 122678785 ----------TGGCTCACAGCACTATTGCAAC-----------AAGGCAGTAC-------------------ATGCTAGCAGTACAGATGCCCGGCAgt----- i canFam3.chr1 C 0 C 0 a score=127738.000000 s hg38.chr19_GL949748v2_alt 1022917 57 + 1064304 aacctaaccacaagacta-acctactgtcacttctgccctatcctact-gctagaagcc s panTro4.chr19 59955032 57 + 63644993 aacctaaccacaagacta-acctaccgtcacctctgccctatcctact-gctagaagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902916 57 + 60714840 aacctaaccacaagacta-acctaccgtcacctctgccctatcctact-gctagaagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378643 49 - 106955855 a--------acaagacta-acctaccgtcacctctgccctaccctact-gctagaagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680976 53 + 64156825 aacctaaccacaagacta-acc----gtcacctctgccctatcctact-gctagaaacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823225 57 + 59248254 agcctaaccgcaagacta-accaactgtcacctctgccccatcctact-gctagaaacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930955 57 + 51301725 AGCCTAACCACAAGACTA-ACCAACTATCACCTCTGCCCTATCCTACT-GCTAGAAACC i papAnu2.chr19 C 0 I 310 s chlSab2.chr6 47633511 57 + 50890351 aacctaaccacaagacta-accagctgtcacctctgccctatcctacg-gctagaaact i chlSab2.chr6 C 0 I 294 s canFam3.chr1 20127331 59 - 122678785 aacctaatcccagaatcagacattccgtcagcttcactctgttcttttcactggaagtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=10312.000000 s hg38.chr19_GL949748v2_alt 1022974 4 + 1064304 agtc s panTro4.chr19 59955089 4 + 63644993 agtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902973 4 + 60714840 agtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378692 4 - 106955855 cgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681029 4 + 64156825 agtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823282 4 + 59248254 agtc i macFas5.chr19 C 0 I 305 s papAnu2.chr19 47931322 4 + 51301725 agtc i papAnu2.chr19 I 310 C 0 s chlSab2.chr6 47633862 4 + 50890351 agtc i chlSab2.chr6 I 294 C 0 s canFam3.chr1 20127390 4 - 122678785 agtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=13528.000000 s hg38.chr19_GL949748v2_alt 1022978 5 + 1064304 gctac s panTro4.chr19 59955093 5 + 63644993 gctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902977 5 + 60714840 gctac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378696 5 - 106955855 gctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681033 5 + 64156825 gctaC i rheMac3.chr19 C 0 I 539 s macFas5.chr19 55823591 5 + 59248254 gctac i macFas5.chr19 I 305 C 0 s papAnu2.chr19 47931326 5 + 51301725 gcTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633866 5 + 50890351 gctac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20127394 5 - 122678785 gttgg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=233294.000000 s hg38.chr19_GL949748v2_alt 1022983 118 + 1064304 atctcccccacactc--------------------aaagggaggtggtcgcacCGTGGGGTCCA--CTGGAAGTTGCCTACCAGACTCAGGTCATCCCAAACACACCCTCTAGCCATT------TGGTGTGGCATCGGAAAGAAAA s panTro4.chr19 59955098 118 + 63644993 atctcccccacactc--------------------aaagggaggtggtcgcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGACTCAGGTCATCCCAAACACACCCTCTAGCCATT------TGGTGTGGCATCGGAAAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902982 118 + 60714840 atctcccccacactc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAACACACCCTCCAGCCATT------TAGTATGGCATTGGAAAGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378701 118 - 106955855 atctcccccacactc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAACACACCCTCCAGCCATT------TGGTATGGCATCGGAAAGAAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55823596 117 + 59248254 atct-ccccacagtc--------------------aaagggaggtggtctcacTGTGGGGTCCA--GTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCCGTT------GGGTATGGCATCAGAAAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931331 117 + 51301725 ATCT-CCCCACAGTC--------------------AAAGGGAGGTGGTCTCACTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCCGTT------GGGTATGgcatcaaaaagaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633871 117 + 50890351 atct-ccccacagtc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTAGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCTGTT------GGGTATGGCATCAGAAAGAAAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20127399 144 - 122678785 gtcctgcccacagttggaggtcagaaggcatggagagggggaggtgggatcgt--tgggctccaggctggaaggtgcccaccCGAGTCTGTTCATCCCAAACATATCCTTTGGCTGTTGTGGTCTGATGTGGTAGCAAAAAGAAAA i canFam3.chr1 C 0 I 307 e calJac3.chr22_GL285922_random 51688 362 + 138250 I e rheMac3.chr19 60681038 539 + 64156825 I a score=260824.000000 s hg38.chr19_GL949748v2_alt 1023101 151 + 1064304 CTAAggccaggtacggtggctcatgcctgtaatcccaacaatttgggaggccatggcggaagggtcacttgagcccaggagtttgagaccagcctgggcaacatagcaaatgttatgttgccacctctacaaataattagccaagtgtggt s panTro4.chr19 59955216 144 + 63644993 CTAAggccaggtacggtggctcatgcctgtaatcccaacaatttgggaggccatggcggaagggtcacttgagcccagaagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903100 144 + 60714840 CTAAggccaggtatggtggctcatgcctgtaatcccaacaatttgggaggccatggcagaagggtcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378819 144 - 106955855 CTAAggccaggtatggtggctcacgcctgtaatcctaacaatttgggaggccatggtggaagggtcacttgggcccaggagtttgagaccagcctgggcaacacagcaa-------gaccccacctctacaaataattagccaagtgtggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55823713 144 + 59248254 CGACggccaggtacagtggctcatacctgtaatcccaacaatttgggaggccgtggcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacgaataattagccaagtgtggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931448 144 + 51301725 ctacggccaggtacagtggctcatacctgtaatcccaacaatttgggaggccatggcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633988 143 + 50890351 CTACggccaggtacagtggctcatacctgtaatcccaacactttgggaggccat-gcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 51688 362 + 138250 I e rheMac3.chr19 60681038 539 + 64156825 I a score=914406.000000 s hg38.chr19_GL949748v2_alt 1023252 390 + 1064304 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcac---aggtcgaggttgtagtgagctgtgacggcactgcactccagccttggcaacacagtaagacctcgtctctaaaaaagcaaaaaGggctgggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagataag-cctggccaacatggtgatacc--gtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacatgggagac-acaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagcga s panTro4.chr19 59955360 391 + 63644993 ggcgtgcacctgtagtcccagatactcaggaggctgaggcaggagcatcac---aggtcgaggttgtagtgagctgtgacggcactgcactacagccctggcaacacagtaagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagatcag-cctggccaacatggtgataccctgtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacatgggagac-acaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagcga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903244 393 + 60714840 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcacaggaggtcgaggttgtagtgagctgtgatggcactgcactccagccttggcaacacagtgagaccttgtcgctaaaaa-gcaaaaaGggccaggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccag-cctggccaatatggtgataccc-gtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacctgggagac-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378963 395 - 106955855 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcacaggaggttgaggttgtagtgagctgtgatggcactgcactccagccttggcaacacagtgagaccttgtctctaaaaa-gcaaaaaGggccaggtgcactggctcacacctgtcatcccagcactttgggaggccaagacgggtagatcacctgaggtcaggagttcaagaccag-cctggccaacatggtgataccctgtctttaattagccaggtgtggtggtgggcacctgtaatcccagctactcaggaggctgaggcatgagaatcgcttgaacctgggagacaagaggttgcagtgagccaagatcatgccattgcactccatcctggacaacagagcga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681577 393 + 64156825 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggctcacacctgtaattcctgtactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgcccagtcttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggcggaggcatgagaatcgcttaaacccgggaggc-agaggttgcagcgagccgagatcatgccattgcactccagcctgggcaacagggtga i rheMac3.chr19 I 539 C 0 s macFas5.chr19 55823857 393 + 59248254 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctggctgcactggctcacacctgtaattcctgtactttgggaggccaagatgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgccccgtcttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggctgaggcatgagaatcgcttgaacccgggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagggtga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931592 393 + 51301725 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaagggctgggtgcactggctcacacctgtaattcctgcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgcCCCGTCttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggctgaggcatgagaatcgcttgaacccgggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47634131 382 + 50890351 ggtgtgcacctgtagtcccagctactcaggaggctgagacaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggct--cacctgtaattcctgcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccagacctggccaacatggtgatgccccgtctttaattagccaggtgtggtggtgcacgcctgtcattccagctattcgagaggctgaggcatgag---------aacccaggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=684584.000000 s hg38.chr19_GL949748v2_alt 1023642 254 + 1064304 gactAggtggctgttctgtgtactgtgggatattgagtagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttctatctcgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctgatctcTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTTCCTGTGAAACAGGTGAAAGGGGCTTTCATCTCTAAA s panTro4.chr19 59955751 253 + 63644993 gactAggtggctgttctgtgtactgtgggatattgagtagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttctatctcgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctGATGTCTATCCAGTTTCTAACA--GCAGTCTTGTAAGATGCCCGGACTTAAAACGGTTACTGCCTGTGAAACAGGTGAAAGGGGCTTTCATCTCTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903637 245 + 60714840 gactgggtggctgttctgtgtgctgtaggatattgagcagcatccctggcctccccaGCATCTCAAATATGAA------aacatgttttctatcttgattactgagcttttcggtgcctcctttggttctgcacctaagctaagagccgcttcatctcagcctgatcTTTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTGCCT---------GTGAAAGGGGCTTTCATCTCTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379358 247 - 106955855 gactgggtggctgttctgtgtactgcaggatactgagcagtatccctggcctgcccactaTCTCAAATATGAA------aacatgttttctatcttgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctgatctcTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTGCCTGTGAA-------AAAGGGGCTTTCATCTCTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681970 253 + 64156825 gactgggtggctattctgcgtactgtaggatattgagcagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttcggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCGGACTGAAA-CGGTTATGGCCTGTGAAAGGGGTGAAGGGGGCTTTCATCTCTAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55824250 253 + 59248254 gactgggtggctgttctgcgtactgtaggatattgagcagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttcggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCGGACTGAAA-CGGTTATGGCCTGTGAAAGGGGTGAAGGGGGCTTTCATCTCTAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931985 253 + 51301725 gactgggTGGCTGTTTTGCATACTGTAGGAtattgagcagcatccctggcctccccAGTATCTCaaatatgaa------aacatgttttatatCTCGATTACTGAGCTTTTCAGTGTCTCCTTCGGTTCTGCACCTAAGCTGAGAGCCCCTTCCTCTCACCCTGATCTCTACCCAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCAGACTGAAA-CAGTTATGGCCTGTGAAAGGGGTGAAGGGAGCTTTCATCTCTAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47634513 252 + 50890351 gattgggtggctgttctgtgtactgtaggatatccagcag-atccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttaggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGCAAGATGCCCGGACTTAAA-TGGTTATGGCCTGTGAAAGGGGTGAAGGGGGTTTTCATCTCTAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52050 259 + 138250 GGCTGAGCGGTAGTTCTGTGTATTGTAGGCTACTGAGCAGCTTCCTTGGCCTCCCCAATATCCCAAAGAAAAATACTGGAAAACTCTTTGTATCCCAATGACTGAGCTTTTTAGTGCCTTCTTCAGTTCTGCACCTAAGCCCAGCGCCCCTTCAGCTCACCC-GACCTCCACCCAGTTTCTAACACATCAGTCTTGTAAGAGCCCCAGACTTAAG-TGACTATCGCCTGTGAAAGGGGTAAGAGGAGTTTTCATCTCTAAA i calJac3.chr22_GL285922_random I 362 C 0 e canFam3.chr1 20127543 307 - 122678785 I a score=1911.000000 s hg38.chr19_GL949748v2_alt 1023896 1 + 1064304 A s panTro4.chr19 59956004 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903882 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60682223 1 + 64156825 A i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55824503 1 + 59248254 A i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47932238 1 + 51301725 A i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47634765 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C a score=-1107.000000 s hg38.chr19_GL949748v2_alt 1023897 1 + 1064304 -A s panTro4.chr19 59956005 1 + 63644993 -A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903883 1 + 60714840 -A i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47634766 1 + 50890351 T- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=2739.000000 s hg38.chr19_GL949748v2_alt 1023898 12 + 1064304 GTCGGAACtttt s panTro4.chr19 59956006 12 + 63644993 GTCGGAACtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903884 12 + 60714840 GTCTGAACTTTT i ponAbe2.chr19 C 0 I 13 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=22275.000000 s hg38.chr19_GL949748v2_alt 1023910 249 + 1064304 ttttttttttgagacggaatcttgctctgtcacccaggctggagggcagtggcatgatctcggctcactgcaatctccgcctcccagcttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccatgcccagctaattttttgtatttttttagtagaaacagggtttcattgtgttagccaggatggtctcgatctcctgacctcgtgatccaccgcgcccggcc s panTro4.chr19 59956018 249 + 63644993 ttttttgtttgagacggaatctcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatgcctagctaattttttgtatttttttagtagaaacggggtttcattgtgttagccaggatggtctcgatctcctgacctcgtgatccaccgcgcccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e ponAbe2.chr19 56903896 13 + 60714840 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=1820.000000 s hg38.chr19_GL949748v2_alt 1024159 2 + 1064304 AA s panTro4.chr19 59956267 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903909 2 + 60714840 AA i ponAbe2.chr19 I 13 C 0 s nomLeu3.chr10 103379605 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 52309 2 + 138250 AA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=705182.000000 s hg38.chr19_GL949748v2_alt 1024161 282 + 1064304 GTCTGAACTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAATAAAGCCATGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGCACAGAGG-AAAAATAAAATCTACGACTCGGGTACATTTTCTTCTTTTTTTTTTCTTTTAAATGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGTCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG s panTro4.chr19 59956269 281 + 63644993 GTCTGAACTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAATAAAGCCATGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGCACAGAGG-AAAAATAAAATCTACGACTCGGGTACATTTTCTTCTTTTTTTTT-CTTTTAAATGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGTCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903911 268 + 60714840 GTCTGAACTTTTGCGTGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTGAAAGGAGTAAATCCATGACTTGCCTTTGTTCAGCTCATGGGCATTCACCCATACACAGAGGAAAAAATAAAACCTACGACTCGGGCACATTT---------------TTTTTTAATGAGCAAGTTTGAGAGTCTGCGGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGCCCCAGGCAATCCCGGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379607 274 - 106955855 GTCTGACCTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAGTAAATCCATGGCTTGCCTTTGTTCAGCTCATGGGCATTCACCCATACACAGACG-AAAAACAAAACCTACGACTCGGGAACATTT-------TTTTTTT-TTTTTAAATCAGCAAATTTGAGAGTCTGCGGTTTAGATTACCGTGACAAGTGATAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682225 253 + 64156825 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCA-GGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACATTTTC-----------T-TTTTTTAGTGAGCAAGTTTGAGAG--TGCAGTTTGGACTACCATGAGAATTGACAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55824505 255 + 59248254 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCA-GGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACATTTTC-----------T-TTTTTTAGTGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGACAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47932240 263 + 51301725 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGcacagaggaaaaagtaaaacctACGACTcaagtacattttc----ttttcttt-ttttttagtgagCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCAAG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47634767 279 + 50890351 GTCTGAACTTCTGCATGGCCTGCTGCCCCGGTGATAAACTGAGGTCTTGT-TTCCTAAAAGGAAGAAATCCATGAGTTGCCTTTGTTCAGCTGGTGGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACCttttc---ttttttttt-ttttttAGTGAGCAGGTTTGAGAGTCTGCAGTTTGGACTACTATGAGAATTGATAGGAAGGGGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52311 262 + 138250 GTCTGAACTTCTGCATGGCCTGGTGCCCTGGTGATAACCTGATGTCTTGTGTCCCTAAAAGGAATAAATCCATGAGTTGTCTTTGTTCAGCGCATGGACGTTCCCGCGTACACAGAGGAAAAAATAAAACCTACGACTCTGCTGCATTT-------------T-TTTTTAAATGAGCAAGTTTCAGAGTCTGCAGTTTGGA------TGAGAACTGACAGGAAGGCGGGAGCCCCAGGCACTCCCAGGTCCTT--GCAGCAGCTGGTGGAGTTCCCAGTCCACT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I a score=261570.000000 s hg38.chr19_GL949748v2_alt 1024443 94 + 1064304 CCGTGCAGAGCCTGAACTCAGGATGACACCTGCACCTGCTCTCTGGCTGGGCTCTGGCACAGGAAGCCCTCAGCAAACACCCC-CGGCACAGCCA------- s panTro4.chr19 59956550 87 + 63644993 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCTGGGCTCTGGCACAGGAAGCC-------AACACCCC-TGGCACAGCCA------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904179 94 + 60714840 CCGTGCAGAGCCTGAACTTGGGATGACACCTGCACCTGCTCTCTGGCCAGACTCTGGCACAGGAAGCCCTCAGCAAACACCCC-TGGCAAGGGCT------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379881 94 - 106955855 CCGTGCAGAGCCTGAACTCGGGATGACCCCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCGCAGCAAACACCCC-TAGCAAGGGCT------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682478 94 + 64156825 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCTCAACAAACGCCCC-TGGCAAGGGCT------- i rheMac3.chr19 C 0 I 31 s macFas5.chr19 55824760 94 + 59248254 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCTCAACAAACGCCCC-TGGCAAGGGCT------- i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47932503 94 + 51301725 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTTTCTGGCCTGGCTCTGGCACAGGAAGCCCTCAGCAAACGCCCC-TGGCAAGGGCT------- i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47635046 93 + 50890351 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCC-GGCTCTGGCACAGGAAGCCCTCAGCAAACACCCC-TGGCAAGGGCT------- i chlSab2.chr6 C 0 I 11 s calJac3.chr22_GL285922_random 52573 87 + 138250 CCAGGCAGAGCTTGACCTC-GGATGA------CACGTGCTCTCTGGCCGGGATCTGGCACAGGAAGCCCTCAGCAAGCACCCC-TGGCAAGGGCT------- i calJac3.chr22_GL285922_random C 0 I 11 s canFam3.chr1 20127850 89 - 122678785 CTGTGC-GGGCCTGTCCTCAGGGGTGTTCCGGCAGCT------CGGCCAGGGTATGGCACATGTA------AGTGAACATTCAGCAGCAAGGAACGCACAGC i canFam3.chr1 I 307 C 0 a score=11408.000000 s hg38.chr19_GL949748v2_alt 1024537 18 + 1064304 ------TGCCATAGCCA-----------GACAACA s panTro4.chr19 59956637 18 + 63644993 ------TGCCATAGCCA-----------GACAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904273 18 + 60714840 ------GTGCACAGCCA-----------GACAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379975 29 - 106955855 ------GTGCACAGCCAGACAACAGCCGGACAACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55824865 16 + 59248254 --------CAGTGAACA-----------GACAACA i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47932608 16 + 51301725 --------CAGTGAACA-----------GACAACA i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47635150 16 + 50890351 --------CGGTGAACA-----------GGCAACA i chlSab2.chr6 I 11 C 0 s calJac3.chr22_GL285922_random 52671 14 + 138250 ----------ACGGCCA-----------GACAACA i calJac3.chr22_GL285922_random I 11 C 0 s canFam3.chr1 20127939 24 - 122678785 TGCCACTGATCCAGCCA-----------GGCGACA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60682572 31 + 64156825 I a score=999757.000000 s hg38.chr19_GL949748v2_alt 1024555 355 + 1064304 GCTCG--CTGTACCACaccatcatgggagacagc--agtta-ttctgagcatctcactgctgaagaaaccaaggctc-agagag--gacca-tgcatgcacaaggtcccacagGGACCCAAGAATCC-ACCAAGTGT--CAGACAACTTGCCCATGCTCTTCACGGAGCACCTTGGAACCCTCCCCGACAGGCACCGCTGGCTCTCCTGACGTGGCC-TGCAAGTGCACGGAGCCCCTTCCT-CCTCGGCCATTCCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGACGGAACCAGCCA--GAGCC----CAGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG s panTro4.chr19 59956655 355 + 63644993 GCTCG--ccgcaccacaccatcgcgggagacagc--agtta-ttctgagcatctcactgctgaagaaaccaaggctc-agagag--gacca-tgcatgcacaaggtcccacagGGACCCAAGAATCC-ACCAAGTGT--CAGACAACTTGCCCATGCTCTTCACGGAGCACCTTGGAACCCTCCCCGACAGGCACCGCTGGCTCTCCTGACGTGGCC-TGCAAGTGCACGGAGCTCCTTCCT-CCTCGGCCATTCCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGGCTGAACCAGCCA--GAGCC----CGGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904291 348 + 60714840 GCTCA--CTTCACCATACCATCGCGGGAGACAGC--AGTTA-TTCTGAGCACCTCACTGCT---GAAACCAAGGCTC-AGACAG--GACCA-TGCATACACAAGGTCCCAGAGGGACCCAAGAATCC-----AGTGT--CAGACAACTTGCCCATGCTCTTCACCGAGCACCTTGGCGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGCGCACGGAGCCCCTTCCT-CCTCGGCCGTTCGCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGACGGGACCAGCCA--GAGCC----CGGGGCAGTGCTCACCTGCAGGGCAGTCCACTGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380004 347 - 106955855 GCTCA--CCGCACCGCACCATCACGGGAGACAGC--AGTTA-CTCTGAGCACCCCACCGCT---GAAACCAAGGCTC-AGAGAG--GACCA-CGCATGCACAAGGTCCCAGAGGGACCCAAGAATCC-----AGTGT--CAGACAACTTGCCCGTGCTCTTCACGCAGCACCTTGAAGCCCTCCCCCACCGGCACCACCGGCTCTCCTGACATGGCC-CACAAGCGCATGGAGCCCCTGCTT-CCTCGGCCATTCCCGGTTTACATTCCCAGGGGAAGCATCAGATGGCC--CCTCT-CCCTGCTGGCAGCAGAGCAGATGGGACCAGCCA--GAGCC----CAGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682603 349 + 64156825 GCTCG--CTGCACcacaccatcacgggagacagc--ggtta-ttctgagcacctcaccgctgaagaaaccaaggctc-agagaa--gacccctgcatgcacaaggtcccacgggtacccaagaatcc----gagtgt------cagcttgcccatgctctttgcagagcaccttggagccctccCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTGCATGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCGCTCCCCTGCTGGCAGCAGAGCACATGGGACCAGCCG--GAGCC----CAGGGCAGTGGTCACCCGCGGGCCAGTCCACTGCG i rheMac3.chr19 I 31 C 0 s macFas5.chr19 55824881 353 + 59248254 GCTCA--CCGCACCACACCGTCACGGGAGACAGC--GGtta-ttccgagcacctcaccgctgaagaaaccaaggctc-agagaa--gacccctgcatgcacaaggtcccacgggtaCCCAAGAATCC----GAGTGT--CAGACAGCTTGCCCATGCTCTTTGCGGAGCACCTTGGAGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTGCACGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCGTCAGATGGCC--CCGCTCCCCTGCTGGCAGCAGAGCACATGGGACCAGCCG--GAGCC----CAGGGCAGTGGTCACCCGCGGGCCAGTCCACTGCG i macFas5.chr19 C 0 I 142 s papAnu2.chr19 47932624 345 + 51301725 GCTCG--CCGCACCACACTGTCACGGGAGACAGC--GGTTA-TTCTGAAGA---AACCgttgaagaaaccaaggctc-agagaa--gaccCTTGTATGCACAAGGTCCCACGGGTACCCAAGAACCC----GAGTGT--CAGACAGCTTGCCCATGCTCTTTGCGGAGCACCCTGGAGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTACATGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCGCTCCCGTGCTGGCAGCAGAGCACATGGGATCAGCCT--GAGCC---------CAGTGGTCACCCGCAGGCCAGTCCACTGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635166 354 + 50890351 GCTCG--CCGCACCACACCGTCACGGGAGACAGC--GGTTATTTCTGAGCACCCCACCGCTGAAGAAACCAAGGCTC-AGAGAA--GACCCTTGCATGCACAAGGTCCCACAGGTACCCCAGAATCC----GAGTGT--CAGACAGCCTGCCCATGTTCTTTGCAGAGCACCCTGGAGCCCTCCCCCACAGGCACTGCTGGCTCTCCTGACATGGCC-CACAAGTACACGGAGCCTGTTCCT-TCTCAGCCATTGCCAGTTTAGATTCGCAGGGGAAGCATCAGATGGCC--CCACTCCCCTGCTGGCAGCGGAGCACATGGGACCAGCCA--GAGCC----CAGGGCAGTGGTCACCTGCAGGCCAGTCTACTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52685 356 + 138250 GCGTG--CCACACCACGCCATCACAGGAGGGAGC--AGCTG-TTCTGAGCACCTCACCGCTGGAGAAACCAAGGCTCAAGAGAG--GACCA-TGCGTGTACAACGTCCCACAGGGACCCAGGAATCC-ACCGAGTGT--CAGACACCCTGCCCATGCTCTTCACAGAGCACCTTGGAGCCCACCCCCATGGGCACCGCTGGCTCTCCTGACATCGCC-CACAAGCGCACAGAGACTGTTCCT-CCTCAGCCGTACCCAGTTTAGATTCCCAGAGGAAGTATCAGATGGCC--CTGCTCCCCTGCTGGCAGCAGAGCACACGGGACCAGCCA--GAGCC----CAGGGCAGTGCCCACCTGCAGGCCAGTCCACCGCG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127963 353 - 122678785 Actcattcatcaccatgctgtcctgtgaggtagtcaggtta-ttctgcaca-ttcacagtgggagaaaccgaggctc-agagaggcgactg-agggtgtgcacggtcccacagggaaccatgaacctgactgggtctggcagacaactttccca------------atggccaCACAGGTCTGCACCGTGGCCACCAGTGGCCCTCCTGACACGGCCACAC-------CGGAGCGGCCTCCTCCCTCAGCGATTCCCAGTTC-CACGCTCAAGGCAGGTGTCTGACGGCCAGATGCGCACCTGCCACTGCCTGAGAAGAAAAGGGCAGCTACTGATCCCTACCAGCGTGACGTGGGCATGGCAACCAGCGTTCTTTG i canFam3.chr1 C 0 C 0 a score=17712.000000 s hg38.chr19_GL949748v2_alt 1024910 5 + 1064304 GCCAG s panTro4.chr19 59957010 5 + 63644993 GCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904639 5 + 60714840 GCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380351 5 - 106955855 GCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682952 5 + 64156825 GCCAG i rheMac3.chr19 C 0 I 145 s macFas5.chr19 55825376 5 + 59248254 GCCAG i macFas5.chr19 I 142 C 0 s papAnu2.chr19 47932969 5 + 51301725 GCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635520 5 + 50890351 GCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53041 5 + 138250 ACCAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128316 5 - 122678785 GGCAA i canFam3.chr1 C 0 C 0 a score=108345.000000 s hg38.chr19_GL949748v2_alt 1024915 36 + 1064304 CACCGCCCCCTAGAACCTACTGCGGGCATGGCGGCC s panTro4.chr19 59957015 36 + 63644993 CACCGCCCCCTAGAACCTACTGCGGGCATGGCGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904644 36 + 60714840 CACCGCCCCGTAGAGGACGCTGCTGGCTTGGCGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380356 36 - 106955855 CACCGCCCCCTAGAGGACGCTGCGGGCATGGCGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683102 36 + 64156825 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i rheMac3.chr19 I 145 C 0 s macFas5.chr19 55825381 36 + 59248254 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47932974 36 + 51301725 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i papAnu2.chr19 C 0 I 467 s chlSab2.chr6 47635525 36 + 50890351 CACCGCCCCCTAGAGGAAGCTGCGTGCATGGCGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53046 36 + 138250 CAGTGCCCCCTAGAGGATGCTTCGGTTGTGGCAGCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128321 36 - 122678785 TACTGCCTCCTAGAGGACCCTCTGGGCATGACAGCA i canFam3.chr1 C 0 C 0 a score=3235.000000 s hg38.chr19_GL949748v2_alt 1024951 11 + 1064304 GC------------------------------------------------------------------------CAGTCCTGG s panTro4.chr19 59957051 11 + 63644993 GC------------------------------------------------------------------------CAGTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904680 83 + 60714840 GCCAGTCCTGGGTCTCCCAGCTCAGGTGGTGCCAGCGCCACCCCCTAGAGGAAGCTACGGGCATGGCGGCCAGGCAGTCCTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380392 11 - 106955855 GC------------------------------------------------------------------------CAGTCTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683138 11 + 64156825 ------------------------------------------------------------------------GGCAGTCTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55825417 11 + 59248254 ------------------------------------------------------------------------GGCAGTCTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47933477 11 + 51301725 ------------------------------------------------------------------------GGCAGTCCTGG i papAnu2.chr19 I 467 C 0 s chlSab2.chr6 47635561 11 + 50890351 ------------------------------------------------------------------------GGCAGTCCTGG i chlSab2.chr6 C 0 I 424 s calJac3.chr22_GL285922_random 53082 11 + 138250 ------------------------------------------------------------------------GGCAATCCTGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128357 10 - 122678785 -------------------------------------------------------------------------GTAGTCTTGA i canFam3.chr1 C 0 C 0 a score=26820.000000 s hg38.chr19_GL949748v2_alt 1024962 7 + 1064304 GTCTCCC s panTro4.chr19 59957062 7 + 63644993 GTCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904763 7 + 60714840 GTCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380403 7 - 106955855 GTCTCCC i nomLeu3.chr10 C 0 I 285 s rheMac3.chr19 60683149 7 + 64156825 GTCTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55825428 7 + 59248254 GTCTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47933488 7 + 51301725 GTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635996 7 + 50890351 GTCTCCC i chlSab2.chr6 I 424 C 0 s calJac3.chr22_GL285922_random 53093 7 + 138250 GTCTCCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128367 7 - 122678785 GGCTCGC i canFam3.chr1 C 0 C 0 a score=1299980.000000 s hg38.chr19_GL949748v2_alt 1024969 362 + 1064304 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCGGACAGCTGTCCTCGGTCTGGAGGCGCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATCAGCCCACAGGGCATTTAGTCCACACTCG s panTro4.chr19 59957069 362 + 63644993 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCGGACAGCTGTCCTCGGTCTGGAGGCGCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCTGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGTCCTGCAATCAGCCCACAGGGCATTTAGTCCACACTCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904770 362 + 60714840 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCAGGCATGGCGGACAGCTGTCCTCGGTCTTGCGGCTCCATCCCG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAATACTTTCCCGAAACATCTGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATTAGCCCACAGGGCATTCAGTCCACACTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380695 362 - 106955855 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGAAAGCTGTCCTCAGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGTGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCGGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCCGAAACATCTGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATCAGCGTACAGGGCATTCAGTCCACACTCG i nomLeu3.chr10 I 285 C 0 s rheMac3.chr19 60683156 362 + 64156825 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGTGGCCCTCGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTGCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCAGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGATGATGGGCCCTGCAATCAGCCCACAGGGCGCTCAGTCCACACACG i rheMac3.chr19 C 0 I 43 s macFas5.chr19 55825435 362 + 59248254 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGTGGCCCTCGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTGCCTCACAGA---------GGGAGC---------CTCTAAGCCTACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCACCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGATGATGGGCCCTGCAATCAGCCCACAGGGCGTTCAGTCCACACACG i macFas5.chr19 C 0 I 43 s papAnu2.chr19 47933495 362 + 51301725 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGCGGCCCTCGGTCTTGTGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAAGTTATCTGGGAAGGGGCTGCTCCCTCACCGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCTGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGTTGGGCGGCCAGCTCGGGGCCCTTGACCAACAGCCAGAAGATGGGCCCTGCAATCAGCGCACAGGGCACTCAGTCCACACACG i papAnu2.chr19 C 0 I 220 s chlSab2.chr6 47636003 362 + 50890351 --------------GGCTCTGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGCTGCCCTTGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACGTCCGCCAGTTCCTCTGCCACAGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGAAGCCAGAAGATGGGCCCTGCAATCAGCGCACAGGGCACTCAGTCCACACACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53100 391 + 138250 --------------GGCTCAGGTGGTGCC-----------------------------AACACCGCCCCCTAGAGGATGCTGTGGGTGTGGCGGACAGCGGTGCTCGGTCTCGTGGCTCCATCCTGGAGC-CTGTCTTCATCCTCGCTTTCAAATCTCCTTCC-GAGGTTATCTGGGAAGGGGCTGCTCCCTCACAGAGGACACATGGGACGC---------CTCCAAGCCCACCAGGCGCGCACTTTCAGCCCAAAGCCGCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCTGGGGCCTTCTGTTTGAGTCCATCAAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTACTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGTCCTGCAATCAGCCCACA------------CACACTC- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128374 449 - 122678785 ACAAACTACACTGCCACCTAGAGGGTGACGTGGGCATCTCGGTCAGCGTTCCGTGGGCAACACTGCCACCCAGAGGACGCTGCAGACAGAGCAGCCAGCTTGGGTTGGCCTTGCGGCTCCATCCTGGTACTCCGCCTCCCACGTGGTTTTCACACCTGCTCCCTGAGATTATTTAGGGAGGGGCTGCCCCCTCACTGA---------GGAAACACCTGACATCTCCAAGCCCACCAAGCGGGCACTTTCAGCCCAAAGCCTCTGGGCTACCTCTTCATCCTCAGCTTCCGGGGCTGGAGCCTTCTCTTTGAGTCCATCAAAGTACTTTCCAGAAACACCCTCCAATTCCTCTGCCACGGCCAGGTACGTGCTGGGCTGGGCTGCCAGCTGGGGGCTCTTGACCAACAGCCAGAAGATGGGCCCTGCAATCAGCCCACAGAGCATTCAGTCCACACACG i canFam3.chr1 C 0 C 0 a score=854837.000000 s hg38.chr19_GL949748v2_alt 1025331 301 + 1064304 CTCAGAGAGAAGGAA--GGAAGCCCCGCTCCCCGGTCAG----------------------GGAGCTCCGGGTCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctcccccaaggagccttcctggctttg-tccaggaaaatggaagctctcttcctcttggtcagcccc-agtcctcaccctaccccatttctc------------ctt-taataac---at---cttattaaatgCACCTGGCACCAGCCTCAG s panTro4.chr19 59957431 313 + 63644993 CTCAGAGAGAAGGAA--GGAAGCCCCGCTCCCCGGTCAG----------------------GGAGCTCCGGGTCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctcccccaaggagccttcctggctttg-tccaggaaaatggaagctctcttcctcctggtcagtccc-agtcctcaccctaccCCATTTCTCcttaaataacatctt-aaataac---at---cttaTTAAATGCACCTGGCACCAGCCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905132 282 + 60714840 CTCAGAGAGAAGGGA--GGA-------------------------------------------AGCTCCGGGCCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccttggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctaccccaaggagccttcctggctttg-tccaggaaaatggaagctctcctcctcctggtcagcccc-agtcctcatcctaccCCATTTCTC------------CTT-AAATAAC-TTAA---CTTATTAAATGCACCTGGCACCAGCCTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381057 293 - 106955855 CTCAGAGAGAAGGGA--GGAAGCCCCACTCCCCCATCAG----------------------GGAGCTCCAGGCCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccggac-cagggatcagaccaaaagctgcctcccccaagaagccttcctggctttg-tccaggaaaatggaagctc---tcctcctggtcagcccc-agtcctcaccctaccCCATTTCTC------------CTT-AAATAAC-TTAT---CTTATTAAAT-------GCACCAGCCTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683561 295 + 64156825 CTC--AGAGTAGCGA--GGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGAGccctcctccagccccttcccctt--ggctccctccatctgcagttcccttccctggcactgcccaggctaatccctccagac-cagggatcagaccagaaactgcctcccccaaggagccctcctggctttg-tccaggaaaatggaagctgtcctcctctt----agcccc-agtcctcaccctatcccatttctc------------ctt-aaataac---tt---cttattaaATGCACCTAGCACCAGCCTCAG i rheMac3.chr19 I 43 C 0 s macFas5.chr19 55825840 295 + 59248254 CTC--AGAGTAGCGA--GGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGAGCCCTCCTCCAGCCCCTTCCCCTT--GGCTCCCTCCATCTGCAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCTCCAGAC-CAGGGATCAGACCAGAAACTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCC-AGTCCTCACCCTATCCCATTTCTC------------CTT-AAATAAC---TT---CTTATTAAATGCACCTAGCACCAGCCTCAG i macFas5.chr19 I 43 C 0 s papAnu2.chr19 47934077 292 + 51301725 CTC--AGAGAAGCAA--GGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGagccctcctccagccccttcccCTT--GGCTCCCTCCATCTGCAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCTCCAGAC-CAGGGATCAGACCAGAAGCTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCC-AGTCCTCACCCTACCCCATTTCTC------------CTT-AAATAA---------CTTACTAAATGCACCTAGCACCAGCCTCag i papAnu2.chr19 I 220 C 0 s chlSab2.chr6 47636365 286 + 50890351 CTC--AGAGAAGTGA--GGAAGCCCCACAACCCCGTCAA----------------------GGAGCTCCGGGCCC----------CTAGAGTCCCACAGAGCCCTCCTCCAGCCCCTTCCCTTT--GGCTGCCTCCATCTGTAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCT-------------TCAGACCAGAAGCTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCT-AGTCCTCACCCTACCCCATTTCTC------------CTT-AAATAAC---TTACACTTATTAAATGCACCTAGCACCAGCCTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53491 273 + 138250 -------AGAAGTCA--GGAAGCCCCACTCCCCCATCAG----------------------GGAGCTCCAGGCCC----------CTGGAGTCCCACAGAGCCCTCCTCCAGCCCCTTACCCTT--GGCT---CCCATCTGCAGTTCCCTTCCCTGGTACCGCCCTGGCAAATCCCTCCCGAC-CAGGGGTCACGCCAAAAGCTGCCT-CCCTAAGAAGCCTTCCTGGCTTTG-CCCGGGAAAATGAAAGCTCTCCTCCT--TGGTCAGCCCC-AGTATTCACCCTACCCCATTTCTC-------------------------------CT---TAAATGCACCTGGCACCAGCCTCAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128823 334 - 122678785 TTCAGGGAGGAGGACATGAACACCCTACTCTCCCCCCAACACCCCCACCCCAGGGTTGCCTGGGGCCCAGAGGCCAGAGGTGACACTGCAGTCCCACACAGcccacctccaggcctgtgcctctgaggttccctccaccaggagctcctttccctggcactgcccagccaaatccctccagacatagagaccagcccaaatggggcctcttccagcaagcctccccagcttttccccaggcaaatggaggctc----------agtcatctctgagtccttaccctatcccaccttgc------------tttaaaatagctttta---tttattaaatgtctCTGGGGCCAGGCTCAG i canFam3.chr1 C 0 C 0 a score=26811.000000 s hg38.chr19_GL949748v2_alt 1025632 17 + 1064304 GTTAAGGA-----TCTTTTTTT s panTro4.chr19 59957744 18 + 63644993 GTTAAGGA----TTTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905414 19 + 60714840 GTTAAGGA---TTTTTTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381350 16 - 106955855 GTTAAGGA------TTTTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683856 22 + 64156825 GTTAAGAAtttttttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826135 18 + 59248254 GTTAAGAA----TTTTTTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934369 21 + 51301725 gttaataa-ttttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636651 20 + 50890351 GTTAGGAA-TTTTTTTTTTTT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53764 22 + 138250 GTTAATTTTTGTTTCTTTTTTT i calJac3.chr22_GL285922_random C 0 I 144 e canFam3.chr1 20129157 0 - 122678785 C a score=305729.000000 s hg38.chr19_GL949748v2_alt 1025649 134 + 1064304 ggccaggcgaggtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggattacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaat s panTro4.chr19 59957762 134 + 63644993 ggccaggcgaggtggctcaggcctgtaatcccagcacttcgggaggccgaggtgggcggatcacctagggtcgggagttccagaccagcctggccgacatggtgaaaccccatttctactaaaaatacaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905433 134 + 60714840 ggccaggcgaggtggctcaggcctgtaatctcagcacttcgggaggctgaggcgggcggataacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381366 134 - 106955855 ggccaggcgaggtggctcaggcctgcaattctaccactttgggaggccgaggcgggtggattacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctattaaaaatacaaaaat i nomLeu3.chr10 C 0 M 115 s rheMac3.chr19 60683878 134 + 64156825 ggccaggcgaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccaccctcgccaacatgatgataccccatttctactaaaaatacaaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826153 134 + 59248254 ggccaggcgaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccaccctcgccaacatgatgataccccatttctactaaaaatacaaaact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934390 133 + 51301725 ggccaggcaaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccagcctggtcaacatgatgaaaccccatttctact-aaaatacaaaatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636671 129 + 50890351 -----ggcgaggtggctcaggcctgtaatcccagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccagcctggtcaacatgatgaaaccccatttctactaaaaatacaaaaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=80001.000000 s hg38.chr19_GL949748v2_alt 1025783 50 + 1064304 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg s panTro4.chr19 59957896 50 + 63644993 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905567 50 + 60714840 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60684012 50 + 64156825 tagcc-aggcatggtggtgggtgcctgtaatcccagctgcttgggaggctg i rheMac3.chr19 C 0 I 597 s macFas5.chr19 55826287 49 + 59248254 tagcc-aggcatggtggtgggtgcctgtaatcccagctgcttgggaggct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934523 51 + 51301725 aagcctgggcgtggtggtgggtgcctgtaagcccagctgtttgggaggctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636800 50 + 50890351 tagct-gggcttggtggtgggtgcctgtaatcccagctgcttgggagcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M a score=105409.000000 s hg38.chr19_GL949748v2_alt 1025833 106 + 1064304 gggcaggagaatcccttgaacctgggaggcggaggttgcagtgagctaagatcacaccattgcactccagcctgggtgacaatagcaagacttcgtctcaaaaaaa s panTro4.chr19 59957946 102 + 63644993 gggcaggagaatcccttgaacctgggaggtggaggttgcagtgagctaagatcacaccattgcactccagcctgggtgacaatagcaagacttcgtctc----aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905617 99 + 60714840 gggcaggagaatcccttgaacttgggaggcagaggttgcagtgagctgagatcacactattgcactccagcctgggtgacaatagcaagactttgtctc------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826336 75 + 59248254 -------------------------------aaggttgcagtgagccaaggtcgcaccattgcactccagcctgggtgacaagagcaaaactccatctcaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934574 106 + 51301725 aggcaggagaatcccttgaacccaggaggcggaggttgcagtgagccaaggtcgcaccattgcactccagcctgggtgacaagagcaaaactccatctcaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636850 106 + 50890351 aggcaggagaatcccttgaacccaggaggcggaggttgcagcgagccaagatcgtgccattgcactccagcctgggtgacaagagcaaaattccatctcaaaaaaa i chlSab2.chr6 C 0 I 477 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e rheMac3.chr19 60684062 597 + 64156825 I a score=1018.000000 s hg38.chr19_GL949748v2_alt 1025939 3 + 1064304 aaa s panTro4.chr19 59958048 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905716 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826411 3 + 59248254 ata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934680 3 + 51301725 taa i papAnu2.chr19 C 0 I 400 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 1025942 1 + 1064304 a s panTro4.chr19 59958051 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905719 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826414 1 + 59248254 a i macFas5.chr19 C 0 I 385 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e rheMac3.chr19 60684062 597 + 64156825 I a score=9658.000000 s hg38.chr19_GL949748v2_alt 1025943 38 + 1064304 aaaaaaaGggctgggcgtggtgactcacgcctgtaatc s panTro4.chr19 59958052 38 + 63644993 aaaaGGGGggctgggtgtggtgactcacgcctgtaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905720 38 + 60714840 aaaaaaGGGGCTGGGTGTGATGACTCACGCCTGTAATC i ponAbe2.chr19 C 0 M 596 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=29844.000000 s hg38.chr19_GL949748v2_alt 1025981 348 + 1064304 ccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgtgtgaaaccctgtctcaactaaaaataaaaacttagctgggtgtggtggtgggcgcctgcaatctcagctactttgggaggctgagacaggagaatcacttgaaccgaggaggcagaggttggagtgagccaagattgtgccactgcactccagcctgggtgac--gagcaaaactccgtctc--aaaaaaaaaaagaCAtttatttatttatttattgagacctggtgtcttgctctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaa s panTro4.chr19 59958090 344 + 63644993 ccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgtgtgaaaccctgtctcaactaaaaataaaaacttagctgggtgtggtggtgggcgcctgcaatctcagctactttgggaggctgagacaggagaatcacttgaaccgaggaggcagaggttggagtgagccaagattgtgccactgcactccagcctgggtgacaagagcaaaactccgtctcaaaaaaaaaaaaagacattta-------atttattgaaacctggtgtcttgctctgtca-ccaggctggagtgcagtggcgctatctcggctcactgcaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=1522.000000 s hg38.chr19_GL949748v2_alt 1026329 7 + 1064304 cctctgc s panTro4.chr19 59958434 7 + 63644993 cctctgc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103381619 7 - 106955855 cttttgc i nomLeu3.chr10 M 115 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=7006.000000 s hg38.chr19_GL949748v2_alt 1026336 11 + 1064304 ctcccgggttc s panTro4.chr19 59958441 11 + 63644993 ctccctggttc i panTro4.chr19 C 0 I 472 s nomLeu3.chr10 103381626 11 - 106955855 ctcccgggttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826800 11 + 59248254 ctcccgacctc i macFas5.chr19 I 385 C 0 s papAnu2.chr19 47935083 11 + 51301725 ctcccgacctc i papAnu2.chr19 I 400 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I a score=20659.000000 s hg38.chr19_GL949748v2_alt 1026347 65 + 1064304 aagcgattctcctgcctcagcctcctgagtagctgggactacaggtgcacaccaccacacctggc s nomLeu3.chr10 103381637 65 - 106955855 aagagattctcctatctcagcttcctgcgtagctgggagttcaggtgcacgccaccacgcctggc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826811 65 + 59248254 aggtgatctgcccgccttggcctcccaaagtgctgagattacagatgtgagccatcccgcccagc i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47935094 65 + 51301725 aggtgatctgcccgcctcggcctcccaaagtgctgagattacagatgtgagccatcacgcccagc i papAnu2.chr19 C 0 I 2 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I e panTro4.chr19 59958452 472 + 63644993 I a score=18522.000000 s hg38.chr19_GL949748v2_alt 1026412 25 + 1064304 taatttttgtatttttagtagagac s nomLeu3.chr10 103381702 25 - 106955855 taatttttgtatttttagtagagac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826878 25 + 59248254 taatttttgtatttttaatagagat i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47935161 22 + 51301725 taatttttgta---ttaatagagat i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47637433 25 + 50890351 taatttttgtatttttaatagagat i chlSab2.chr6 I 477 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e rheMac3.chr19 60684062 597 + 64156825 I e panTro4.chr19 59958452 472 + 63644993 I a score=4500.000000 s hg38.chr19_GL949748v2_alt 1026437 3 + 1064304 ggg s panTro4.chr19 59958924 3 + 63644993 ggg i panTro4.chr19 I 472 C 0 s nomLeu3.chr10 103381727 3 - 106955855 ggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826903 3 + 59248254 ggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935183 3 + 51301725 ggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637458 3 + 50890351 ggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e rheMac3.chr19 60684062 597 + 64156825 I a score=104145.000000 s hg38.chr19_GL949748v2_alt 1026440 61 + 1064304 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcccaccaca s panTro4.chr19 59958927 61 + 63644993 gtttcaccatattggtcaggctagtctcaaactcctgacctcaggtgatccaactgcctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103381730 61 - 106955855 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatctgcccaccaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684659 61 + 64156825 gtttccccatggtggccaggctggtctcgaactcctgacctgaggtaatctgcctgccaca i rheMac3.chr19 I 597 C 0 s macFas5.chr19 55826906 61 + 59248254 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcctgccaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935186 61 + 51301725 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcctgccaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637461 61 + 50890351 gtttatccatggtggccaggctggtctcgaacccctgacctgaggtaatccgcctgccaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=109965.000000 s hg38.chr19_GL949748v2_alt 1026501 47 + 1064304 gcctcccaaagtgctgggattacaggcgtgGCTATTAGCCTCGCCAA s panTro4.chr19 59958988 47 + 63644993 gcctcccaaagtgctgggattacaggcgtgGCTATTAGTCTCGCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906354 47 + 60714840 GCCTCCCAAAGTCCTGGTATTACAGGCGTGGCTATTAGCCTCGCCAA i ponAbe2.chr19 M 596 C 0 s nomLeu3.chr10 103381791 47 - 106955855 gcctcccaaagtgcagggattacaggcgtgGCTATTAGCCTCGCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684720 47 + 64156825 gcctcccacagtgctgggattacaggcatggctattagcctggccAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826967 47 + 59248254 gcctcccacagtgctgggattacaggcatgGCTATTAGCCTGGCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935247 47 + 51301725 gcctcccgcagtgctgggattacaggcatggctaTTAGCCTGGCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637522 47 + 50890351 gcctcccgaagcgctgggattacaggcatgGCTATTAGCCTGGCCAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=202761.000000 s hg38.chr19_GL949748v2_alt 1026548 70 + 1064304 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTCATAAAGC s panTro4.chr19 59959035 70 + 63644993 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906401 70 + 60714840 GTTAAGATTCCTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381838 70 - 106955855 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684767 70 + 64156825 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAAACCTAGTTATAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827014 70 + 59248254 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935294 70 + 51301725 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637569 70 + 50890351 GTTAAGATTCTTGATACCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20129157 70 - 122678785 CTTAAAATCCTTGCTATCTGGCAACCACCCAGTAAATGATTTTCAGGATTACAAATACTAGTTCTAAAGT i canFam3.chr1 C 0 I 252 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=593852.000000 s hg38.chr19_GL949748v2_alt 1026618 247 + 1064304 ATGAACTGCctgggggt--ggtggctcacacctgtaatcccagcactttgggaggcag------ttggatcacctgaggtcaggagtttgagactagcctgaccaatatggtgaaaccccacctc------------------tagctgggtgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcagtgagtggagatcatgccattgtactccagcctgggcgacagagcaa s panTro4.chr19 59959105 253 + 63644993 ATGAACTGCCTAggggt--ggtggctcacgcctgtaatcccagcactttgggaggcagaggcagttggatcacctgaggtcaggagtttgagactagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcaatgagtggagatcatgccattgtactccaccctgggcaacagagcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906471 255 + 60714840 TTGAACTGGCTGGgggtgaggtggctcacacctgtaatcccagcactctgggaggccgaggcagttggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcacttgaacctgggaggtggaagttgcagtgagtgcagatcatgccattgtactccagcctgggtgacagagcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381908 253 - 106955855 TTGAACTggctggaggt--ggtggctcgcgcctgtaatcccagcactatgggaggctgaggcagttggatcacttgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcagtgagtggagatcatgccattgtactccagcccgggcgacagagcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684837 271 + 64156825 TTCAACTggctgggggt--ggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggaccacctgaggtcaggagttcaagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggtgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcagtgagtcaagatcgtgcccttgtagtcaagcctgggtgacagagcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827084 271 + 59248254 TTCAACTggctgggggt--ggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcgtggtggtgtgcacctgtaaccccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcaatgagtcaagatcgtgccattgtagtcaagcctgggtgacagagcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935364 271 + 51301725 TTCAactggctgggggt--ggtggctcaggcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtcaggagtttgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcatggtggtgtgcacctgtaaccccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcaatgagtcaaCATCGTGCCATTGTagtcaagcctgggtgacagagcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637639 271 + 50890351 TTGAACTggctgggggt--ggtggctcatacctgtaatctcagcactttgggaggctgaggcaggtggatcaccagaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcgtggtggtgtgtacctgtaatcccagctacttggagacaggagaatcacttgaacctaggagttggaagttgcagtgagtcaagatcgtgccattgtagtcaagcctgggtgacagagcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129227 252 - 122678785 I e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=45888.000000 s hg38.chr19_GL949748v2_alt 1026865 20 + 1064304 gacttcatctcaaaaataaG s panTro4.chr19 59959358 20 + 63644993 gacttcatctcaaaaataaG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906726 20 + 60714840 gacttgatctcaaaaataaG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382161 20 - 106955855 gacttcatctcaaaaataaG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685108 20 + 64156825 gacttcatctcaaaaatata i rheMac3.chr19 C 0 I 4 s macFas5.chr19 55827355 18 + 59248254 gacttcatctcaaaaata-- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47935635 20 + 51301725 gacttcatctcaaaaatata i papAnu2.chr19 C 0 I 341 s chlSab2.chr6 47637910 20 + 50890351 gacttcatctcaaaaataaa i chlSab2.chr6 C 0 I 1 s canFam3.chr1 20129479 20 - 122678785 ttttttatattaaaaaaaaA i canFam3.chr1 I 252 C 0 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=7874.000000 s hg38.chr19_GL949748v2_alt 1026885 5 + 1064304 -TAagt s panTro4.chr19 59959378 5 + 63644993 -TAagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906746 5 + 60714840 -TAagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382181 5 - 106955855 -TAagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685132 5 + 64156825 -taaat i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55827376 5 + 59248254 -taaat i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47935996 5 + 51301725 -taaat i papAnu2.chr19 I 341 C 0 s chlSab2.chr6 47637931 5 + 50890351 -taaat i chlSab2.chr6 I 1 C 0 s canFam3.chr1 20129499 5 - 122678785 AAAAA- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=136968.000000 s hg38.chr19_GL949748v2_alt 1026890 49 + 1064304 aaagctccaactgtttgttccacctattctctgggcggggtcctgtgct s panTro4.chr19 59959383 49 + 63644993 aaagctccaactgtttgttccacctattctctgggcagggtcctgtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906751 49 + 60714840 aaagctccaactgtttattccacctattctctgggtggtgtactgtgct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382186 49 - 106955855 aaagctccaactgtttgttccacctattctctgggcagggtactgtgct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685137 49 + 64156825 aaaGCTccaactgtttattccgcctgttctctgggcagggcactgtgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827381 49 + 59248254 aaaGCTCCAACTGTTTATTCCGCCTGTTCTCTGGGCAGGGCACTGTGCT i macFas5.chr19 C 0 I 471 s papAnu2.chr19 47936001 49 + 51301725 aaagctccaACTGTTCATTCCGCCTGTTCTCTGGGTGGGGCACTGTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637936 49 + 50890351 aaaGCTCCAactgtgtattccgcctgttctctgggcagggcactgtgct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53930 49 + 138250 aaggCTGCAACTGTTTATACAGCCTATTCTCTGGGTGGGTCACGGTGCT i calJac3.chr22_GL285922_random I 144 C 0 s canFam3.chr1 20129504 22 - 122678785 AAAGCT---------------------------Ggtcaggccctgggct i canFam3.chr1 C 0 C 0 a score=2552.000000 s hg38.chr19_GL949748v2_alt 1026939 1 + 1064304 g s panTro4.chr19 59959432 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906800 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382235 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685186 1 + 64156825 a i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47936050 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637985 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53979 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20129526 1 - 122678785 g i canFam3.chr1 C 0 C 0 e macFas5.chr19 55827430 471 + 59248254 I a score=1049056.000000 s hg38.chr19_GL949748v2_alt 1026940 354 + 1064304 gccctttcaaggaaggtctcgtataacccccccagtgactgtgaggtgagtcctattaaggcctgcactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggtgcagctggtttggggtgaagctggagttaccctgagtacagcctgactccaGGCGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCCGCCAGCAGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCAACGGAGGAAAGGGACCTGTGCTCTGTGCCTCAGAAGACGTAGGCGAGGAGCAGGCATGAGGCCTCAGGGACGGTCTCTGAG s panTro4.chr19 59959433 354 + 63644993 gccctttcaaggaaggtctcgtataacccccccagtgactgtgaggtgagtcctattaaggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggtacagctggtttggggtgaagctggagttaccctgagcacagcctgactccaggcgtcagctccacggcctcttcctctgAGACACGGTTTTCTCATCCGCCAGCGGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACGGAGGAAAGGGACCTGTGCTCTGTGCCTTGGAAGACGTAGGCAAGGAGCAGGCATGAGGTCTCAGGGACCGTCTCTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906801 354 + 60714840 gcgctttcaaggaaggtctcgtctaaccatcccactgactgtgaggtgagtcctattaaggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggcgtagctggtttggggtgaagctggagttaccctgagcacagcctgactccaGGAGTCAGCTCCACAGCCTCTTCCTGTGAGACACGGTTTTCTCATCAGCCAGAGGGCCTCT-GCCTACTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAGGGACCTGTGCTCTGTGCCTCAGAAGACACAGGCGAGAAGCAGGCATGAGGCCTCAGGGACCGTCTCTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382236 353 - 106955855 gccctttcaaggacggtctcgtctaaccctcccagtgactgcgaggtaagtcctattaaggcctactctctgcagaggaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggcgcagct-gtttggggtgaagctggagttacgctgagcacagcctgactctaGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCTGCCAGCGGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAAGGACCTGTGCTCTGTGCCTCGGAAGATGCAGGTGAGGAGCAGGCATGAGGCCTCAGGGACTGTCTCTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685187 352 + 64156825 gcccttttaaggaaggtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagcacttccccaggaggcgcggctggtttggggtgaagctggagttaccctgaacacagtctgactccaggagtcagtTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGCTGGTCTCT-GCCTGCTTCCTGAGGCTATTA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGTGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827901 351 + 59248254 GCCCTTTTAAGGAAGGtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgccgatgaagaaac--aggct-------------------cagaggggtaacagcacttccccaggaggcgcggctggtttggggtgaagctggagttaccctgagcacagtctgactccaggagtcagttccacggcctc-tcctctgagacacgctTTTCTCATCGGCCAGCTGGTCTCT-GCCTGCTTCCTGAGGCTGTTA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i macFas5.chr19 I 471 C 0 s papAnu2.chr19 47936051 351 + 51301725 GCCCTTTTAAGGAAGGTCTTGTCTAACCCTCCCAGTGCCTGTGAGGTGAGTCCTGTTATGGCCTCCACtctgcagatgaagaaac--aggct-------------------cagaggggTAACAGCACTT-CCCAGGAGGCGCGGCTGGTTTGGGGTGAAGCTGGAGTTACCCTGAGCACAGCCTGACTCCAGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGTGGGGCTCT-GCCTGCTTCCTGAGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637986 352 + 50890351 gcccttttaaggaaggtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgccgatgaagaaac--aggct-------------------cagaggtgtaacagcacttccccaggaggcgtggctggtttggggtgaagctggagttaccctgagcacagcctgactccaGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGTGGGGCTCT-GCCTGCTTCCTGAGGCTGACA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGAGGCCCCAGGGACCGTCTCTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53980 328 + 138250 GCCCTTTTCAGGAAGGCCTCGT---------------------------------------------Ctctgcagatgaagaaag--aggctggtcggggggggggggggggggggaggttacaccatttccccaggagacacggctggtgtggggtgaagctggagctaacccgagcacagcctgactccaggagtcagttccacggcctcttcctctgAGACATGGTTTTCTCATCAGCCAGCAGCGCTCT-GCCTGCTTCCTGGGGCTGTTG-GAGGGTGGCAGGCCACATCAACACAGGAAAGGGACTCAACCTCTCTGCCTCGTATGATGCAGGGGAGGAGCAGGTATGAGGCCCCAGGGACCGTCTCTGAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20129527 335 - 122678785 gccattttaagg-----cccatctcatcctcccagtaagtgtgaggagggcactaggatggccctc-ctgtgttgttaaggcaactaaggac-------------------ctaagtggtgaggctgcttccccaggtggcacagtttgtttggggtgaaggtggagtcgccccaagcaCAA-------CCAGGAAGCAGCTCCATAATCCCCTCCTCTGGGACTCAA-TTTCTTATCAAACAGCA----TCTAGCCTATTTCCTGGGGCTATTCTGAGGCCACTAGGCTGAAT--ACACATGTA---GACTCATGCTTGGCATCCCAGGAGATACAGGGGAGGGGGCAGAGCGAAGCCGCTCATGTAGTCTCTGAG i canFam3.chr1 C 0 I 519 a score=3600.000000 s hg38.chr19_GL949748v2_alt 1027294 1 + 1064304 G s panTro4.chr19 59959787 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56907155 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382589 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685539 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55828252 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47936402 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47638338 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 54308 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20129862 519 - 122678785 I a score=4031525.000000 s hg38.chr19_GL949748v2_alt 1027295 1253 + 1064304 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCCACGTGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGAAAGAGAAGACTGAGGG-AG------------GGGTCCA-GCCTCACCTGGGAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCACCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGGAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCGGAGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagggcttcataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgcgtggcggtgggacctaagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaaagGCCTAGCACAGATTTCTCAAT-----------------------------------------------------------------------CTCAGCACTGTGGATGCTGTGGGTTGGGAGGAGTGAGGGGCCATCCCGTGCGCTGTAGGACATTGAG-AGCATCTGGGCCTTTACCCTCCAGATGCCCAGAGCAATCTCTCCCCAAGCC-----------AGCTGTGATCACTG-TGTTTCCAGGCATTGACAACTG----CGGGTCA---AAACTGCCCCTGGTTGAGACTCACT-GG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCCTCAGAAGAACGATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGCGGGCAGCGTGGTCCACATGCTCTACTTTTGCTGACTCTGTTCTGGATCCACCGTTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCGAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCGTCAAAGTCTATGTGCCCAGCAACATGGGCCAGGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGATGAAAA s panTro4.chr19 59959788 1357 + 63644993 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCCGCGTGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGA----GAAGACTGAGGGGAG------------GGGTCCA-GCCTCACCTGGGAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCACCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCGGAGCAGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------CCTGGAGGGCTTGATAAACCCAGAACGCTGAGTTCTGATAAACCACAGACAGGTTTTAAACCACCTGTCTGTGGCACTTTGTTACGGAACCCGAGCTGAGTGGTACAGGTAGGAAGGCACCCACCC--GGGAGCCTGCATCGGTGGGTGGCggtgggacctaagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaaagGCCTAGCACAgatttctcaat-----------------------------------------------------------------------ctcagcactatggatgctgtgggttgggaggagtgaggggccatcccgtgtgctgtaggacattgagcagcatctgggcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----cgggtca---aaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCCTCAGAAGAACGATCGATTAGTATCAGTTAGTATCGATTAGTGATGTCTGCTTCAGGCACCAGAAGCGGGCAGCGTGGTCCACATGCTCTACTTTTGCTGACTCTGTTCTGGATCCACCGTTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGTGTCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGATGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56907156 1227 + 60714840 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGACTCAGCATGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCATTGACAGTCACACCAGAACCTGGGGAAGGAAGA----GAAGACTGAGGG-AG------------GGGTCCA-GCCTCACCTGGGAG--------------------GCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCAGGGCAGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagcgcttgataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgggtggcggcaggatctgagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgatttctcgac-----------------------------------------------------------------------ctcagcactatggacgctgtggggtgggaggagtgaggggcagtcctgtgtgctgtaggacattgagcagcatccgggcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----cgggtca---aaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAAACCACCTGGGATGAACAGACAATCATC---AGAACgatcgattagt--------------------gatgtctgctgtaggcaccagaagcaggcagcgtggtccacatgctctacttttgccaactctgTTCTGGATCCACTGCTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCACTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTTCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGACGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382590 1249 - 106955855 GAGGGTCCTGGGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCACAGCATGGAGA-CCCAGGCTGGGAGGGGACTCACCAAGTGTGGAGCTGGAGAAGGTGGAGCCATGGATGCCTGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGAGCATTGACAGTCACACCAGAACCTGGGGAAGAAAGA----GAAGACTGAGGG-AG------------GGGCCCA-GCCTCACCTGGAAGGCTGTGGCGGCCCACACCCAGCTGTGGGGCTTTCCCGGCACCAGGCTGCTTCCTGAACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTC-----------------------------------------AGTGAAGTGGTCTTATCTTGCAGGGTGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgggtggcagtgggatctgacatactgtaactctgaccagctcccagtgcggctggcaccgctggtccacagaccgtctttcagaagcaAGGGCCCAGCACAGACttctcaac-----------------------------------------------------------------------ctcagcactatggacactgtgggctgggaggagtgaggggcagtcctgtgtgctgtaggacgttgaacagcatccgtgcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----caagtca---aaactgcccctggttgagactcactgGG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGATTAGACCACCTGGGATGAACAGACAATCATC---AGAACgatcgattagc--------------------gatgtctgctccaggcaccagaagggggcagcgtggtccacatgctgtactttcgccaACTGTGTTCTGGATCCGCTGTTTGGCCTCCCATCAGCCTGGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTGTACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTAGTCAAGAGAAAGTGACCTGGATTAAGGATGACGTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685540 1289 + 64156825 GAGGGTCCG-GGGCCCCGGGCTGAGAAAGCAAGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCATGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCAGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAATA----GAAGACTGAGGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTTAGTGGTCTTATCTTGCATCGTCCCTCTTGCTCTGAAATCTTAGTGAAGTGGTCTTATCTTGCAGGGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggaatccaaatcggtgggtgatggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagacggtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacactgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggaccttgagcagcatccgggcctttacactccagatgcccagagcaatctctcccccaccc-----------agatgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGCGGGCAGGGTGGTCTGTGTGCTCTACTTTTGCAGATTCTGTTGTGGAGCCACAGCCTGGCCTCCCATCAGCCTAGCATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---TGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCCACGTGGGCCAAGGACGAGAGGTTGATGATCCGTGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55828253 1243 + 59248254 GAGGGTCCG-GGGCCCCGGGCTGAGAAAGCAAGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAATA----GAAGACTGAGGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT----------------------------------------------AGTGGTCTTATCTTGCAGGGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggaattcaaatcagtgggtgagggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacgctgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggaccttgagcagcatccgggcctttacactccagatgcccagagcaatctctcccccaccc-----------agatgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGGGGGCAGGGTGGTCCGTGTGCTCTACTTTTGCGGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCTAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGTG-CCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCCACGTGGGCCAAGGACGAGAGGCTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47936403 1247 + 51301725 GAGGGTCCT-GGGCCCCGGGCTGAGAAAGCAGGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGcctggggaagaaaga----gaagactgagGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCGTCGTTCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCA-GGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------CCTGGAGCACTTGATAAACCCAGAACGCTGAGCT---------------------------------------------------------------------CAC-----------------CCC--AGGAATCCAAATCGGTGGGTGACGGTGGGATCTGAGATACTGTAACTCTGACCAGCTCCCACTGGGGCTGGCACCGCTGGTCCACAGACGGTCTTTCAGAAGCAAAGGCCCAGCACAGATtcctcaac-----------------------------------------------------------------------ctcagcactatggACGCTGTGGATCGGGAGGAGTGAGGGGCCGTCCTGTGTGCTGTAGGACCTGGAGCAGCATCCGGGCCTTTACACTCCAGATGCCCAGAGCAATCTCTCCCCCACCC-----------AGATGTGATCACTG-TGTTTCCAGGCATTGACAACTG----TGGGCCA---GAACTGCCCCTGGTTGAGACTCACT-GG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGGGGGCAGGGTGGTCCGTGTGCTCTACTTTTGCGGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCTAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---TGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTCATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAAAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47638339 1248 + 50890351 GAGGGTCTG-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGAGGGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACACCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGA----GAAGACGGAGGG-AG------------AGGTCCA-GCCTCCCCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCGTCGTGCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCA-GGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctagagcgcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggagtccgaatcagtgggtgagggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacgctgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggacactgagcagcatctgggcctttaccctccagatgcccagagcaatctctcccccaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgggactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAAGAGACAATCATCAGAAGAACAatcgattagt--------------------gatgtctgcttcgggcaccagaagggggcagggtggtccgtgtgctctacttttgcAGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCCAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCG-CCCCGCACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAGGAGAAAGTGACCTGGATTAAGGATGACAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 54309 1251 + 138250 GAGGGTCCT-GGGCCCTG--------------GGGTGGAGGGCTCAGTGCAGAGACCCCAGGCTGGGAGGGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACACCGGGGTGCAGGGCATTGACAGTCACGCCAGAGCCTGGGGAA-AAAGA----GAAGACTGAGGG-AG------------GGGT-----CCTTACCTGGAAGGCTGTGGCAGCCCACACTCAGCTCTGGGGC-------------------TTCCTATAGTCAAACCCCATCGTCGCTCTTGCGCTGAAATCTT-----------------------------------------AGTAAGGTGGTCTTATCTTGCAGAGCAGCTCTGCCACGTGGCGCCTGGGGGcagagattt--------------------------cctggagggcttgatagacccagaacaccaggct---------------------------------------------------------------------ca------------------ccc--aggagtctgaatcagtgggtggggctgggatctga--------------gaccagctcccagtggggttggcactgctggtccacagaccatctttcagaGGCAAGGGCCCAGGGCAGATTTCTCAGCGGACGCTGCGGGCTTTGAGGCACTGCTGGTCCACAGACCATCTTTCAGAGGCAAGGGCCCAGGGCAGATTTCTCAGC-----GGATGCTGCGGGCTTTGAGGGgtgaggggctgtcctgtgtgctgcaggacactgaacagcatgtgggcctttaccctccagatgcccagagcaatctctccccgaccc-----------agctgtggttactg-tgcctccaggta-tgacaattc----caggcca---gaagtgctcctggctgagactcact-gG-CTGGAGC-CAGAAGGCTGGGCTGCCTACCGAAT----GCAGGGAAGGACA-CTGATCCAGGCAGACTAGGCCACCTGGAATGAATGAACAATCATCAGAACAACGATCGATTAGT--------------------TACGTCTGCTTCAGGCACCAGAAGCAGGCAGGGTGGTCCCTATGCTCTGTTTTAGCCCACTCTGTTCTAGAGCCACAGCCTGGCCTCCGCCCAGCCCAGGATCACCGAAGGGCTGCTCTGGGCTCAAAG-TA----AAGAGGGAGGC---CGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGACGGCCAGCTTGCTCTGGCTGTAGGCGGCTTTGGGGTCATACTTCCTCGTCTGCCAGTTCAGGTCATCAAAGTCTATGTGCCCAGCAATGTGGGCCAAGGACGAGAGGTTGATGATCCGGGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGGCCTGGGTTAAAG--GGTGACAA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20130381 1223 - 122678785 GAGAGTCCT-AGGCCCTGAGCTGAGAGGGCAGGGG-------CTCCGCTAAGGGACCCCAGGCCAGGAGGGTTCTTACCGAGTGTGAAACTGGAGAAGGCAGAGCTGTGCATGCCTGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCAGGGTGCAGTGCATTGACAGTCACGCCTGTGCCTAGGGAGAGAAGA---GGAGGGATGAGGG-AGTGGGCAAACGTCAGGTTCACACCCCACCTGGAAAGCTGACGTTGCCCATTCTCAGCTCTAGGGC-TACCCAGTACTGTGCCATGTCCTACCTTTGAACCCACAGCACCCTCTTGCTCTGAAACTTC---------------------------------------CACATTGAGGGGTTTCATCTTGCATTGCAGCTCTGTTGCATGACTGCCCAGAGcagagcctcccaaacctgagcgtatgtaaaaatcacccggagcacttgagacacccaaaccgctaggtt--------------------------ccacc--------------------------------------cac-----------------ccccagggaatctgaagcagtgggtcggggtggggtctgagatgttgcagtggtgacaagctcccagcccagctgacattgcgggtccacggatgctctctgaggagcaggg---CAAAGGGTACCTTTCAAC-----------------------------------------------------------------------TCCAGCTCTGTGCACACTGAGGTC-------------AGATCATTCTTGATCCTG-------CTGAGCAG------------------ctagctgccagtagcaacacccaccccacctccactccctgaagcgaggaccacaactatcttcagatactgccaaatgtccctggggcatccacatcacccatggttgagaatcact-AGCCTAGAGCACCAATGACTTAGATGCCTGTGTGGGATGAGCAGGGAAGGATGCC--------------------------------------------------ACGACTGATGAGT--------------------GATGTCTGCTTCAGGCACC---ACCGAACATGGTGGTATGTGTTTCACACATCCACCTGCTCTGTTCTGGGACTGATGCTTGACCTTCCATCGGTCCAGGGTCATAGCAGGACTGTCCCAGGCTCAGAGCTAGAGGAAGAGGAAGGCCAGCGAGGCTCACACACACATACCCTGCAGCCGCCGGCTCAGCTCCTTGGTAAAGAGGATGACGGCCAGCTTACTCTGGCAATAAGCCGCTTTGGTGTCATACTTCCTCTTCTCCCAGTTCAAGTCATCAAAGTCTATGTGTCCTGCAACGTGGGCCAAGGACGAGAGATTGATGATCCGTGAAGGGGCTGAGGCTTTCAATTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGGTGAAGGACAACAAAAA i canFam3.chr1 I 519 I 831 a score=247827.000000 s hg38.chr19_GL949748v2_alt 1028548 88 + 1064304 GGTCACTTT-------------tgactcacacctaaaatcccagcactttgggaggacgacgggggaggatcgcttgaacccaTGGTGCAGCC-CCTGCCCA s panTro4.chr19 59961145 88 + 63644993 GCTCACTTT-------------tgactcacacctaaaatcccagcactttgggaggatgacgggggaggattgcttgaacccaCGGTGCAGTC-CCTGCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908383 88 + 60714840 GATCACTTT-------------tggctcacacctaaaatcccagcactttgggaggatgacgggggaggatcgcttgaacccaCGGTGCGGCC-CCTGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103383839 88 - 106955855 GGTCACTTT-------------tggctcacgcctaaaatcccagcactttgggaggacgacaggggaggatcgcttgaacccaCGGTGCAGCC-CCTGCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60686829 89 + 64156825 GGTCACTTT-------------tggctcacgtctaaaatcccagcactttgggaggacgacgggggaggatcgcttgagcccaCGGGGCAGCCCCCTGCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829496 89 + 59248254 GGTCACTTT-------------tggctcacgcctaaaattccagcactttgggaggacgacgggggaggatcgcttgagcccacggggcagCCCCCTGCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47937650 89 + 51301725 GGTCACTTT-------------tggctcacgcctaaaatcccagcactttgggaggacgacgggggaggatcgcttgagcccacggGGCAGCCGCCTGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639587 89 + 50890351 GGTCACTTC-------------tggctcacgcctaaaatcccagcactttggggggacgacaggggaggatcgcttgagcccacggggcagCCCCCTGCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55560 95 + 138250 GGTCACTTTTggtcgggcacggtggcttacgcctgtaatcccagcacttcgggag-------ggggaggatggcttgagCCCACGGTGTGGCCCCCTGCCCA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20131604 831 - 122678785 I a score=623176.000000 s hg38.chr19_GL949748v2_alt 1028636 171 + 1064304 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACACCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGAGGAGGAGACATCCCGGTGAGGACAGACCCCAGCCTGATGC s panTro4.chr19 59961233 171 + 63644993 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACACCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGAGGAGGAGACATCCCGGTGAGGACAGACCCCAGCCTGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908471 171 + 60714840 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGATCCAGTGGGGACACCGCATCACACCTGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCTGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103383927 171 - 106955855 GGCCTCACCCAGGTAGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCATCGCATGACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGGGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCCGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60686918 180 + 64156825 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCAGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAAgggggggggggggggggggggggaggAGACATCAGGGAGAGGACAGACCGCAGCCTGAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829585 171 + 59248254 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCAGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GGGAGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCTGAGGC i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47937739 171 + 51301725 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTggaa---------gggaggggtggggaaggagaCATCAGGGAGAGGACAGACCCCAGCCCGAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639676 171 + 50890351 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGGGAAGGAGACGTCAGGGAGAGGACAGACCCCAGCCTGAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55655 169 + 138250 GGACTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCCGTGGTCCAGTGGGGGCACCGCATCACGGCCGCGTTGTTGACTAGAATGTCCACTCGCTCCTCCTCTAGAA-----------GACGGGTGGGGAAGGAGACCTCAGGGTGAGGACAGACCCCGGCCTGAGGC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20132435 164 - 122678785 GGCCTCACCCAAGTGGTTAACACCAAACTGCATCTCAAAGCCGTCCTTGGTGGTCCAGTGGGGGCACCGCATCACGGCCGCGTTGTTGACCAGGATATGAACTTGCTCCTCCTCTAGGA---------GACAGGGGTGAGGGCAGGTATGTCA-------GTCGCATGCCTGCCTGGAGC i canFam3.chr1 I 831 C 0 a score=224514.000000 s hg38.chr19_GL949748v2_alt 1028807 126 + 1064304 ACCAGCA------------------------------------------GAAACACTCCTGTGctcccacaacctgtgaatgtggcctg-tgccggaaacagggtctgtgc-cgaagtggccatgtcaggatgcggtcattagggtgagccctaatccaatgactggtgt s panTro4.chr19 59961404 126 + 63644993 ACCAGCA------------------------------------------GAAACACTCCTGTGctcccacaacccgtgaatgtggcctg-tgccggaaacagggtctgtgc-cgaagtggccatgtcaggatgcggtcattagggtgagccctaatccaatgactggtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908642 126 + 60714840 GCCCGCA------------------------------------------CAAACACTCCTGTGctcccagaacccatgaacgtggcctg-tgccagaaacagggtctgtgc-cgaagtggccacatcaggatgaggtcattagggtgagccctaatccaatgactggtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384098 124 - 106955855 ACCAGCA------------------------------------------GAAACACTCCTGTactcccaga--ccgtgaacgtggcctg-tgccggaaacagggtctgtgc-agaagtggccacgtcaggatgaggtcattagggcgagccctaatccagtgactggtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687098 107 + 64156825 AGCAGTA------------------------------------------GAAACGTTCCTGTGCTCCCAGAACCCGTGAACATGGCCT-------------------GTGC-TGAAGTGGCCACgtcaggaagaggtcattagggtgagccc-aatccagtgactggtgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47937910 125 + 51301725 AGCAGTA------------------------------------------GAAACGTTCCTGTACTCCCAGAACCCGTGAACATGGCCTG-TGCCGGAAACAGGGTCCGTGC-TGAAGTGGCCACGTCAGGAAGAGGTCATTAGGGTGAGCCC-AATccagtgactggtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639847 126 + 50890351 AGCAGTA------------------------------------------GAAACGTTCCTGTGctcccggaacccgtgaacatggcctg-cgccggaaacagggtctgtgc-caaagtggccacgtcaggaagaggtcattagggtgagccctgatccagtgactggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55824 100 + 138250 -ACAGTA------------------------------------------GAAACGTT---------CCGGAGCCCGTGAAGGTGGCCCC-TGCTGGAAACAGG--CTGTGC-AGAAGCGGCCA--------------cattagggtgaggcctaatccaatgactggtgt i calJac3.chr22_GL285922_random C 0 I 286 s canFam3.chr1 20132599 156 - 122678785 ACCAGCGCAATTGGTGTAAAACAACCCCTGCACTGAGCTGAACTGTCCTAAAACATTCAGGCCCAcccagagcctgggaatgcaacctgtttttggaaacag--tccttgcaaaaagtaaagaagttaagataaggtca-cagcgtaggccctaatgca----------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55829756 16 + 59248254 I a score=405565.000000 s hg38.chr19_GL949748v2_alt 1028933 201 + 1064304 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---atgtgtggacagaggcaaagaccggagaggcacagctccaaggtgagggtgggccgcccccgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccgcgat-tcagactgccggcttccggaaccg s panTro4.chr19 59961530 200 + 63644993 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---atgtgtggacggaggcaaagaccggagaggcacagctccaaggtgagggtggg-cgcccctgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccgtgat-tcagactgccggcttccggaaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908768 199 + 60714840 ccttatatgaaggg-aaacagagacagagacacatggggaga---aggcc---atgcgtggatggaggcagagaccagagaggcacagctccaaggtgagggtgcg-cacccccgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccatgat-tcagactgccggcttccggaaccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384222 200 - 106955855 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---acgtgtgaacggaggcggagaccggagaggcgcagctccaaggtgagggtggg-cacccccactggaag-tggaagaggctgggaggattacggcccgtctcacagg-tcacagccacagggacaccgtgat-tgagactgccggcttccggaaccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687205 201 + 64156825 ccttataggaagggaaaacagagacagagacacacggggaga---aggcc---acatgtggacggaagcggagaccggagaggcgcagctccgagatgagtgtggg-cgcccccgctggaag-tggaagaggctgggaggattaccgcccgtctcacaggatcacagccacagggacaccgtgat-tcggactgccggcttccggacccg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47938035 201 + 51301725 ccttataggaagggaaaacagagacagagacacacagggaga---aggcc---acATGTGGACGGAAGCGGAGACCGGAGAGGCGCAGCTCCAAGATGAGTGTGGG-CGCCCCCGCTGGAAG-TGAAAGAGGCTGGGAGGATTACCGCCCGTCTCACAGGATCACAGCCACAGGGACACCGTGAT-TCAGGCTGCCGGTTTCCGGACCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639973 201 + 50890351 ccttataggaagggaaaacagagacagagacacacggggaga---aggcc---acgtgtggacggaagcggagaccggagaggcgcagctccgagatgagtgtggg-cgcccccgctggaag-tggaaaaggctgggaggattaccgcccgtctcacaggatcacagccacagggacgccgtgat-tcggattgccggcttccggacccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 56210 150 + 138250 CCTTACAGGAAGGGAAAACAG----------------------------------------ACGGAGACACGGACAAGAGAG-----------------GTGTGGG-CGACTGCACTGGAAG-TGGAGGAGGCTGGGAGGAttacagcccggctcacaggaacacagccccagagacacccagat-tccaactgctggcttccagaacgg i calJac3.chr22_GL285922_random I 286 C 0 s canFam3.chr1 20132755 163 - 122678785 ------------gcaggacagggactgaggaccatggggaaacagaggccatgatgtatcgat-gagccaaggatcactgaggaccaac------------------agccactgccagaagctgaaagaagcagaaaggatctc-----------ctgg-tcccttcct----gagactgtgatctcagacttctggcctccaaaactg i canFam3.chr1 C 0 I 2038 e macFas5.chr19 55829756 16 + 59248254 I a score=1119423.000000 s hg38.chr19_GL949748v2_alt 1029134 570 + 1064304 tgagggaatgcacgtctgagggtgt-aagccactgggtttgcagtacattgttacagcagctccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCCTTCCTGCCGGAGCCCCGAGGCCAAAAACGGGAGGTTACCGGTGGGAGCCCCGGCAC--------CGCAGGC---G-TGGTTTCATTCCCAAACCTGCCACCTCACTCATACAAGCAACCAAAGGACACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtaccactcagctcgggttccgtaacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcgtggtggcatgcacctgtaatcccagctactcaggaggctgaggcgggaaaatcgcttgaaaccaggag s panTro4.chr19 59961730 570 + 63644993 tgagggaatgcacgtctgagagtgt-aagccactgggtttgcagtacgttgttacagcggccccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCCTTCCTGCCGGAGCCCCGAGGCCAAAAACAGGGGGTTACCGGTGGGAGCCCCGGCAC--------CGCAGGC---G-TGGTTTCATTCCCAAACCTGCCACCTCACTCACACAAGCAACCAAAGGACACAC-AGATGGAGACTGCAgcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtaccactcagctcgggttccgtaacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcgtggtggcatgcacctgtaatcccagctactcaggaggctgaggcaggaaaatcgcttgaaaccaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908967 573 + 60714840 tgaggaaaggcatgtctgagggtgt-aagccactgggtttgcagtacattgttacagcagccccaggacactcacgcaCCCTCCGCACCTCCATCTAAGCCTTGGGACTCTTTCCTACAGGAGCCCCGAGGCCAAAAATGGGGGGTTACCGGTGGGAGCCCCGGCACCACAGGCTCGCAGGT---G-TGGTTTCATTCCCAAACCTGCCATCTCAC----ACAAGCAACCAAAGGACACAC-AGATGGCGACTGCagcctcagttgcctcagctgtaaaatgtgctgaaccacagggccttcttcCCtgtaccactcagctcgggttccataacaa------agtgccacagacaggcggtttaaaacctcacagacctcgccgggcacggtggctcacgcctgtaatcccagcacattgagaggccgaggtgggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaactgcgtctttactaaaaatacaaaattagccaggcgtggtggcgtgcacctgtaattccagctactcaggaggctgaggcgggagaatcgctt-aaaccaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384422 571 - 106955855 tgagggaatgcatgtctgagggtgt-aagccactgggtttgcggtacattgttacagcagccccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCGAGGCCAAAAACGGGGGGTTACCTGTGGGAGCCCCGGCACCGCAGGCTCGCAGGT---G-TGGTTTCATTCCCAAACCTGCCACCTCAC----ACAAGCAACCAAAGGACACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcactgaaccacagggccttcctcCCtgtaccactcggctcaggttccataacaa------agtgccacagacaggtggtttaaaacctcacggacctggcccggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacct---gtcaggagttcaagacaagcctggcaaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcatggtggcgtgcacctgtaattccagctactcaggaggccgaggcgggagaatagcttgaaaccaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687406 571 + 64156825 tgagggaatgcatgtctgagggtgtaaagccactgggtttgaggtacctcgttacagcaggtccaggacactcacac--------CCCCTCCACCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCAAGGCCAAAC----GGGGTTACCGGTGCGAGCCCTGGCACTGCAGGTTTGCAGGTGCGG-CGGTTTCATTCCGAAGCCTGCCACCTCACTCGCACAGACAACCAGAGGGCACACAAGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtatcgctcggctcaggttccataacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcgtggtggctcacgtctgtaatcccagcactttgggagaccgaggtgagcggatcacctgaggtcaggagtttgagactagcctgacccacatgaagaaatggcgtctctactaaaaatacaaaattagccaggcgtggtggtgggcacctgtaatgccagctactcaggaggctgaggcaagagaatcgcttgaaaccgggag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47938236 567 + 51301725 TGAGGGAATGCATGTCTGAGGGTGTAAAGCCACTGGGTTTGAGGTACCTCGTTACAGCAGGCCCAGGACACTCACAC--------CCTCTCCTTCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCTGAGGCCAAAC----AGGGTTACCGGTGCGAGCACTGGCACCGCAGGTTTGCAGGT---G-CGGTTTCATTCCGAAGCCTGCCACCTCACTCACACAGACAACCAAAGGGCACAC-AGATGGAGactgcagcctcagtttcctcagctgtaaaatgcgCTGAACCATAGGGCCTTCCTCCCTATATCGCTCGGCTCAGGTtccataacaa------agtgccacagacAGGTGGTTTAAAACCTCACagacctggccgggcgcagtggctcacgtctgtaatcccagcactttgggagaccgaggtaagcggatcacctgaggtcaggagtttgagactagcctgacccacatgaagaaacggcgtctctactaaaaatacaaaattagccaggcgtggtggcgggcacctgtaatgccagctactcaggaggctgaggcaaaagaatcgcttgaaaccgggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640174 566 + 50890351 tgagggaatgcatgtctgagggtgt-aagccactgggtttgaggcacctcgttacagcaggcccaggacactCACGC--------CCCCTCCTTCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCGAGGCCAAAC----GGGGTTACCGGTGCGAGCCCCGGCACTGCAGGTTTGCAGGT---G-CGGTTTCATTCCCAAGCCTGCCCCCTCACTCGCACAGACAAGCAAAGGGCACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcactgaaccacagggccttcctcCCTATATCGCTCGGctcgggttccataacaa------agtgccacagacgggtggtttaaaacctcacagacctggccgggtgcggtggctcacgtctgtaatcccagcactttgggaggccgaagtgagcggatcacctgaggtcaggagtttgagaccagcctgaccaacatggagaaactgcgtctctactaaaaatacaaaattagccgggcgtggtggcgggcacctgtaatgccagctactcaggaggctgaggcaggagaatcgcttgaaaccgggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 56360 471 + 138250 tgagggaatgcgcttccgagggtgg-aagcccctgggtttgcggtacacggttacagcagccccaggacacacacacaCCCTGCACACCTCCATGGAAGCCCTGGGACTCTTTCCTGCAGG----------------------------------------------------TTCTCAGGC---GCTGGTTTCATTCCCAAACCTGCCACCTCACTCGCACAAGCAACCACAGGGCACAC-AGACGG-------AGCCTCAGTTTCCACAGC-----------------------ACCTTCCTCCCTGTGCCACTGGGTTCAGGTTCCATAACGAAGTGCCAGTGCCACAGACAGGTGGGTGAAAACCTCA--GACCCggccgggcatggtggctcacgcctgt-gtcgca----tttgggag--------------------cgaggaccgga--ttgaa---agcatggccaacacagtgaagccccgtctctaccaaaaacacaaaaTTAgccgggcatggtggctcacgcctgtgatcccagcagtttgggagggcgaggcaggtggatcacctgaggtcaggag i calJac3.chr22_GL285922_random C 0 I 218 e canFam3.chr1 20132918 2038 - 122678785 I e macFas5.chr19 55829756 16 + 59248254 I a score=269628.000000 s hg38.chr19_GL949748v2_alt 1029704 179 + 1064304 gcagagggtgcagtgagccgagatcgcatcattacactccatcctgggcaataaaagcaaaactccatctcaa--------aaaaaaaaaaaaaaatcaca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctcagggccctcagggaggatccgctctggtctct s panTro4.chr19 59962300 179 + 63644993 gcagagggtgcagtgagccgagatcgcgtcattacactccatcctgggcaataagagcgaaactccatctcaa--------aaaaaaaaaaaaaaatcaca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctcagggccctcagggaggatctgctctggtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56909540 170 + 60714840 gcagagggtgcagtgagccgagatcacgtcattacactccatcctgggcaataagagcaaaactccatctcaa--------aaaaaaa---------caca-gtcccggaggctggaaggaccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctggcctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384993 178 - 106955855 gcagaggtggcagtgagccgagatcgcgtcattacactccatcctgggcaacgagagcaaaactccatttcaa--------aaaaaaaaaaaaaaa-atca-gtcctggaggctggaagtcccagatcaaggtgtgggcagggctggttccctctgagggcccccagggagaatctgctctggcctct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687977 184 + 64156825 gcaggggctgcagtgagcagaggtcgcaccattacactccagcctgggcaacaagagcgagactccatctcaatcactcactcaatcaattaat---caca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctggcctct i rheMac3.chr19 C 0 I 1362 s papAnu2.chr19 47938803 177 + 51301725 gcaggggctgcagtgagaagagatcgcaccattacactccagcctgggcaacaagagcgagactccatctcaa--------tcaatcaatcaat---cacacGTCCCTGAAGCTCGATGTCccagatcaaggtgtgggcaagGCTGGTTCCCTCTGAGGGCCCTCAGGGAGAAtctgctctggcctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640740 172 + 50890351 gcagaggctgcggtgagcagaggtcgcaccattacactccagcctgggcaacaagagcgagactccatctcaa--------tcaatcaatacata--caca-gtcccagaggctggaagttccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctgg----- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I a score=79619.000000 s hg38.chr19_GL949748v2_alt 1029883 101 + 1064304 ctccttggctcacaggtgaccatctcctctctccctcttcccttcctcttccctttggagctgtctCTTTTTTTTTTTTC-----ATttttccttttttaatttta s panTro4.chr19 59962479 95 + 63644993 ctccttggctcacaggtgaccatctcctctctccctcttcCCTTC-----------GGAGCTGTCTCTTTTTTTTTTTTCCTTTTATTTTTCCTTTTtaaatttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56909710 94 + 60714840 ctccttggctcacaggtgaccatctcctctctccctcttcCCTTC-----------GGAGCTGTCTTTTTTTTTTTTTCC-TTTTAtttttccttttttaatttta i ponAbe2.chr19 C 0 I 5419 s nomLeu3.chr10 103385171 90 - 106955855 ctccttggttcagaggtgaccatctcctctctccctcttcccttcctcttccctttgGAG----CTCTTTTTTTTTTTTC------------CTTTTTTAATTTTA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47938980 95 + 51301725 ctccttggctcacaggtgaccgtctcctctctcccttctcccttcctcttccctttggagctatctctctcttttttttt--------t---ctttttaaattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640912 73 + 50890351 -------------------------cttctctcccttctCCCTTCCTCTTCCCTTTGGAGCTGTCTCTCTCTTTTTTTTT--------TTTCCTTTTTAAATTTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=144.000000 s hg38.chr19_GL949748v2_alt 1029984 2 + 1064304 ga s panTro4.chr19 59962574 2 + 63644993 ta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103385261 2 - 106955855 ta i nomLeu3.chr10 C 0 I 652 s papAnu2.chr19 47939075 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640985 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=61656.000000 s hg38.chr19_GL949748v2_alt 1029986 101 + 1064304 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttgaactcaagcaatcctcctgctttggcctcccagagtgctgcaatttca-----CTG s panTro4.chr19 59962576 101 + 63644993 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttgacctcaagcaatcctcctgctttggcctcccagagtgctgcaatttca-----CTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103385915 101 - 106955855 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttggcctcaagcaatcctcctgctttcgcctcccaaagtgctgcaatttca-----CTG i nomLeu3.chr10 I 652 C 0 s papAnu2.chr19 47939077 140 + 51301725 t------------tttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggccgaatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640987 116 + 50890351 TGCATATAtatactttttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aacttttggcctcaagcaatcctcctgctttgccctcccaaagtgctgcgatttca-----CTG i chlSab2.chr6 C 0 I 43 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=27923.000000 s hg38.chr19_GL949748v2_alt 1030087 120 + 1064304 ------CCCCCAGCCTAtttttttttttttgggggggggagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccaggttcaaacaa s panTro4.chr19 59962677 111 + 63644993 ------CCCCCAGCCTAtttttttt---------gggggagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttggctcactgcaacctccgcctcccaggttcaaacaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103386016 118 - 106955855 ------CCCCCAACCTAttttttttttttttt--tttggagatggagtttcactcttgtcacacaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccaggttcaaacaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47939217 89 + 51301725 ccacctcgcccggctaagtttttgtattttt---agtagagacggggtttcact-gtgttagccaggatgg---------------tctcgatctcctg--------acctcgtga---------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=244297.000000 s hg38.chr19_GL949748v2_alt 1030207 367 + 1064304 ttctcctgcctcagcctcccaagtagct-ggactacaggcatccaccaccacaccggg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggctagtctcacactcctgac-ctc--gtgatccacctacctcagcctcccaaagtgctgggactgcaggcgtgagccaccacactcagtcTACTTGGCCTAttttttatatttcttt---gagacagggtctccctc-tgacacctgggctggagtacagtggcgcaatcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcatgcgccaccatgcccagcta s panTro4.chr19 59962788 367 + 63644993 ttctcctgcctcagcctcccaagtagct-ggactacaggcatccaccatcacacctgg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggctagtctcacactcctgac-ctc--gtgatccacctgcctcagcctcccaaagtgctgggactgcaggcgtgagccaccacactcagtcTACTTGGCCTAttttttatatttcttt---gagacagggtctccctc-tgacacctgggctggagtacagtggcgcagtcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcatgcgccaccatgcccagcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915223 368 + 60714840 ttctcctgcctcagcctctcaagtagct-gaaccacaggcatccaccaccacattagg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggcaagtctcaaactcctgacaatc--atgatccacctgcctcagcctcccaaagtgctgggattgcaggcgtgagccaccacactcagtcCACTTGGCCTAttttttatatttcttt---gagacggggtctgtctc-tgacacctgggctggagtacagtggcacaatcactgctcactgcagcctcaacctcccaggctcaagcaatcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcacgtgccaccatgcccagcta i ponAbe2.chr19 I 5419 C 0 s nomLeu3.chr10 103386134 375 - 106955855 ---ttctgcctcagcctcctgagtagct-ggactacaggcacctgccaccacacctgg--------ttaattttt---tgtat-------ctttactagagacggggcttcaccatgttggccaggctagtctcaaactcctgac-ctc--gtgatccacctgcctcggcctcccaaagtgctgggagtgcaggcgtgagccaccacacttggtcCACTCGGCCTAttttttatatttcttt---gagacggggtgtccctc-tgacacctgggctggagtacagtggtgcaatcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagcctcccaagtagctcccaagtagctggggccacaggcacgtgcccccatgcccagcta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47939306 368 + 51301725 tccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccttctttttaaattttatatgcatatatatactttttttcagacatggtctcactatgttgcccaggctggtctcaaacttttggc-ctcaagcaatcctcctgctttgccctcccaaagtgctgtgatt-----------tcaccac-------------ggcctattttttttttttttttttggaggtggagtttcattcttttcgcccaggctggagtgcaatggcgcgatctcagctcac-gcaactttcacctcccaggttcaaacaattctcctgcctcagc-----------ctcccgagtagctgggactacaggcatccgccaccatgcccggcta i papAnu2.chr19 C 0 I 1261 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=96516.000000 s hg38.chr19_GL949748v2_alt 1030574 200 + 1064304 GCACgtctgtttctgtgcgcaaatctccccttttcataaggacaccagtcactggattagggcccaccctaatgacctcattttcacttcaggacctctgtaaacacccacctctaaatgaagtcacatgctgagggatgggggttcaggatcccaacctatccttgggggtggaggacacaatggaattcataaTGCTC s panTro4.chr19 59963155 200 + 63644993 GCACgtctgtttctgtgcgcaaatttccccttttcataaggacaccagtcactggattagggcccaccctaatgacctcattttcacttcaggacctctgtaaacacccacctctaagtgaggtcacatgctgagggacgggggttcaggatcccaacctatccttgggggtggaggacacaatgaaattcataaTGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915591 200 + 60714840 GCACgtctgtttctgtgtgcaaatttccccttttaataaggacaccagtcactggattagggcccaccctatagacctcattttaacttcaggacctctgtaaacacccacctctaaatgaggtcacatgctgagcgacgggggttcaggatcccaacctatccttgggggtggaggacacaatggaattcataaTGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103386509 197 - 106955855 GCACgtctgtttgtgtgtgcaaatttccccttttaataaggacaccagtcactggattagggcccaccctaatgacctcattttaacttgaggacctccgtaaacacccacctgtaagtgaggtcacatgcggagggacagggggtcaggagcccaacctatcctt-ggggtggaggacacaaGGGAATCAGTAAAA--A i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=528242.000000 s hg38.chr19_GL949748v2_alt 1030774 703 + 1064304 CCGAAGTGGTTTTCGGCGGGGATCGTGAATTAGGTGTCCAGCGCGTAACACAC--AGACACCATCTGGTTCTCTGTGTGAGAAGGAGGGGGTTGCagcacacccgtcatgaataccagctctggagcaggacagacaggttcaaagcctggctccaccccgaccagctgcatgatcctggccaagtcacatcacttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaaaaggataataacatcacctgcctggtacaactgtATacttactcattcagtaagtattttctaagcacctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtgacagagctgcgtggaagctgacaggaggcccctctcaggaggtgacgcagaaactgggaccgggaaaatgaggcagggcccacgtgcggagacccagggaagggggatgcaggcagcaggcgcagcacgggtaaggcccaaaggcggga-CAGGGAGACTCCACTCACAGCTGGGCGCCCAGGAGTGCCGCCAGCTTCTGGTGTttt----gttttg---------------gttttttttctttttttttttgagatgaagtctcactctgccacccaggctggagtgcagtggtgtgatct s panTro4.chr19 59963355 715 + 63644993 CCGAAGTGGTTTTCGGCGGGGATCGTGAATTAGGTGTCCAGCGCGTAACACACAGAGACACCGTCTGGTTCTCTGTGTGAGAAGGA--GGGTtgcagcacacccgtcatgaatacgagctctggagcaggacagacgggtccaaaccctggctccaccccgaccagctgcacgatcctggccaagtcacatcgcttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaa---gataataacatcacctgcctggtacaactgtATacttactcattcggtaagtattttctaagcacctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtgacagagctgcgtggaagctgacaggaggcccctctcgggaggtgacgcagaaactgggaccgggaaaatgacgcagggcccatgtgcggagacccagggaaggggaatgcaggcagcaggcgcagcacgggtaaggcccaaaggcgcga-CAGGGAGACTCCACTCACAGCTGGGCGCCCAGGAGTGCCGCCGGCTTCTGGtgtttt----gttttgttttttttttctttttttttttttttttttttttttgagatgaagtctcactctgccacccaggctggagtgcggtggtgtgatct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915791 683 + 60714840 CCAAAGTGGTTTTCGGCAGGGATTATGAATTAGGTGTCCAGTGTGTAACACACAGAGACACCGTCTCGTTCTCTGTGTGAGAAGGA-GGGGTTGCGGCACACCCgtcatgaatacgagctctggagcaggagagacgggttcaaaccctggctccaccccgaccagctgcatgatcctgcccaagtcacatcgcttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaa--ggataataacatcacctgcctggtacaactgtATAGTtactcattcggtaagtattttctaa--------------gcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtaacagagctgggtggaagctgacaggaggcccctctcaggaggtgacacagaaactgggaccgggaaaatgaggcagggcccacatgcggagacccagggaaggggaatgcaggcagcaggcacagcacaggtaaggcccaaaggcgggagcaggGAGACTCCACTCACAGCTGGGTGCCCAGGAGTGCCGCCAGCTTCTGttgtttt-------------------------gtttttggtcttttcttttttgagatgaagtctcactccgccacccaggctggagtgcagtggtgtgatct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103386706 674 - 106955855 CCGAAGTGGTTTTCAGCGGGGATCATGAATTAGGTGTCCAGTGCGTAACACAC--ACACACCGTCTCGTTCTCTGTG---GGAGGA-GGGGTTGCAGCACACCCGTCCTgaatacgagctctggagcaggacagacggcttcaaaccctggctccaccccagccagctgcatgatcctggccaagtcacatcgcttctctgtgactcagtttactccttgttaaaaaaaaaa--------ggataacatcatcacctgcctggtacaactgtACAGttactcattcagtaagtattttctaagcacctgttactgggcactggaaatacagg-----------------------------gtggaccggacaTTCCAGTGCAGCTGAGAGCCACTTCCACTCGTGAGAGAATCTACCCGTGACAGAGCTGTGTGGAAGCTGACAGGAGGCCCCCCTCAGGAGGTGACGCAGAAACTGGGACCAGGAAAATGAAGCAGGGCCCACGTGCGGAGACCCAGGGAAGGGGAATGCAGGCAGCAGGCACAGCACGGGTAAGGCCCAAAGGCAGGAGCAGGGAGACTCCACTCACGGCTGGGCACCCAGGAGTGCCGCTGGCTTCTGTTGTTTGTTTGGTTTTGGtttttt--------cttctttttttttttttttttgagatgaagtctcactctgccacccaggctggagggcagtggtgtgatct i nomLeu3.chr10 C 0 M 1272 s rheMac3.chr19 60689523 671 + 64156825 CCGAAGTGGCTCTCAGCGGGGATCATGAATTAGGTGTCCAGTGCGTAACACACACAGACACCGTCCCGTTCTCTGTGTGAGAAGGt-ggggttgcagcacacctg--------------------------------agttcaaaccctggctccaaccagaccagctgcctgaccctggccaagtcacatcgcttctctgtgacgcagtttactcctcattagaaaaaaaaaaaa----ggataacagcatcacctgcctggtgcgactgtATAGttactcattcggtaagtattttctaagcatctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgcatagaccggacattccagtgcagctgagacccgcttccactcgtcagagaatctacccgtgacagagctgcatgggagctgacaggaggcccctctcaggagctgacacaaaagctgggaccaggaaaatgaggcagggcgcacgtgcggagacccagggaaggggaatgcaggtagcgggcacatcgcaggtgaggccccaaggcgggagcaggGAGACTCCACTCACAGCTGGGGACCCGGGAGTGCCGTCGGCTTCTGCTGTTTT----GGTTTGTT-------------Tttttctttttttttttttttgagatgaagtctcactctgccacccaggctggagtgctgtggtgtgatct i rheMac3.chr19 I 1362 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I a score=44226.000000 s hg38.chr19_GL949748v2_alt 1031477 91 + 1064304 tggcccatggcccactgcaacctctaccgcctgggttcaggcgatt-------ctgctgcctcagcctcccgagtactgggattacaggtgcccgcca s panTro4.chr19 59964070 91 + 63644993 tggcccgtggcccactgcaacctctaccgcctgggttcaagcgatt-------ctgctgcctcagcctcctgagtactgggattacaggtgcctgcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916474 98 + 60714840 tggcccatggcccactgcaacctctaccgcctgggttcaagcgattctgctgcctgctgcctcagcctcccgagtactgggattacaggtgcccgcca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60690194 84 + 64156825 -------tggctcactgcaacctctacagcctgggttcaaatgatt-------ctcctgcctcagcctcccgagtactgggattacaggtgcctgcca i rheMac3.chr19 C 0 I 1076 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I a score=108789.000000 s hg38.chr19_GL949748v2_alt 1031568 436 + 1064304 ccgcaccctgctaatttttgcatttttagtagagacggggtttcaccatcttggtcaggctggtcttgaattcttcacctcgtgatccacccgcctctgcctcccaaagtgcagggattacaggtgtgagccaccgcgcccagccTGtttttttttttttctttttatgagagggaagctcactcagtggcccaggctggagtgcagtggcgcgatctcagctcacagcaacctccgccgccagggctcaaacgatcctcccacctcagccttccacatagctg-aaccacaggcgcccgacaccacaagcagctacttttaaaattttttgtagaaatggggtttggctatgttgcttaggctggtctcgaatttctgagcttaggcaattcgcccacctcggcctcccaaagtgctgggattgcaggcgtgggcc s panTro4.chr19 59964161 436 + 63644993 ccgcaccctgctaatttttgcatttttagtagagatggggtttcaccatcttggtcaggctggtcttgaattcttcacctcgtgatccacccgcctctgcctcccaaagtgcagggattacaggtgtgagccaccgcgcccagccTGtttttttttttttctttttatgagagggaagctcactcagtggcctaggctggagtgcagtggcgcgatctcagctcacaacaacctccgccgccagggctcaaacgatcctcccacctcagccttccacatagctg-aaccacaggcgcccgacaccacaagcagctacttttaaaattttttgtagaaatggggtttggctatgttgcttaggctggtctcgaatttctgagctcaagcaattcgcccacctcggcctcccaaagtgctgggattacaggcatgggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916572 424 + 60714840 ccgcacccggctaatttttgcatttttagtagagacggggtttcaccatcttggtcaggctggtcttgaattcttgacctcgtgatccacccgcccccgcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccTG-------Ctttttctttttatgagagggaatctcactcagtggcccaggctggagtgcagtggctcaacctcagctcactgcaacctccgccgccagggctcaaacgatcctcccaactcagccttccacatagctgaaaccataggcgcccgacaccacgagcagctacttttaaa--tttttgtagaaatggggtttggctatgttgcctaggctggtctcgaatttct--acctcagcaatccgcccacctcagcctcccaaagtgctggga-tacaggcatggg-c i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=17769.000000 s hg38.chr19_GL949748v2_alt 1032004 54 + 1064304 acagtgcctggccTGTTGTTTTGTTTATCTGGGAACTGCCTCAACTTTTttttt s panTro4.chr19 59964597 48 + 63644993 acagtgcctggtcttttgttttgtttATCTGGGAACTGCCTCAAC------ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916996 51 + 60714840 aca-tgcctggccTGTTG-TTTGTTTATCT-GGAACTGCCTCAACTTTTTTTTT i ponAbe2.chr19 C 0 I 803 s chlSab2.chr6 47641146 47 + 50890351 ACAGTGCCTGGCCTGTTGTCTTGTTTATCTGGGAACTGCCTCAACCt------- i chlSab2.chr6 I 43 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=37043.000000 s hg38.chr19_GL949748v2_alt 1032058 137 + 1064304 ttttttttttttttggacacagggtctcaccccgagtgcagtggtacaatcaaagctcactgcaggccgggcgtggtggctcacatctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtca s panTro4.chr19 59964645 137 + 63644993 ttttttttttttttggacacagggtctcaccccgagtgcagtggtacaatcaaagctcactgcagTccgggtgcggtggctcacatctgtaatcccagcactttgggagaccgaggcgggcagatcacctgaggtca i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47641193 137 + 50890351 ttttttttttttttggacacagggtctcaccctgagtgcagtggtacaatcaaagctcactgcaggccaggcgcggtggctcacttctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtca i chlSab2.chr6 C 0 I 12 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=13057.000000 s hg38.chr19_GL949748v2_alt 1032195 138 + 1064304 accagcctgaccaacatggtgaaaccctgtctctacctaaaacaaaaaagtAgccgggcatggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattatttgaaaccaggagatggaggttg s panTro4.chr19 59964782 138 + 63644993 accagcctgaccaacatggtgaaaccctgtctctacctaaaacaaaaaagtAgccgggcatggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattatttgaaaccaggagatggaggtta i panTro4.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641330 12 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=19582.000000 s hg38.chr19_GL949748v2_alt 1032333 74 + 1064304 cagcctgaccaacaggaagaaaccccgtctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctg s panTro4.chr19 59964920 74 + 63644993 cagcctgaccaacatgaagaaaccccgtctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctg i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47641342 74 + 50890351 cagcctgaccaacatgaagaaacgccgtctctattaaaaatacaaaattagccaggcatggtggcgcatgcctg i chlSab2.chr6 I 12 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=13407.000000 s hg38.chr19_GL949748v2_alt 1032407 26 + 1064304 taatcccagctactcgggaggctgag s panTro4.chr19 59964994 26 + 63644993 taatcccagctactcgggaggctgag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47940935 26 + 51301725 taatcccagttactcggaaggttgag i papAnu2.chr19 I 1261 C 0 s chlSab2.chr6 47641416 26 + 50890351 taatcccagttactcggaaggttgag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=236845.000000 s hg38.chr19_GL949748v2_alt 1032433 317 + 1064304 gcaggagaatcacttgaacccaggaggtggaggatgcc-----------------------gtgagccaagatcccgtcattgca--ccagcctgggcaacaagagcaaaactccgtctt--aaaaaaaaaaaaaaaaaaTCCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaagtagttgggactacaagtgcacaccatcacgcctgcctcattgttttttatttt----------tttttt----gagatggagtctcactctgtcacccaggctggagtgcagtggcgccatctcggctcactgcaagctccacctcccgggttcacg----------------------c s panTro4.chr19 59965020 341 + 63644993 gcaggagaatcacttgaacccaggagatggaggatgctgaacccaggagatggaggatgcagtgagccaagatcccgccattgca--ccagcctgggcaacaagagcaaaactccgtctttaaaaaaaaaaaaaaaaaaaTCCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaagtagttgggactacaagtgcacaccatcatgcctgcctaattgttttgta-ttt----------tttttt----gagatggagtctcactctgtcacccaggctggagtgcagtggcgccatctcggctcactgcaagctccagctcccgggttcaca----------------------c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103388653 320 - 106955855 gcaggagaatcacttgaacccaggaggtggaggatgca-----------------------gtgagccaagatcccaccattgta--ccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaaaaaaacaaa-aCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaaatagttgggactacaagtgcacaccatcacgcctgcctaattgttttgtttttt----------tttttttttggagatggagtctcactctgccacccaggctggagtgcagtggcgccatctcggctcactgcaagccccacctcccgggttcaca----------------------c i nomLeu3.chr10 M 1272 C 0 s papAnu2.chr19 47940961 317 + 51301725 gcaggagaatcacttgaacccaggaggcggaggttgta-----------------------gtgagccgagatcctggcattgca--ccagcctgggaaacaagagcaaaactccgtctc--aaaaaaaaaaa---------cctcactgcagcctcaacctcccaggctcaagcaatcctcccacctcagcctcccaagtaggtgggactacaggtgcacaccatcatgtctgcctaattgttttttgtttttttgttttg-tttttt----gagacggagcctcgctctgtcacccaggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctccctggttcagg----------------------c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47641442 339 + 50890351 gcaggagaatcacttgaacccaggaggcggaggttgca-----------------------gtgagccgagatcgtgccattgcactccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaa------------ctcactgtagcctcaacctcccaggctcaagcaatcctcccacctcagcctcccaagtagttgggactacaggtgcacaccatcacgcctgcctaattgttttttgtttttttgttttgttttttt----gagacggagtcacactctgtcgcccagactggagtgcagtggcgcaatctcagctcactgcaagctccacctcccaggttcaggccattctcctcccgggttcacac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=116073.000000 s hg38.chr19_GL949748v2_alt 1032750 115 + 1064304 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacgcccggctaattttttt-------------------------gtgtttcttagtagacacggggtttcaccgtgttggccaggatgg s panTro4.chr19 59965361 140 + 63644993 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacgcccggctaatttttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtttcaccgtgttggccaggatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56917850 115 + 60714840 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccaccaccatgcccggctaactttttt-------------------------gtattttttagtagacacggggtttcaccgtgttagccaggatgg i ponAbe2.chr19 I 803 C 0 s nomLeu3.chr10 103388973 115 - 106955855 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacacccggctaattttttt-------------------------gtattttttagtagacacagggtttcaccgtgttagccaggatgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47941278 115 + 51301725 cattctcctgcctcagcctcctgagtagctggaactacaggaacccgccaccacgactggctaattttttt-------------------------gta-tttttagtagagacggggtttcaccgtgttagccaggatgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47641781 116 + 50890351 cattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccactgcacccagctaatttttct-------------------------gtattttttagtagagacggggtttcaccatgttagccaggatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=863411.000000 s hg38.chr19_GL949748v2_alt 1032865 493 + 1064304 tctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtga--------gcctg-cacgcctgcctgattgttttgtattttttgtagagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCTAGTCGGGAGCTGGGAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATCTCACAaac--tgatcttcccaaaacttctgtctcccaaagtgccgggatgacaggcgtgaaccgctgcacctggccTGCCCCAGTGTGGTAGAATACACACCACATAAAATGGACGATCTTCACTATTTTTAAATCCACTGCTGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGTCACAGACACAGCTTTACTTAATCCTCTAGAG s panTro4.chr19 59965501 503 + 63644993 tctcgatctcctgaccttgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccg-cacgcctgcctgatcgttttgtattttttgtagagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTCTGCTTTGTGTTCTTTCTAGTCTGGAGCTGGGAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATCTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtgccgggatgacaggcgtgaaccactgcacctggccTGCCCCAGtgtgatagaatacacaccacataaaatggaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGtcacagacacagctttacttaatcctctagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56917965 502 + 60714840 tctcaatctcctgaccttgtgatccacccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcctg-caagcctgcctaattgttttgtattttttgtacagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCCAGCCTGGTGCTGGAAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATGTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtgccaggataacaggcgtg-accactgcacctggccTGTCCaaatgtggtagaatacacaccacataaaatgtaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGTCACAGACACAGTTTTACTTAATCCTCTAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389088 505 - 106955855 tctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgccca-caagcctgcctaattgttttgtattttttgtagagatgaggtcttgctatgttgcccagactgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCTAGTCTGGAGCTGGAAAGAGCTACAGCTTCCAGCTCTgtcagggtgtcatctcacaaactgtgatcttcccaaaacttctgtctcccaaagtgccaggaagacaggcgtgagccactgcacctggccTGCCCaaatgtggaagaatacacaccacataaaatgtaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGGTTTGCTAAAAAAAAGTCACAGACACAgctttacttaatcctctagtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60691354 498 + 64156825 TctccatctcctgaccttgtgatccacccaccttggcttcccaaagtgctgggattacacgcgtgagccaccgcgcccatcacgcctgcctaattgttttgtattttttgtagagatgaggtgttgctctgttgcccaggctgatctcaaactccCTGGTGAACAAGGCTGTGGGCA----CTTCCTGGGGCTCTTTGCTTTGCGTTCTTTCTAGTCTGGCGCTGGAAAGAGCTGCGGCTTCCAGCTTTGTCAGAGTGTCA-CTCACAAACTgtgatcttcccaaagcttctgtctcccaaagtg-cgggatcacaggcgtgaacccttgcaccggaccTGCCCaaatgtggcagaatacacacgacataaagtgcaccatcttcactatttttaaatCCACTGATGTCTTCATGCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAATGTCACAGACACAGCTTTACTTCATCCTCTAGAG i rheMac3.chr19 I 1076 I 72 s papAnu2.chr19 47941393 499 + 51301725 tctcgatctcctgaccttgtgatccacccacctcggcctcccaaagtgctgggattacacgcgtgagccaccacacccatcacGCCTGCCtaattgttttgtactttttgtggagatgaggtcttgctatgttgcccaggctgatctcaaactccctgaTAAACAAGGCTGTGGGCA----CTTCCTGGGGCTCTTTGCTTTGCGTTCTTTCTAGTCTGGCGCTGGAAAGAGCCACGGCTTCCAGCTTTGTCAGAGTGTCA-CTCACAAACTGTGATCTTCCCAAAACTTCTgtttcccaaagtgccgggatcacaggcgtgaacccTTGCACCTGGCCTGCCCAAATGTGGCAGAATACACATGACATAAAATGCACCATCTTCACTATTTTTAAATCCACTGATGTCTTCACGCCTGGCTGTTGATCTTAGGAAAACACCAAAAAGCTGGTACTTGATTTGCT--AAAAATGTCACAGACACAGCTTTACTTCATCCTCTAGAG i papAnu2.chr19 C 0 I 71 s chlSab2.chr6 47641897 499 + 50890351 tctcgatctcctgaccttgtgatccgcccgccttagcctcccaaagtgctgagattacaggcatcagccaccgcgcccatcacgcctgcctaattgttttgtattttttgtagagatgaggtcttgctctgttgcccaggctgatctcaaactccCTGATGAACAAGGCTGTGGGTA----CTTCCTGGGGCTCTTTGCTTTGCATTCTTTCTAGTCTGGCACTGGAAAGAGCCACGGCTTCCAGCTTTGTCAGAGTGTCAGCTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtg-cgggatcacaggcgtgaacccttgcacctggccTGCCCaaatgtggcagaatacacatgacataaaatgcaccatcttcactatttttaaatCCACTGATGTCTTCATGCCTGGCAGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAATGtcacagacacagctttacttcatcctctagag i chlSab2.chr6 C 0 I 72 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I a score=276317.000000 s hg38.chr19_GL949748v2_alt 1033358 117 + 1064304 Aggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtggctggatcatgaggtcaggagatcgagaccatcctggctaacacggt--gaaaccccgtctcta s panTro4.chr19 59966004 117 + 63644993 aggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtggccggatcatgaggtcaggagatcgagaccatcctggctaacacggt--gaaatcccgtctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918467 117 + 60714840 Aggccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagattgagaccatcctggctaacacggt--gaaaccccgtctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389593 117 - 106955855 aggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcggatcatgaggtcaggagattgagaccatcctggccaacacggt--gaaaccccgtctcta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60691924 117 + 64156825 Aggccgggcatggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcacaaggtcaggagatcgagaccatcctggctaacccggt--gaaaccctgtctcta i rheMac3.chr19 I 72 C 0 s macFas5.chr19 55829772 117 + 59248254 Aggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacaccgt--gaaaccccgtctcta i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47941963 119 + 51301725 cggccgggcgcggtggctcaagcctgtaatcccagcactctgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaatgcggtacgaaaccccgtctcta i papAnu2.chr19 I 71 M 2539 s chlSab2.chr6 47642468 117 + 50890351 Aggccgggcgcggtggctcaagcctgtaatcccagcacttagggaggcggaggcgggcagatcacgaggtcaggagatcgagaccatcctggctaacacagt--gaaaccccgtctcta i chlSab2.chr6 I 72 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I a score=10881.000000 s hg38.chr19_GL949748v2_alt 1033475 8 + 1064304 gtaaaaaa s panTro4.chr19 59966121 8 + 63644993 gtaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918584 8 + 60714840 ctaaaaaa i ponAbe2.chr19 C 0 I 135 s nomLeu3.chr10 103389710 8 - 106955855 ctaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692041 8 + 64156825 ctaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829889 8 + 59248254 ctaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642585 7 + 50890351 -ctaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=227149.000000 s hg38.chr19_GL949748v2_alt 1033483 173 + 1064304 tataaaaaattagccgggcgtggtggcaggcgcctgtagtcccccgccactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttggagtgagccgagatgt-gccactgtcctccagcctgggcgacaaagcaagataccgtctcag--------aaaaaaaaaaaa-a s panTro4.chr19 59966129 142 + 63644993 tataaaaaattagccaggcgtggtggcgggcgcctgtagtcccccgccact--------------------------------cgggaggcggagcttggagtgagccgagatgt-gccactgtcctccagcctgggcgacaaagcaagataccgtctcag-------aaaaaaaaaaaaa-a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918727 172 + 60714840 tacaaaagattagccgggcgtggtggcgggcgcctgtagt-ccccgccacttggggggctgaggcaggagaatggcatgaacccgagaggtggagcttgcagtgagccgagatgt-gccactgcactccagcgtgggcgacagagcaagacaccgtctcaa--------aaaaaaaaagaa-a i ponAbe2.chr19 I 135 C 0 s nomLeu3.chr10 103389718 180 - 106955855 tataaaaaattagccgggcgtggtggcaggcgcctgtagt-ccccaccactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatgc-gccactgctctccagcctgggcgacagagcaggacactgtctcaaaaaaaaaaaaaaaaaaaaaa-a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692049 171 + 64156825 tacaaaaaactagccgggcgaggtggc-agcgcctgtagt-ccccgctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagctgagatccggccaccgcactccagcccgggcaacagagcgagactccatctcaa--------aaaaaaagaaaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829897 169 + 59248254 tacaaaaaactagccgggcgaggtggc-ggcgcctgtagt-cccaggtactcgggaggctgaggcaggagaatggcgtcaaccagggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgaga-tccgtctcaa--------aaaaaaa-aaaa-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642592 171 + 50890351 tacaaaaaattagccgggcgtggtggtgggtgcctgtagt-cccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagtttgcagtgagccgagatcacgccactgcactccagcttgggcaacagagcgaga--gagtctcaa--------aaaaaaaaaaaaa- i chlSab2.chr6 C 0 I 19 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=244087.000000 s hg38.chr19_GL949748v2_alt 1033656 250 + 1064304 CCcctctagagaatcccagaaaatagaagga---attattccatttcccggaagaggaacgtgtggctaagagaggaggcatcacctgcccaggtgtgtccagccggGGTCCT-------------------CACTGTCTCAGGGACCTCAGTGCTCCGGACACCTGTGTCCACAAGCCAGAGACAGGATCAGAGGCGCCCTGGGTGggattgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat s panTro4.chr19 59966271 253 + 63644993 cccctctagagaatcccagaaaatagaaggaattattattccatttcccggaagaggaacgtgtggctaagagaagaggcatcacctgcccaggTGTGTCCAGCCGGGGTCCT-------------------CACTGTCTCAGGGACCTCAGTGCTCCGGACACCTGTGTCCACAAGACAGAGACAGGATCAGAGGCGCCCTGGGTGggattgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918899 267 + 60714840 aTCCTCTAGAGAATCCCAGAAAATAGAAGGA---ATTATTCCATTTCCCGGAAGAGGAACGTGTGGCTAAGAG--GAGGCATCACCTGCCCAGGTGTGTCCAGCCTGGGTCCTCGCTGCTCACAAGGCCCTGCACTGTCTCAGGGACCTCAGTGCTCTGGCCACCTGTCTCCACAAGCCAGAGACAGGATCAGAGGCGCCCCGGGTGGGACTGCCTGGGACAGTGTGCATGAAGGTGACAGTGATgtacctggtacacagcaggtgcttaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389898 268 - 106955855 atcttctagagaatcccagaaaatagaatt----attattccatttcccggaagaggaacgtgtggctaagagaggaggcatcacctgcccaagTGTGTCCAGCCTGGGTCCTCGCTGCCCACAAGGCCCTGCACTGTCTCAGGGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGACAAGATCAGAGGCGCCCTGGGTGggactgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692220 198 + 64156825 -------------------------------------------------------------------------aGGAGGCATCACCTGCCCAGGTGCATCCAGCCTGCATCCTTGCTGCCCACAAGGCCCTGCACTGTCTCA-GGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGACAGGAGGAGAGGCGCCCCGGGCGggattacctcggacagtgtgcatgaaggcaacagtgctgtacctggtacacagcaggtgcttaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55830066 198 + 59248254 -------------------------------------------------------------------------aGGAGGCATCACCTGCCCAGGTGCATCCACCCTGGGTCCTTGCTGCCCACAAGGCCCTGCACTGTCTCA-GGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGATAGGATGAGAGGCGCCCCGGGCGggattacctcggacagtgtgcatgaaggcaacagtgctgtacctggtacacagcaggtgcttaat i macFas5.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=553585.000000 s hg38.chr19_GL949748v2_alt 1033906 388 + 1064304 aaatgTT-CATCCACCTCTGAGACTCTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCGTAGTGCCTCTCACCTACCCGACAACAGTGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAGT------------atgaatgaatgaatgaaccaacgaatg------------tgcacctgcacctgcctccctagggctgtgagtggcacaaggacagctctggttcatctcacacctccagcacct-ggtcaggtctgagatcacgtctgctaaataaatgaGGTCCCACAACTCCCCCATTCCTTGTTCATTTCCTGAGTACCCGTTTACTGAGCGGGGCACATTGACTCTGAAGAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC s panTro4.chr19 59966524 378 + 63644993 aaatgTT-CATCCACCTCTGAGACTCTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCATAGTGCCTCTCACCTACCCGACAA------------------TCTTGATCCCCAAGGGCACAGCAGGGG-CTCAGT--------atgaatgaatgaatgaatgaaCCAACAAACG------------TGCACCTGCACCTGCCTCCCTAGGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTGAGATCACGTCTGCTAAATAAATGAGGTCCCACAACTCCCCCGTTCCTTGTTCATTTCCTGAGTACCTGTTTACTGAGCGGGGCACATTGACTCTGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919166 347 + 60714840 aaatgtt-cattCACCTCTGAGACTCTGAGGCATTGC---------------------------------CCTCTCACCTACTCCACAACAGTGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT------------ATGAATGAATGAATGAACC--------------------TGCACCTGCACCTGCCTCCCTATGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCATCTCACACCTCCAGCACCC-GGTCAGGTCTGAGATCACATCTGCTAAATAAATGAGGCCCCACAACTCCCATTTTCCTTGTTCATTTCCTGAGTACGCTTCTACTGAGCAGGGCACATTGACCCTTAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390166 407 - 106955855 aaatgTT-CATCCACCTCTGAGA--CTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCATAGTGCCTCTCACCT---CCACAACAGCGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAATatgaatgaatgaatgaatgaatgaatgaacgaacgaatgaaCGAACAAACCTACACCTGCACCTGCCTCCCTATGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCATCTCACACCTCCAGCACCT-GGTCAGGTCTGAGATCACGTCTGCTAAATAAATGAGGTCCCACAACTCCCTCTTTCCTTGTTCATTTCCTGAGTACCCATTTACTGAGCGGGGCACATTGACTCTGAACAAGAAAGCTTTGGCCCCTT-CAGTGCCAGACTAGAAAAGAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692418 396 + 64156825 aaatatt-catCCACCTCTGAGACTCTGAGGC--TGT--TCTCACTGTTCTTTGTGATCTCACCATAGCGCCTCTCACCTACTCCACAACAGCGCCA----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT------------atgaatgaatgaatgaatgaatgaatgaatgagcgaatCTGCACCTGCACCTGCCTCCCTATGGCTATGAGTGGCACAAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTCAGATCGCCTTTACTAAATAAATGAGGTCCCACAACTCCCCCTTTCCTTGTTCATTTCCTGAGTACCCGTTAACTGAGTGGGGCACATTGACTCCGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAACAAAC i rheMac3.chr19 C 0 I 37 s macFas5.chr19 55830264 404 + 59248254 aaatatt-catCCACCTCTGAGACTCTGAGGC--TGT--TCTCACTGTCCTTTGTGATCTCACCATAGCGCCTCTCACCTACTCCACAACAGCGCCA----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT----atgaatgaatgaatgaatgaatgaatgaatgaatgaatgaGCGAATCTGCACCTGCACCTGCCTCCCTATGGCTATGAGTGGCACGAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTCAGATTGCCTTTACTAAATAAATGAGGTCCCACAACTCCCCCTTTCCTTGTTCATTTCCTGAGTACCCGTTAACTGAGTGGGGCACATTGACTCCGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAACAAAC i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 57049 356 + 138250 aaaCGTTACACCCACCT--------CTAAGGCATCACCCTCTCCCTGTTCTTTGTGATCTTACCACAGCGCCTCTCGCCTACTCCACAACATCCACAGTGCGCTCCCTCTTAATCCCCAAGGGCACAGGAGGGGACTCAAC------------ACGTGTGAATGAGTGA------------------------GCGCCTGCgcctgcctccctacagctgtgagtggcacgaggacagctttagttcatctcacacctccagcacctgggtcaggtctcagatcacgtttgctaaataaatgaGGTCCCACAACACCC-CATTCTTCGTCCACTT---------------ACTGAGCAGGGCACATCGACTCTGACCAAGAAAGCTTTGGCCCTTTCCAGTGCCAGACAAGGAAAC---- i calJac3.chr22_GL285922_random I 218 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=8955.000000 s hg38.chr19_GL949748v2_alt 1034294 9 + 1064304 AAAGCAgct s panTro4.chr19 59966902 9 + 63644993 AAAGCAgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919513 9 + 60714840 AAAGCagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390573 9 - 106955855 AAAGCAgct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55830668 9 + 59248254 AAAGTAgcc i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 57405 9 + 138250 AAAGGGGTC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60692814 37 + 64156825 I a score=53888.000000 s hg38.chr19_GL949748v2_alt 1034303 38 + 1064304 gggcatggtggctcatgcctgtaatcccagcactttgg s panTro4.chr19 59966911 38 + 63644993 gggcatggtggctcatgcctgtaatcccagcactttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919522 38 + 60714840 gggcgcggtggctcacgcctgtaatcccagcactttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390582 38 - 106955855 gggcgtggtggctcacgcctgtaatcccagcactttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55830677 38 + 59248254 gggcgcggtggctcacacctgtaatcccagcactttgt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642782 38 + 50890351 gggcacagtggctcacacctgtaatcccagcactttgg i chlSab2.chr6 I 19 C 0 s calJac3.chr22_GL285922_random 57414 25 + 138250 GGGCACGGT-GCTCATGCCTATAATC------------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60692814 37 + 64156825 I a score=227546.000000 s hg38.chr19_GL949748v2_alt 1034341 118 + 1064304 gaggctgaggcaggcggatcacaaggtcaggaattcgagaccagcctggccaacatagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcacccgcctata s panTro4.chr19 59966949 118 + 63644993 gaggctgaggcaggcggatcacaaggtcaggaattcgagaccagcctggccaacatagtgaaaccccgtctctattaaaaatacaaaaattagccgggcatggtggcacacgcctata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919560 118 + 60714840 gaggctgaggcgggcggatcacaaggtcaggaatacgagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgcacacctata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390620 118 - 106955855 gaggctgaggcggacagatcacaaggtcaggagttccagaccagcctgaccaacatagtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacacacctata i nomLeu3.chr10 C 0 M 2381 s rheMac3.chr19 60692851 118 + 64156825 ACgactgaggcagggggatcacaaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctctactgaaaatacaaaaatgagccagccatggtggcacacgcctata i rheMac3.chr19 I 37 C 0 s macFas5.chr19 55830715 118 + 59248254 gaggccgaggcagggggatcacaaggtcaggagttcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaatgagccagccatggtggcacacgcctata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642820 118 + 50890351 gaggctgaggcgtggggatcacaaggtcaggagttcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacagaaatgagccagccatggtggcacacacctata i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57439 79 + 138250 --------------------------------------gaccagcctggccaaaacagcaaaa-cccatctctactaaaaacacaaaaatcagctgcgcgtggtggtgggcgcctgtg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=92130.000000 s hg38.chr19_GL949748v2_alt 1034459 56 + 1064304 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggctgcagt s panTro4.chr19 59967067 56 + 63644993 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggctgcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919678 56 + 60714840 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60692969 56 + 64156825 --------gtctcgggaggctgaaggaggagaatcgcttgaacccaggaggcggaggttgcagt i rheMac3.chr19 C 0 M 558 s macFas5.chr19 55830833 56 + 59248254 --------gtctcgggaggctgaaggaggagaatcacttgaacccaggaggcggaggttgcagt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642938 56 + 50890351 --------gtctcgggaggcttaggtaggagaatcgcttgaacccaggaggcggaggttgcagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57518 64 + 138250 agcccagctactcggaaggctgaggcaggagaattgctcaaactcaagaggtggacgctgcggt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M a score=65810.000000 s hg38.chr19_GL949748v2_alt 1034515 65 + 1064304 gagccaagatcgcatcattgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag s panTro4.chr19 59967123 65 + 63644993 gagccaagatcgcatcattgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919734 65 + 60714840 gagccaagattgcgtcactgcactctagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55830889 81 + 59248254 gagccgagatagtgtcactgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaaaaaTTGGTAAgaggccag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642994 94 + 50890351 gagccaagatctcgtcactgcactatagcctgggtgacag-agcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaaTTGCTAAgaggccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57582 66 + 138250 gagcagagatcacgccactgcactccagcctggacagcagcagcaaaactccatctc-------------aaaaata----------------aa i calJac3.chr22_GL285922_random C 0 I 66 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693025 558 + 64156825 M a score=115958.000000 s hg38.chr19_GL949748v2_alt 1034580 147 + 1064304 gtcttgctctgtcatccaggttagagtgcagtggcacaaatacggctcactgcagccttgaactctcgggctcaagtgatcctcttgcctcagcctcctgagtagctgggactgtaggcacatgccaggatgcccggctaatttttt s panTro4.chr19 59967188 134 + 63644993 gtcttgctctgtcatccaggttagagtgcagtggcacaaacacggctcactgcagccttgaactcccgggctcaagtgatcctcttgcctcagcctcctgagtagctgggactgt-----------aggatgcccggctaa--tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919799 147 + 60714840 gtcttgctctgtcatccaggttagagtgcagtggcacaaacacggctcactgcagccttgaactcccgggctcaagtgatcctcctgcctcggcttcatgagtagctgggactataggcacaggccaggatgcccggctaatttttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55830970 147 + 59248254 gtcttgctctgtagtccaggttagtgtgcagtggcacaaacacggttcactgcagccttgaactcctgggctcaagcaatcctcctgcctcagcctcctgagtagctggggctataggcacacgccaggatgcccggctaatttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643088 147 + 50890351 gtcttgctctgtcgtccaggctagagtgcagtggtgcaaacacggctccctgcagccttgaactcccaggctcaagcgatcctctggcctcagcctcctgagtagctggggctataggcacacgctaggatgcccagctaatttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693025 558 + 64156825 M a score=10920.000000 s hg38.chr19_GL949748v2_alt 1034727 8 + 1064304 tttttttt s panTro4.chr19 59967322 8 + 63644993 tttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919946 8 + 60714840 tttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60693583 8 + 64156825 TTTttttt i rheMac3.chr19 M 558 C 0 s macFas5.chr19 55831117 8 + 59248254 tttttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643235 8 + 50890351 tttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M a score=278341.000000 s hg38.chr19_GL949748v2_alt 1034735 354 + 1064304 t----aatctttggtacacacaaggtctcactatgcttcctaggctggtctc-taactcctgagctcaagcaatcctaagagaagagattttaaatgtggtcaccacaaaaacagg-----taagtatttgaggtaatgcatatgttaattagcttgatttagccattctacaatgtatacaatgtacatcatgctgtacataatatatacaagtatacatgtcaactaaacaataaaTAATTTTAGTGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGGATGGTCCCAGTTTTACATAAAAATATATAAAT--ACACACACAAACCTATTATAAACAAGACTAGAAAG--A s panTro4.chr19 59967330 353 + 63644993 t----aatctttggtacacacaaggtctcactatgcttcctaggctggtctc-taactcctaagctcaagcaatcctaagagaagagattttaaatgtggtcaccacaaaaaca-g-----taagtatttgaggtaatgcatatgttaattagcttgatttagccgttctacaatgtatacaatgtacatcatgctgtacataatatatacaagtatacatgtcaactaaacaataaaTAATTTTAGTGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGGATGGTCCCAGTTTTACATAAAAATATATAAAT--ACACACACAAACCTATTAGAAACAAGACTAGGAAG--A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919954 348 + 60714840 ttttaaatgtttggtactcacaaggtctcactatgcttcctaggctggtctcttaactcctgagctcaagcaaACctaagagaagagattttaaatgtggtcaccacaaaaacagg-----taagtatctgaggtaatgcatatgttaattagcttgattgagccactctacaatgtatacaatgtacatcatgttgtacataatatatacaagtgtacatgtcaactaaacaaTCAATAATTTTAATGTATTCTTGAGTCTATTTAAAGATGACCAAGAATAGAAAAGCtagaggatggtcccaattttacataaaaatatataaat--acacacac-------------acaagactggaaagaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60693591 361 + 64156825 t----aatctttggtacacacaaggtctcactatgcctcctacgctggtctc-taactcctgagctcaagcaatcctaagagaagagattgtaaatgtagtcaccacaaaaacaggtaatataagtatttgaggtaatgcatatgttaattagcttgatttagtaattctacaatgtatacaatgtacatcatgttgtacgtaatatatacaagtgtacctgtcaactaaacaataaaTAATTTTAATGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGTATGGTCCCAGTTTTACATGAAAATATATAAATTCACACACACAAACCAATTAGAAACAAGACTGGAAAG--A i rheMac3.chr19 C 0 M 2020 s chlSab2.chr6 47643243 347 + 50890351 -----aatctttggtacacacaaggtctcactatgcttcctacactggtctc-taactcctgagctcatgcaatcctaagagaagagattgtaaatgtggtccccacaaaaacagg-----taagaatttgatgtaatgcatatgttaattagcttgatttagtaattctacagtgtatacaatgtacatcatgttgtacgt----tatacaagtgtacatgtcaactaaac----aataaTTTTAATGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTGGagtatggtcccagttttacataaaaatatataaattcacacacacaaaccaattagaaacaagactggaaag--a i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e macFas5.chr19 55831125 0 + 59248254 C a score=28204.000000 s hg38.chr19_GL949748v2_alt 1035089 58 + 1064304 TCCA---------TAAAAGTGATTCTCCTGGGGCTGGTGCAGATCAAAGttgtttagttctgtcttc s panTro4.chr19 59967683 58 + 63644993 TCCA---------TAAAACTGATTCTCCTGGGGCTGGTGCAGATCAAAGGTGTTTAGttctgtcttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56920302 58 + 60714840 tcca---------taaaagtgattctcctggggttggtgcagatcaaaggtgtttAGttctgtcttc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47643592 67 + 50890351 tccatcaaaactttaacagtgattctcctggggttggtgcagatcaaaggtgtttagttctgtcttt i chlSab2.chr6 I 2 I 2 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e macFas5.chr19 55831125 0 + 59248254 C e rheMac3.chr19 60693952 2020 + 64156825 M a score=141911.000000 s hg38.chr19_GL949748v2_alt 1035147 188 + 1064304 ttttttattgagacagagtctcactctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcaccctgagtagctgagattacaggtgtgcaccaccacgcctggctaa-tttttgta-tttttagtagagacagggtttc s panTro4.chr19 59967741 188 + 63644993 ttttttattgagacagagtctcactctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcaccctgagtagctgagattacaggtgtgcatcaccacgcctggctat-tttttgta-tttttagtagagacagggtttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56920360 188 + 60714840 ttttttattgagacagagtctcactctgtcacccaggctaaaatgcagtggcacagtctcagctcaccgcaacctccgcctcccgggttcaagcaattctcctgcctcagcaccctgagtagctgggattacaggcgtgcaccaccatgcctggctaa-tttttgta-tttttagtagagacagggtttc i ponAbe2.chr19 C 0 M 668 s macFas5.chr19 55831125 190 + 59248254 tttttttttgagactgagtcttgctctgtcacccaggctagagtgcagtggccagatctcagctcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctctcgagtagctgggactacaggcgcccgccacctcgcccggctagttttttgtattttttagtagagacggagtttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643661 188 + 50890351 cttttttttgagacgaagtcttgctctgtcacctaggctggaatgcagtggtgtgatctcagctcactgcaacctccgcctcccggcttcatgccattctcctgcctcagcctcccaagcaggtgggattacaggtgtgcaccaccacacccggctaa-tttttgta-tttttagtagaaacagggtttc i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=8283.000000 s hg38.chr19_GL949748v2_alt 1035335 15 + 1064304 accatgttggccagg s panTro4.chr19 59967929 15 + 63644993 accatgttggccagg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831315 15 + 59248254 accatgttagccagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643849 15 + 50890351 accatgttggccagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=226360.000000 s hg38.chr19_GL949748v2_alt 1035350 310 + 1064304 ctggtctcgaactcctgacctcaagggatccacctgcctcagcctcccaaagtgctgggattaacaggcgtgagccactgtgcccagccAGTTCTGTCTTCTTTACATTGCAGTATTTTATAAATGTCCCATAACAAACACATATTTCTTTAACCATGGTGGGGAAGGCACTTGATCAATAAATGCTTAATAAggtcaggtgcggtggctcacgcctgtaatcccagcactgtgggaagctgacctgggtggatcacttgagccc----------------------------------------------------------------------aggagttggagaccagcctgagcaacatggtgaaaccccagctct s panTro4.chr19 59967944 379 + 63644993 ctggtctccaactcctgagctcaagtgatccacccaggtcggcttcccaaagtgctgggatt-acaggtgtgagccaccgtgcccagccAGTTCTGTCTTCTTTACACTGCAGTATTTTATAAATGTCCCATAACAAACACATATTTCTTTAACCATGGTGGGGAAGGCACTTGATCAATAAATGCTTAATAAggtcaggtgcggtggctcacgcctgtaatcccagcactgtgggaagccgacctgggtggatcacttgagcccaggagttggagacaagcctgagcaacatggtgaaaccccagctctaaaaacaaaacaaaannnnnnnnnnaggagttggagacaagcctgagcaacatggtgaaaccccagctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831330 309 + 59248254 ctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggatt-acaggcatgagccactgcgcctggccagttctgtcttctttACACTGCAGTATTTTATAAATGTCCCATAACTAACACATATTTATTTAACCATGGTGGGGAAGGTACTTGATCAATAAATGCTTAATAAggccgggcacagtggctcaagcctgtaatcccagcactgtgggaagccaaggcaggtggatcacttgagccc----------------------------------------------------------------------aggagtttgaaaccagcctgagcaacatggtgaaaccccagctct i macFas5.chr19 C 0 I 190 s chlSab2.chr6 47643864 309 + 50890351 ctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggatt-acaggcatgagccaccgcacccagccagttctgtcttctttacactgcaatattttataaatgtcccataactaacacatattTATTTAACCATGGTGGGTAAGGTACTTGATCAATAAATGCTTAATAAggccgggcgcagtggctgaagcctgtaatcccagcactgtgggaggccaaggcgggtggatcacttgagccc----------------------------------------------------------------------aggagtttgaaaccagcctgagcaacatgatgaaacaccagctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57714 295 + 138250 ctggtactgaactcctgacctcgagggatccaaccacctcagcctcccaaaatgctggcatt-acaagcgtgagccactgcgcccaaccAGTCCTGTCGTCTTTGCACTGCAGTATTTTATAAATGCCCCATAACAGACACTTATTTCTTTAACCATGGTGGGGAAGACACTGGATCCATAAGCACTTAATAAggccgggcgcggtggctcaagcctgtaatcccagcaatttg-------------ggtggatcagttgagccc----------------------------------------------------------------------aggagtttgagaccagcctgagcaacatagtgaaac-ccaactct i calJac3.chr22_GL285922_random I 66 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=910.000000 s hg38.chr19_GL949748v2_alt 1035660 1 + 1064304 a s panTro4.chr19 59968323 1 + 63644993 a i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831829 1 + 59248254 a i macFas5.chr19 I 190 C 0 s chlSab2.chr6 47644173 1 + 50890351 a i chlSab2.chr6 C 0 I 982 s calJac3.chr22_GL285922_random 58009 1 + 138250 a i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=1526.000000 s hg38.chr19_GL949748v2_alt 1035661 15 + 1064304 -aaaacaaaacaaaac s panTro4.chr19 59968324 15 + 63644993 -aaaacaaaacaaaac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831830 14 + 59248254 -aaaaaaaaaaaaag- i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58010 11 + 138250 caaaaaaaatt----- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=52397.000000 s hg38.chr19_GL949748v2_alt 1035676 116 + 1064304 ---aataaaacaataatta--gctgtgtgtggtggcgtatgcctgtactcccagctacttgggaggctgaagtgggaggatcccttgagcccagcaggttgagactgcagtgagccatgac s panTro4.chr19 59968339 116 + 63644993 ---aataaaacaataatta--gctgtgtgtggtggcgtatgcctgtactcccagctacttgggaggctgaagtgggaggatcccttgagcccagcaggttgagactgcactgagccatgac i panTro4.chr19 C 0 I 162 s macFas5.chr19 55831844 109 + 59248254 ---aaaaaatta---------gccagatgcggtggtgtgcttccatagccccagctactcaggagtctgaggcaggaggatcacttgagcccaagaggtcaaggctgcagggagctgtgtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47944674 101 + 51301725 ---aacaaactaattattcaggccgggcgtggtggctcacgcctgtaatcccagcactttgagaggcagaggcaggaggatcacttgaggtcaggagttcgaga----------------- i papAnu2.chr19 M 2539 C 0 s calJac3.chr22_GL285922_random 58021 112 + 138250 tttttaaaatta---------gctgtgtgtggtggcataagcctgtacacccagctacttgggaggctgaactgggaggatcacttgagcccagcaggttgagactgcagtgagccctgac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=124886.000000 s hg38.chr19_GL949748v2_alt 1035792 319 + 1064304 tgcaccactgca-ctctagcctgggtgaca----gagatggatcctgtctc--aaac-aaaCTAATTATTCAGGTAgggcacggtggctcacacctgtaatcccagcactttgggaggccaagggaagcagatcacctgaggtcaggagttcgagac-------------------------------cagcctgaccaacatggtgaaaccctgtctctacct------------aaaacacaaaaaatt--agccaggcacggtggcgggtgcctgtaatcccagctactca--------ggaggctgaagcaggagaatcatttgaaatcgggagacggaggttgcagtgaggcaagatcacaccactgcactccag s panTro4.chr19 59968617 315 + 63644993 tgcaccactgca-ctctagcctgggtgaca----gagatggatcctgtctc--aaac-aaa----TTATTCAggcagggcgtggtggctcacacctgtaatcccagcactttgggaggccgagggaagcagatcacttgaggtcaggagttcgagac-------------------------------cagcctgaccaacatggtgaaaccctgtctctacct------------aaaacacaaaaaatt--agccaggcacggtggcgggtgcctgtaatcccagctactca--------ggaggctgaagcaggagaatcatttgaaatcgggagacggaggttgcagtgaggcaagatcacaccactgcactccag i panTro4.chr19 I 162 C 0 s macFas5.chr19 55831953 315 + 59248254 tgtgccactgca-ctccagcctgggtgaca----gagacagaccctgtctc--aaaC-TAACTAATTATTCAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcagaggcaggaggatcacttgaggtcaggagttcgagat-------------------------------cagcctgaccaatgtggtgaaacc--gtctctacct--------------aaaacaaaaaatt--agccaggcatggtggcaggtgcctgtaatcccagctactca--------gggggctgaggcaggagaatcatttgaaaccaggagatggaggttgcagtgaggcaagatcacaccacagcactccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47944775 305 + 51301725 ---------------ccagcctgaccaacatggtgaaactgtctctatcta--aaacacaaaaaatta-----gccaggcatggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatcatttgaaaccaGGAGATGGCGGTTGCAGtga----------caccatggcactccagcctgggcaacacagcgagact--tcgtctgtctcaaaacaaacaaacaaaacataaagtc--agcggggtgcagtggctcacgcctgtaatcccagcactttg--------ggaggctaaggcagatggatcacctgaggtcaggagttcgaga-------------------------------ccag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58133 315 + 138250 --------tgcacctccagcctgggtgaca----gagcaagaccctgtctcaaaaac-aaaaaaTtta-----gccaggttcggtggcttctatctatagccccagctactcaggaggctgaggcaggaggatcgcttgagcccaggagatcaaggctgcagggagctgtgtctgtgccactgcactctagcctgggtgacagagacagacc------ctgcct----------caaaaaaaCTAATTATTCAgaccgggtatggtggttcatgcctgaaatcccagcacttcagcactttgggaggccaaggcaggaggaccacctgaggtcaggaatttgaga-------------------------------gtag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=143688.000000 s hg38.chr19_GL949748v2_alt 1036111 184 + 1064304 cctgggcaacagagcgagaccccatctgt-ctcaaaacaaacaaacaaaac--aaaGTCAgccgggcgcagtggcccacgcctgtaatcccagcactctgggaggctgaggcaggagaatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacgtggtgaaaccccgtctctactaaaa---atac s panTro4.chr19 59968932 184 + 63644993 cctgggcaacagagcgagaccccatctgt-ctcaaaacaaacaaacaaaac--aaaGTCAgccgggcgcagtggcccatgcctgtaatcccagcactttgggaggttgcggcaggtgaatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacgtggtgaaaccctgtctctactaaaa---atac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921218 186 + 60714840 CCTGGGCAACAGAGCAAGACTCCGTCTGT-CTCAAAACAAACAAACaaaacataaagtcagccgggcacagtggctcatgcctgtaatctcagcactttgggaagccgaggcaggtggatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacatggtgaaaccccgtctctactaaaa---atac i ponAbe2.chr19 M 668 C 0 s macFas5.chr19 55832268 185 + 59248254 cctgggcaacacagcgagacttcatctgt-ctcaaaacaaacaaacaaaacataaaGTCAgcggggtgcagtggctcacgcctgtaatcccagcactttggaaggctgaggcagatggatcacctgaagtcaggagtttgaga-------------------------------ccagcgtggctaacgtggtgaaaccccgtctctactaaaa---ata- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945080 175 + 51301725 cgtggctaacgtggtgaaaccccgtctctactaaaaataaa------------aaatttggccaggcgcagtggctcaagcctgtaatcccagcactttgggaggccgagacgggtggatgac--aaggtcaggagatagaga-------------------------------ccatcctggctaacccggtgaaaccccgtctctactaaaaaataca- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58448 195 + 138250 cctgaacaacgtggagaaaccccatctctactaaaaatacaa-----------gaaattagctaggtgtggtggcacataactgtagtcccagctactcggaaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagaacaagattccgtctc--------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=112592.000000 s hg38.chr19_GL949748v2_alt 1036295 116 + 1064304 aaaaattagcagggtatggtagcaggcatct-taatcccagctactcaggaggctgaggtccg-----cgcttgaacccaggaggcagaggttacagtgagccgagatcgcgccattgcact s panTro4.chr19 59969116 89 + 63644993 aaaaattagcagggtatggtagcaggcatct-taatcccagctactcaggaggc--------------------------------agaggttacagtgagccgagattgcgccattgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921404 116 + 60714840 aaaaattagcagggtatggtagcaggcatct-taatcccagttactcaggaggctcaggtccg-----tgcttgaacccaggaggcagaggttacagtgagccgagatggcgccgttgcact i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55832453 111 + 59248254 aaaaattagcagggtgtggtggcgggcacct-taatcccagctactcaggaggctgtg----------cgcttgaacccgggaggcagaggttccagtgagccgagatcgtgccgttgcact i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47945255 122 + 51301725 aaaaactagcccggcaaggtggcgggcgcctgtagtcccagctactcgggaggctgaggcagaagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcacgccactgcact i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47645156 111 + 50890351 aaaaattagcagggtgtggtcacaggcacct-taatcccagctactcaggaggctgtg----------cgcttgaacccaggaggcagaggttccagtgagccaagatcgtgccgttgcact i chlSab2.chr6 I 982 I 1 s calJac3.chr22_GL285922_random 58643 92 + 138250 -aaaaaTAgctgggcgcggtggctcatgcctgtaatcctagcactttgggaggccgagg---------tgggtggatc-----agcagaggt--caggagttcaagacc------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=420257.000000 s hg38.chr19_GL949748v2_alt 1036411 197 + 1064304 cagcctggccgacagagtgagactccctctc-aaaat----------------aacagta-gtaataaat--------aaataaaGtcgttgcttgcaggctgtac-aaaaaaaggcagcaactggacttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT s panTro4.chr19 59969205 197 + 63644993 cagcatggctgacagagtgagactccctctc-aaaat----------------aatagta-gtaataaat--------aaataaaGtcgttgcttgcaggctgtac-aaaaaaaggcagcaactggacttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921520 201 + 60714840 cagcctggccaacagagtgagactccctctc-aaaat----------------aataata-gtaataaat----taacaaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcaactggatttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696027 205 + 64156825 cagcctggccgacagagtgagactctgtctc-aaaaa----------------aataata-ataataaaCAAATGAATAAAtaaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTCCTCAGAGCCTAGCCCTGGGAGCCGCCTCTCCCAGT i rheMac3.chr19 M 2020 C 0 s macFas5.chr19 55832565 205 + 59248254 cagcctggccgacagagtgagactctgtctc-aaaaa----------------aataata-ataataaacaaatgaataaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTCCTCAGAGCCTAGCCCTGGGAGCCGCCTCTGCCAGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47945378 204 + 51301725 cagcctggccgacagagtgagactctgtctc--aaaa----------------aataata-ataataaataaatgaataaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctgGATTTGGCCCCTAGCCCATGGTTTGCCAAAACTCTGCTCTGAAGTTTGCTTGCTCCATTCACTCCTCAGAGCCTGGCCCTGGGAGCCGCCTCTGCCAGT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47645268 221 + 50890351 cagcctggccgacagagcgagactctgcctc-aaaaaaataaataataataataataata-ataaaaaataaatgaataaAtaaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTCCATTCACTCCTCAGAGCCTGGCCCTGGGAGCCGCCTCTCCCAGT i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 58735 205 + 138250 -agcctggccatcatggtgaaaccccatctttaaaaa----------------aaaAATACATAATAAATAaa-aaatgaaaatagtcatagcttgcaggctgtacaaaaaaaaggcagccactggatttggcccctgggccacagttcaccaaAACTAAGCTCTAAAGCTTACTCGGTTCATTCACTCCTCAGAGCCTGCCCCCGGGAGCCGCCCAT-CCAGA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M a score=257111.000000 s hg38.chr19_GL949748v2_alt 1036608 88 + 1064304 CCTCATCCCACATGGCCAGCGTT----CTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATAGACTTGAGGGAAGCCAAGTCCAGGTG s panTro4.chr19 59969402 88 + 63644993 CCTCATCCCACATGGCCAGCGTT----CTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATAGACTTGAGGGAAGCCAAGTCCAGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921721 91 + 60714840 CCTCATCCCCCATGGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATGGACTGGAGGGAAGCCAAGTCCAGGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696232 91 + 64156825 CCTCATCCCACACAGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55832770 91 + 59248254 CCTCATCCCACACGGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945582 92 + 51301725 CCTCATCCCACACGGCCAGCATTCTCCCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i papAnu2.chr19 C 0 I 226 s chlSab2.chr6 47645489 91 + 50890351 CCTCATCCTACACCGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 58940 88 + 138250 CCTCATCGCACAAGGCCAATGTT----CTCCTACCTTCACTGATCTTCGCTGCAAACTCCCTGATGGACTTGAGGGAGGCCAGGTCCAGGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20134956 92 - 122678785 CCTCGCCCCACAAGGCCAGCATCCTCCCGCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGAGAGGCCAAGTCCAGGTG i canFam3.chr1 I 2038 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M a score=423390.000000 s hg38.chr19_GL949748v2_alt 1036696 140 + 1064304 CCGGGCGTTGACATGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCcaggatgatgttgcctcctgaaaacccaggatggaaaaagatttaaattaataatccac s panTro4.chr19 59969490 140 + 63644993 CCGGGCGTTGACATGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCtcctgaaaacccaggatggaaaaagatttaaattaataatccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921812 140 + 60714840 CCGGGCGTTGACGTGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCcaggatgatgttgcctcctgaaaacccaggatggaaaaagatttaaattaataatccac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696323 140 + 64156825 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAATAATCCAC i rheMac3.chr19 C 0 I 3813 s macFas5.chr19 55832861 140 + 59248254 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAataatccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945900 140 + 51301725 CCGGGCGTTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAATAATCCac i papAnu2.chr19 I 226 C 0 s chlSab2.chr6 47645580 140 + 50890351 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAataatccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 59028 140 + 138250 CCGGGCATTCACATGGTGATTGAGGGTCTCCCGGCGGATGGCTCTGGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGACGTTGCCTCCTGAAAACCCGGGATAGAAAAAGGTTTATGTTAACAACccac i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135048 139 - 122678785 CCAGGCACTGACACGGTGATTAAGGGTTTCCCCACGAATCTCCTTTGCCGCTGCCTCACACTTCTCCATATCTCGACAGGCCAGAATGATGTTGCCTCCTGGAAGCCCGGGATAGGAAAAAA-CTAATTTTTCAATCCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M a score=6925.000000 s hg38.chr19_GL949748v2_alt 1036836 6 + 1064304 tcctgg s panTro4.chr19 59969630 6 + 63644993 tcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921952 6 + 60714840 tcctgg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55833001 6 + 59248254 gcctgg i macFas5.chr19 C 0 M 23308 s papAnu2.chr19 47946040 6 + 51301725 gcctgg i papAnu2.chr19 C 0 I 2465 s chlSab2.chr6 47645720 6 + 50890351 gcctgg i chlSab2.chr6 C 0 I 2646 s calJac3.chr22_GL285922_random 59168 6 + 138250 tcctag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135187 5 - 122678785 GCCCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e rheMac3.chr19 60696463 3813 + 64156825 I a score=43160.000000 s hg38.chr19_GL949748v2_alt 1036842 83 + 1064304 gtactgaccccagagac--atgaaaacat-------------acgtctacacaaaaacacatccaccaatgttcactgcggcattcttcacaaaagcc s panTro4.chr19 59969636 83 + 63644993 gtactgaccccagagac--atgaaaacat-------------acgtctacacaaaaacacatccaccaatgttcactgcggcattcttcacaaaagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921958 83 + 60714840 gtactgaccccagagaa--atgaaaacat-------------acgtctacacaaaaacacgtgcgccaacgttcactgcggcattcttcacaagagcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 59174 95 + 138250 atactgaccctggagaa--atgaaaacatttttacacaaaacacgtctacacaaaagcacatgcaccaatgttcgc-atggcgttcttcacagaagcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135192 85 - 122678785 GTACAGAGAACAAACACaaatgaaaacac-------------aggtctgctcaagagtgtgtacacacgagcccccagctgcgctgttcacggcagcc i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e macFas5.chr19 55833007 23308 + 59248254 M e rheMac3.chr19 60696463 3813 + 64156825 I a score=179698.000000 s hg38.chr19_GL949748v2_alt 1036925 240 + 1064304 aaaaggtagaaa-caaccaaatgcccatctgtggatgaagggacaacaa-aatgtggtccatccatagagatggaatattagacggccgtgaaaaggagtgaagcactggctcatgctacagcaaggatgaccgtcagaaacactgtgctcggggaaagaaaccagacacgaaagaccacacagcgtacaatcccatttacatgaattctatgtatatgatttcacacctatgaaacgccca s panTro4.chr19 59969719 240 + 63644993 aaaaggtagaaa-caaccaaatgtccatctgtggatgaagggacaacaa-aatgtggtccatccatagagatggaatattagacggctgtgaaaaggagtgaagcactggctcatgctacagcaaggatgaccgtcagaaacactgtgctccgggaaagaaaccagacacgaaagaccacacagcgtagaatcccatttacatgaattctatgtatatgatttcacacctatgaaatgccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922041 240 + 60714840 aaaaggtagaaa-caaccaaatgtccatctgtggatgaagggacaacaa-aatgtggtccagccacagagatggaatattagacggccgtgaaaaggagtgaagcgctggctcacgctacagcaaggatgaccgtcagaaacactgtgctcggggaaagaaaccagacacgaaagaccacacagcgtacaatcccatttacatgaaTTCTATTTATATGATTTCACACCTATGAAATGCCCA i ponAbe2.chr19 C 0 I 393 s macFas5.chr19 55856896 234 + 59248254 aaaaaaaaaaaa-caaccaaatgtctatccgtgaatgaagggctaacaa-aatgtggtccatccatagagatggaatatta----gccatgaaaaggagtgaagcactggctcacgctacagcaagaatgaccctcagaaacactgtgctcagggaaagaaaccagacacgaaagac--cacagtgtccagtcccatttacatgaatgctatgtgtatgatttcacacctatgaaatgccca i macFas5.chr19 M 23308 C 0 s calJac3.chr22_GL285922_random 59269 228 + 138250 agaaggtagaaa-----ccaatgtccatccgtgggtaaagagataacaa-ca--tggtccct-cagaggggcagaatattacacagctgtgaaaaggagtggagcactgactcaggctacagcaaggaagacc-tcagaaactc--tgctcaggaagagaaagcagacac--aaggccacgtagtggacaatcccatttacaggaattctgttcacacgatttcacgcatatgaaatgccca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135277 208 - 122678785 gaaatatggaaaccacccctgtgtccatcagctgctgagcagaaatgaacaaggtgttacatccagagc-ctggaatgctactcggccacggaatagaacaaaacactgacacatggtataacataggtggacctcataaa---tgtgctca-taaaatgtgccagtcacaaaaagatatgtggtg-----------------------------caggatttcgtgtttatgaaatacctg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=13443.000000 s hg38.chr19_GL949748v2_alt 1037165 18 + 1064304 gaataggcaaatccatag s panTro4.chr19 59969959 18 + 63644993 gaataggcaaatccatag i panTro4.chr19 C 0 C 0 s macFas5.chr19 55857130 18 + 59248254 gaataggcaaatctatag i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 59497 18 + 138250 gaataagcaaatccacag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135485 18 - 122678785 gaacaggccgatccacag i canFam3.chr1 C 0 I 1359 e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=155682.000000 s hg38.chr19_GL949748v2_alt 1037183 399 + 1064304 agaaagaaaatagattcttggttttctagggcagggggtggggagagggaattacagcttgatagtt-acagtgagc-aggtttctttctagggtaacag--atgttctaagattgattttaaagatggttgcat-------cattctgtgactatactaaacatcactgaattggtcgggcacggtggctcacacctgtaattccagcactttgggaggccaaggcaagaggatTCCCCATCCTCTCCtttttttttttttttt---agatggag--tctcactctgtcacccaggctggagtgcggtggcgcaatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacct---accacaactagctaa s panTro4.chr19 59969977 405 + 63644993 agaaagaaaatagattcttggttttctagggcagggggtggggagagggaattacagcttgatagtt-aaagtgagc-aggtttctttctagggtaaccg--atgttctaagattgattttaaagatggttgcat-------cactctgtgactatactaaacatcactgaattggtcgggcacggtggctcacacctgtaattccagcaatttgggaggccaaggcaagaggatTCCCCATCCTCTCCtttttttttttttttttttagatggag--tctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccacctcctgggttgaagcaattctcctgcctcaacctcccgagtagctgggattacaggcgcctgccaccacaactagctaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55857148 399 + 59248254 agaaagaaaatagattattggttttctagggc----tgcaggcagagggaattacagcttgatagttaaaagtgagcaaggtttctttctagggtaacagaaatgttctaagattgactttaaagatggttgcatcactctgcactctgtgactatactaaacaccatggaattCATcaggcacggtggctcacacctggaatcccagcacttggggag-----gGCATTAGGACt-----ttttttccttttttttttttttgt---agttggag--tctcactctgtcaccgaggctggagtgcagtggtgcaatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcctgccaccacacctagctaa i macFas5.chr19 C 0 I 14 s calJac3.chr22_GL285922_random 59515 374 + 138250 agaaagaaaatagattattggtttcccagggc----tgtggggagaaggaattgcagcttggtagtt-aaa---agcaacgtt-----------taacaa--atgttctagggttgatttgaaagacggctgcat-------cgc----tgactacactaaacatcaccgaactggccggacacggtggctcacacctgtcatcccagcactttgggaggctgaggcaagaggatt-----gtttttccttttttttcttg-------agacggggtctctctctctgctgtccaggctggagtgcagtggtgcgatctcggctcactgcaacctccacctccagggttcaagtgattctcctgccttagcatcctaagtagctggggttacaggtgcccaccacctcacccagctaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=353034.000000 s hg38.chr19_GL949748v2_alt 1037582 528 + 1064304 ttttttatttttttattttt--------agtagagacagcggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccaccccgcggcctcccaaagtactgggattacaaataagccacaatgcccagccTCCAAtttttt-ttgttgtggtaaaatacaaatcacttaaaatttatcatcttaacccccttttctttttgtttattattattttt---ttttttttgagtc--agtctcactctgctgccgcggctggagtgc--tggcgccatcacagctca-ttcagccttgaactcctaggctcaagtgacctgggactataggtaccacctgtgccagcatgcctggctaactctgg-------------tagagatgggggtgttgctatggtgtccaggctggtctggaacccctggcctcaagtgatcctcctgcctcagcctccaaaagtgctggaattatagatgtgagccaccgagacccgccctcttagccatttttaagtgtccagttcattggtattaaaaacatttat s panTro4.chr19 59970382 539 + 63644993 ttttttttttttttttttttttttttttagtagagacaggggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccaccccacggcctcccaaagtactggggttacaaataagccacaatgcccagccTCCAAtttttt-ttgttgtggtaaaatacaaatcacttaaaatttatcatcttaaccccctttTCTTTTTGTTTATTAttattattattttttttttgagtc--agtctcactctgctgccgcggctggagtgc--tggcgccatcatagctca-ttcagccttgaagtcctaggctcaagtgacctgggactataggtaccacctgtgccagcatgcctggctaactctgg-------------tagagatgggggtgttgctgtggtgtccaggctggtctggaacccctggcctcaagtgatcctcctgcctcagcctccaaaagtgctggaattatagacgtgagccaccgagaccagccctcttagccatttttaagtgtccagttcattggtattaaaaacatttat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60700276 515 + 64156825 tttttttttttttttttttt--------agtagagacaagggtttcaccatgttagccaagctagtcttaaacttctgacctcaggtgatccactccgcagcttcccaaagtactgggattacaaataagccacaatgcctggccTCCAA-ttttt-ttgttgtggtaaaatacaaatcacttaaaattaaccatcttaaccTCCCCCCCGCtttttt--------ttttt---ttttttttaagtcagagtctcattctgctgccctggctgg-gtgc--tggcaccatcatagctcacctcagccttgaagtcctgggctcaagtgacctgggactacaggcaccacctgtgccagcatgcctggctaattttgg-------------tagagatgtgggtcttgctacagtgtccaggctggtctggaaaccctggcctcaagtgatcctcctgccttagcctccaaaagtgctggaattatagatgtga---accaAGACCAGccctcttaaccatttttaagcgtccagttcattggtattaaaaacatt--- i rheMac3.chr19 I 3813 C 0 s macFas5.chr19 55857561 515 + 59248254 tttttttttttttttttttt--------agtagagacaagggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccactccgcagcttcccaaagtactaggattacaaataagccacaatgcctggccTCCAA-ttttt-ttgttgtggtaaaatacaaatcacttaaaattaaccatcttaaccTCCCCCCCGCtttttt--------ttttt---ttttttttaagtcagagtctcattctgctgccctggctgg-gtgc--tggcaccatcattgctcacctcagccttgaagtcctgggctcaagtgacctgggactacaggcaccacctgtgccagcatgcctggctaattttgg-------------tagagatgtgggtcttgctacagtgtccaggctggtctggaaaccctggcctcaagtgatcctcctgccttagcctccaaaagtgctggaattatagatgtga---accaAGACCAGccctcttaaccatttttaagcgtccagttcattggtattaaaaacatt--- i macFas5.chr19 I 14 C 0 s calJac3.chr22_GL285922_random 59889 494 + 138250 ----ttttttttgcatttta--------agtagagacaggggtttcaccatgttagcccagctagtctcaaactcctgacctcaggtgatcggctcctcagcctcccaaaccgcttgggttacaAATACCCGACAGCACCTAGCCTCCATTtttttgttgttgttgtaaaattacaatcacttaaaatttactgtttcaacacccccc------------------ttttc---tttcttgggagtcaaagtcaca--ctgctgctcaggttggaatgcagtggtgccatcctagctca-ttcagccttgaagtcctgggctcaagtgacctgggactacaggcacca--------------tctggctaatttgggggtggggggcgcagagagatg-gggtcttcctatgttgtccaggctggtctggaactcctggcctaaagtgattctcctgcatcagcctccaaaagtgctggaattatagatgtga-------------gccaccttacccatttttatgtatccagttcattggtactgaaaacatgcat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=95601.000000 s hg38.chr19_GL949748v2_alt 1038110 89 + 1064304 ggctgggccgggcatggtggctcacacctgtaatcccagcactttgggagaccaaggcaggtggatcacctgaggtcaggagttcaaga s panTro4.chr19 59970921 89 + 63644993 ggctgggccgggcacggtggctcacacctgtaatcccggcacttcgggagaccaaggcaggtggatcacctgaggtcaggagttcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922674 89 + 60714840 GGCTGggccgggcacggtggctcacacctgtaatcccagcactttgggagaccaaggcaggtggatcacctgaggtcaagagttcaaga i ponAbe2.chr19 I 393 C 0 s rheMac3.chr19 60700791 77 + 64156825 ------------catggtagctcacacctgtaatcccagcattttgggaggccgaggcgggtggatcacttgaggtcaggagttcaaga i rheMac3.chr19 C 0 I 35 s macFas5.chr19 55858076 77 + 59248254 ------------catggtagctcacacctgtaatcccagcattttgggaggccgaggcgggtggatcacttgaggtcaggagttcaaga i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 60383 83 + 138250 -----ggccgggcgtggtggctca-gcctgtcatcccagcactttcggaggccaaggcgggtggatcacctgaggtcgggagtttgaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=10431.000000 s hg38.chr19_GL949748v2_alt 1038199 16 + 1064304 ccagcctggccaacac s panTro4.chr19 59971010 16 + 63644993 ccagcctggccaacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922763 16 + 60714840 ccagcctggccaacac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55858153 12 + 59248254 ----cgaggccaacat i macFas5.chr19 C 0 I 23 s calJac3.chr22_GL285922_random 60466 16 + 138250 ccagcctgaccaacat i calJac3.chr22_GL285922_random C 0 I 23 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60700868 35 + 64156825 I a score=480604.000000 s hg38.chr19_GL949748v2_alt 1038215 443 + 1064304 attacaaacttagctgggtgtggtgttgcatgcctgtaatcccagctactcgggtggctgaggcaggagaattgcttgaacccgggaggcgaaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaaaaaaaaaacaataataataattcctaatgttgtgcaaccattacaaccatccatctctcaaattgtttcatcttgccaaactaaacttccgtttccattaaacag-taactccccattctcccctcccctcctgacccctggcaag-caccattccaact----tctctatgaatttaactgtaggtagctcctgtaagtggaatcataccgtatttgctcttctgtcgactggcttatttcacttcatggaatgtcctcaaggttcatctgtttcaatgccctt s panTro4.chr19 59971026 441 + 63644993 attacaaacttagctgggtgtggtgttgcacgcctgtaatcccagctactcgggtggctgaggcaggagaatcgcttgaacctgggaggcgaaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaaaaaaaaa-caataataataattcctaatgttgtgcaaccattacaaccatccatctctcaaattgtttcatcttgccaaactaaacttc-gtttccattaaacag-taactccccattctcccctcccctcctgacccctggcaag-caccattcaaact----tctctatgaacttaactgtaggtagctcctgtaagtggaatcataccgtatttgctcttctgtcaactggcttatttcacttcatggaatgtcctcaaggttcatctgtttcaatgccctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922779 441 + 60714840 aatacaaacttagctgggtgtggtgctgcatgcctgtaatcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaagaaaaa--CAGTAATAATAATTCCTAA---tgtgcaaccatgacaaccatccatctctcaaattgtttcatcttcccaaactaaacttctgtttccattaaacaa-taactcctcattct-ccctccactcccgacccctggcaag-caccattcaaacttctctctctatgaatttaactctaggtggctcctgtaagtggaatcatacagtatttgctcttctgtcgaccggcttatttcacttcgtggaatgtcctcaaggttcatctgtttcaatgccctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60700903 440 + 64156825 aatacaaaattagctgtttgtgttgccacatgcctgtagtcccagccacttgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgaggtcatgccactgcactccagcctgggcgacaagagcaaaactccctctcaaaaagaaa----cagtaataataatttctaatgttgtgcaaccatcacaaccacctgtttctcaaactgtttcatcttcccaaactaaacttctgtgcccattaaataattaactccccattctctcctcccctcccaacccctggcaagccattattcaaact----tctctatgaatttaactctaggtagctcctataagtggaatcatacagtatttgctcttctgtcgactgactgatttcacttcatagaatgtcctcaaggttcatc-gtttcaatgacctt i rheMac3.chr19 I 35 C 0 s macFas5.chr19 55858188 440 + 59248254 aatacaaaattagctggttgtggtgccacatgcctgtagtcccagccacttgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgaggtcatgccactgcactccagcctgggcgacaagagcaaaactccctctcaaaaagaaa----cagtaataataatttctaatgttgtgcaaccatcacaaccacctgtttctcaaactgtttcgtcttcccaaactaaacttctgtgcccattaaataattaactccccattctctcctcccctcccaacccctggcaagccattattcaaact----tctctatgaatttaactctaggtagctcctataagtggaatcatacagtatttgctcttctgtcgactgactgatttcacttcatagaatgtcctcaaggttcatc-gtttcaatgacctt i macFas5.chr19 I 23 C 0 s calJac3.chr22_GL285922_random 60505 417 + 138250 aatacaaaattagctgggtgtggtggtgcatgcctgtaatcccagctacttgggaagctgaggcaggagaattgcttgaacctgagaggcagaggttgcagcaagctgagatggtgccactgtaccccagcctgggcaacaagagcaaaaatccatctcaaacaaaaa----aagtcataa-------------tgtacaaccaacacgactacccgtctctagaacgttttcatcttcccaaactaaaattctgtgtctattaaacaa-taactccccattctcccctcccc-----acccctggcaag-cac----caaact----cctctatgaatttaactctaggtagctcatataagtggaatcacacagtatttgttcttctgtggaatggcttatttcacttagtgtcatgtcctcaaggtccatccatTAGAATGCCCCT i calJac3.chr22_GL285922_random I 23 I 462 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=10493.000000 s hg38.chr19_GL949748v2_alt 1038658 13 + 1064304 -ttttttgttttgc s panTro4.chr19 59971467 13 + 63644993 -ttttttgttttgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923220 13 + 60714840 -ttttttgttttgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701343 14 + 64156825 actttttgttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858628 14 + 59248254 acTttttgttttgt i macFas5.chr19 C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=13589.000000 s hg38.chr19_GL949748v2_alt 1038671 19 + 1064304 tttgttt-tgttttgttttT s panTro4.chr19 59971480 19 + 63644993 tttgttt-tgttttgttttT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923233 12 + 60714840 tttgttt--------ttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701357 19 + 64156825 tttgttt-tgctttgttttg i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55858642 19 + 59248254 tttgttt-tgctttgttttg i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47948511 20 + 51301725 ttcgtttctttttttttttt i papAnu2.chr19 I 2465 I 6 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I a score=306716.000000 s hg38.chr19_GL949748v2_alt 1038690 200 + 1064304 gagtctcactctgtcacccaggctggagtgccgtggcgccatctctgctcactgcaacccctgcctctcaggttcaagcgattctcctgcttc-agcctcccaagcagc-tgggactacaggtgcccaccacaactcctggctaa-tttttgta-tttttagtagagagggggtttcaccatgttggttaggctggtctcgaac s panTro4.chr19 59971499 200 + 63644993 gagtctcgctctgtaacccaggctggagtgcagtggcaccatctctgctcactgcaacccctacctctcaggttcaagcgattctcctgcttc-agcctcccaagtagc-tgggactacaggtgcccaccacaactcctggctaa-tttttgta-tttttagtagagagggggtttcaccatgttggttaggctggtcttgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923245 200 + 60714840 gagtctcgctctgtcacccaggctggagtgcagtggcgccatttctgctcactgcaacctctgcctctcaggttcaagcaattctcctgcttc-agcctcccaagtagc-tgggactacaggtgcccgccacaactcctggctaa-tttttgta-tttttagtagagacggggtttcaccatgttggttaggctggtctcaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701382 201 + 64156825 gagtcccgctctgttgcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcccgggttcaagcgattctcctgcctc-agtctctcgggtagcttgggattacaggcacccactacaatgcctggctaa-tttttgta-tttttagtagagatggggtttcaccacgttggttaggctggtctcgaac i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55858667 201 + 59248254 gagtcccgctctgttgcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcccgggttcaagcgattctcctgcctc-agtctctcgggtagcttgggattacaggcacccactacaatgcctggctaa-tttttgta-tttttagtagagatggggtttcaccacgttggttaggctggtctcgaac i macFas5.chr19 I 6 C 0 s papAnu2.chr19 47948537 202 + 51301725 gagtctcgctctgttgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcccgcctc-agcctcccgagtagc-tgggactgcaggcgcccgccaccgcgcccggctagttttttgtattttttagtagagacggggtttcaccgtgttagccaggatggtctcgatc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47648372 203 + 50890351 gagtttcgctctgtcgcccaagctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcgagactcccgagtagc-tgggactacaggcgcccgccacctcgcccggctagatttttgtattttttagtagagacggggtttcaccgggttagccaggatggtcttgatc i chlSab2.chr6 I 2646 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M a score=154649.000000 s hg38.chr19_GL949748v2_alt 1038890 72 + 1064304 tcctgacctcgtgatccgccagctttggcctcccaaagtactga--ttacaggcgtgcaccaccgcgcccggcc s panTro4.chr19 59971699 74 + 63644993 tcctgacctcgtgatccgccagcttcggcctcccaaagtgctgagattacaggcgtgtgccaccgcacccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923445 74 + 60714840 tcctgacctcgtgatctgcccgcctcggcctcccaaagtgctgagattacaggtgtgcgccaccacgcccggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393119 74 - 106955855 tcctgaccttgtgagccgccagcctcggcctcccaaagtgctgagattacaggcatgtgccaccgcgcccagcc i nomLeu3.chr10 M 2381 C 0 s rheMac3.chr19 60701583 74 + 64156825 tcctgacctggtgatccatccgccttagcctcccaaagtgctgggattacaggcttgagccactgcgcccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858868 74 + 59248254 tcctgacctggtgatccatccgccttagcctcccaaagtgctgggattacaggcttgagccactgcgcccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47948739 74 + 51301725 tcctgacctcaggatctgcccgtctcggcctcccgaagtgctgggattacaggtgtgagccactgcgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648575 74 + 50890351 tcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacagacttgagccaccgcgcccggcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I a score=404154.000000 s hg38.chr19_GL949748v2_alt 1038962 157 + 1064304 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaagccacattctgtttccctgttcatctgtggatgggtgcctgggttccttccacctccggactgtgaataatgctgcagtgagcatggatgtacagatatctctctgag s panTro4.chr19 59971773 155 + 63644993 agaatgcccttcctttttaaggctgaatcatatgccc--gtctatagaagccacattctgtttccctgttcatctgtggatgggtgcctgggttccttccacctctggactgtgaataatgctgcagtgagcatggatgtacagatatctctctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923519 157 + 60714840 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaggccacattctgtttccctgttcatctgtggatgggtgcctgggctccttccacctctggactgtgaataatgctgtaatgagcatggatgtgcaggtatctctctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393193 157 - 106955855 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaggccacattctgtttccctgttcatctgtggatgagtgcctgggttccttccacttctggacagtgaataatgctgcaatgagcatggatgtgcagatatctctctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60701657 155 + 64156825 --aatgcccttcgtttttaaggctgaatcatataccactgtctacagaggccacattctgtttctctgttcatctgtggatgggtgcctggcttccttccaccttcggactgtgaataacgctgcagtgagcatggatgtgcagatatctctctgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858942 155 + 59248254 --aatgcccttcgtttttaaggctgaatcatataccactgtctacagaggccacattctgtttctctgttcatctgtggatggatgcctggcttccttccacctttggactgtaaataacgctgcagtgagcatggatgtgcagatatctctctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47948813 138 + 51301725 --aatgcCCTTcgtttttaaggctgaatcatatACCACTGTCTACAGAGGCCACACTCTGTTTCTCTGTTCATCTGTGGATGGGTGCCTGGCT-----------------TGTGAATAACGCTGCAGTGAGCATGGATGTGCAAATCTCTCTCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648649 152 + 50890351 -----gcccttcgtttttaaggctgaatcgtataccactgtctacagaggccacgttctgtttctctgttcatctgtggatgggtgcctggcttccttccaccttcggactgtgaataatgctgcagtgagcgtggatgtgcagatctctctctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61384 139 + 138250 agaaTGCccttccttttgcaggctgaatcatgttccactgtctgcagactccacg-tgtgcttctctgttcatctgt-gatgggtgcctgggttgct---------ggaccgtgaatcatgct-------gcatgggtgtgcaaatatctctccgcg i calJac3.chr22_GL285922_random I 462 C 0 e canFam3.chr1 20135503 1359 - 122678785 I a score=1100946.000000 s hg38.chr19_GL949748v2_alt 1039119 348 + 1064304 AGCCAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCACCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTGGGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---CCTTGTCTGAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATCACATCACACCAAGGGACCTC-TGTCATGTTCTCCAT--------------------------------AAGTGGCT------------CCACCCAGTGT----------CTGGCGTGTGGAACGCCTTCAGCAA s panTro4.chr19 59971928 348 + 63644993 AGCCAAAGCAGGGGAGATCTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTGGGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---CCCTGTCTAAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATCACATCACACCACGGGATCTC-TGTCATGTTCTCCAT--------------------------------AAATGGCT------------CCACCCCGTGT----------CTGGTGTGTGGAACGCCTTCAGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923676 348 + 60714840 AGCCAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCCGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTCTGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---ACCTGTCTGAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATGACATCACACCACGGGATCTC-TGTCATGTTCTCCAT--------------------------------AAATGGCT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCAGCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393350 345 - 106955855 agccAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCAATGCCTGTGTTGGCGCCCGTCACAATGACCGTCTTCCCAGAGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTCTGCCCA--CTCACTCCACGTGCCCCTGACTGAATGATCTCAGGCAA---ACCTGTCTGAGCTCACTCACGTACCCCAACTGAAACAC--AGACAACATCACATCACACCATGGGATCTC-TGTCACGTTCTCCAC--------------------------------AAATGGCT------------CCACCCA-TGT----------ATGGTGTGTGGAACGCCTTCAGCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60701812 348 + 64156825 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGCAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCCCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAC--AGACGTCATCACATCACACCACGGGATCTC-CGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55859097 348 + 59248254 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGCAGCAGCATGGTCAGTCCTATCTGCCAACTCTCACTCCACATGCCCCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAT--AGACGTCATCACATCACACCACGGGATCTC-CGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i macFas5.chr19 C 0 I 302 s papAnu2.chr19 47948951 347 + 51301725 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCAGTGACATAGTCCCTGACGGTGAGAAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCGCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACGTCCCCCAACTGAAACAC--GGACATCATCACATCACACCACAGGATCTC-CGCCCTGTTCTCCAT---------------------------------GATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648801 348 + 50890351 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACACGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCCCTGACTGAGTGACCTCAGGCAA---ACCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAC--AGACATCATCACATCACACCACGGGATCTC-TGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGACCGCCTTCAGCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61523 399 + 138250 agccAAAGCAGGGGAGAGTTTACCTCTTTTCGCCAGTTCAAAGGCGGTCTGCTTCCCTATGCCCGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAACCCCACCGGCAACATTGTCCCTGAGCGCGGGAAGGGGCACAGTCAGTCCTGTCTGCCCACTCTCACCCCACGTGCCCCTGACTGAGTGATCTCTGACAA---ACCCGTATGAGCTCACTCCCGCCCCCCAACTGAAAAAC--AGATGTCATCACATCACACAGTGGGATCTC-TGTCCTGttctccacgttggtcaggctggtctcgaactcttgacctcaggtgatctgtccgccttggcctcccaaagtgctgggatcacaggtgtgagccactgcacccg--- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20136862 338 - 122678785 AGCCTCAGCAGAAAAAG---CACCTCTTCTGGCCAGCTCCAAGGCCGTCTGCTTCCCAATGCCTGTATTGGCGCCAGTCACAATGACGGTCTTCCCAGGAATGGTGGCCTTGCTGGGACAGGCCCCGCCCGCAATGTAGTCTCTGAAGATAAGAAACA--ATCATCAGTTCTGTCTGC--ACCCCCACCACACATGCCCCTG--TTAAtgatcttgagcaaatgaccccactgagcttgtgt---tcccccaaaggacagatgagaaggacatctcataactccgtgggggccagtgtgatggtacaggc--------------------------------aaa-ggct------------cagcaca--gc----------cctgTGCGAGGAGGTGCCACAACA- i canFam3.chr1 I 1359 C 0 a score=27717.000000 s hg38.chr19_GL949748v2_alt 1039467 9 + 1064304 GTGACAGTC s panTro4.chr19 59972276 9 + 63644993 GTGACAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924024 9 + 60714840 GTGACAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393695 9 - 106955855 GTGACACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702160 9 + 64156825 GTGACAGtc i rheMac3.chr19 C 0 I 304 s macFas5.chr19 55859747 9 + 59248254 gTGACAGTC i macFas5.chr19 I 302 I 1 s papAnu2.chr19 47949298 9 + 51301725 gtgacagcc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47649149 9 + 50890351 GTCACAGtc i chlSab2.chr6 C 0 I 313 s calJac3.chr22_GL285922_random 61922 9 + 138250 gTGACCATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137200 8 - 122678785 -TGACAATC i canFam3.chr1 C 0 C 0 a score=443.000000 s hg38.chr19_GL949748v2_alt 1039476 1 + 1064304 A s panTro4.chr19 59972285 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924033 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393704 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 61931 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137208 1 - 122678785 A i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47649158 313 + 50890351 I e papAnu2.chr19 47949307 1 + 51301725 I e macFas5.chr19 55859756 1 + 59248254 I e rheMac3.chr19 60702169 304 + 64156825 I a score=25641.000000 s hg38.chr19_GL949748v2_alt 1039477 7 + 1064304 TTATTTT s panTro4.chr19 59972286 7 + 63644993 TTATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924034 7 + 60714840 TTATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393705 7 - 106955855 TTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702473 7 + 64156825 TTATTTT i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55859757 7 + 59248254 TTATTTT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47949308 7 + 51301725 ttttttt i papAnu2.chr19 I 1 I 2054 s chlSab2.chr6 47649471 7 + 50890351 TTATTTT i chlSab2.chr6 I 313 C 0 s calJac3.chr22_GL285922_random 61932 7 + 138250 TTATTTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137209 7 - 122678785 TTACTTT i canFam3.chr1 C 0 C 0 a score=65777.000000 s hg38.chr19_GL949748v2_alt 1039484 25 + 1064304 ATAAATGCTCACTGCATGAGATTCC s panTro4.chr19 59972293 25 + 63644993 ATAAATGCTCACTGCATGAGATTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924041 25 + 60714840 ATAAATGCTCCCTGCATGAGATTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393712 25 - 106955855 CTAAATGCTCACTGCATGAGATTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702480 25 + 64156825 ATAAATGCCCACTGCATGAGATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55859764 25 + 59248254 ATAAATGCCCACTGCATGAGATTCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47649478 25 + 50890351 ATAAATGCCCACTGCATGAGATTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61939 25 + 138250 ATAAACACCTACTGCATGAGATTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137216 25 - 122678785 GTAAAGACCCACtgtattggtctcc i canFam3.chr1 C 0 I 1695 e papAnu2.chr19 47949315 2054 + 51301725 I a score=102493.000000 s hg38.chr19_GL949748v2_alt 1039509 52 + 1064304 Cggccaggtgagggggcttgcacctgtaatcccagcactttgggaggccaaa s panTro4.chr19 59972318 52 + 63644993 Cggccaggtgaggtggctcgcgcctgtaatcccagcactttgggaggccaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924066 52 + 60714840 Cggccaggcgaggtggctcgcgcctgtaatcccagcactttgggaggccaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393737 52 - 106955855 Cggccaggcgaggtggctcgcgcctgtaatcccagcactttgggaggccgaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702505 52 + 64156825 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaaA i rheMac3.chr19 C 0 I 3619 s macFas5.chr19 55859789 52 + 59248254 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47649503 52 + 50890351 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61964 32 + 138250 CAGCCCGGCAA--------------gtaatcccagcactttgggag------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I a score=135687.000000 s hg38.chr19_GL949748v2_alt 1039561 105 + 1064304 gttttgggggtgggggggggcgggggcggatcacttgaggtcaggagttcgagtccagcctggcaaacatggcgaga-ccccgtctctact-taaaatacaaaaaTT s panTro4.chr19 59972370 105 + 63644993 gtttggggggggggggggggcgggggtggatcacttgaggtgaggagttcgagtccagcctggcaaacatggtgaga-ccctgtctctact-aaaaatacaaaaaTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924118 96 + 60714840 gtat---------ggggtggtgggggcagatcacttgaggtcaggagttcgagtccagcctggcaaacatggcaaga-ccctgtctctact-aaaaatacaaaaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393789 97 - 106955855 gttt---------cagggggcgggggcagatcacttgaggtcaggagttcaagtccagcctggcaaacatggcgagacccccgtctctact-aaaaatacaaaaaTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55859841 95 + 59248254 -----------gtcgggggtggggggcaggtcacttgaggtcaggagttcgagtccagcctggcaaacgtggggagacccctgtctctact-aaaaatacaaaaatt i macFas5.chr19 C 0 I 308 s chlSab2.chr6 47649555 96 + 50890351 -----------gtcgggggcggggggcaggtcacttgaggtcaggagttccagtccagcctggtaaacatggggagacccctgtctctactaaaaaatacaaaaatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61996 90 + 138250 ------------tcagaggc---aggcagatcacttgaggtcaggagttcaagaccagcctggcaaacatggtgaga-cgcagtctctact-aaaaatacaaaaatt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=8120.000000 s hg38.chr19_GL949748v2_alt 1039666 6 + 1064304 AGCCAG s panTro4.chr19 59972475 6 + 63644993 AGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924214 6 + 60714840 agccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393886 6 - 106955855 AGCCAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47649651 6 + 50890351 agccag i chlSab2.chr6 C 0 I 1937 s calJac3.chr22_GL285922_random 62086 6 + 138250 ggccag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=3338.000000 s hg38.chr19_GL949748v2_alt 1039672 5 + 1064304 ATGtg s panTro4.chr19 59972481 5 + 63644993 GCGtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924220 5 + 60714840 gcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393892 5 - 106955855 GCGtg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 62092 5 + 138250 gcatg i calJac3.chr22_GL285922_random C 0 I 385 e canFam3.chr1 20137241 1695 - 122678785 I e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=234121.000000 s hg38.chr19_GL949748v2_alt 1039677 476 + 1064304 taggga----aaagagagattagactgttactgtgtctatatagaaaggaaagaca-taagagactccattttgaaaaagacctgtacttt--gaacaattgctttgctgagatgttgttaatttgtagctttgacccagccactttgacccaatctggagctcacaaaaacctgtgttgtatgaaatcaaggtttaagggatctagggctgtgcaggaagtgccttgttaac-acaatgtttccaagcagtatacttggt-aaaagtcatcgccagtctctagtctcaataaaccaggggcacgatgcactgcagaaagctgcagggacctctgcccttgaacacagagtattgtccaaggtttctccccgtgggatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcccaacacccgtaaagggtctgtgctgaggtggattggtaaaagaggaaagcctcttg s panTro4.chr19 59972486 476 + 63644993 taggga----aaagagagattagactgttactgtgtctatatagaaaggaaagaca-taagagactccattttgaaaaagacctgttcttt--gaacaattgctttgctgagatgttgttaatttgtagctttgacccagccactttgacccaatctggagctcacaaaaacctgtgttgtatgaaatcaaggtttaagggatctagggctgtgcaggacgtgccctgttaac-acaatgtttccaagcagtatacttggt-aaaagtcatcgccagtctctagtctcaataaaccaggggcacaatgcactgcggaaagccgcagggacctctgccattgaacgcggggtattgtccaaggtttctccccatgggacagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcccgacacccataaagggtctgtgctgaggtggattagtcaaagaggaaagcctcttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924225 483 + 60714840 tagggaaaagaaagagagattagactgttactgtgtctatatagaaaggaaagacattaagagactccattttgaaaaagacctgtactttgagaacaattgctttgctgagatgttgttaatttgtagctttgccccagccactttgacccaacctggagctcacaaaaacctgtgctgtatgaaatcaagttttaagggatctacggctgtgcaggacatgcctcgttaac-aaaatgtttacaagcagtatacgtggtaaaaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgcagaaagccgcagggacctctgcccttgaaagcggggtattgtccaaggtttctccccatgtgatagtctgaaatatcgcctcgtgggatgagaaagacctgaccgtcccccagccggacacccgtaaagggtctgtgctgaggtgga-tagtaaaagaggaaggcctctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393897 477 - 106955855 taggga----aaagagagatcagactgttactgtgtctatacagaaaggaaagaca-taagagactccattttgaaaaagctctgtacttt--aaacaattgcttcactgagaggttgttcatttgtagcttcgccccagccgctttgacccaacctggagctcacaaaaacacgtgctgtatggaatcaaggttgaagggatccagggctgtgcaggacgtgccttgttaacaaaaatgtttacaggcagtgtacttggt-agaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgtggaaagccgcagggacctctgccctggaaagcggggtgttgtccaaggtttctccccatgagatagtctgaaatatggcctcgtgggatgagaaagacctgaccgacccccagcccaacacccgtaaagggtctgtgctgaggaggattagtaaaagaggaaagcctcttg i nomLeu3.chr10 C 0 M 1720 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=135864.000000 s hg38.chr19_GL949748v2_alt 1040153 522 + 1064304 cagttgagagagaggaaggccactgtctcctgcctgaccctgggaactgaatgtctcggtataaaacctgattgtacatttgttcaattctgagacaggagaaaagccgccctatggcgggaggcgagacatgtttacagcaatgctgccttgttattctttactccgctgagatgtttgggtggagagaaacatcaatctggcctacgtgcacgtccaggcatagtaccttcccttgaacttaattatgtcatagattcttttgctcacatggtttttgctgac-----ctcattatcaccctgctctcctactacattcctttttgctgaaataatgaagataataatcagtaaaaactgagggaactcagaggccggtgccggtgcaggtccttggtatgctgagcgccggtcccctgggcccactgttgtttctctatactt------tgtgtcttatttcttttctcagtctctcgtcccacccaactagaaatacccacaggtgtggaggggcaggccaccccttca s panTro4.chr19 59972962 528 + 63644993 cagttgagatggaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgactgtacatttgttcaattctgagataggagaaaaaccgccctatggtgggaggcgagacatgttggcagcaatgctgccttgttattctttaccccgctgagatgtttgggtggagagaaacatcaatctggcttacgtgcacgtccaggcatagtaccttcccttgaacttaatgacatcatacattcttttgctcacatgttttttgctgac-----ctcactatcaccctgctctcctactacattcctttttgctgaaataatgaagataataatcaataaaaactgagggaactcagaggccggtgccggtgcaggtccttggtgtgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacccgactagaaatacccacaggtgtggaggggctggccaccccttca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924708 531 + 60714840 cagtcgagatagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgattgtacatttgttcaattctgagatagaagaaaaaccgccctatggtgggaggcgggacatgtttgcagcaatgctgccttgttattctttactccgctgagatgtttgggtggagagaaacataaatctggcctacgtgcacgtccaggcatattaccttcccttgaacttaattatgacatagattcttttgctcac--gttttttgctgaccttctcttattatcaccctgctctcctactacattcctttttgctgaaataatgcagataataatcaataaaaactgagggaactcagaggccggtgccggtgcaggtccttggtgtgctgagtgccagtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacccgagtagaaatacccacaggtgtggaggggcaggccaccccttca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=337190.000000 s hg38.chr19_GL949748v2_alt 1040675 696 + 1064304 caggcgtggtggtgcacacctgtaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggcggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcacgagattcccaaggctgctgtacgcattaccacagacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaacatgtctcactggaataaatcaaggtattggtagagtcaggttccttctggaggctctagggaagaatccacttccagctcctacagaccgccacattcctccactcttggccccgcctccatcttcaacctgcatcctcactggaacctctccttta--------------------tttatttatttatttacttatttatttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggctcaatctca-gctcactgtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattacaggcacatgccaccacacctggctaatttcttttgtatttttagtagagacagagttttaccacgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgccttggcct s panTro4.chr19 59973490 691 + 63644993 caggcgtggtggtgcacacctgtaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggcggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcatgagattcccatggctgctgtatgcattaccacagacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaataggtctcactggaataaatcaaggtattggtagagtcaggttccttctggaggctctagggaagaatccacttccagctcctacagaccgccacattcctccactcttggccccgcctccatc-tcaacctgcatcctcactggaacctctcc------------------------tttatttatttatttacttatttatttttgagacagagtctcgctctgtcgcccaggctggcgtgcagtggcacaatctca-gctcactgtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattacaggcacatgccaccacacctggctaatttcttttgtatttttagtagagacagagttttaccatgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgccttggcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56925239 692 + 60714840 caggcgtggtggcgcacacctgcaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggtggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcatgagattcccatggctgctgtacgcattgccacaaacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaatacgtctcactgggataaatcaaggtattggcagagtcaggttccttctggaggctctaggggagaatccacttccagatcctacagaccaccacattcctccactcttggccccgcctccatcttcaaactgcatcctcactggaaccgctcc------------------------ttTATTGATTGATTGAttt-tttttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcacgatctcatgctcatggtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattactggcacatgccaccacacctggctaatttcttttgtatttttagtagagatggagttttaccacgttggtcaggctggtctctaacgcctgaccttgtaatctgcctgccttggcct i ponAbe2.chr19 C 0 I 373 s macFas5.chr19 55860244 711 + 59248254 caggcatggtggtgcacacctgtaatc-cagctactccagggactgaggcacgagaattgcttgaacccggaaggcgggggttgcagtgagtcaaaatggcgccagcctgggcaacagggtaagacgccgtctcaaaaaaaTTTTAATTTAAATTTAAAATGCCCACtgaatgagatttccgcggctgctgtacacattaccacaaacttagtggcttaaaaccacgtaagtgcatcctcctacagttctttaggtcaagagtccaaaatacgtctcactggaataaatcaaggtattggcagagtcaggttccttctggaggctctaggggagaatccatttccagctcctacaaatcgccacattcctccactcctggccccgcctccatcttcaaaccgcataatcactggaacctctcctttatttatttttatttttttatttttatttatttatttatttattta-ttttgagacggagtctcactctgtctcccaggctggagtgcagtggcccgatctcg-actcactacaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgtccaccaccacccccggctaat---ttttgtatttttagtagagacgggatttcaccatattggccaggctggtctcgaactcctgaccttgtgatccgcccgcctcagcct i macFas5.chr19 I 308 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=9813.000000 s hg38.chr19_GL949748v2_alt 1041371 38 + 1064304 cccaaagtgctgcgattacaggcgtgagccaccacacc s panTro4.chr19 59974181 38 + 63644993 cccaaagtgctgcgattacaggcgtgagccaccacacc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55860955 38 + 59248254 cccaaagtgctgggattacaggcgcgagccaccgcgcc i macFas5.chr19 C 0 I 711 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=382.000000 s hg38.chr19_GL949748v2_alt 1041409 4 + 1064304 caac s panTro4.chr19 59974219 4 + 63644993 caac i panTro4.chr19 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55860993 711 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=20196.000000 s hg38.chr19_GL949748v2_alt 1041413 88 + 1064304 aacctctccttctatcttccatctcccctctgactgagcctcctgctccctcttataaggaccctataagactacaaggcaggaccgg s panTro4.chr19 59974223 88 + 63644993 aacctctccttctatcttccatctcccctctgactgagcctcctgctccctcttataaggaccctataagactacaAGGCTGGACTgg i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 62482 88 + 138250 aacctctccttctggcttcctcctgccctctgactgagcctcctgctccctcacataaggaccttataagactacaaagtaggccgtg i calJac3.chr22_GL285922_random I 385 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55860993 711 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=5151.000000 s hg38.chr19_GL949748v2_alt 1041501 8 + 1064304 cacagtgc s panTro4.chr19 59974311 8 + 63644993 cacagtgc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55861704 8 + 59248254 catggtgg i macFas5.chr19 I 711 C 0 s papAnu2.chr19 47951369 8 + 51301725 cacggtgg i papAnu2.chr19 I 2054 C 0 s calJac3.chr22_GL285922_random 62570 8 + 138250 cacggtgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=80183.000000 s hg38.chr19_GL949748v2_alt 1041509 69 + 1064304 ctcacacctgtaatcccagcactttgggaggccaagacaggaggatcacttgaggtcaggagttcgaga s panTro4.chr19 59974319 69 + 63644993 ttcacacctgtaatcccagcactttgggaggccaaggcgggaggatcacttgatgtgaggagttcgaga i panTro4.chr19 C 0 M 543 s ponAbe2.chr19 56926304 69 + 60714840 ctcacacctgtaatcccagcactttgggaggccaaggcggcaggatcacttgaggtcaggagttcgaga i ponAbe2.chr19 I 373 C 0 s macFas5.chr19 55861712 69 + 59248254 ctcatgcctgtaaccccagcactttgggaggccgaggtgggcagatcacctgtggtcaggagttcgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47951377 69 + 51301725 ctcatgcctgtaaccccagcactttgggaggccgagatgggcagatcacctgtggtcaggagttcaaga i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 62578 69 + 138250 ctcacacctgtaatcccagcactttgggaggccgaggtgggaggatcgcttgaggtccggagtttgaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=19547.000000 s hg38.chr19_GL949748v2_alt 1041578 57 + 1064304 ccagc--catggccaacatgctgacaccccatctctactaaaaatacaaaaatt-agcag s ponAbe2.chr19 56926373 57 + 60714840 ccagc--catggccaacatgctgacaccccatctctactgaaaatacaaaaatt-agcag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55861781 53 + 59248254 ccaacagcctgaccaacatggagaaatctcatgc------aaaatacaaaatta-gccag i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47951446 53 + 51301725 ccaacagcctgaccaacatggagaaatctcatgc------aaaatacaaaatta-gccag i papAnu2.chr19 C 0 I 6 s calJac3.chr22_GL285922_random 62647 48 + 138250 ------------ccaaaatgctgacagcccacttctcctaaaaatacaaaaattgggccg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I e panTro4.chr19 59974388 543 + 63644993 M a score=137688.000000 s hg38.chr19_GL949748v2_alt 1041635 250 + 1064304 ggcttggtggtgcacgcctgtagagtcagctactcgggaggctgaagtgggaggaccacctgagcccagggagggtgaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaaaaaaagactacatgataatcataagatccttcacttggccgggcacggtggctcacgcctgtaaccccagcactttgggaggccaagg--------tggccagatccc s panTro4.chr19 59974931 247 + 63644993 ggctcggtggtgcacgcctgtagcgtcagctactcgggaggctgaagtgggaggaccacctgagcccagggagggtgaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaaaa---gaCTACATGATAATCATAAGATCCTTCACTTggccgggcacagtggctcacgcctgcaaccccagcactttgggaggccaagg--------tggccagatccc i panTro4.chr19 M 543 C 0 s ponAbe2.chr19 56926430 245 + 60714840 ggcttggtggtgcacacctctagactcaactactcgggaggctgaggtgggaggaccacctgagccccgggaggttcaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaa-----gaCTACATGATAATCATAAGATCCTTCACTTggccgggcatggtggctcacgcctgtaaccccagcactttgggaggccaagg--------tgggcagatcac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55861840 201 + 59248254 ggcacggtggctcatgcctgtagtcccagcactttgggaggccaaggagggctgatcac--gaggtcaggaga--------------------------------tccagaccatcctggctaacacggtgaaaccctgtctctactaaaaa--------tacaaaa-----------------aattagctgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcaggaaccc i macFas5.chr19 I 6 I 43 s papAnu2.chr19 47951505 201 + 51301725 ggcacggtggctcatacctgtagtcccagcactttgggaggccaaggcgggctgatcac--gaggtcaggaga--------------------------------tccagaccatcctggctaacacgatgaaaccctgtctctactaaaaa--------tacaaaa-----------------aattagctgggcgtagtggcgggcgcctgtagtcccagccactcaggaggctgaggcagaagaatggcatgaaccc i papAnu2.chr19 I 6 I 11 s calJac3.chr22_GL285922_random 62695 194 + 138250 ggctcagtggctcacgcctgtaatcccagcactttgggaggttgaggccagtggatcacctgaggtcaggagt--------------------------------tcaggaccagcctgtccaacatggtaaggccccgtctctagtaaata--------tacaaa------------------aattagctgggcgtggtggtgggcgcctgtaatctcagttactcaagaggctgaggcaggagaattgc-------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=5297.000000 s hg38.chr19_GL949748v2_alt 1041885 20 + 1064304 ctttggtcgggagctcaaga s panTro4.chr19 59975178 20 + 63644993 ctttggtcgggagctcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926675 20 + 60714840 ctttggtcgggagctcaaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47951717 17 + 51301725 ctt--gcagtgagc-cgaga i papAnu2.chr19 I 11 I 16 s calJac3.chr22_GL285922_random 62889 20 + 138250 ttgaacccaggaggtagagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e macFas5.chr19 55862041 43 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=19996.000000 s hg38.chr19_GL949748v2_alt 1041905 45 + 1064304 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca s panTro4.chr19 59975198 45 + 63644993 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926695 45 + 60714840 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55862084 41 + 59248254 -------------------------------ccagcctgggggat-acagccagactccatctc-------aaaaaaaaa i macFas5.chr19 I 43 I 2 s papAnu2.chr19 47951750 48 + 51301725 -------------------------------ccagcctgggggac-agagcgagactccatctcaaaaaaaaaaaaaaaa i papAnu2.chr19 I 16 I 2 s calJac3.chr22_GL285922_random 62909 69 + 138250 ctgcagtgagctgagatcgcgccactgcactccagcctgggcaacaacagcaaaacttcatcta---------aaata-- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=138151.000000 s hg38.chr19_GL949748v2_alt 1041950 88 + 1064304 aaattagacaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggccggacaatcgcttgaaccc-gggaggtggag s panTro4.chr19 59975243 88 + 63644993 aaattagacaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggccggacaatcgcttgaaccc-gggaggtggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926740 88 + 60714840 aaattagacaggcgtggtggcacgtgcctgtaatcccagctactcaggaggctgaggccggacagtcgcttgaaccc-gggaggtggag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55862127 88 + 59248254 aaattagccaggcgtggtggcacatgactgtaatcccagctactcgggaggttgaggccggagaattgcttgaaccc-gggaggcggag i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47951800 88 + 51301725 aaattagccaggcgtggtggcatatgcctgtaatcccagctacttgggaagttgagggcggagaattgcttgaaccc-gggaggcggag i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47651594 88 + 50890351 aaattagccaggcatggtggcacatgcctgtaatcccagctactcgggaggttgaggctggagaattgcttgaaccc-gggaggcggag i chlSab2.chr6 I 1937 C 0 s calJac3.chr22_GL285922_random 62978 87 + 138250 --attagcagggcatagtgatacacacctgtagactcagctattcgggaggctgaggtaggaagatcacctgagcccagggaggttgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e rheMac3.chr19 60702557 3619 + 64156825 I a score=340447.000000 s hg38.chr19_GL949748v2_alt 1042038 175 + 1064304 gttgtggtgagccgaggtcgtgccattgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaa----------------------gatgcttcacttaacacatcagcgagaacctctgacacgtgaggtaatgtcgtcacaccttccgaggattaggacgtggacccctctacggagtcacg s panTro4.chr19 59975331 177 + 63644993 gttgtggtgagccgaggtcgtgccattgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaa--------------------aagaTGcttcacttaacacatcagcgagaacctctgacacgtgaggtaatgtagtcacaccttccgaggattaggacgtggacccctctacggagtcacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926828 176 + 60714840 gttgcggtgagccaaggttgtgccattgcactccagcctgggcaacaacagtgaaactttgtctcaaaaaaaaaaaa---------------------agatccttcacttaacacatcagcaagaacctctgacacgtgaggtaatgtagtcacacgttccgaggattaggacgtggacccctctacggagtcacg i ponAbe2.chr19 C 0 I 874 s nomLeu3.chr10 103396094 180 - 106955855 gttgcggtgagccaaggtcgtgccatcgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaaaaa-----------------aagatccttcacttaacacatcagcaagaacctctcacacgtgaggtaatgtagtcacacgttctgaggattaggacgtggacccctctgcggagccagg i nomLeu3.chr10 M 1720 C 0 s macFas5.chr19 55862215 174 + 59248254 tctgtggtgagccaaggtagcgccattgcgctccagcctgggcaacaagagcaaaattccgtctc-aaaaaaaaaaa----------------------gatccttcacttaacacatcagcaagaacctctgacacctgaggtaatgtagtcacaggttccgaggattaggacgtggacccctctgtggagccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47951888 173 + 51301725 tctgtggtgagccaaggtcgGGCtaccgcgctccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaaa----------------------gatccttcaCTTAACACATCAGCAAGAACCTCTGACACCTGAGGTAATGTAGTCACAGGTTCCGAGGATTAGGACGTGGACCCCTCAGTGGAGCCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47651682 172 + 50890351 tctgtggtgagccaaggtcgggctactgtgctccagcctgggcaacaagagcaaaactccttctc---aaaaaaaaa----------------------gatccttcacttaacacatcagcaagaacctctgacacctgaggtaatgtagtcacaggttccgaggattaggacgtggacccctctgtggagccatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63065 193 + 138250 actgcagtgagctgtgacagcgtgactgcattccagcctgagcgac---agagagaccctgtctcaaaaggaaaaaaaaagcctacatgataatcataaggtccttcacttaacacatcagcaagaccctctgatgctcgaggtaatgtagtcacgagtacc-aggactgggacgtggacacctctccagagccgtg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=318298.000000 s hg38.chr19_GL949748v2_alt 1042213 161 + 1064304 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGCAACAAGATAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGCCACCAGCCACAGA-----------------------------------GGCTAATTTTTAAGAAAGT s panTro4.chr19 59975508 161 + 63644993 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGAAACAAGATAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACCGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGCCACCAGCCACTGA-----------------------------------GGCTACTTTTTAAGAAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56927878 161 + 60714840 actctgcccaccacaCCCATGTCCCACAGAGGCTAACACTGGAAACAAGGCAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGCGGCCACCAGCCACTGA-----------------------------------GGCTAATTTTTAATAAAGT i ponAbe2.chr19 I 874 C 0 s nomLeu3.chr10 103396274 160 - 106955855 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGAAACAAGACAGTGTCCAGCAACAGGAGACTGGGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGTCACCAGCCACTGA-----------------------------------GGCTAATTTTTAAGAAAG- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862389 169 + 59248254 actctgcccaccacaCCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCAGTCTCCAGCAACAGGAGGCTGAGCAGGTTA-ACAGCACTGCACCCACAGGACAGAAGGGCACCATGCAATACAGTGTCCACCAGCCACTAATTTTTTAAGTAAAAAA---------------------------TTTAAGTAAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952061 178 + 51301725 ACTCTGCCCACCACACCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCA---TCCAGCaacaggaggctgagcaggtaACACAGCACTGCACCCACAGGACAGAAGGGCACCATGCAATACAGTGTCCACCAGCCactaattttttaagtaaaaaaaattagttt----------------tttttaagtaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47651854 196 + 50890351 actctgcccaccacaCCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCAGTTTCCAGCAACAGGAGGCTGAGCAGGTAC-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGTCCACCAGCCACTAATTTTTTAAGTAAAAAAAATTAGTTTTACTTAAAAAAACTAATTTTTAAGTAAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63258 158 + 138250 actctgcccaccacaCCCATGTCCCACGGAGGCTAATGCTGGAAATAC-ACAATATCCAGCAACAGGGGGCTGAGCAGATCA-GCAGCACAG--CCCACAGGAGACACAAACTGCAGGACACACAGTGGCCACCCGCCACTGA-----------------------------------GGCTTATTTTTAAATAAGT i calJac3.chr22_GL285922_random C 0 I 134 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=11919.000000 s hg38.chr19_GL949748v2_alt 1042374 7 + 1064304 TTAAATT s panTro4.chr19 59975669 7 + 63644993 TTAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928039 7 + 60714840 TTAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103396434 6 - 106955855 -TAAACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862558 7 + 59248254 TTAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952239 7 + 51301725 ttaAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47652050 7 + 50890351 TTAAATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 63416 134 + 138250 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=653960.000000 s hg38.chr19_GL949748v2_alt 1042381 319 + 1064304 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcacttt-ggaggccgaggcaggcggatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----gcgaaaaatacaaaaattagccgggcgtggtggcgcacgtgtgatctcagctcctggggacgccaaggtgggaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccactgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA s panTro4.chr19 59975676 319 + 63644993 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcacttt-ggaggccgaggcaggcggatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----acgaaaaatacagaaattagccgggcgtggtggcgcacctgtgatctcagctcctggggacgccaaggtgggaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccactgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928046 320 + 60714840 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcactctgggaggccgaggcgggcgaatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaatacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctaaggtgggaggatcacctgagcccaggaggtcaaggctacagtgagccaagatcgcgccaccgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103396440 319 - 106955855 AAGTAggctgggcgaagtggctcacacctgtaatcccagcactctgggaggccgaggcgggcggatc------acccgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaatacaaaaattagccgggcgtagtggcgcgcctgtggtctcagctcctggggacgctaaggtgagaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccaccgcactccagcctgggtgacagggccagattctgccttt-aaaaat-aacgaacaaataaataatacaaaACAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862565 317 + 59248254 AAGAAggccgggcgaggtggctcacgtctgtaatccctgcactttgcgaggccaaggcgtgcggatc------acctgagg----cgcaggtgtttgagaccag---------------------cctggccaacatggcaaaaaccctgtctct-----cctaaaaaaacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctcaggtaggaggatcacctgagcccaggaggacaaggctgcagtgagccaagagcgcgccactgcactccaggctgggcgccagagccagatgctgccttt-aaaaataaacgaacaaataaataaT-----ACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952246 319 + 51301725 AAgaaggccgggcgaggtggctcacgtctgtaatccctgcactttgggaggccgaggcgggcggatc------acctgagg----cgcaggtgtttgagacaag---------------------cctggcaaacatggc-aaaaccccgtctct--aaaaaaaaaaaaacaaaaattagccgggcgtggtggcgcacctgtagtctcagctcctggGGActctcaggtgggaggatcacctgagcccaggaggttaaggctgcagtgagccacgagcgcgccactgcactccaggctgggcaacagagccagattctgccttt-aaaaataaacgaacaaataaataat-----acaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47652057 317 + 50890351 AAGAAggccgggcgaggtagctcacgtctgtaatccctgcactttgggaggccgaggcgggcggatc------acctgagg----ggcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaaaacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctcaggtgggaggatcacctgagcccaggaggacaaggctgcagtgagccaagagcgcgccactgcactccaggctgggcgccagagccagattctgcctttaaaaaataaacgaacaaataaataaT-----ACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63550 341 + 138250 aaattagccaggcgtcgtggcagaggcctgtagtcccagctattcaggagaatgaggcagaaaaaccgatttaacctgggagggtcggaggttgcagtgaccggagatcgtgccactgcactccacctgggtgacagaac-aagactccgtctcaaaaaaaaaaaaaaaaaaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctaaggtgggaggatcacctgaatccaggtgggcaaagct-------gccgagaccgcgccactgcactccagcctgggtgacagagccagattctgcctct-aaaactaaatgaacaaataaataat--------- i calJac3.chr22_GL285922_random I 134 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=1074976.000000 s hg38.chr19_GL949748v2_alt 1042700 453 + 1064304 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCACTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCTGGGGGCCCGCCTTGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGGACAGGCGTCAGGCGTCAGGGGTCGGCGCGGAGCTTGCTGCACACCAGCCGCCTGGGTAGCTCCGAGGAAGAGCGCGCGACGCAGCCACAGGCGAGCGGAGGCGCAGGCGCGGCTGGGCCCGCG s panTro4.chr19 59975995 446 + 63644993 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCACTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCTGGGGGCCCGCCTTGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGGACAGGCGTCAGG-------GGTCGGCACGGACCTTGCTGCACACCAGCCGCCTGGGTACCTCGGAGGAAGAGCGCGCGACGCAGCCACACACGAGCGGAGGCGCAGGCGCGGCTGGGCCCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928366 446 + 60714840 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCTGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGTAGGCACTGCGGGTCGGGAGCTACGAGGCCTCGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCTCCTGCTCTGGGGGCCCGCCAGGACGACGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTACCGGCTCATGCCGGGACGGGGACAGGGGTCAGG-------GGTCGGCGCGGAGCTTGCTGCACACCAGCCACCTGGGCAGCTCGGAGGAAGAGCGCGCGACGCAAACACACACGAGCCGAGGCGCAGGCGCCGCTGGGACCGCG i ponAbe2.chr19 C 0 I 3 s nomLeu3.chr10 103396759 446 - 106955855 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACGTTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGTCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCCCTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCGGGGGGCCCGCCTTGACCGCACACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCGAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCCGGCCGGGGACAGGGGTCAGG-------GGTCGGCGCGGAGCTTGCGGCACACCAGCCGCCTCTGCAGCTCCGAGTAAGAGCGCGCGGCGCAGCCACGCACGAgcggaggcgcaggcgcggctgggcccgcg i nomLeu3.chr10 C 0 I 3 s macFas5.chr19 55862882 446 + 59248254 TAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCTGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTTGGGGCGGACACTGCCGGTCGGGAGCTGCGGGGGCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGTCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTAGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGTTCATGCCGGGCCGGGGACAGGGGTCGGG-------GGTCGAAGCGGAGCTGGTTGCACACCAGCCGCCCCGACCCCTCGGAGGAAGAGCGCGCGGCGCAGCTATCCAcgtgcggaggcgcaggcgcggcggggcccgcg i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47952565 446 + 51301725 taaaataaagagttt-aaaaGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTTGGGGCGGACACTGCCGGTCGGGAGCTGCGGGGGCCGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTTGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGCACACGGGTCGGG-------GGTCGAAGCGGAGCTGGCTGCACACCAGCCGCCCCGGCCCCTCGGAGGAAGAGCGCGCGGCGCAGCCACCCACGTGCGGAggcgcaggcgcggcggggcccgcg i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47652374 446 + 50890351 TAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCGGGGCTGACACTGCCGGTCGGGAGCTGCGGGGGCTGGACCCGGGA--GCGA-----GGGGCGGGGGTCTCCGCCGTCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTTGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCACCAGGTAGCGGTTCATGCCGGGCCGGGGACAGGGGTCGGG-------GGTCGAAGCGGAGCTGGCTGCACACCAGCCGCCCCGGCCCCTCAGAGGAAGAGCTCGCGGCGCAGCCACCCACGTGCGGAGGCGCAGGCGCGGCGGGGCCCCCG i chlSab2.chr6 C 0 I 3 s calJac3.chr22_GL285922_random 63891 438 + 138250 ------aaaGAGTTTAAAAAGTCTGAAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGCGCC-GTGACCCGGCCGGCCCGA---GCGCAGGTTTGTCCCATTCC-CGCAGGCAGCGCGGGTCGGGAGCTGCAGAAGCTGCACCTGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCTGCCCCTGCGCTGGGGGCCCGCCGCGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGCCGCCTACGACGGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGTTCATGCCGGGCCCGGGACGGGGGTCAGT-------GGTCAGCGCGGAGCCGACTTCAGACCCGCCGCCCGGGCAGCTCCG-GGAAGAACGCGAGACGCAGCCAAGCACAAGGGGAAGCGCAGGCGCAGTGGGGCCCACG i calJac3.chr22_GL285922_random C 0 I 3 s canFam3.chr1 20138936 394 - 122678785 CACACTGACAAGCGC-GGAAGTCTGGACCAGCAG----ACTTGCAAGGGCCCGGGCCCGCCCCTGCCCTCGGGGTGACCTTGGGCC-GTGACCTGCCCTCTCGGCCCTTCCTAGGTGTGCCCCCCAC-----------------------GCTGCCTGGACCAGCCCTAGGCTGGCGACCACCGGGGC-GGCCTCTCTCCCGCCCTCC--GCCCACCTgccgggggccagcc-cgcccgccggcgcg---------cgcACTCACCGGAGCAGCACGGCGCCACCCACCGCCGTGCCGAGCACAGACAGCGGTAGGAGGTAGCGGTTCATGCCGGG-------CAGGAGCGGGG-------GTCCGACGCCGAGCCCACCGGAGACCTGCCGCCT-GGTCGCTCCGAG---GAGCTCACGGC-CGGCTTCCCACGTGGGGAAGGACCAGCTCTGC---------- i canFam3.chr1 I 1695 C 0 e rheMac3.chr19 60702557 3619 + 64156825 I a score=1487818.000000 s hg38.chr19_GL949748v2_alt 1043153 477 + 1064304 TCCGGAACTGGGCT---GCGAGGGGCGGGGCGCGGGCGG-AGGGGGCGGGGATCCTAGGGACGGGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGATTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTA-GT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCAGCGTATAAGGCGCTACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggagataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctgggt s panTro4.chr19 59976441 475 + 63644993 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCTAGGGACGGGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGCGT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCTACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctgtgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctg--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928815 478 + 60714840 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCCAGGGGCGAGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGAGT-CCGGGGGCGGA-----------GCCTATGGCTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCGACGCAGTT----CTGGGGT-GAAAtaggttcgaatcccat--cactgtcaattccagactgagaccctctgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGtgggtacccaagctcctagggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctgggt i ponAbe2.chr19 I 3 C 0 s nomLeu3.chr10 103397208 475 - 106955855 tccggaactgggct---gcgaggggcggggcgcgggccg-agggggcggggatcccgggggcgggACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGCGT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCGACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaactatatcagcctattctctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaATTTCCATGCCCAGAAACAAGGATTTAGTAGTCTGtgggtacctaagctcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggccgggagtatggacttctg--- i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 60706176 513 + 64156825 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCCAGGGGCCGGACCTATGAGCA-CGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGTAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTCTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGTCACAgct----ctggcgt-gaaacaggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCctgcgggtacccaagctcctggggtcctgcgggagaaggcagccaggggcctggactcctgggtccgagggaggaggggccgggggcatggactcctgggtccaaggaggaggggctaggggcctggactcctgggt i rheMac3.chr19 I 3619 C 0 s macFas5.chr19 55863331 477 + 59248254 tccggaactgggct---gcgaggggcggggcgcgggcgg-agggggcgggGATCCCAGGGGCCGGACCTATGAGCA-CGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGTAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTCTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGTCACAgct----ctggcgt-gaaacaggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGGACCCAAGCTcctggggtcctgcaggagaaggcagctgggggcctggactcctgggtccgag------------------------------------ggaggaggggctaggggcctggactcctgggt i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47953014 477 + 51301725 tccggaactgggct---gcgaggggcgggccgcgggcgg-agggggcggggatcccaggggcgggACCTATGAGCA-TGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGGAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTGTTGGGATGACGTCATACTTGCCGCGCCATGTAAGGCGCGACACAGCT----CTGGCGT-GAAACAGGTTCGAATCCCAC--CACTGTCAATTCCAGACTGTGACCCTCTGTGTGTCTTTCAAATATATCAGCCTATTCCTTCATCTGGAAATGTGTGTT---------TACCTTCTTCATAGGCTTTTGGGGATAATTTGAGAATTTCCATGCACAGAAACAAGGATCTAGTAGCCTGCGGGTACCCAAGCTCCTGGGGTCCTGCGGGAGAAGGcagctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctcggggcctggactcctgggt i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47652823 445 + 50890351 TCCGGAACTGGGCT---GCGAGGGGCGGGGCGCGGGCGG-AGGGGGCGGGGATCCCAGGGGCGGGACCTATGAGCA-CAGTCCTGAGCTCTGTCACAGCTGGGAGAGGTGGTTTCAGGAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTGTGTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGAcacagct----ctggcgt-gaaacgggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttctggggataatatgagaATTTCCACGCACAGAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcgggagaaggcagctgggggcctggactcctgggtccaaa-------------------------------------------------------------------- i chlSab2.chr6 I 3 C 0 s calJac3.chr22_GL285922_random 64332 462 + 138250 TCCGGAAGTGGGCT---GCGAGGGGCGTGGCAAGGGCAG-AGTGGGCGGGGATCCCAAGGGCGAGACCTATGAGCATCGGCCCTGAGCGCAGTCACAGCTGGGAGTGGCGGTTTCAGGAGCATGTGGGCGTGGCCGTGT-CCGAGGGCGGG-----------GCCTACGGTTCGCTCGAACGGCGTCACATTTGCCGCACCGTTTAAGGCGCTCCGCAgct----ctgtagt-gacagaggttcgaatcccac--cactgttaattccagactgcgaccctctgtgtgtctttcaaatatgtcagcctatttcttcatctggaaatgtgtgct---------taccttcttcatagacttttggggataattTGGGAATCTCCATGCTCAGAAACAAGGATCTGGTAGCCTGTGGGTACCCAAGCTTCTgg---------------ggcagctcggatcctggactcct-tgtctgag------------------------------------ggagttgaggactggggcctggactcctgagt i calJac3.chr22_GL285922_random I 3 C 0 s canFam3.chr1 20139330 480 - 122678785 TCCGGGCGGAGGCTTCCGAGAGGGGCGGGGCGTGGACTGCCGGGAGCGGG--------------GGCCCACGAggg-cgggcctcggcgccgcggcggccgggccTGG-GATTTCCGTGGCC-GTGGGCGGGGCCGCGCGCTGGAGGCGGGGCAGGGGCCGAGCCTGCGCACTGTTCCAATGACGTCACGTT---CACGCCGCTCCCGGCGTTCGGCAGGTGCGCCTGGGTTAGAGACCTGCTCCGCCGCCACCGCGCTGCGGCTGGCAGGCTGCGCTCCTCTGCGCG--TTTCAGATTTATCAGCCTGTTCCCACCT---GACGTGCGTGCTCGCCAGTAGTACCTTCCTCGTGGACTACAGGAG--AACTTGAGAATTTCGACACTCGGAAGCCAGGACCTAGTGGCCTCGGGATTCCCAAACTCCTGGGGGCCTGAAGGA---GGAAATCAGGGCGTTAGACTCCTGGGTCTGAG------------------------------------GGAGGAGGGCCTGGGGGCCTGGACTCCtggat i canFam3.chr1 C 0 I 2211 a score=419472.000000 s hg38.chr19_GL949748v2_alt 1043630 187 + 1064304 ccaagggaggaggggctgggagcatggacttctgggtccgagggaggag-ggccgggtgcctggactgctgagtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGCCCTGCACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT s panTro4.chr19 59976916 117 + 63644993 -----------------------------------------------------------------------agtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGGCCTGCACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929293 187 + 60714840 ccaagggaggaggggccaggagcatggacttctgggtccgagggaggag-gggcgggtgcctggactcctgagtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGGCCTTTACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397683 153 - 106955855 ----------------------------------ggtccgacagatgag-gggtgggtgcctggactcctgagtcttagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTATGGGCCTGCACACAGATATCTTCTGTGAACTCTGCCTGAACTACCTTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706689 186 + 64156825 ccaagggaggaggggccgggggcatggacttctaggtcccagggaggag-ggacaagtgcctggactcctgactcagagggaggaggggctggtggcct-ATTCATTTCCAAATTCTCAGAATCTCATCCCCATGTCTGGCTCTGCACAGAGATCTCTCCCCTGAACTCTGCCGGAACTACCTTTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863808 186 + 59248254 ccaagggaggaggggccgggagcatggacttctaggtcccagggaggag-ggacaagtgcctggactcctgactcagagggaggaggggctggtggcct-ATTCATTTCCAAATTCTCAGAATCTCATCCCCATGTCTGGCTCTGCACAGAGATCTCTCCCCTGAACTCTGCCGGAACTACCTTTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953491 187 + 51301725 ccaAGGGAGGAGGGGCCGGGGACATGGACTTCTAGGTCCCAGGGAGGAG-GGACAGGGGCCTGGACTCCtaggtctgagggaggaggggctggtggCCTGATTGATTTCCAAATTCTCAGAATCTCATCCCTATGTCTGGCTCTGCACAGAGATGCCTTCCCTGAACTCTGCCGGAACTACCTTTCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47653268 182 + 50890351 -----ggaggaggggccgggggcatggacttctaggtcccagggagaag-ggacaggggcctggactcctgggtctgagggaggaggggctggtggcctgATTGATTTCCAAATTCTCAGAATCTCATCCCTATGTCTGGCTCTGCACAGAGATATCTTCCCTGAACTCTGCCGGAACTACCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 64794 187 + 138250 ctgaaggaagaggagctgaggtcctggacttctgggtccaagggaggagaggccaggtgtcaggactcctgggcctgagggaggagaggctgagggcccgATTCATTCCCACATTCTCAGAATCTCATCCCAATGTCTGAGCCTGTACAGAGACGTCTTCC-TGAACTCTGCCTAAACtttttttttt i calJac3.chr22_GL285922_random C 0 I 306 e canFam3.chr1 20139810 2211 - 122678785 I a score=10444.000000 s hg38.chr19_GL949748v2_alt 1043817 4 + 1064304 AGAT s panTro4.chr19 59977033 4 + 63644993 AGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929480 4 + 60714840 AGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397836 4 - 106955855 AGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706875 4 + 64156825 AGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863994 4 + 59248254 AGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953678 4 + 51301725 AGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47653450 4 + 50890351 AGAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 64981 306 + 138250 I a score=826360.000000 s hg38.chr19_GL949748v2_alt 1043821 290 + 1064304 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCGAGTGTATCTGATCACCACCTCCTACCCCTGACTGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACCCAA-----TCTAACTAGGAGTAAGTTTTCTTCCTCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTATACAGGCAGGAAGAGCTATTTT s panTro4.chr19 59977037 290 + 63644993 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGTGAGCGTATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACCCAA-----TCTAACTAGGAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTATACAGGCAGAAGCAGCTATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929484 295 + 60714840 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTAGTCA---CCCCCACCAAACCGAGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCCAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GTTGGAAACAGGGAAGAATTCAACCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGCAGATTACACAGGCAGGAAGAGCTATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397840 281 - 106955855 TGAGTATTGCACACACTCCTGCACTCACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCGAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACTTAG--------------GAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTACACAGGCAGGAAGAGCTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706879 295 + 64156825 TGAGTATTGCAGACACTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATTACCACCTCCTACCCCTGACAGTGCCTGAGACTCCATGAGCAGACACT-GCTGGGAACAGGGAAGAATTCAATCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCGCATCAGATGAACTGTCATCTTCTTATATGAGTCCTGCCATAATGGAGATTACACAGACAGGAAGAGCTATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863998 295 + 59248254 TGAGTATTGCAGACACTCCTACACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATTACCACCTCCTACCCCTGACAGTGCCTGAGACTCCATGAGCAGACACT-GCTGGGAACAGGGAAGAATTCAATCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCATATCAGATGAACTGTCATCTTCTTATATGAGTCCTGCCATAATGGAGATTACACAGACAGGAAGAGCTATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953682 274 + 51301725 TGAGTATTGCAGACAGTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGAATG-------------CTGCTTCCCCTTGCACTGCTCAGA--GAGCATATCTGAT---CACCTCCTACCCCTGACAGTGCCTGAGACTCCAGAAGCAGACACCGGCTGGGAACAGGGAAGAATTCAATCCAAGTCACT----CTAGGAGTAAGTTTTCTTCCGCATCAGATGAACTGTCATCTTCTTATGTGAGTCCCGCCATAATGGAGATTACACAGACAGgaagagctatttt i papAnu2.chr19 C 0 I 954 s chlSab2.chr6 47653454 294 + 50890351 TGAGTATTGCAGACACTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATACACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGACTCCAGGAGGAGACACC-GCTGGGAACAGGGAAGAATTCAA-CCAAGTCACTCTAACTAGGAGAAAGTTTTCTTCCGCATCAGATGAAGTGTCATCTTCTTATGAGAGTCCTGCCATAATGGAGATTACACAGGCAGGAAGAGCTATTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65287 296 + 138250 TGAGTATCGCAGACACTCCCGCACTTACCTGTCCATGTTTGTTACCCCCCCCCCCAAACCGGGATGCACCTCTGGGCACCTGCTTTCCCTTGCACTGCTCAGAGCAAGCATATTTGATCACCACCTCCTACCCCTGACAGTGTCTGAGGCCCCAGAAGCAGATGCC-GCTGGAAAC--GGAAGAATTCGACCCAAGTCGCTCTGACCAGGAGTAAGTTTTCTTCCCCCTCATATGAACTGTCATCTTCTTACAGGAGTCCTGCCATAATGGAGATTACTCAGGCAGAAAGAGCTATTTT i calJac3.chr22_GL285922_random I 306 C 0 e canFam3.chr1 20139810 2211 - 122678785 I a score=31836.000000 s hg38.chr19_GL949748v2_alt 1044111 12 + 1064304 AAGACCTTAGTC s panTro4.chr19 59977327 12 + 63644993 AAGACCTTAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929779 12 + 60714840 AAGACCTTAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398121 12 - 106955855 AAGACCTTAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60707174 12 + 64156825 AAGACCTTAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864293 12 + 59248254 AAGACCTTAGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47653748 12 + 50890351 AAGACCTTAGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65583 12 + 138250 AAGACCTTAGTC i calJac3.chr22_GL285922_random C 0 I 195 e canFam3.chr1 20139810 2211 - 122678785 I e papAnu2.chr19 47953956 954 + 51301725 I a score=238373.000000 s hg38.chr19_GL949748v2_alt 1044123 147 + 1064304 AATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagattgataccagcctggccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagctggatgtg s panTro4.chr19 59977339 147 + 63644993 CATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagatcgataccagcctggccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagctggatgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929791 147 + 60714840 CATggccgggcatggtggctcacacctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagatcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac--aaaaattagctggatgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398133 137 - 106955855 CATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggaggatcacgaggtcaggagatcgagac------------cacagtgaaaccccgtctctactaaaaatacaaaaaaattagccgggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60707186 147 + 64156825 CATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtggaggtggacggatcacgaggtcaggagatcgagaccatcctagccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagccggttgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864305 147 + 59248254 CATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtggaggtggacggatcacgaggtcaggagatcgagaccatcctagccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagccggttgtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47653760 145 + 50890351 CATggccggatatggtggttcacacctgtaatcgcagcac-ttgggaggcggaggtggacggatcacgaggtcaggagattgagaccat-ctggccaacatggtgaaaccctgtctttactaaatatac--aaaaattagccggttgtg i chlSab2.chr6 C 0 I 316 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e papAnu2.chr19 47953956 954 + 51301725 I a score=214506.000000 s hg38.chr19_GL949748v2_alt 1044270 146 + 1064304 gtggcactcacctgtagtcccagctactcag-gaggccgaagcaggagcatcacttgaactcgggaggtggaggttgcagtgagccgagattgccctactgcattccagcct-ggcgacagagtgaaattctgtcaaaaaa--------------------------aa-----aaaaa--------------------------------------- s panTro4.chr19 59977486 146 + 63644993 gtggcactcacctgtagtcccagctactcag-gaggctgaagcaggagcatcacttgaactcgggaggtggaggttgcagtgagccgagattgccctactgcattccagcct-ggcgacagagtgaaattctgtcaaaaaa--------------------------aa-----aaaaa--------------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929938 172 + 60714840 gtggtgctcacctgtagtcccagctactcag-gaggctgaagcaggagaatcacttgaactcacgaggtggaggttgcagtgagctgagattgccctactgcattccagcct-ggcgacagagtgaaattgtgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAA-----AAAAA--------------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398270 148 - 106955855 gtggcgggcacctgtggtcccagctactcggagaggctgaggcaggagaatggcgggaacccaggaggcggagcttgcagtgagccgagattgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaa--------------------------aa-----ataaa--------------------------------------- i nomLeu3.chr10 C 0 I 25 s rheMac3.chr19 60707333 169 + 64156825 gtggcgctcccctgtagtccccgctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcaggggttgaagtgagccgagatcgccctactgcattccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aa-----aaaaaagacaa----aa------------aaacaaaaCAAAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864452 173 + 59248254 gtgacgctcacctgtagtcccagctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatcgccctactgcattccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aa-----aaaaaaaaaaaagacaa------------aaaaaaaaaaaaaCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47654221 190 + 50890351 gtggcgctcacctgtagtcccagctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatcgccctactgcgttccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aaaacccaaaaaaaacaaacacaaacaaaaacaaacaaacaaaaaaaaaca i chlSab2.chr6 I 316 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e papAnu2.chr19 47953956 954 + 51301725 I a score=54224.000000 s hg38.chr19_GL949748v2_alt 1044416 40 + 1064304 CCTTAGGCCTGTAGACCTTAAGCTCTCACCATCTCAAACG s panTro4.chr19 59977632 40 + 63644993 CCTTAGGCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i panTro4.chr19 C 0 I 760 s ponAbe2.chr19 56930110 40 + 60714840 CCTTAGTCCTGtaaaccttaagctctcaccatctcaaatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60707502 40 + 64156825 CCTTAGTCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864625 40 + 59248254 CCTTAGTCCTGTAGACCTTAAGCTCTcaccatctcaaacg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47654411 40 + 50890351 cCTTAGTCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I a score=32439.000000 s hg38.chr19_GL949748v2_alt 1044456 36 + 1064304 TATtaaaccagttacacaatgccaaatgctgtataa s ponAbe2.chr19 56930150 36 + 60714840 tattaaaccagttacacaatgccaaatgctgtataa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60707542 36 + 64156825 TATTAAACCAGTTACACAATGACAAATGCTGTATAA i rheMac3.chr19 C 0 I 669 s macFas5.chr19 55864665 36 + 59248254 tattaaaccagttacacaatgacaaatgctgtataa i macFas5.chr19 C 0 I 12 s chlSab2.chr6 47654451 36 + 50890351 TATtaaaccagttacacaatgacaaatgctgtataa i chlSab2.chr6 C 0 I 12 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I e panTro4.chr19 59977672 760 + 63644993 I a score=44231.000000 s hg38.chr19_GL949748v2_alt 1044492 91 + 1064304 gaggcacttggaggagtcaaattcatagagacagaaaac-agagtggtggctgcagggggctg---gagatgagattgggaagtcacaggatttg s ponAbe2.chr19 56930186 95 + 60714840 aaggcacttggagaactcaaattcatagagacagaaaacaaaagtggtggctgcaaggggctgcaagagatgagatggggaagtcacaggatttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864713 95 + 59248254 gaggcacttggaggagtcaaattcatagagacagaaaataagagtggtggctgccaggggctggaggagatgagattgggaagtCGCAGGATTTG i macFas5.chr19 I 12 C 0 s chlSab2.chr6 47654499 94 + 50890351 gaggcacttggaggagtcaaattcatagagacagaaaat-agagtggtggctgccaggggttggaagagatgagattgggaagtcaCAGGATTTG i chlSab2.chr6 I 12 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=2730.000000 s hg38.chr19_GL949748v2_alt 1044583 5 + 1064304 ttttt s ponAbe2.chr19 56930281 5 + 60714840 ttttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47954910 5 + 51301725 ttttt i papAnu2.chr19 I 954 C 0 s chlSab2.chr6 47654593 5 + 50890351 TTTtt i chlSab2.chr6 C 0 I 694 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e macFas5.chr19 55864808 0 + 59248254 C e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=3678.000000 s hg38.chr19_GL949748v2_alt 1044588 18 + 1064304 g-tttgtttgtttgttttg s ponAbe2.chr19 56930286 17 + 60714840 --tgttttgttttgttttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864808 17 + 59248254 --tttcttgttttgttttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954915 19 + 51301725 gtttgtttgttttttgttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e chlSab2.chr6 47654598 694 + 50890351 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=4730.000000 s hg38.chr19_GL949748v2_alt 1044606 6 + 1064304 ttttgt s ponAbe2.chr19 56930303 6 + 60714840 ttttgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864825 6 + 59248254 ttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954934 6 + 51301725 gtttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655292 6 + 50890351 ttttgt i chlSab2.chr6 I 694 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=222802.000000 s hg38.chr19_GL949748v2_alt 1044612 219 + 1064304 tttttgagagac--agtctcactgtgtcacccaggctggagagcagtgg-gcgatctcagctcactgcaacctctgcctcctaggttcaagcgattctcctgcctcagcctcccgagtagctggggctacaggcacgtgtcaccacacccggctaa-tttttgta-tttttagtagagacggggtttcaccatgttggccaggttggtctcaaactcctgacct s panTro4.chr19 59978432 220 + 63644993 tttttgagacgc--agtcttactctgtcgcccaggctggagcgcagtggcgtgatcttggctcacctcaacctctgcctcccgaattcaagcctttctcctgcctcagcctcccgagttgctgggattacaggtgcccgccaccaagcccaggtaa-tgtttgta-tttttagtagagacgaggtttcaccatgttggccaggctggtctccagctcctgtcct i panTro4.chr19 I 760 C 0 s ponAbe2.chr19 56930309 221 + 60714840 tttTTGAgagacaaagtctcactgcgtcacccaggctggagagcagtgg-gcgatctcagctcactgcaaccttagcctcctgggttcgagcaattctcctgcctcagcctcctgagtagctggggctacaggcacgtgccaccacacctggctaa-tttttgca-tttttagtagagatggtgtttcaccatgttggccagattggactcaaactcctgacct i ponAbe2.chr19 C 0 I 308 s macFas5.chr19 55864831 222 + 59248254 tttttgagagacagagtctcactgcgtcgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgccccctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcgtgcaccaccacacccagctaa-tttttgta-tttttagtagagatggggtttcaccatgttggccaggatggtctcaaactcctgacct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954940 223 + 51301725 tttttt-gagacagagtctcgctctgtcgcccaggctggagtgcagtggccagatctcagctcactggaagctccatctccggggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccttgtccggctagttttttgtattttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655298 222 + 50890351 ttttt--gagacagagtctcgctctgtcgcccaggctagtgtgcagtggccggatctcagctcactgtaagctccgcctctggggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccacctcgccccgctagttttttgtattttttagcagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I a score=-4367.000000 s hg38.chr19_GL949748v2_alt 1044831 3 + 1064304 c--ag s panTro4.chr19 59978652 3 + 63644993 c--ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930838 3 + 60714840 c--ag i ponAbe2.chr19 I 308 C 0 s macFas5.chr19 55865053 3 + 59248254 cag-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955163 1 + 51301725 c---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655520 1 + 50890351 c---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I a score=19507.000000 s hg38.chr19_GL949748v2_alt 1044834 11 + 1064304 gtgatccacct s panTro4.chr19 59978655 11 + 63644993 gtgatccacct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930841 11 + 60714840 gtgatccacct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708247 11 + 64156825 gtgatccgcct i rheMac3.chr19 I 669 C 0 s macFas5.chr19 55865056 11 + 59248254 gtgatccacct i macFas5.chr19 C 0 I 663 s papAnu2.chr19 47955164 11 + 51301725 gtgatccgccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655521 11 + 50890351 gtgatccgccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=122083.000000 s hg38.chr19_GL949748v2_alt 1044845 72 + 1064304 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacccggcc--gggaagctg-ttttttaata s panTro4.chr19 59978666 72 + 63644993 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacccggcc--aggaagctg-ttttttaata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930852 72 + 60714840 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacctggcc--gggaagctg-ttttttaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708258 74 + 64156825 gtctcggcctcccaaagtgctgggattacaggcttcagctaccgcgcccggccGGgggaggctg-ttttttaata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55865730 74 + 59248254 gtctcggcctcccaaagtgctgggattacaggcttgagctaccgcgcccggccGGgggaggctg-ttttttaata i macFas5.chr19 I 663 C 0 s papAnu2.chr19 47955175 74 + 51301725 gtctcggcctcccaaagtgctgggattacaggcttgagccactgcacccggccaggggAGGCTG-ttttttaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655532 75 + 50890351 gtctcggcctcccaaagtgctgggattacaggcttgagtcaccgcgcccggccgggggaggctgtttttttaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=86139.000000 s hg38.chr19_GL949748v2_alt 1044917 43 + 1064304 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt s panTro4.chr19 59978738 42 + 63644993 gatacagagttt--gttttgcaaaat-aaaaaaa-gacctgaaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930924 42 + 60714840 gatacagagttt--gttttgcaaaat-aaaaaaa-gacctgaaggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708332 44 + 64156825 gatacagagttt--gttttgcaaaataaaaaaaaagacctgaaggt i rheMac3.chr19 C 0 I 12 s macFas5.chr19 55865804 43 + 59248254 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955249 43 + 51301725 gatacagagttt--gttttgcaaaat-aaataaaagacctgAAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655607 43 + 50890351 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt i chlSab2.chr6 C 0 I 12 s canFam3.chr1 20142021 44 - 122678785 ggcacagaatttcagttttgcaagat-gaaaaga-gctctggacat i canFam3.chr1 I 2211 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=6938.000000 s hg38.chr19_GL949748v2_alt 1044960 11 + 1064304 ggacggtggtg s panTro4.chr19 59978780 11 + 63644993 ggacggtggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930966 11 + 60714840 ggacggtggtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55865847 8 + 59248254 ---cttttgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47955292 8 + 51301725 ---CTTTTGTG i papAnu2.chr19 C 0 I 4 s canFam3.chr1 20142065 11 - 122678785 ggatggtggtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e chlSab2.chr6 47655650 12 + 50890351 I e rheMac3.chr19 60708376 12 + 64156825 I a score=318409.000000 s hg38.chr19_GL949748v2_alt 1044971 173 + 1064304 atggttgcacaacaatgtgaatatacttaacatcactgaattgtacac-ttaaaatggttaagatggtacattttactttatgcatagtttacca-aactaaaaaTAAAGAAAAATTTTAgactgggcatggtggctcatgcctgtaatcccagcactttgggaggccaaagtgg s panTro4.chr19 59978791 173 + 63644993 atggttgcacaacaatgtgaatatacttaacatcactgaattgtatac-ttaaaatggttaagatggtacattttactttatgcatattttacca-aactaaaaaTAAAGAAAAATTTTAgactgggcatggtggctcatgcctgtaatcccagcactttgggaggccaaagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930977 174 + 60714840 atggttgcacaacaatgtgaatatacttaacattactgaactgtacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaaTAAAGAAAAATTTTAggctgggcatggtggctcatgcctgtaatcccagcactttgggaggccacagtgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708388 163 + 64156825 atggttgcacaacaatgtgaatatactcaacactactgaattgcacgc-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtgg i rheMac3.chr19 I 12 C 0 s macFas5.chr19 55865859 163 + 59248254 atggttgcacaacaatgtgaatatactcaacactactgaattgcacgc-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtgg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47955304 163 + 51301725 atggttgcacaacaatgtgaatatactcaacactactgaattgcacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaagt----aaaaattttaggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtGG i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47655662 163 + 50890351 atggttgcacaacaatgtgaatatactcaacgctactgaagtgcacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcacggtgg-------cagtaatcccagcactttcggaggccaaagtgg i chlSab2.chr6 I 12 C 0 s canFam3.chr1 20142076 131 - 122678785 ttagttgcacaacagtgtgaatgtgcttaatgccactgaactgtacactttaaaatgattaagagagtaaattttatgtcttgtgcattttaccataattaaaaaT----AAAGA-------------AGGATgg---------------------------gacgcctgggtgg i canFam3.chr1 C 0 I 157 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=367728.000000 s hg38.chr19_GL949748v2_alt 1045144 199 + 1064304 agaatagtatgagcccaggagtttgagagcggcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggtttggtggcacgcatctgcaccctcagctacttgggaggctgaggtgggaggtctgcttgagcccaggaggtcaaggctatgatgagctgtgattgtgccactgcaccccaggc s panTro4.chr19 59978964 200 + 63644993 agaacagtatgagcccaggagtttgagagcggcctggacaacacggcaaaaccttatctctacaaaaaaatacaaaaattagcaggtttggtggcacgcatctgcaccctcagctacttgggaggctgaggtgggaggtttgcttgagcccaggaggtcaaggctatgatgagccgtgattgcgccactgcaccccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931151 199 + 60714840 agaacagtatgagcccaggagtttgagagcggcctggacaacaccgcaaaaccttatctctacaaaaaa-tacaaaaattagcaggtttggtggcacgcatctgcagcctcagctacttgggaggctgaggtgggaggtttgcttgagcccaggaggtcgaggctatgatgagccgtgattgtgccactgcaccccagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708551 199 + 64156825 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagccgtgattgcgccactgcaccccagcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866022 199 + 59248254 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagccgtgattgtgccactgcaccccagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955467 199 + 51301725 AGAATAgcatgagcccagaagtttgagaccagcctggacaacatggcaaaaccttatctctacaaaaaa-aacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagctgtgattgtgccactgcaccccagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655825 199 + 50890351 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcagacttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtgaaggctatgatgagccgtgattgtgccactgcaccccagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20142207 157 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=38479.000000 s hg38.chr19_GL949748v2_alt 1045343 31 + 1064304 tgggtgacagagcaagaccc---catctcaaaaa s panTro4.chr19 59979164 31 + 63644993 tgggtgacagagcaagaccc---catctcaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931350 31 + 60714840 tgggtgacagagcaagactc---cgtctcaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708750 29 + 64156825 tgggtgacacagcaagaccc---tgtctcaaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866221 29 + 59248254 tgggtgacacagcaagaccc---tgtctcaaa-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955666 29 + 51301725 tggatgacacagcaagaccc---tgtctcaaa-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656024 29 + 50890351 tgggtgacagagccagaccc---tgtctcaaa-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142364 31 - 122678785 taaataatatataaaaatataaataaataaa--- i canFam3.chr1 I 157 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=642346.000000 s hg38.chr19_GL949748v2_alt 1045374 273 + 1064304 taataataataa---------aTGTTTACATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAAAA----------CAACACTGTTTTTCCC--TGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagctttgtgatccacacagtggctgttgcacctcctctgccagaggagctgggaagcagccacagatgatgtgaaaa s panTro4.chr19 59979195 273 + 63644993 taataataataa---------aTGTTTAAATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAAAA----------CAACACTGTTTTTCTC--TGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagagagtaaataatttcagctttgtgacccacacagtggctgttgcacctcctctgccagaggagctgggaagcagccacagatgatgtgaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931381 280 + 60714840 taataataataa---------aTGTTTAAATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAATCTTGGAAAAAAAAAAAAA----------AAACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagctttgtgacccacacagtgcctgttgcacctactctgccataggagctgggaagcagccatagatgatatgaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398443 272 - 106955855 taataataataa---------ATGTTTAAATTTAAT----AACATGGACA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAA-------------AACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACCTCCACGAcagggatt----------------------------------agcaaac-tttttctacaaacagtcagatagtaaataatttcagccttgtgacccacacagtggctgctgcacctactctgccacaggagctgggacgcagccatagatggtatgataa i nomLeu3.chr10 I 25 I 1994 s rheMac3.chr19 60708779 272 + 64156825 -aataataaTGA---------ATGTTTACATTTAAT----AACACGGGCA--ATTGGTTCAGATGCTCATTTTCTCAACCTTG---AAAAAAAAAAA--------------ACTGTTTTTCTCTATATCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcaggtatc----------------------------------agcaaac-tttttctacgaacagccagatagtaaataatttcagacttgtgacccatacagtggctcttgcacctcctctgccatagtaactgggaagcagtcatagatgatatgaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866250 270 + 59248254 -aataataataa---------aTGTTTAAATTTAAT----AACACGGGCA--ATTGGTTCAGATGCTCATTTTCTCAACCTTG-----AAAAAAAAA--------------ACTGTTTTTCTCTATATCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcaggtatc----------------------------------agcaaac-tttttctacgaacagccagatagtaaataatttcagacttgtgacccatacagtggctcttgcacctcctctgccatagtaactgggaagcagtcatagatgatatgaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955695 270 + 51301725 -aataataataa---------atgtttaaatttaat----aaCACGGGCA--ATTGGTTCAGATGCTCATTTTCtcaaccttg------aaaaaaaa--------------actgtttttctctatatctttttctccttttctgtaaaCTGAAATCCTAATATCACTGACCTCCAGGACAGGTATC----------------------------------AGCAAACTTTTTTCTACGAAcagccagatagtaaataatCTCAGACTTGTGACCCATACAGTGGCTCTTGCACCTCCTCTGCCATAGTAACTGGGAAGCAATCGTAGATGATATGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656053 284 + 50890351 -aataataataa---------aTGTTTAAATTTAAT----AACACGGGCG--ATTGGTTCAGATGCTCATTTTCTCAACCTTG-----AAAAAAAAAATAAATGAATAAACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcagggatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagacttgtgacccacacagtggccgttgtacctcctctgccatagtaactggggagcagtcatagatgatatgaaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142395 295 - 122678785 taataaaaataaaGAAGGAGGAGGTCTGAAGAGGAGAGAAAACATGGGCACTGTATATTCAGATTCTGGTCCTCACAGCTTTG-----AATAAAGCA-------------------TTTCCTCTCAGCCTTTGTT--------------------TTCTAATATCATCTACCTCAAGGGTAGGGttttcttttttttttttttttttttttttttttttAAGGGTAGG-Gttttctgcaaaggacaggatagtaaataatttcgtcctcgtgggccatatggtccctactgcaactattctgccattatagcaggaaagccaccatagacaagatgcaca i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I a score=203527.000000 s hg38.chr19_GL949748v2_alt 1045647 79 + 1064304 caagtgagca-cagctgtgttcccataaaa--ctttatttat-aaaaataagcagtgcgccacagttcgccagcTCCTGTTTG s panTro4.chr19 59979468 79 + 63644993 caagtgagca-cagctgtgttcccataaaa--ctttatttac-aaaaataagcagtgCCCCACAGTTCGCCAGCTCCTGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931661 79 + 60714840 caagtgagca-tagctgtgttcccataaca--ctttatttac-aaaaataagctgtgggccacagtttgccagcTCCTGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400709 80 - 106955855 caagtgagca-tagctgtgttcccataaaaacttttatttac-aaaaataagcagtgggccACAGTTTACCAGCTCC-ATTTG i nomLeu3.chr10 I 1994 C 0 s rheMac3.chr19 60709051 78 + 64156825 caagtgagca-tagctgtgtt-ccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTGTTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866520 78 + 59248254 caagtgagca-tagctgtgtt-ccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTGTTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955965 79 + 51301725 CAAGTGAGCA-TAGCTGTGttcccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTgtttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656337 79 + 50890351 caagtaagca-cagctgtgttcccataaaa--ctttattttc-aaaaataagcagtgggccATAGTCTGCCAGCTCCTGTTTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142690 74 - 122678785 caaatgagcattagctgtgttctaataaaa--ctttatttacaaaaaataagcaatgggccatagtttgccagcTC------- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I a score=163497.000000 s hg38.chr19_GL949748v2_alt 1045726 58 + 1064304 Agagtctctctccgatgcccaggctggagcgcagtgatgcaatctcagctcactgcaa s panTro4.chr19 59979547 58 + 63644993 Agagtctgtctccgatgcccaggctggagtgcagtggtgcaatctcagctcactgcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931740 58 + 60714840 Agagtctctctccgatgcccaggctggagcgcagtagcgcaatctcagctcactgcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400789 58 - 106955855 Agagtctctctccgatgcccaggctggagcacagtggcgcaatctcagctcactgcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709129 58 + 64156825 Agagtctcgctccgatgcccaggctggagtacagtgatgcaatctcagctcactgcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866598 58 + 59248254 Agagtctcgctccgatgcccaggctggagtacagtgacgcaatctcagctcactgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956044 58 + 51301725 agagtctcgctctgatgcccaggctggagtacagtgacgcaatctcagctcactgcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656416 58 + 50890351 Agagtctcgctccgatgcccaggctagagtgcagtggtgcaatctcggctcactgcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65790 58 + 138250 agagtctcgctgtgttgcccaggctggagggcagcagcacaatctcagctcactgcaa i calJac3.chr22_GL285922_random I 195 C 0 s canFam3.chr1 20142764 7 - 122678785 ---------------------------------------------------ACTGTAA i canFam3.chr1 C 0 C 0 a score=692333.000000 s hg38.chr19_GL949748v2_alt 1045784 229 + 1064304 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccgccacacctggctgatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccaggcttcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagcTACCTGTCAT s panTro4.chr19 59979605 229 + 63644993 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccgccacacctggctgatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccaggcttcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagcTACCTGTCAT i panTro4.chr19 C 0 M 1933 s ponAbe2.chr19 56931798 229 + 60714840 cctctgcctcctgggttcaagtgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccaccacacctggctaatttttgtatttttagtagagacagggttttgccatgttggccaggctggtttcgaactccatacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagctACCTGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400847 229 - 106955855 cctctgcctccggggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccaccacacctggctaatttttgtatttttagtagagacggggttttgccatgttggccaggccagtttcgaactccagacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagtgtgagccaccgcgcccagcTACCTGTCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709187 229 + 64156825 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggtgctcgccaccacgcctggctaatttttgtatttttagtagagatggggttttgccgtgttggccaggctgggttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866656 229 + 59248254 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggtgctcgccaacacgcctggctaatttttgtatttttagtagagacggggttttgccgtgttggccaggctggtttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956102 229 + 51301725 cctctgcctcttgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgctcgtcaacacgcctggctaatttttgtatttttagtagagatgcggttttgccgtgttggccaggctggtttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggctacctGTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656474 229 + 50890351 cctctgcctcctgggttcaagcgattctcctgtctcagcctcatgagtagctgggattacaggtgctagccaacacgcctggctaatttttgtatttttagtagagacggggttttgccgtgttggccaggctggtttcgaactctggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65848 226 + 138250 actccacctcccgggttcaagcaattctcctaccttggcctc-tgagtag-tgggattacaggagcacagcaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtgatccacccacctcagccttccaaagtgctgggattac-aggcgtgagccactgtggccagccCCCTGTCAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20142771 0 - 122678785 C a score=5348.000000 s hg38.chr19_GL949748v2_alt 1046013 2 + 1064304 TG s ponAbe2.chr19 56932027 2 + 60714840 TG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401076 2 - 106955855 TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709416 2 + 64156825 TG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866885 2 + 59248254 TG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956331 2 + 51301725 TG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656703 2 + 50890351 TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66074 2 + 138250 TG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20142771 0 - 122678785 C e panTro4.chr19 59979834 1933 + 63644993 M a score=932919.000000 s hg38.chr19_GL949748v2_alt 1046015 340 + 1064304 AATTTGGAAGGATGGCATGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTTATTATAAAGAGAACAATGCATGCATATTCC-TCCTCTGAGGA---TCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTGTTTGGACTCCAGGTGGGCTGTCCACGCCTTTACCATTTTCCTGGTTGTTAACATGTTCCTGATCAGCACTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATTCTCATTCACAT----tctgtctc s ponAbe2.chr19 56932029 342 + 60714840 AATTTAGAAGGATGGCATGAAGTCATTCAAAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTGATTATAAAGAGAACAATGCATGCAAATTCC-TCCTCTGAGGA---TCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTCCACCCCTTTACCATTTTCCTGGTTGTTAACAAGTTCCTGATCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGAGTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTACGGCACCCAATTCTCATTCACAT--tctctctctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401078 344 - 106955855 AATTTGGAAGGATGGCATGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTTATTATAAAGAGAACAATGCATGCAAATTCC-TCCTCTGAGGA---CCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTATTTGGACTCCGGGTGGGCTGTCCACCCCTTTACCATTTTCCTGGTTGTTATCAAGGTCCTTATCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCTATCAGAGGCTTTATGGCACCCAATTCTCATTCACATtctctctctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709418 339 + 64156825 AATTTGGAAGGATGACGTGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATTCTCATTCTCAT--tctctctctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866887 335 + 59248254 AATTTGGAAGGATGACGTGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATtctcattctcat------tctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956333 339 + 51301725 AATTTGGAAGGATGACATGAAGTCGTTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCaattctcattctcat--tctctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656705 339 + 50890351 AATTTGGAAGGATGACATGAAGTCATTCATAACAAGGACTTACTCCATAGTAAGTACCAGAACATTGCTGGCTGTTAGTATGGTTATTATAAAGAGAACAACACATGCAAATTCC-TCCTCTGAGGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATtctcattctcat--tctctctctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66076 340 + 138250 AATTTGGAAGGATGACATGAAGTCATCCATAACAAGGACTTAATCCATAGTAAGTGCCAGATCATTGCTGGCTGTTAACACTGTTATCACAAAGAGAACAATTTGTGCAAATTTG-TCCTCTGAGGACCTCCTCCTACCTGACTCCCAGACACACCCAAGGGAGTTAAAACATCTATTTGGATTCCCCGTGGGCTGTCCACCCCTTCACCATTTTTCTCGTTAAC---AAATTCCTGATCAGCATTAGGTGCTGTCCCGGGTCCTGAAAGGATTCTCCCACAATGCCCTTTGCTTTCCGCATCAGAGGGTTTATGGCACCCAGTTCTCATTCTCAT----TCTCTCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20142771 328 - 122678785 AGTCTGGAAGGTTGACATACAGTCATTCACAAGAAGGACCTAA--CACAGTAAGTACCAGAACATTGCTGGCTGCTAAAGTAGTTATTATACAGGAAATAATGTATGCAAATTCCTTTCTCTGAGGA---CCTCCCACCTGGTTCCCAGACACACCCAAGGTGTTAAGAAACTCTCTTTGGACTCCAGGTAGGCTATGCTCCTCTTTATCACTGTTGATGTTCCT---GAATTCTTGATAACCATCGGGTGCTGTCCCAGGTGCTGAGAGACTTCTCCCGCAAAGCCCTCTGCTTTCCCTATCAG-GGGCTTACAGCCCAAAAT---------CAT--TCTCTGTCTC i canFam3.chr1 C 0 I 1683 e panTro4.chr19 59979834 1933 + 63644993 M a score=39291.000000 s hg38.chr19_GL949748v2_alt 1046355 25 + 1064304 tcctttctcgttcttctctatctct s ponAbe2.chr19 56932371 25 + 60714840 tcctttctcgttcttctctatctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401422 24 - 106955855 tcctttctcgttc-tctctctctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709757 25 + 64156825 tcctttcttgttcttctctaactct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867222 25 + 59248254 tcctttcttgttcttctctaactct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956672 25 + 51301725 tcctttcttgttcttctctaactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657044 25 + 50890351 tcctttcttgttcttttctgactct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66416 25 + 138250 TATTTGATCACCACCTCCTACCCCT i calJac3.chr22_GL285922_random C 0 I 78 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=11034.000000 s hg38.chr19_GL949748v2_alt 1046380 15 + 1064304 cctctctct-gtctcc----- s ponAbe2.chr19 56932396 15 + 60714840 cctctctct-ctctcc----- i ponAbe2.chr19 C 0 I 244 s nomLeu3.chr10 103401446 15 - 106955855 tctctttcc-ctctct----- i nomLeu3.chr10 C 0 I 10 s rheMac3.chr19 60709782 20 + 64156825 cctctctct-ccccccctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867247 20 + 59248254 cctctctct-ccccccctcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956697 21 + 51301725 cctctctctcccccccctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657069 9 + 50890351 cctctctct------------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66441 78 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6840.000000 s hg38.chr19_GL949748v2_alt 1046395 5 + 1064304 ttttc s ponAbe2.chr19 56932655 5 + 60714840 ttttc i ponAbe2.chr19 I 244 C 0 s nomLeu3.chr10 103401471 5 - 106955855 ttttc i nomLeu3.chr10 I 10 C 0 s rheMac3.chr19 60709802 5 + 64156825 ttttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867267 5 + 59248254 ttttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956718 5 + 51301725 ttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657078 1 + 50890351 ----c i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66441 78 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=33636.000000 s hg38.chr19_GL949748v2_alt 1046400 35 + 1064304 tcttcctctctccctc-tctgtcttctctccctctc s ponAbe2.chr19 56932660 31 + 60714840 tcttcctctctccct-----gtcttctctccctctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401476 33 - 106955855 tcttcctctctccct---ctgtcttctctccctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709807 36 + 64156825 tcttcctctctctctcctctgttttctctctctctc i rheMac3.chr19 C 0 I 120 s macFas5.chr19 55867272 35 + 59248254 tcttcctctctctctcctctgttttctctctctct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956723 24 + 51301725 tcttcttctctctctcctctgttt------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657079 16 + 50890351 tctccctctctctctc-------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66519 32 + 138250 tctctctctctccctc----tctttctattcctctc i calJac3.chr22_GL285922_random I 78 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=57571.000000 s hg38.chr19_GL949748v2_alt 1046435 172 + 1064304 tc-tccctctctcttcctctct--------------ctcttcctct---------gtcctct----tttctc-------tctctctctccctctctctcaca----tctctctttc--ccttcctttctctttc------ctctct------cttcctctctccctctccctccttct----gtcttcctctatccctctct--tcctct-------tttttcttcctctct--tcttgt s ponAbe2.chr19 56932691 211 + 60714840 tc-tccctctctcttcctctctttct--------ctctcttcctct-------ctgtcctctct--tttctc---cctgtctctctctccctctctctctcacatctctctctttc--ccttcctttctctttc------ctctctttctgtcttcctctctccctctccctccttctctctgtcttcctctctccctctctcttcctctctctccttttttcttcctctctcttctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401509 216 - 106955855 tc-tccctctctctgcctctctctctgtcttctcttttctccctctctcatctctttcccttct--tttctctttcctctctttctcttcctctctccctt-----tccctccttctgtcttcctctctccctc-----tccctccttctgtcttcctctctccctctccctccttct----gtcttcctctctccctctctcttcctct-----ctcttttcttcctctct--tcttgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55867307 134 + 59248254 ---------------cctctgt---------------tttctctct-------gtctcctctct--tttctc-----------------cctctctctcacacacacacgtctttc--ccttcctttctctttctctttcctctctctcttcctctctctctccctctccctccttctctctgtcttcctct------------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956747 143 + 51301725 ---tatctctctc-tcctctgt---------------tttctctct-------gtctcctctct--tttctc-----------------c--ctctctcacacacacacgtctttc--ccttcctttctctttctctttcctctctctcttcctctctctctccctctccctccttctctctgtcttcctct------------------------------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657095 115 + 50890351 tctcctttttctcttcctctct---------------ctctcctct-------gtcttctctctcctttctc-----------------cctctctctcacacacacacgtgtttc--ccttcctttctctttc--------------ctctctttctctcttcctctcc---------------------------------------------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66551 116 + 138250 -----------tctccgtctct--------------cttttcctct-------cacttctctctc-cctctc-----------------accctctatctca----------tctc--tctccccatctcaccc----------ctctccgccttcctctttctctctcctttcttcc---tctcttcttg------------------------------------------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e rheMac3.chr19 60709843 120 + 64156825 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6292.000000 s hg38.chr19_GL949748v2_alt 1046607 12 + 1064304 ctctttctctcc s ponAbe2.chr19 56932902 12 + 60714840 ctctttctctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401725 12 - 106955855 ctctttctctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709963 8 + 64156825 ----ctctttcc i rheMac3.chr19 I 120 C 0 s calJac3.chr22_GL285922_random 66667 7 + 138250 -----tctctcc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e chlSab2.chr6 47657210 0 + 50890351 C e papAnu2.chr19 47956890 0 + 51301725 C e macFas5.chr19 55867441 0 + 59248254 C e panTro4.chr19 59979834 1933 + 63644993 M a score=95779.000000 s hg38.chr19_GL949748v2_alt 1046619 107 + 1064304 tctctctctccctctttctctttctctctctcttcctctc--ccttcctcttcctctctctccttctttct---tcctctctctcttcttgtgtgtg---------------tctctctctctc--------tgt s ponAbe2.chr19 56932914 115 + 60714840 tctctctctccctctctctccttctctctctcttcctctctccctccctcttcctctctctccttctttct---tcctctctctcttcttgtctctc---------------tctctctctctc--ctctcttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401737 99 - 106955855 tctctccctctctc-----------ctctctcttcctctc--cctccctcttcctctctct-----gttct---tcctctctctcttcttgtctctc---------------tctctctctcctctctctcttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709971 121 + 64156825 tctctctctccctctccctccttctctctgtcttcctctctccttctctcttcctctctctccttttttct---tcctctctctcttcttgtctctctcccctctctcttcttctctctctctt----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867441 90 + 59248254 -----------------ctccttctctcttcct--ctctctccttttttcttcctctctctcttcttgtctctctcccctctctcttcttctctctc---------------tctctctctctt----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956890 82 + 51301725 -----------------ctccttctctcttcct--ctctctccttttttcttcctctctctcttcttgtctctctcccctctctcttct-----------------------tctccctctctt----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657210 101 + 50890351 -----ctctccctctccctccttctctctgtcttcctctctccttctctcttcctctctc---ttttttct---tcctctctctcttcttgtctctctcc------------cctctctcttct----------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66674 0 + 138250 C e panTro4.chr19 59979834 1933 + 63644993 M a score=146470.000000 s hg38.chr19_GL949748v2_alt 1046726 62 + 1064304 tctctctctccctctccccccaactctctttccctACACACATCTTAAGAGGCCTCAGCAGT s ponAbe2.chr19 56933029 62 + 60714840 tctctctctccctctccccccaactctctctccctACACACATCTTAAGAGGGCTCAGCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401836 62 - 106955855 tctctctctccctctccccccaactctctctccctACACACATCTTGAGAGGCCTCAGCAGT i nomLeu3.chr10 C 0 M 2007 s rheMac3.chr19 60710092 62 + 64156825 tctctctctccctctcCCCCCAGCTCTCTCTACCTACATACATCTTCAGAAGCCTCAGCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867531 62 + 59248254 tctctctctccctctccccccagctctctctACCTACATACATCTTCAGAAGCCTCAGCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956972 62 + 51301725 tccctctctccctctccccccagctctctctACCTACATACATCTTGAGAAGCCTCAGCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657311 62 + 50890351 tctctctctccctctccccccaactctctctccctACATACATCTTGAGAAGCCTCAGCAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66674 62 + 138250 tctctctctccctctcCCCCCAACTCTCTCTCCCTACACCCATCTTGAGAGCCCTTAGCAGT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=473290.000000 s hg38.chr19_GL949748v2_alt 1046788 300 + 1064304 GTAAGGTAAGTTTAGCGACCCTGTGGCTGTGTAGAGATAAGCAAAGGGGGGCaaggagctccagtggtcccagactccagccatttgagtctttgcagcccaagcactgccccagcttcttgacagccccagccatcaccaaagggcacacagataagctgcctccaccaaggcctgtgcagatggtaggtttttgagtaaaatagatatgatccttgtctgaagccactgagttttagaataatttgttatatggccatagtaactggaaTGATTGCTGTAGGTTTATTTTA--TTTTATT s ponAbe2.chr19 56933091 299 + 60714840 GTAAGGTAAGTTTAGCGACCCTGAGGCTGTGTAGAGATAAGCAAAGGGGGGCaaggagctccagttgtcc-agactccagccgtttgagtctttccagcccaagcaccgccccagcttcttgacagccccagccatcaccaaagggcacacagataagctgcctccaccaaggcctgtgcagatagtaggtttttgagtaaaatagatatgatccttgtctgaagccactgagttttagaataatttgttacatggccatagtaactggaaTTATTGCTCTAGGTTTATTTTG--TTTTATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60710154 294 + 64156825 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCAGAGATAAGCACA-GGGGCCAACGAGctccagttgtcccagactccagccgtttgaatatttccagcccaagcacctccccagcttcttgccagccccagccatcaccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaagtttttgagcaaaataaatacggtccttgtctgaagccactgagttttagaataatttgttatatggctgtagtaactggaaTGATTGCTCTAGG-----TTTA--TTTTATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867593 294 + 59248254 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCGGAGATAAGCACA-CGAGCCAACGAGCTCCAGTTGTCCCAGACTCCAGCCGTTTGAATCTTTCCAGCCCAAGCACCTccccagcttcttgccagccccagccatcaccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaagtttttgagcaaaataaatacggtccttgtctgaagccactgagctttagaataatttgttatatggctgtagtaactggaaTGATTGCTCTAGG-----TTTA--TTTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47957034 298 + 51301725 GTAAGGTAAGCTTAGCTGCCCTGAAGCTGTGCAGAGACAATCACA-GGGGCCAACGAGCTCCACTTGTCCCAGACTCCAGCCGTTTGAGTCTTTCCAGCCCAAGCACCTCCCCAGCTTCTTGCCGACCCCAGCCATCACCAAAGGGCACACAGATAAGCTGCCTCCACCAGGGCCTGTGCAGATGGTAGGTTTTTGAGCAAAATAGATATGGTCCTTGTCTGAAGCCACTGAGTTTTAGAATAATTTGTTATATGGCTGCAGTAACTGGAATGATTGCtctaggttta-ttta--ttttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657373 298 + 50890351 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCAGAGATAAGCACA-GGGGCCAATGAGCTCCAGTTGTCCCAGACTCCAGCCGTTTGAGTCTTTCCAGCCCAAGCACCTccccagtttcttgccaaccccagccatcgccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaggtttttgagcaaaataaatatggtccttgtctgaagccactgagttttagaataatttgttatatggctgcagtaactggaaTGATTGCTCTAGGTTTA-TTTA--TTTTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66736 284 + 138250 GTAAGATGAGTTTAGCTACCCCAAAGCTCTGTCGAGATAAGAACG-GGGGCCAAGGAGCTCCAGCTGTCCCAGACTCT----------GTCTTTCCAGCTCAGGCACCTCTCCAGCTTCTT-----CCAGAGCCATCACCAAAGGGCGCGCagataagcgacctccaccaagccctgtgcatacagtagattattgagcaaaataaatatggtccttgtctgaagccactgggttttagaataatttgttacatgcctgtagtaactACAATGATTTCTCCGGGttt--tttaacttttatt i calJac3.chr22_GL285922_random C 0 T 342 e canFam3.chr1 20143099 1683 - 122678785 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=966428.000000 s hg38.chr19_GL949748v2_alt 1047088 773 + 1064304 CATCCTTGCTGCATGCAACACAT-GCATGGCTCAGTAACTAGAaggaaagaagagaagaagggagggagaggcagagggtggacaggagaggatggtaggaaggaaaga---caggaaaggagGGTGTTGGTGGCCTTGCCTGCAAGCTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGTCCCCGTGTCGGAGAGCTGGGCAAGC-TTTCTGCAGGAAATGATGGGGATCACGGCCATGTGAGCCGGCAAGATTTCCCTCAGCCAgggaggagactccgggctgtgggaacagcttaagcagaaggcatgggacaggaatgcatatgagagatattgtgggaggagggaggg-ctgcctgggctggcatgcagggtatgggagggggtggaagggctgaggcgggagcc--atcagtaaaaggacccagagcgcggctccaatgccatggtaggaagcttggcgttgactcagagggcgctgggtaccgctgaagagtgttgagccaaggagggtcatgtcacgggcagatacatgttttagaatttct-tcttttctggctgagatgtagagtatggactggagagaagcacaggggacataggaaaggtagttCTAGAAAGAGGGGCTGTCCCACCAGGGAAAGTCAACCAACTGTTCCCCAGTATCCATTCCTCCCTTCCAGCTCATGGCACTAAAGCCACTGATTGATTAGCTGGGTGCTATCAatctctctctc s ponAbe2.chr19 56933390 770 + 60714840 CATCCTTGCTGCGTGCAACACAT-GCATGGCTCAATAACTAgaaggaaagaagagaagaagcgaggaaggggcagagggtggataggagaggatggtaggaaggaaagaagacaggaaaggaggGTGTTAGTGGCCTTGCCTGCAAGCTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGTCCCTGTGTCGGAGGGCTGGGCAAGC-TTTCTGCAGGAAGTGATGGGGATCACGGCCATGTGAGCCGGCAAGATTTCCCTCAGCCAgggaggagactccaggctgtgggaacagcttaagcagaaggcatgggacaggaatgcag--cggagatattgtgggaggagggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagtaaaaggacccagagcgcggctccaatgccatcgtaagaagcttggcgttgactcagagggcgctgggtactgctgaagagtgttgagccacggagggtca-----cgggcaggtacatgttttagaatttct-tcttttctagctgagatgtagagtatggactggagagaagcaccggggacataggaaaggtagttCTAGAAAGAGGGACTGTCCCACTAGGGAAAGTCAACCAACTGTTCCCCAGTATCCATTCCTGCCTTCTAGCTCATGGTACTAAAGCCAGTGATTGATTAGCTGGGTGCCATCAAtctctctctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60710448 769 + 64156825 CATCCTCGCTGCATGCAGCACGTGGCATGGCTCAGTAACTAgaaggaaagaaaagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggagCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGttggagagctgggcaagcttttctgtaggaaatgatggggatcacggccatgtgagccggcaggatttcctccagccaggagggagactccaggctgtgggaacagcttaagcagaaggcaggggacaggaatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcgtagactcagagggtgctgggtaccactgaagggtgttgagccacggagggtcg-----tgggcagatacgtgctttagaattgctgttttttctggctgagatgtagagtatggactggagaggagcacaggggacataggaagggcagttctagaaggAGCAACTGTCCCACTAAGGAAAGTCAAGTAAC--TTCCTCGGTATCCATTCTTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAATCTCTCTCTC i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55867887 769 + 59248254 CATCCTCGCTGCATGCAGCACGTGGCATGGCTCAGTAACTAGaaggaaagaaaagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggaGCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAGCAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGttggagagctgggcaagcttttctgtaggaaatgatggggatcacggccatgtgagccggcaggatttcctccagccaggagggagactccaggctgtgggaacagcttaagcagaaggcaggggacaggaatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcgtagactcagagggtgctgggtaccactgaagagtgttgagccacggagggtcg-----tgggcagatacgtgctttagaattgctgttttttctggctgagatgtagagtatggactggagaggagcacaggggacataggaagggcagttctagaaggAGGAACTGTCCCACTAAGGAAAGTCAAGTAAC--TTCCTCGATATCCATTCTTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAAtctctctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47957332 768 + 51301725 catcctcGCTGCATGCAGCACGTGGCATGGCTCAGTAactagaaggaaagaagagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggagCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGTTGGAGAACTGGGCAAGC-TTTCTGTGAGAAATGATGGGGATCAC--CCCTGTGAGCCGGTAGGATTTCCTCCAGCCAGGAGGGAGACTCCAGGCTGTGGGAACAGCTTAAGCAGAAGGCAGGAGACAGGAATGCAG--GAGAGCTAttgtgggagaggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcAGGAGCCAGATGAGT-AAAGGACCCAGAGCGTGGCTCCAATGCCATGGTAGGAAGCTTGGCGTAGACTCAGAGGGTGCTGGGTACCACTGAAGAGTGTTAAGCCACAGAGGGTCG-----TGGGCAGATACGTGCTTTAGAATTGCTGTTTTTTCTGGCTGAGATGTAGAGTATGGACTGGAGAGGAGCACAGGGGACATAGGAAGGGCAGTTCTAGAAGGAGGAACTGTCTCACTAAGGAAAGTCAAGTAAC--TTCCCCAGTATCCATTCCTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGctatcaatctctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657671 761 + 50890351 CATCCTCGCCGCATGCAGCACGTGGCATGGCTCAATAACTAGaaggaaagaagagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaagaagacaggaaaggaGCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGTTGGAGAGCTGGGCAAGC-TTTCTGTAGGAAATGATGGGGATCACGGCCATGTGAGCTGGCAGGATTTCCTCCAGCCAGGAGGGAGACAccaggctgtgggaacagctgaagcagaaggc--ggggcagggatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcatagactcagagggtgctgggtaccactgaagagtgttgagccacggagggtca-----tgggcagatacatgctttagaattgctgttttttctggttgagatgtagagtatggactggagaggagcacaggggacatagga-----agttctagaaggaggaactgtctcactaaGGAAAGTCAAGTAAC--TTCCCCAGTATCCATTCTTCCCTTCCAGCTCATGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAAtctctctctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=27466.000000 s hg38.chr19_GL949748v2_alt 1047861 63 + 1064304 atctctct-----ctccctctttctctccccctcatctgtgtcttttctctctctcatctctctgtct s ponAbe2.chr19 56934160 51 + 60714840 atctctct-----ctccctctttctccccccctcctctgtgtcttttctctctctc------------ i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55868656 58 + 59248254 -tctctccccccacccccgctttctctccccttcctctgtgtctcctctctctctc-tct-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958100 61 + 51301725 -tctctctc----ccccctctttctctccccctcctctgtgtctcctctctctttc-tctctcatct- i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47658432 51 + 50890351 -tctcccccccc-ccaactctttctctccccctcctctgtgtctcctctctct--------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e rheMac3.chr19 60711217 13 + 64156825 I e panTro4.chr19 59979834 1933 + 63644993 M a score=141233.000000 s hg38.chr19_GL949748v2_alt 1047924 233 + 1064304 ccctctttctgtccccctcctccgtg----tctcctctctctctcttctctgtctcatatctctctcattgctctctccctctttctctccc-cctcctgtgtctccttctctctctctctttctcccccatctctctttctctcccccttcctctctttctcctctcactcttcctgtttctctcttt--ctctttcttcctctctttctccctgtctctctcttcctcttttcctttg s ponAbe2.chr19 56934211 157 + 60714840 ------------------------------tctcatctctctctct-------------------------------ccctctttctgtccc-cctcctgtgtctccttctctctct---------------------ttctctcccccttcctctctttctcctctcactcttcctgtttctctctcttcctctttcttcctctcttcctccctctctctctcttcctcttttcctttg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711230 228 + 64156825 CCCGCTTTCTCTCCCCTTCCTCTGTGtctcctctctctctctctctcatcgctctc---tctctctcatctctctctccctctttctctcccccaccccgtgtctccttctctctctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctctTCCTCTTTTCCTTTG i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55868714 195 + 59248254 ------------------------------ctctctctctctctctcatcgctctc---tctctctcatctctctctccctctttctctccc---ccccgtgtctccttctctctctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958167 138 + 51301725 ------------------------------ccctctttctctccc------------------------cgctctgtgtctccttctctctc----------------tctctatctctctcttt---ctctcccccttactctctc-----------------------tcttcc----tctctgttc--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47658483 187 + 50890351 ------------------------------------ctctctctctcatcactctc---tctctctcatctctctctccctctttctctccc---ccccatgtctccttctc--tctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=143213.000000 s hg38.chr19_GL949748v2_alt 1048157 81 + 1064304 tctctctctctccccccaactctctctccctACACACATCTTGAGAGACCTCAGCAGTGTAAGATAAGTTTAGCTACTCCA s ponAbe2.chr19 56934368 81 + 60714840 tctctccctctcCCCTCAACTCTCTCTCCCTACACACATCTTAAGAGACCTCAGCAGTGTAAGATAAGTTTAGCTACTCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711458 81 + 64156825 TCTCTCCCTCTCCCCCCAACTTTCTCTTCCTACACACATCTTGAGAGACCTCCGCAGTGTAAGATAAGTTTAACTCCCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55868909 81 + 59248254 tctctccctctcCCCCCAACTTTCTCTTCCTACACACATCTTGAGAGACCTCAGCAGTGTAAGATAAGTTTAACTCCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958305 81 + 51301725 tctctccctctccccccaactttctctccctACACACATCTTGAGAGGCCTCAGCAGCGTAAGGTAAGTTTAACTCCccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47658670 81 + 50890351 tctctccctctcCCCCCAACTTTCTCTTCCTACACACGTCTTGAGAGGCCTCAGCAGTGTAAGATAAGTTTAACTCCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66678 81 + 138250 tctctccctctcCCCCCAACTCTCTCTCCCTACACCCATCTTGAGAGCCCTTAGCAGTGTAAGATGAGTTTAGCTACCCCA i calJac3.chr22_GL285922_random T 342 I 1902 e canFam3.chr1 20143099 1683 - 122678785 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=647320.000000 s hg38.chr19_GL949748v2_alt 1048238 536 + 1064304 Cggcctggcacggtagctcacgcctttaatcccagcactttgagaggccaaggcaggcagatcactggagattaggggtttgaaaccagcctggccaacatggtgaaaccctgtctctactacaagtaccaaaaaattagctgggcatggtggcacgcgcctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgagcctgggaggcggaagttgcagtgagccgagacca-cacctctgcactccagcctgggtgacagagtgagattctgtctcaaaaaaa---gaaagaGGAggccgggcactgtggctcaggcctgtaatcccagcactttgggaggccgaggcatgcagatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctatt-aaaaatacaaaaaaattagccaggcacggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgaga s ponAbe2.chr19 56934449 538 + 60714840 Cggcccggcacggtggctcacgcctttaatcccagcactttgagaggccaaggcaggcagatcactggagatcaggggtttgaaaccagcctggccaacatggtgaaaccctgtctctactacaagtaccaaaaaattagctgggcatggtggcacgcacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgagcctaggagacagaggttgcagcgagccaagacca-cacctctgcactccagcctgggtgacacagtgagattctgtctcaaaaaaaaaagaaagaGGAggccgggcactgtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctact-aaaaatacaaaaaa-ttagccgggcatggtggcaggtgcctgtagttccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagcggaga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711539 526 + 64156825 Tggctgggcatggtggtgcacgcctgtaatcctaacactttgggaggccgaggcaggaggatcacttgagatcaggagtttgaaaccagcctggccaaca---tgaaaccctgtctctactacaattaccaaaaaattagct-ggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcagaagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcg-catctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTCAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggctgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaaccagggaggcggagcttgcagtgatctgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55868990 526 + 59248254 Tggctgggcatggtggtgcacgcctgtaatcctaacactttgggaggccgaggcaggaggatcacttgagatcaggagtttgaaaccagcctggccaaca---tgaaaccctgtctctactacaattaccaaaaaattagct-ggcatagtggctcacacctgtagtactagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcg-catctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTCAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggctgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaaccagggaggcggagcttgcagtgatctgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958386 528 + 51301725 tggctgggcatggtggggcacgcctgtaatcctaacactttgggaggccgaggcaggcggatcacttgagatcaggagtttgaaaccagcctagccaaca---tgaaaccctgtctctactacaagtaccaaaaaattagccgggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcgccacctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---gtcAGAGGaggctg------gtggctcacacctgtaatcccaggactttgggaggccgaggcaggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctattaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttgccgtgagtCAAGa i papAnu2.chr19 C 0 I 72 s chlSab2.chr6 47658751 525 + 50890351 Tggctgggcatggtggtgcacgcctgtaatcctgacactttgggaggccgaggcaggcggatcacttgagatcaggagtttgaaaccagcctagccaaca---tgaaaccctgtctctactacaagtaccaaaaaattagcg-ggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagattg-cacctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTAAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggccgagacaggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctact-aaaaatacaaaaaa-ttagccaggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgatctgaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=28076.000000 s hg38.chr19_GL949748v2_alt 1048774 33 + 1064304 tcgcgccactgcactccagcctgggcgacagag s ponAbe2.chr19 56934987 33 + 60714840 tcacaccactgcactccagcctgggcgacagag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60712065 33 + 64156825 tggtgccactgcactccagcctgggcaacagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55869516 33 + 59248254 tggtgccactgcactccagcctgggcaacagag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47659276 33 + 50890351 tggtgccactgcactccagcctgggcaacagag i chlSab2.chr6 C 0 I 383 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=3987.000000 s hg38.chr19_GL949748v2_alt 1048807 12 + 1064304 caagactctgtc s ponAbe2.chr19 56935020 12 + 60714840 caagactctgtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60712098 12 + 64156825 agaaatcctgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55869549 12 + 59248254 agaaatcctgtc i macFas5.chr19 C 0 I 638 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e chlSab2.chr6 47659309 383 + 50890351 I e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6111.000000 s hg38.chr19_GL949748v2_alt 1048819 39 + 1064304 aagaaagaaa-gaaaagaaaagaaaaaaagaaaAGAATAA- s ponAbe2.chr19 56935032 39 + 60714840 aagaaagaaaagaaaagaaaaaaagaaaagaaaagaa-aa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103403960 38 - 106955855 aagggaggga-gagaggaagggaagtaaggaagggag-gg- i nomLeu3.chr10 M 2007 C 0 s rheMac3.chr19 60712110 15 + 64156825 -----------------------tgaaaaaaaaagaa-a-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870199 39 + 59248254 aaggaaggaa-ggaaggaaagaaagaaaaagaaagaa-aga i macFas5.chr19 I 638 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e chlSab2.chr6 47659309 383 + 50890351 I e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=9924.000000 s hg38.chr19_GL949748v2_alt 1048858 28 + 1064304 agggagggagggaagg--gaaaggaaggga s ponAbe2.chr19 56935071 21 + 60714840 agggagggagggaggg---------aggga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103403998 30 - 106955855 agggaggaagggaaggaaggaagggaggga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55870238 20 + 59248254 agggtgggagggaggg---------aggg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958986 21 + 51301725 agggagggaggaaggg--------aaggg- i papAnu2.chr19 I 72 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e chlSab2.chr6 47659309 383 + 50890351 I e rheMac3.chr19 60712125 0 + 64156825 C e panTro4.chr19 59979834 1933 + 63644993 M a score=50696.000000 s hg38.chr19_GL949748v2_alt 1048886 74 + 1064304 aggaaggaaggaagg-aaggaaggaaggaaggaaggaaggaaggaaggggaggggaggggaggggaag------ggaggga s ponAbe2.chr19 56935092 45 + 60714840 aggaa--aaggaagggaaggaaggaaggaagaaagaaagaaagaaag---------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404028 80 - 106955855 gggaggaagggaagt-aaggaagggagggagagaggaagggaggaagggagggagggaggaagggagggaggaaggaagga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712125 32 + 64156825 ----------------------------------------aaggaaggaaggaaggaaggaaggaagg---------agga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870258 71 + 59248254 aggaaggaaggaagg-aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg---------agga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959007 74 + 51301725 agggagggagggagg-aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagcaaggaagg------agaagga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659692 68 + 50890351 ----agggagggagg-gaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg--------aagga i chlSab2.chr6 I 383 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=78437.000000 s hg38.chr19_GL949748v2_alt 1048960 38 + 1064304 agAAAGGCA--------------------GGCCCTGATGTTCAGGGAGCTGAGAGTGA s ponAbe2.chr19 56935137 38 + 60714840 aaaAAGGCA--------------------GGCCCTGATGTTCAGGGAGCTGAGAGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404108 58 - 106955855 aggaaggcaggcaggcaggcaggcaggCCGGCCCTGATGTTCAGGGAGCTGAGAGTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712157 38 + 64156825 aAGAAAGAA--------------------GACCCTGATGTTCAGGGAGCTGAGAGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870329 38 + 59248254 aagaaagaa--------------------gACCCTGATGTTCAGGGAGCTGAGAGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959081 38 + 51301725 aacaaagaa--------------------gacCCTGATGTTCAGGGAGCTGAGAGTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659760 38 + 50890351 aagaaagaa--------------------gACCCTGATGTTCAGGGAGCTGAGAGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68661 38 + 138250 AAAGAGGAA--------------------GACCCTGGGGTTCAGGGAGCGGAGAGTGA i calJac3.chr22_GL285922_random I 1902 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=340370.000000 s hg38.chr19_GL949748v2_alt 1048998 161 + 1064304 AGTCACCGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCAC--CCCC--------CGCCCCGACCCA-------------------------TCCCCCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCACCCCGCCACGATCCCTCCCA s ponAbe2.chr19 56935175 161 + 60714840 AGTCACCAGCTCCAACCCAGGATCCAAATTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCAC--CCCC--------CACCCCAACCCA-------------------------TCCCCCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCGCCCCGCCACGATCCCTCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404166 163 - 106955855 AGTCACCGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCACCACCCC--------CGCCCCGACCCA-------------------------TCCCTCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCGCCCCGCCACGATCCCTCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712195 151 + 64156825 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCGTCACCA---CCCG--------CTCCCCGACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAC----------------------------------GGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870367 160 + 59248254 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCGTCACCA---CCCG--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959119 160 + 51301725 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCATCACCA---CCCG--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659798 160 + 50890351 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCA---CCTC--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCATGATCCCTCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68699 157 + 138250 CGTCACTGGCTCCAACCCAGGATGCAAAGTCAAGTCTGTCTGGGGTCCTGGC-CCCATCACCA---CTC-----------CCTTGACCCA-------------------------GCCCCCACAGACCTGGGAAGGAGCCAGGCTCCTCCAGTTTCAGGACGGGGCTGCCCAAACCGCCCTGCCAGGATCCCTCCCA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20144782 156 - 122678785 agtcacctgGTCTGACCCAAGACCTAAACTCCAGTC--TCTGAGTCCCTTCCACTCGCTGCCC---CCCCCCTCCGGGCCCCCAGGCCCA-------------------------GCCCCCTCCCACCAGCCCTAGGGCCAGTCTCCCCCAGTTTCAGGAAATTG--------ACCCACCCTCC---ATCTCTCCCA i canFam3.chr1 I 1683 C 0 e panTro4.chr19 59979834 1933 + 63644993 M a score=2716755.000000 s hg38.chr19_GL949748v2_alt 1049159 882 + 1064304 GAGAACAAACAG-------------CTCCCGGCCACCGGCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCTGGTTCCCAGACCCACCCTCCCTGTGTCATAAGCGCCTCTCCCCGCACTCTCACCAGGGCTGGCTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCAGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACCGCCGATGAGACCTCCCTCGTCGTACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCTAGACACTCAGGGATGGG-----CCAGCCCATTAGAGTAAGCATTCGGCCACC-TCTAGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGtctcacacctcacttcctccggccagccacacccctgcagatttaacccgccagcctccctaagg--tttcctctgcctgaaatcctctctgcattcctggctcattctcgaaattgaggtcaaagctcagatgccgcctcctt-----------ccctgaccaccctacctgaagcagccgcacctgcctgctcctagtcacgccgttccttcacc----tgtttcgtttcctccacagggtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacctactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag s panTro4.chr19 59981806 881 + 63644993 GAGAACAAA-AG-------------CTCCCGGCCGCCGGCTTTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGGTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCAGGTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCTCTCGTCGTACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCTAGACACTCAGGGATGGG-----CCAGCCCATTAGAGTAAGCATTCGGCCACC-TCTCGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGtctcacacctcacttcctccggccagccacacccctgcagatttaacccgccagcctccctaagg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaatctcagatgctgcctcctt-----------ccctgaccaccctccctgaagcagccgcacctgcctgctcctagtgactctgttccttcacc----tgtttcgtttcctccacagggtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacctactaagatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i panTro4.chr19 M 1933 C 0 s ponAbe2.chr19 56935336 879 + 60714840 GAGAACAAACAG-------------CTCCTGGCCGCC-GCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACTCCTTTCAGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCTCTCATCGCACACTTAGAGCTGCC---TGTTTTCCTTCCTTCCTTAAGCGAGCTGGGAACTCTAGACACTCAGGCTTGGG-----CCAGCCCATTAGAGTAAGTATTCGGCCACC-TCTTGACCGCTAAGGTCACTGCTGCTGTCACCATCAACAT-------GACTGTCTCACACCTCACTTCCTCCGGCCAGCCACACCCCTGCAGAATTCACCCGCCAGCCTCCCTGAGg--tttcccctgcctgaaatcctctccacattcctggctcattctcgaaattgaggtcaaagctcagatgccacctcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctgctcctagtcactcagttccttcacc----tgtttcgtttcctccacagcatttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccatcacacccactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattatccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404329 882 - 106955855 GAGAACAAACAG-------------CTCCTGGCCGCCAGCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTTCGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGACTGTTC---TCAGAGGAATGCCCAGGAAAAACCTACCCGAACCCCTTTCAGCTGGGAAGGGGACCCACCTGGGCTTCCT---CACTGCCGATGAGACCTCCCCCATCGCACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCCAGACACTCAGGCTTCGG-----CCAGCCCATTACAGTAAGCATTCGGCCACC-TCTCGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGTCTCACACCTCACTTCCTCCGGCCAGCCACACCCCTGCAGATTTAACCCGCTAGCCTCCCTAAGg--tttcctctgcctgaaatcctctccgcgttcctggctcattctcgaaattgaggtcaaagctcagacgccgcctcctt-----------ccctgaccaccctacctgaagcagccgcacctgcctgctcctagtcactccgttccttcacc----tgtttcgtttcctccacagcgtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatctcacaagggctggggtttcatctttctcctccc-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacagtcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712346 844 + 64156825 GAGAGCAAACAG-------------CTCCCGGCCGCCGCAGGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAATCTACCTGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCCCTCATCGCACGCTTAGAGCTGCC-TGCATTTTCCTTCCTTCCTCAAGCGGGCTGGGAAGTCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCATCTCACACCTCACGTCCTCCGgccagccacactcctgcacatttaagccgccagcctccctaagg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaa--------accgcctcctt-----------ccctgaccaccctatctgaagcag-----------------------------cccttcacctc--tgtttcgtttcctctacagcgtttactacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtgtctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactacgtcactttgggattttgcataggacactcccagtgcttagaatctcaattgttgcttcattgtccttggcaaactcctattcatcctttaaaaccccatccatttatcccttaaccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870527 870 + 59248254 GAGAGCAAACAG-------------CTCCCGGCCGCCGCAGGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAATCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCCCTCATCGCACGCTTAGAGCTGCC-TGCATTTTCCTTCCTTCCTCAAGCGGGCTGGGAAGTCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACACCCCTGCACATTTAAGCCGCCAGCCTCCCTAAGg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaa--------accgcctcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctactcgtagtcactccgtcccttcacctc--tgtttcgtttcctctacagcgtttactacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaagggctggggtttcatctgt---ctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctACTACGTCActttgggattttgcataggacactcccagtgcttagaatctcaattgttgcttcattgtccttggcaaactcctattcatcctttaaaaccccatccatttatcccttaaccaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959279 875 + 51301725 GAGAGCAAACAG-------------CTCCCGGCCGCCGCCagtct--c---------------cctcctcttcctg---ccaGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCAATGAGACCTCCCTCATCGCACGCTTAGAGCTGCc-tatgttttccttccttcctcaagcGGGCTGGGAAGTCTAGGGACTCAGGCTTGGG-----CCAGCCCATTAGCTTAAGCATTCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACGCCCCTGCACATTTAAGCCGCCAGCCTCCCTAAgg--tttcctctgcctgaaatcCTCTCTGCATTCCTGGCTCATTCTCGAAATTGAGGTCAAA--------ACCGcctcctt-----------ccctgaccaccctatcTGAAGCAGCCGCACCTGCCTACTCGTAGTCACTCCGTCCCTTCACCTC--TGTTTCGTTTCCTCTACAGCGTTTACTACAATCTGAAAGTCTTATTCACATAGGTGTCTACTTGTTTATCT------CCCCAccacacccactaggatgacaATATCACAAGGGCTGGGGTTTCATCTGTCTCCTCCTACCTCTGTATCTCCAGCACATAAAACATGCTTGGCACACTGTAGGTGCTTAAGTATTTGCTACTACGTCACTTTGGGATTTTGCATAGGACACTCCCAGTGCTTAGAATGTCAATTGTTGCTTCATTGTCCTTggcaaactcctattcatcctttaaaACCCCATCCATTTATCCCTTAACCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659958 859 + 50890351 GAGAGCAAACAG-------------CT-CCGGCCGCCGCAAGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCGGACCCACCCTCCCTGTACCACAAGTGCCTCTCCCTGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACACCCAGGAAAAACCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACAGTTGATGAGACGTCCCTCATCGCACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTTCCT---------------TCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCATCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACACCCCTGCACATTTAACCCGCCAGCCTCCCTAAGG--TTTCCTCTGCCTGAAATCCTCTCCGCATTCCTGGCTCATTCTCGAAATTGAGGTCAAA--------ACCGCCTcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctactcgtagtcactctgtcccttcacctctgtgtttcgtttcctctacagcgtttaccacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaggggctggggtttcatctgtctcctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactatgtcactttgggattttgcataggacactcccaatgcttagaatgtcaattgttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68856 844 + 138250 GAGAACAAACAG-------------CTCCCGCCCGGCGACAGCCT--CCCTCCTCCACCGCCTCCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTC---------------CCTCTCCCCGCACCCTCGCCAGGGCTGGCTGGTC---TCAGAGGAACGCCTAGGAAAAACCCACCCAAACCCCTTTCAGTTAGGAAGGGGACACACCTGGGCTTCCTGAACGCTGCCGATGAGACCTCTCTCATCGCA--GTTAGAGCTGCC---------------------AGACAATCTGGGAACCCTAGAAACTGAGGCTTGGG-----CCAGCCCATTAGAGTCAGCACTCAGCCACCCTTCCGGCTGCTGCCGCCA---GTGCTGTCACCATCAGCGT-------GACTGTCACACACCTCACTTCCTGCGGCCAGCCGCACCCCTGCAGATTTAACCCGCCAGCCTCCCCAAGg--tctccttcgcctgaaatcctctccgcattcctggc---ttctcaaaattcaggtcaaagctcagatgccacctcctc-----------ccctgaccaccctccctgaagtggctgcacctgcctgctcctagtcactccatcccttcacctc--tgttctgtttcctccacagcgtttaccacagtctgaaagtcttattcatgtaggtgtctacct-tttatct-------cccaccacacccagtaggatgacagtatcacaaaggctggggtttcatctgtctcctcct-cctct--------------taaaacatgcttggcgtgtggtaggtgcttaagtatttgctACTACGTCActttgggattttgaatagaacactcccaatgcttagaatgtcaatctttgcttcactgtccttggcaaactcctattcatcctatgaaaccccatcaatttatcccttaatcag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20144938 829 - 122678785 GAGAACAAACAGCCTCGCTCTCAACCTCCCTACCCACCCCCTTCTGCC---------------CCTCCCCCGCCAGGCACCTGGCGGGTTCTCAGACCCACCCTCCTTGGGTCACA-------------GTGCCTGCTCTGGGGCAGGCAGGCCCATCCCCAGATCTGCACGGAAACACCTCACCCA---CCCTTCC------------------TCTGGGCTTCCC---CACAGCC---------------------CATTCAGGGCAGCCTTGAGTTTGTGACACCTCCCCAGCC----------------AGACTCAGGCTCAGGATGACCCCATCCACCCACGCTGGAGTTTGGCCACCCTCTTGTTTGCTATTGCCA---TAGTTGTCACCGTGACAGTCCTGGTAGCCAGTCTCCAGCCTGACATGCTCTGGccagacacaaccctacaggcctcacctgccagcctccccaaggtattccttctgcccagaaccctctctgcattcctgactcattcttgaaattcaggtcaaagctcagatgccacctcctcactgaggccagccctgacta-cctctctgaagtgactatacctgcttgccctcagtagccccatctcttcacctt--ggttttatgtcctccatggc----accac-------aagtcttcctcatggatgtgcttaccagtttaccttctgtctcccaccacacccgccagggcaacaataacacaagggcagggcttttgtctgtccagtgct-c-------------------agaacgtgcttggaacaaagtcgg----cATGTATTTGCTACTATGtgactttgggactttgcaaatgctactatcaatgcttagactgtcatcccttgctgcattgtccttgggaaactcctatttatccttcagaaccctctccagttatcacTCAACTGG i canFam3.chr1 C 0 I 483 a score=544796.000000 s hg38.chr19_GL949748v2_alt 1050041 180 + 1064304 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTACGGCACACATTTTGTCTCAGGAGCTACGTattgaataaataaat s panTro4.chr19 59982687 180 + 63644993 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTACGGCACACATTTTGTCTCAGGAGCTACGTATTGAATAAATAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936215 180 + 60714840 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAGGCACACATTTTGTCTCAGGAACTACGTATTGAATAAATAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405211 180 - 106955855 gaaaggcttctgtgcctcatacaaccaccgataaagctggattagggctttctctggggacac-ccctgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAGGCACACATTTTGTCTCAGGAAATACGTATTGAATAAATAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713190 180 + 64156825 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacac-acatgccctgtgacacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTATTGAATGAATGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55871397 180 + 59248254 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacac-acatgccctgtgacacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTattgaatgaatgaat i macFas5.chr19 C 0 I 312 s papAnu2.chr19 47960154 180 + 51301725 GAAAGGCTTCTGTGTCTCATACATCCACCCATAAAGCTGGATTAGGGCTTTCTCTGGGGACAC-ACATGCCCTGTGACACACTTCCATTAGTGCACATATCCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTAcgtattgaatgaattaat i papAnu2.chr19 C 0 I 306 s chlSab2.chr6 47660817 180 + 50890351 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacat-acatgccctgtgccacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTATTGAATGAATGAAT i chlSab2.chr6 C 0 I 306 s calJac3.chr22_GL285922_random 69700 186 + 138250 aaaaggctcctgtgcctcatactatcaaccataaagccagattagggctttctctggggatacaccttgccctgaaccacacttccattagtgtacatat-ctccatgaattatgattgtGCACACCAGCAGGGTCTAGAGTGAGGTACCAATTTTGTGTCAGGAACTATGTATTGAATGAATAAAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=31004.000000 s hg38.chr19_GL949748v2_alt 1050221 14 + 1064304 taattacttttttt----------- s panTro4.chr19 59982867 13 + 63644993 TA-TTACttttttt----------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936395 14 + 60714840 TAACTACttttttt----------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405391 14 - 106955855 TAACTACttttttt----------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713370 14 + 64156825 TAATTACTTTTTTT----------- i rheMac3.chr19 C 0 I 343 s macFas5.chr19 55871889 14 + 59248254 TAATTACttttttt----------- i macFas5.chr19 I 312 C 0 s papAnu2.chr19 47960640 14 + 51301725 taattacttttttt----------- i papAnu2.chr19 I 306 C 0 s chlSab2.chr6 47661303 14 + 50890351 TAATTACttttttt----------- i chlSab2.chr6 I 306 C 0 s calJac3.chr22_GL285922_random 69886 21 + 138250 ----TACtttttttttttttttttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=88516.000000 s hg38.chr19_GL949748v2_alt 1050235 35 + 1064304 gagacaaggtcttgctctgtcacccaggctggagt s panTro4.chr19 59982880 35 + 63644993 gagacaaggtcttgctctgtcacccaggctggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936409 35 + 60714840 gagacaaggtcttgctctgtcaccctggctggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405405 35 - 106955855 gagacaaggtcttgctctgtcacccaggctggagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55871903 35 + 59248254 gagacaaggtcttgctctgtcgcccaggctggagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960654 35 + 51301725 gagacaaggtcttgctctgtcgcccaggctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661317 35 + 50890351 gagacaaggtcttgctctgtcacccaggctggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 69907 35 + 138250 gaaacaagatcttactctgtcacccaggctggagt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I e rheMac3.chr19 60713384 343 + 64156825 I a score=787462.000000 s hg38.chr19_GL949748v2_alt 1050270 262 + 1064304 gcagtggtgcaatcgtggctcactgta-ccttgacctcccaggttcaagcaatcctcccacctcagcctcccaagcagctaggaccacagatgcaggccactatgcctggctaatttttaattttttttttggtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctctgcttcccaaagtactgggactataggtgtgagacgccacactcagcctcattatttaat s panTro4.chr19 59982915 261 + 63644993 gcagtggtgcaatcgtggcttattgta-ccttgacctcccaggttcaagcaatcctcccacctcagcctcccaagcagctaggaccacagatgcaggccactatgcctggctaatttaaaattttttttt-ggtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtactgggactataggtgtgagacaccacactcagccTCATTGTTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936444 262 + 60714840 gcagtgatgcaatcgtggctcactgtagccttgacctcccaggatcaagcgatcctcccacctcagcctcccaagcagctaggatcacaaatgcatgccactatgcctggctaatttttaaatttttttt-tgtagggatggaatctccctatgttgcccaagctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtactgggcctataggtgtaagacaccacattcagccTCATTATTTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405440 261 - 106955855 gcagtggtgcaatcatagctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagctaggaccacaaatgcatgccactatgcctggctaatttttaaatttttttt--gtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctctagggatcctcctgcctccgcttcccaaagtactgggactataggtgtgagacaccacagtcagccTCATTATTGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713727 261 + 64156825 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactgtgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgccTCATTATTTAAT i rheMac3.chr19 I 343 C 0 s macFas5.chr19 55871938 261 + 59248254 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactgtgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgcctcattatttaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960689 261 + 51301725 gcagtggtgcaatcatggctcactgtagccttgaattcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactacacctggctaattttaaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacaTCACACTCTGCGTCATTATTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661352 261 + 50890351 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactatgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgccTCATTATTTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 69942 261 + 138250 gcagtggtgcaatcacagctcactgcagccttgccctcccaggctcaagcaatcctcccacctcagtctcccaagtagctagaaccacaagtgcgtgccactatgcctggctaatttttagatttcttaa--gtagagatggaatctccctatgctgcccaggctggtttcaaactcctaggctcaagtgatcctcctgccttagcttcccaaagtactgggactataggtgtgagccaccacactcagccTAATTATTTCAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=370754.000000 s hg38.chr19_GL949748v2_alt 1050532 108 + 1064304 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCC-ATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCCTCAGCTCCCATTGCCAGGGAATCTGACCTTTCTCC s panTro4.chr19 59983176 109 + 63644993 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCTTCAGCTCCCATTGCCAGGGAATCTGACCTTTCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936706 109 + 60714840 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCACCTTCTCAAGAACATGCCTCAGCTCCCATTGCCGGGGAATCTGACCTTTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405701 109 - 106955855 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCCTCAGCTCCCGTTGCCAGGGAACCCGACCTTTCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713988 109 + 64156825 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTACAACCTTCCCCCTTCTCAAGAGCATGCCTCAGCTCCCATTGGCAGAGAATCTGACCTTTCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55872199 109 + 59248254 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCATTGGCAGGGAATCTGACCTTTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960950 109 + 51301725 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCATTGGCAGGGAATCTGACCTTTCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661613 109 + 50890351 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTGATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCACTGGCAGGGAATCTGACCTTTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70203 109 + 138250 ATGTAAGTAGCTTTATCGCTCTGAGACCCAGTCCCCATCTAATTTATAACCTCCCCGCTTCTCAAGAACGTGCTTTAGCTCCCATTGTCAGGGTATCTGACCTTTCTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20146250 101 - 122678785 ATGTAAATAAGTATATCTTCCTGAGACCCAGCTCCCACCTTATTTATATCTGCCCCCC--------AAACTGCCATATCTCCTATTTCCTGTGCCTGTGACTGTCCACC i canFam3.chr1 I 483 I 9 a score=391103.000000 s hg38.chr19_GL949748v2_alt 1050640 134 + 1064304 TTGTC-ATAGGAt------tttttttttttttt----gagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcccgggttcaagtgattctcctgcctcagtctccctagta s panTro4.chr19 59983285 138 + 63644993 TTGTC-ATAGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcgcccagcctggagtgca-tggcacaat---ggctcgctgcaacctctgcctcccgggttcaagtgattctcctgcctcagtctccctagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936815 138 + 60714840 TTGTC-ATAGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcccgggttcaagcaattctcctgcctcagtctccctagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405810 138 - 106955855 TTGTC-ACGGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcctgggttcaagcaattctcctgcctcagtctccctagta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60714097 138 + 64156825 TTGTC-ATAGGAA------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaccctctgcctcccaggttcaagcgattctcctgcctcagtctccctagta i rheMac3.chr19 C 0 I 427 s macFas5.chr19 55872308 136 + 59248254 TTGTC-ATAGGAA--------ttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaccctctgcctcccaggttcaagcgattctcctgcctcagtcgccctagta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47961059 144 + 51301725 TTgtc-ataggaattttttttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaacctctgcttcccaggttcaagtgattctcctgcctcagtctccctagta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661722 133 + 50890351 TTGTC-ATAGGAA-----------tttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcactgcaccctctgcctcccaggttcaagtgattctcctgcctcagtctccctagta i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70312 141 + 138250 TTGTCGATAGGAA--------ttttttttttttttttgaaacagaatctcactcagtcacccagcctggagtgcagtggcatgatctcggctcactgaaacctctgcctcctggtttcaggcaattctcctgcctcagctttcctagta i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20146351 9 - 122678785 I a score=332129.000000 s hg38.chr19_GL949748v2_alt 1050774 146 + 1064304 gctgggactacaa--gcgcacgccaccacacccagctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggtgtgaggcaccacatccgg s panTro4.chr19 59983423 146 + 63644993 gctgggactacaa--gcgcacgccaccacacccagctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggtgtgaggcaccacacccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936953 146 + 60714840 gctgggactacaa--gtgcacgccaccactcccgtctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgtgaggcaaaacacccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405948 146 - 106955855 gctgggactacaa--gtgcacgccaccacacccggctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactccagatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggcgtgaggcaccacacgcgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55872444 148 + 59248254 gctgggactacaagtgcgcacgccaccacacccggctacttttgtagagatagcatttcaccgtgttggctaagctggtcttgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgcgaggcaccgcacccgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47961203 148 + 51301725 gctgggactacaagtgcgcacgccaccacacccggctacttttgtagagatagaatttcaccgtgttggctaagctggtcttgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagCAGGTGCgaggcaccgcacctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661855 146 + 50890351 gctgggactacaa--gcgcacgccaccacacccggctacttttgcagagatagcgtttcaccgtgttggctaagctggtctcgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgcaaggcaccgcacctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70453 157 + 138250 gctgggactacag--gcgcacatcaccacacctggatacttttgtagagacagggtttcaccatgttggccaggctggtcttgaactcctgatctcaagtgatccacccacctgaacctcccaaaatgctgggtaacaggcatgagccactgcacccag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20146351 9 - 122678785 I e rheMac3.chr19 60714235 427 + 64156825 I a score=447029.000000 s hg38.chr19_GL949748v2_alt 1050920 200 + 1064304 cTGTCATAGGAATTTGTCAGCAAATCCTACAGACTAGAGGATGTGTGTTGGGTGGTG----TGGGGGTGGGGATAACGGAGGAGATGGGG------------------------GG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGGAAGAAAGGCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGG-ACAGAGGCAA s panTro4.chr19 59983569 200 + 63644993 cTGTCATAGGAATTTGTCAGCAAATCCTACAGACTAGAGGATGTGTGTTGGGTGGTG----TGGGGGTGGGGATAACGGAGGAGATGGGG------------------------GG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGAAAGAAAGGCCAG-CCCCCCAAGAC--AGCTATCCTAGACTGGG-ACAGAGGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937099 202 + 60714840 ctGTCATAGGAATTTGTCAGCAAATTCTACAGACTAGAGGATGTGTGTTGGGTGGTA----TGGGGGTGGGGATAACGGAGGAGATGGGG-----------------------AGG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGGAAGAAAGGCCAACCCCCCCAAGAC--AGCTATCCCAGACTGGG-ACAGAGGCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103406094 200 - 106955855 cTGTCATAGGCATTTGTCAGCAAATCCTACAGACTAGAGGGCGTGTGTTGCATGGTG----TGGGGGTGGGGATAACGGAGGAGATGGG-------------------------GG---TG----ACCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCATTCCTGGGACATCCCAGGTGAGAGGGAAGAAAAGCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55872592 205 + 59248254 cTGTCATAGGAATTTGTCAGCGAGTCCTACAGACTGGAGGTTACGCGTGGGGTGGTG----TAGGGGTGGGGATAACGGAGGAGATGGGGG--------------------AGGGG---TG----AACTCTTCAAGCCCCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGAAGAAAGTCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i macFas5.chr19 C 0 I 477 s papAnu2.chr19 47961351 205 + 51301725 ctgtcATAGGAATTTGTCAGCAAATCCTACAGACTGGAGGTTACGCGTGGGGTGGTG----TAGGGGTGGGGATAACggaggagatggggg--------------------agggg---tg----aACTCTTCAAGCCCCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGTAGAAAGTCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i papAnu2.chr19 C 0 I 479 s chlSab2.chr6 47662001 205 + 50890351 cTGTCATAGGAATTTGTCAACAAATCCTACAGACTGGAGGTTACGTGTGGGGTGGTG----TAGGGGTGGGGATAACGGAGGAGATGGGGG--------------------AGGGG---TG----AACTCTTCAAGCCTCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGAAGAAAGTCCAG-CCCCTCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i chlSab2.chr6 C 0 I 478 s calJac3.chr22_GL285922_random 70610 223 + 138250 cTGTCATATGAATTTATTAGCAAATCCTACGGACTGGAGGATATGTGTTGG--GGT-------GGGGTGGGGATAAGAGAAGAGATGGGAATGGTTTCAAACATGACACTCGGGGG---AGTCTCAGCTCTTCAAGCCCCAGTGGGGAATTCTGTTCCATTTCGGGGACCTCCTAGGTGAGAGGAAAGAAAGTCCAG--CCCCCATGAC--AGCTATCCCAGACTGGGCATAAAGGCAA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20146360 231 - 122678785 CCATCCTAGGAATTCATCAGCAAACCCTACA-ACTGGGGAGT-CGGGCTGAGCTGTGTGTTTGGCAAGGAGGAGAAGGAAAGAGGTGGGG-TGCTTTTAGAGATGATATATGGGGAATCTG----AGCTGATCAGGCTCCAGTGGGGAATTGTGTGTGCTGCTGGGGCTCCTCCAACCCAGAGAATAAACAATCCAA-TCGCCAATGACAAAGCTATCCGAGTTTTGGGACAGAAGCAG i canFam3.chr1 I 9 C 0 e rheMac3.chr19 60714235 427 + 64156825 I a score=1198817.000000 s hg38.chr19_GL949748v2_alt 1051120 365 + 1064304 ACCCTGA-CCACAGAGCCCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGG-AGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGGACTTGGGTGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT s panTro4.chr19 59983769 358 + 63644993 ACCCTGA-CCACAGAGCTCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGG-AGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGACTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGCGGCCACAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937301 358 + 60714840 ACCCTGA-CCACAGAGCCCTGTCACTCACCCAAGAACAGGTGCCAATGGCAGAACAGCCAGGCTGAGGGGGG-AGAGAGGCGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAAGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGTGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----TCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103406294 355 - 106955855 ACCCTGA-CCACAGAGCCCTGTCATTCACCCAAGAACAGGTACCAATGACAGAATAGCCAGGCAGAGGGGGG-AGAGAGGGGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGTATTTGCTGTGGGTTACAGGGAAGGAGGGGCCTCCTTTGCGGCCAGAGA---AGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCCGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAAG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i nomLeu3.chr10 C 0 I 357 s rheMac3.chr19 60714662 359 + 64156825 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGCTGCCAATGACAGAATAGCCAGGCCGAGGGGGCAAGAGAGGTGCTTCGCTGATGGATTTCCCTGGTGCGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCTGCCTGCGccacc---cccaaagcaaggagat i rheMac3.chr19 I 427 I 6 s macFas5.chr19 55873274 359 + 59248254 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGCTGCCAATGACAGAATAGCCAGGCCGAGGGGGGAAGAGAGGTGCTTCGCTGATGGATTTCCCTGGTGCGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACTCTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAAGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCACGG----CCTGGAGG-GCTGCCTGCGCCACC---CCCAAAGAAAGGAGAT i macFas5.chr19 I 477 I 446 s papAnu2.chr19 47962035 359 + 51301725 ACCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGGAAGAGAGGTGCTTTGGTGATGGATTTCCCTGGTGAGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGcggccagagaaggaggaaagaggccCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAAGGAGAT i papAnu2.chr19 I 479 I 6 s chlSab2.chr6 47662684 359 + 50890351 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGGTGCCAGTGACAGAATAGCCAGGCCAAGGGGGGAAGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGAGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACCGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAAGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGA----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAAGGAAAT i chlSab2.chr6 I 478 I 6 s calJac3.chr22_GL285922_random 70833 339 + 138250 ACCCTGA-ACACAGAGCCCTGTCACTCACCCAGGAACAGGAGCT-GTGACAGAATAGCCAGGC----GGGGG----GAAGTTCCTCAGTGATGGGTCTCCCTGGTGAGTTGCCAAGATAGGGCTTCGCTGCCTCCGCCCTGGACCGGCTGAGTCACACCGTGCAGGGGTGGACACTGTGC----TATTTGGGAACCATGTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGTGGCCAGAGAAGGAGGAAAGA-------GGCCCTGGGACTAGGG-------TGTAGGCTCCGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTACAccacc---cccaaagcaaggaaat i calJac3.chr22_GL285922_random C 0 I 6 s canFam3.chr1 20146591 366 - 122678785 ACTCAGACCCACAGAGTCCTAAAGCTCACTTAATGAAAGG---CACTGACTATGTTGGCAGACAAGGGGTTG-AAAAGGATTCTCAGGTGGCTGGTTGCCCTGGTGAGTCTCCAAGACCAGGGTTCACTGCCTCCACCCGGGATGTACTGAGTCACGCTGTACAGGGGTGGGAGCCTCCACTGGTATTTGGGAGCCACTTGCTATGGTTTGAAGAAAGGGA-GGGCCTCCTTTGTGGCCAGAGAAGGAGGAAGGAGGCCGTGGG-CCTAGAACTAGGG-------CGGAGGCTCTGGTTTCGATCTCACCTTCTCACCTGCTGCTTCAGACCTCAGAGCACCTGAAGGCAGGGACTAGGGCACCTGTCCCTGGGCCCTG---- i canFam3.chr1 C 0 C 0 a score=178018.000000 s hg38.chr19_GL949748v2_alt 1051485 77 + 1064304 agcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccaagagtccag-------------------------------------------------------------------------------------------a-ccccagcc s panTro4.chr19 59984127 151 + 63644993 agcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccaggagtccaggcccccagcccctcctccctcagacc-----------------cagaagtccaggcccccagcccctcctccctcagacccaagagtcgaga-ccccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937659 150 + 60714840 agcccctcctccctcagacccagaag-tccaggccc-caagcccctcctccctcagacccagaagtccaggccccagcccctcctccctcagacccaggagtccaggccccaa-------------------------------------------------------------gcccctcctccctcagacccaagagtccaga-caccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407006 78 - 106955855 agctcctcctccctcagacccaggag-tccaggtcc-ccagctcctcctccctca-------------------------------------------gacccaggagtccag------------------------------------------------------------------------------------------gc-ccccagcc i nomLeu3.chr10 I 357 C 0 s rheMac3.chr19 60715027 150 + 64156825 tgcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccagaagtccagatccccagcccctcctccctcagacccagaagtccaggtccca------------------gcccctcctccctcagacccagaagtccagg-tcccagcc i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55874079 76 + 59248254 agtccctcctccctcagacccagaag-tccagg-cc-ccagcccctcctccctca-------------------------------------------gacccaggagt-------------------------------------------------------------------------------------------ccagg-tcccagcc i macFas5.chr19 I 446 C 0 s papAnu2.chr19 47962400 79 + 51301725 tgtccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccagggat------------------------------------------------------------------------------------------tccaggcccccagcc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47663049 77 + 50890351 Tgcccctcctccctcagacccaggag-tccagaccc-ccagcccctcctccctca-------------------------------------------gacccaggagt-------------------------------------------------------------------------------------------ccagg-tcccagcc i chlSab2.chr6 I 6 I 235 s calJac3.chr22_GL285922_random 71178 78 + 138250 agcccctcctcccttagacccaggag-tccagggcc-ccagcccctgcttcctca-------------------------------------------gacccaggagtccag------------------------------------------------------------------------------------------gg-ccccagcc i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20146957 77 - 122678785 ---CCCTCCTCCCTCAGACTCTGCAGATCCTGGTCCACCAGCACCTCCTCCCTCA-------------------------------------------GACCCTGGAGTCCTG------------------------------------------------------------------------------------------GC-CCCCAGCA i canFam3.chr1 C 0 C 0 a score=76335.000000 s hg38.chr19_GL949748v2_alt 1051562 19 + 1064304 cctcctccctcagacccaa s panTro4.chr19 59984278 19 + 63644993 cctcctccctcagacccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937809 19 + 60714840 cctcctccctcagacccaa i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103407084 19 - 106955855 cctcctccctcagacccaa i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60715177 19 + 64156825 cctcctccctcagacccaa i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55874155 19 + 59248254 cctcctccctcagacccaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47962479 19 + 51301725 cctcctccctcagacccag i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47663361 19 + 50890351 cctcctccctcagacccag i chlSab2.chr6 I 235 I 1 s calJac3.chr22_GL285922_random 71256 19 + 138250 cctcctccctcagactcag i calJac3.chr22_GL285922_random C 0 I 216 s canFam3.chr1 20147034 19 - 122678785 CCTCCTCCCTCAGACCTGG i canFam3.chr1 C 0 I 6 a score=29859.000000 s hg38.chr19_GL949748v2_alt 1051581 13 + 1064304 aggcctcggaccc s panTro4.chr19 59984297 13 + 63644993 aggcctcggaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937829 13 + 60714840 aggcctcggaccc i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103407104 13 - 106955855 aggccTTGGAACC i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60715197 13 + 64156825 AGGCCTCAGAACC i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55874175 13 + 59248254 aggcctcagaccc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47962499 11 + 51301725 agtc--cagaccc i papAnu2.chr19 I 1 M 905 s chlSab2.chr6 47663381 11 + 50890351 agtc--cagaccc i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 71491 13 + 138250 AGGCCTCGGACTC i calJac3.chr22_GL285922_random I 216 C 0 s canFam3.chr1 20147059 13 - 122678785 AGGTCCCTGACTC i canFam3.chr1 I 6 C 0 a score=681512.000000 s hg38.chr19_GL949748v2_alt 1051594 256 + 1064304 ATACCAAATGCTTCTATGAGATAGTTTTCTCCCCTTGTTCATGAAgaaatgagcccaggcccagtcagatctgcatctgtgtcac--agcccagggccactgtaaccttaggctactgacttccct-ctctgagcctctgttttctc--ctgtcaatg--------------------------------gggcaaggggtctgctccttCCCTCAAACCCCAACTCAGGTACAGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC s panTro4.chr19 59984310 256 + 63644993 acaCCAAATGCTTCTATGAGATAGTTTTCTCCCCTTGTTCATGAAgaaatgagcccaggcccagtcagatctgcatctgtgtcac--agcccagggccactgtaaccttaggctactgacttccct-ctctgagcctctgttttctc--ctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCTTCCCTCAAACCCCAACTCAGGTACGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937842 258 + 60714840 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCTCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTCTGTCAC--AGCCCAGGGCCACtgtaaccttaggctactgacttccct-ctctgagcctctgttttctcctctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCTTCCCTCAAACCCCAACTCAGGTAGGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407117 252 - 106955855 ACACCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCTCATGAAGAAATGA------GCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGGGCCACtgtaaccttaggctactgacttccct-ctctgagcctctgttttctcctctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCATCCCTCAAACCCCAACTCAGGTAGGGTCAAGCACAGAAAATACCTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715210 258 + 64156825 ACACCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGAGCCACTGTAACTTTCGGCTACTGACCTCCCC-CTCTGAGCCTCTGTTTTCTCCTCTGTCCATG--------------------------------GGGCAAGGGGTCTGCTCCTTCCCTCAAACACCAACCCAGGTAGGGTCAAGCACAGGAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55874188 258 + 59248254 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGCAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGAGCCACTGTAACTTTCGGCTACTGACCTCCCC-CTCTGAGCCTCTGTTTTCTCCTCTGTCCATG--------------------------------GGGCAAGGGGTCTGCTCCTTCCCTCAAACACCAACCCAGGTAGGGTCAAGCACAGGAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47663392 258 + 50890351 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGGGCCACtgtaaccttcggctactgacttcccc-ctctgagcctctgttttctcctctgtccatg--------------------------------gggCAACGGGTCTGCTCCTTCCCTCAAACCCCAACCCAGGTAAGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 71504 250 + 138250 ACACCGAGTGCATCTGTGAGGTGGTTTTCTCCACTTGCACATCAAGAAATGAGCCCAGGCCCAGTGAGATGTGCATCTGTGTCAC--AGCCCAGGGCCACtgtcacctgaggctactgacttccct-ctctgagc--ctgttttctcctctgtcagtg--------------------------------gggcaa-gggtctgctccctccctcaAACCCCAACCCAGGTAGGGTCAAGCACAG-AAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGC---- i calJac3.chr22_GL285922_random C 0 I 295 s canFam3.chr1 20147072 280 - 122678785 CTATGGAACGCCTATATGAGG---------ACATTTGCACATGAAgaag-gggcctggtctttgtcagatctgcatttgtgtcacctggcccaggtccactgtgaccttgggctagtggcctccccactctgagcctctgtcttct---gtgcccgtggacaccaatcccagcactgcctgcctcacagagAGTAAGGGGTCTGCTCCTCTCTGCAGACCCCAACCCAGGCAGGACCAAGCTCAGAAGGTACTTGTGGCACGGATGGGATAAGGACCCAGCGTGGCAGAAGTT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47962510 905 + 51301725 M a score=1008274.000000 s hg38.chr19_GL949748v2_alt 1051850 479 + 1064304 AAAGAAAGAGAAGCGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACGCACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-TC-TAGCCCCGCTGGCCACCCCTGCAGCCCCC-ATCCTTCACTCAGGCAGTTGCAGGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CAGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTATAACCTGACTTTATCCTCCCAATAAGCTGGGTGTGGTGggtggctcatgcctgtcatccca s panTro4.chr19 59984566 479 + 63644993 AAAGAAAGAGAAGTGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CC-TAGCCCCGCTGGCCACCCCTGCAGCCCCC-ATCCTTCACTCAGGCAGTTGCATGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTTATGTCCTCCCTTGCAGCATGC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTGACTTTATTCTCCCAATAAGCTGGGTGTGGTGggtggctcatgcctgtcatccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938100 497 + 60714840 AAAGAAAGAGAAGCGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACACACCAGGACCACCTGCTGGGTAGCCAAGAGCTCACAG-CC-TAGCCCCACTGGCCACCCCTGCAGCCCCC-CTCCTTCACTCAGGCAGTTGCACGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTACTGGCCTGCCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTATCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACCC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCGTTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTGACTTTATCCTCCCACCAAgctgggcgt----ggtggctcatgcctgtcatccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407369 453 - 106955855 AAAGAAAGAGAAGCATAAGGGCCCTCCTTCTA-CCCCTACCTCCCCCACCCGCTGCTGCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAGCCC-TAGCCCCGCTGGCCACCCCTGCAGCCGCC-CTCCTTCACTCAGGCAGTCTCATGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCA-----------------------GCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGC-----ACGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CGGCCTTGCGTCTCCTCTTTGCCAGATACTGTATTGACAACTC----TCTACAATCTGAGTTTATCCTCCCAATAAgctgggtat----gatggctcatgcctgtcattcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715468 456 + 64156825 AAAGAAAGAGAAGTATAAGGGCCCTCCTTCCACCCCCTACCTCTCCCACCTGCTGCTTCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CAGGAGCCCCGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCTGGAACACTCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGGCCTGC----------------------CCTCCTCCTCTA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCGTGGCAGAGCCCTTCGTGTCCTCCCTTGCACCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTCCTaataagctgggcgt----ggtggctcatgcctgtcatccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55874446 456 + 59248254 AAAGAAAGAGAAGTATAAGGGCCCTCCTTCCACCCCCTACCTCCCCCACCTGCTGCTTCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CAGGAGCCCCGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCTGGAACACTCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGACCTGC----------------------CCTCCTCCTCTA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCTGTGGCAGAGCCCTTCGTGTCCTCCCTTGCACCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTCCTaataagctgggcgt----ggtggctcatgcctgtcatccca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47663650 455 + 50890351 AAAGAAAGAGAAGCATAAGGGCCCTCCTTCCACCCCCTACCTCCCCCACCCGCTGCTTCACACACCAGGACCACCTGCCGGGTAGCCAGGAGCTCACAG-CC-TCGCCCTGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCCGGAACACCCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGGCCTGC----------------------TCTCCTCCTCGA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCGTGGCAGAGCCCTTCGTGTCCTCCCTTGCAGCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTACCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTACTaataagctgggcgt----ggtggctcatgcctatcatccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72049 429 + 138250 aaagaaagaaaAGCATAAGGGTGCTCCTTCCAACCCCCACCTGCCCCACGCCCTGCTGTACACG--AGGACCACCTACTAGGGA-CCGCAACCTAACAG-AC----GCCCACCCCCCACCCCAGCAGCCCTCCCTCCTCCACTCAGGCCGTTTCACGGCC-------CCCTT----GTCCTCTAGGATTTCACACTGGCCGTGAAGCTCGCCCTTCAAGTTGATCCCTGGCCTGC----------------------CCTCCTCCTCCA----------------------CGCAGCCTGTCCTGACCCTCAGCAGCCTC------------------CCCATCGTGGCCTCCCCTGCAGCACAC-----AGGGGAAGAAAGCCCACCACCTCC---ACCAATGCTAACGC-AGGCCTTgcatttcctctgtgcccggtgctgtgtggccaactctgtatgtacaacattacttgatcctcccaataagctgggcgc----cgtggcgcatgcctgtggt-cca i calJac3.chr22_GL285922_random I 295 C 0 s canFam3.chr1 20147352 399 - 122678785 ------------------GGACCCTCATGCCTCTCCCTACAGCTCC------CTGG----------AGAACCACCTGGGATGTGCCCAGCAGTACATGG-CC-TGGCC-----AGCTGCCCCT-----CCCC--TCCGAGGCTCAGGCAGTTATGTGgcctggaacactcctccctctccttcagg--ccacctcgggctgccaaacttgctggtctggttcagctccagctgcc----------------------cctcctcctcca----------------------ggaagcctgccctga-cctcagcagccccccctgggcttctgcagcaccctttgcatcccccatcacaccacACTATGTACGGAAGGAAAGCCCACCATCTCCACTGCTGTTGctaacactcaacctagcatctcctcattgccaggaactgtgcagagagctc----tccataacgtcatttaatcctcccaat---------gt-----------------tgtgatccca i canFam3.chr1 C 0 I 212 e papAnu2.chr19 47962510 905 + 51301725 M a score=32325.000000 s hg38.chr19_GL949748v2_alt 1052329 13 + 1064304 gcacttcgggagg s panTro4.chr19 59985045 13 + 63644993 gcacttcgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938597 13 + 60714840 gcacttcaggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407822 13 - 106955855 gcacttcgggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715924 13 + 64156825 gcactttgggagg i rheMac3.chr19 C 0 I 411 s macFas5.chr19 55874902 13 + 59248254 gcactttgggagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664105 13 + 50890351 gcactttgggagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72478 13 + 138250 gcactttgggagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M a score=30700.000000 s hg38.chr19_GL949748v2_alt 1052342 23 + 1064304 ataaggcaggagtatcacatgag s panTro4.chr19 59985058 23 + 63644993 acgaggcaggagtatcacatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938610 23 + 60714840 atgaggcaggagtatcacttgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407835 23 - 106955855 acgaggcaggagtatcacatgag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55874915 23 + 59248254 ttgaagcaggatgatcacttgag i macFas5.chr19 C 0 I 1 s chlSab2.chr6 47664118 23 + 50890351 tcaagacaggaggatcacttgag i chlSab2.chr6 C 0 I 383 s calJac3.chr22_GL285922_random 72491 23 + 138250 gcgaggcaggaggatgatttgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=41212.000000 s hg38.chr19_GL949748v2_alt 1052365 40 + 1064304 cccaggagttg---------gaga---------------ccagcctgggcaacataaggagact s panTro4.chr19 59985081 40 + 63644993 cccaggagttg---------gaga---------------ccagcctgggcaacataaggagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938633 40 + 60714840 cccaggagttg---------gaga---------------ccagcctgggcaacatagggagact i ponAbe2.chr19 C 0 I 3064 s nomLeu3.chr10 103407858 40 - 106955855 cccaggagttg---------gaga---------------ccagcctgggcaacacagggagatt i nomLeu3.chr10 C 0 I 6 s macFas5.chr19 55874939 64 + 59248254 ggcggaggttgcagtgaaccgagattatggccctgcactccagcctgggcaatagagggagact i macFas5.chr19 I 1 C 0 s calJac3.chr22_GL285922_random 72514 40 + 138250 cccaggagctg---------gaga---------------ccagcctgggcaatatagggagact i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=2296.000000 s hg38.chr19_GL949748v2_alt 1052405 3 + 1064304 cta s panTro4.chr19 59985121 3 + 63644993 cta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407904 3 - 106955855 tta i nomLeu3.chr10 I 6 C 0 s macFas5.chr19 55875003 3 + 59248254 cta i macFas5.chr19 C 0 I 345 s calJac3.chr22_GL285922_random 72554 3 + 138250 cta i calJac3.chr22_GL285922_random C 0 I 80 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=1663.000000 s hg38.chr19_GL949748v2_alt 1052408 30 + 1064304 cta-tatatatgtgta------------------------------tatatatttatatat s panTro4.chr19 59985124 60 + 63644993 cta-tctatctatctatctatctatctatctatctatctatctagctatctatctatctat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407907 31 - 106955855 ctattatatatgtata------------------------------tatatatgtatgtat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e calJac3.chr22_GL285922_random 72557 80 + 138250 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=180.000000 s hg38.chr19_GL949748v2_alt 1052438 1 + 1064304 a s panTro4.chr19 59985184 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407938 1 - 106955855 a i nomLeu3.chr10 C 0 I 115 s calJac3.chr22_GL285922_random 72637 1 + 138250 g i calJac3.chr22_GL285922_random I 80 C 0 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=86662.000000 s hg38.chr19_GL949748v2_alt 1052439 109 + 1064304 gtctgagatgggaggatcaccccagtaggtcgagactgcagtgagctgtgattatgacactgcattctagcctgggccacagaactagaccttgtctcaattaag--aaaa s panTro4.chr19 59985185 111 + 63644993 gtctgagatgggaggatcaccctagtaggtcgaggctgcagtgagctgtgattatgacactgcattccagcctgggccacagaactagaccttgtctcaattaagaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941737 110 + 60714840 gtctgagaggggaggatcactccagtaggtcgaggctgcagtgagctgtgattatgacactgcattctagcctgggccacagaaagagaccttgtctcaattaaa-aaaaa i ponAbe2.chr19 I 3064 C 0 s nomLeu3.chr10 103408054 109 - 106955855 gtctgagaggggaggatcgctccagtaggtccaggctgcagtgagctgtgattatgacactgcattctagcctgggccacagaacgagaccttgtctcaattaaa--aaaa i nomLeu3.chr10 I 115 C 0 s calJac3.chr22_GL285922_random 72638 109 + 138250 gtctgagacgggaggatcgccccagtacgtcaaggctgcagtgagctgagattatgacactgccttctaacctgggccacagaatgagaccctgtctcaaaaaag--aaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=2548.000000 s hg38.chr19_GL949748v2_alt 1052548 1 + 1064304 a s panTro4.chr19 59985296 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941847 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408163 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716348 1 + 64156825 a i rheMac3.chr19 I 411 C 0 s macFas5.chr19 55875351 1 + 59248254 a i macFas5.chr19 I 345 C 0 s chlSab2.chr6 47664524 1 + 50890351 a i chlSab2.chr6 I 383 C 0 s calJac3.chr22_GL285922_random 72747 1 + 138250 a i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M a score=3276.000000 s hg38.chr19_GL949748v2_alt 1052549 1 + 1064304 a s panTro4.chr19 59985297 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941848 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408164 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716349 1 + 64156825 a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875352 1 + 59248254 a i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664525 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72748 1 + 138250 a i calJac3.chr22_GL285922_random C 0 I 1088 s canFam3.chr1 20147963 1 - 122678785 a i canFam3.chr1 I 212 C 0 e papAnu2.chr19 47962510 905 + 51301725 M a score=57530.000000 s hg38.chr19_GL949748v2_alt 1052550 25 + 1064304 aatggggataataggacccattcca s panTro4.chr19 59985298 25 + 63644993 aatggggataataggacccattcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941849 25 + 60714840 aaTGGGGATAATAGGACCCATTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408165 25 - 106955855 aaTGGGGATAATAGGACCCATTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716350 25 + 64156825 aatggggataagaggacccattcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875353 25 + 59248254 aatggggataagaggacccattcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664526 25 + 50890351 aatggggataagaggacccattcca i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20147964 25 - 122678785 aagggggataatggaatccgtttca i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e papAnu2.chr19 47962510 905 + 51301725 M a score=1135854.000000 s hg38.chr19_GL949748v2_alt 1052575 442 + 1064304 taggatgtggtgaggattaTGCAT--acacacacacaca------cacaca------cacacacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAAGTATCTCcaaaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCGAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGGCTCACTCAGCATAGACCGTGGAGGCAACATATCTTGAATGAAGCAACAAAGCAGTAATGCACATGAATGCACCAAATGCCAAAAGCtcgtttactcaacaagtatctctccaacactttctatgtgctagacccaattctgtgtgctgcagattaagtggaggactgatcacacaaaaatctttgccctt-gtgaagcttgca-tttt s panTro4.chr19 59985323 441 + 63644993 taggatgtggtgaggattaTGcatacacacacacacaca------cacaca------cacacacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAACTATCTCCAAAATGATCaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACCATGGAGGCAACATATCTTGAATGAAGCAACAAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcgttcactcaacaagtatctctccaacactttctatgtgctagacccaattccatgtgctgcagattaagtgggggactgatcacacaaaaatctttgccctt-gtgaagcttgca----t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941874 445 + 60714840 TAGGATGTGTTGAGGATTATGcatacacacacacacaca------cacaca------cacacacaTTTATGATGTACtg---agaagatataagcacac------------------aataagtatctccaaaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGCCTCACTCACCATAGACCGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATAAATGCACCAAATGCCAAAAGCttgttcactcaacaagtatctctccaacactttctatgtgctagaaccaattccgtgtgctgcagattaagtgggggactgatcacacaaaaatctttgccctt-gtgaagcttgcattttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408190 436 - 106955855 TAGGATGTGTTGAGCATTATGcat----acacacacacg------cacaca------cacgcacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAAGTATCTCcagaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tcCCTTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAACGTGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACCATGGAGGCAACGTATGTTGAATGAAGCAATGAAGCAATAATGCACACGAATGCACCAAATGCCAAAAGCtcgttcactcaacaagtatctctccaacactttctatgtgctagacccaattccgtgtgctgcagattaagtgggggactaatcacacaaaaatctttgccctc-gtgaagcttgct----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716375 449 + 64156825 taggatatggtgtggattaTGcacacacacacacacaca--cgcacacgca------cacacacaTTTATGATGTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATGCagtggcaaagccaggattcagacccacacctgcccaaGGCTCTCTGCCGTCAGACCACACTATA--------TCTCTTTCTCTCTGTTCCTTCATTCCCATCAATCTAAGGCAAAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacttcctgtgtgctagacccaattccgtgtgctgcagactaagtcggggactgaccacacaaaaatctttgccctt-gtgaagcctgca----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875378 447 + 59248254 taggatatggtgaggattatgcacacacacacacacaca----cacacgca------cacacacatttatgatgtactgagaagaagatataagcacac------------------aataagtatctccaaaattatgcagtggcaaagccaggattcagacccacacctgcccaaggctctctgccgtcggaccacactata--------tctctTTCTCTCTGTTCCTTCATTCCCATCAATCCGAGGCAAAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacttcctgtgtgctagacccaattccgtgtgctgcagactaagtcggggactgaccacacaaaaatctttgccctt-gtgaagcctgca----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47963447 453 + 51301725 TAGGATATGGTGAGGattatgcacgcacacacacacacacacacacacgca------cacacacatttatgatgTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATgcagtggcaaagccaggattcagACCCACACCTGCCCAAGGCTCTCTGCCGTCAGACCACActata--------tctctttctctctgttccttcATTGCCATCAATCCAAGGC-AAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGctcattcactcaacaagtatCTCTCCAACA-TTCCTGTGTGCTAGACCCAATTCCATGTGCTGCAGATTAAGTAGGGGACTGACCACACAAAAATCTTTGCCCTT-GTGaagcctgca-tttt i papAnu2.chr19 M 905 C 0 s chlSab2.chr6 47664551 453 + 50890351 tagggtatggtgaggattaTGcacacacacacgcacgca--cacacacgcacgcacgcacacacaTTTATGATGTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATGCagtggcaaagccaggattcagacccacacctgcccaaGGCTCTCTACCGTCAGACCACACTATA--------TCTCTTTCTCTCTGTTCCTTCATTCCCATCAATCCAAGGC-AAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacgtcctgtgtgctagacccaattccgtgtgctgcagattaagt-agggactgaccacacaaaaatctttgccctt-gtgaagcttgca----- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20147989 412 - 122678785 taggatgctgtgaggattagatgtgcgcacagacaagca---------gcg---------------------tgtactcagaagaaggcagaagcacacccacagtaggtattgagtaatgagtattatCAACACTGTTTAATGGC--AGTCAGAACCTGAACCCACACCCACCTG-GGCTCTCTGCCATCACACCACACCATATGATCGTCTCTCTTTCCCTCTACTCTTTCATCCCTGTCAGCCCAGGAC--AAAGGTGTGCTTTCTCTGGTTTCCAGCCTCCTTCGGCATAGACTATGGGGTTAACGTGTGGTGAACAAAACAATGGAGCA-TAATATATATGAATGCACCAAGGG--------------------caaatatcattccagcacttactgta----------------atgtgcagcag----agtgcagggctgaacgcacagatgtctttgtctttcgtgaaacttaca-ttct i canFam3.chr1 C 0 I 626 e calJac3.chr22_GL285922_random 72749 1088 + 138250 I a score=406113.000000 s hg38.chr19_GL949748v2_alt 1053017 204 + 1064304 tttttttttttttttgagatggagtcttgctctgtcacccaggctggagtgcagtggagca---atcttggctcactgcaatctccacctcccgggttcacgccattctcctgcctcagcctccggagtaggtgggactacaggcacccaccaccaagcctggttaattgttttgtatttttagtagagacggggtttcaccatgtt s panTro4.chr19 59985764 204 + 63644993 tttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggagcg---atcttggctcactgcaatctccacctcctgggttcacgccattctcctgcctcagcctccggagtaggtgggactacaggcacccaccaccaagcctggttaattgttttgtatttttagtagagatggggtttcaccatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942319 203 + 60714840 tttttttttttttttgagacagagtattgctctgtcacccaggctggagtgcagtggtgcg---atctcggctcactgcaagctccgcttcccaggttcctgccattctcctgcctcagcctccggagtagctgggactacaggcgcccgccaccatgcccggctaatt-ttttgtattgttagtggagacggggtttcaccgtgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408626 200 - 106955855 ----tttgtttttttcagacagagtctcactctgtcgcccaggctggagtgcagtggcgcg---atcttggctcactgcaagctccgcttccctggttcccgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccaccaccaagcccagctaattgttttgtatttttagtacagacagggtttcaccgtgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716824 204 + 64156825 --tttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatcttggctcactacaacctccacctcccaggttcaagcaactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i rheMac3.chr19 C 0 I 3342 s macFas5.chr19 55875825 204 + 59248254 --tttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatcttggctcactacaacctccacctcccaggttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47963900 206 + 51301725 tttttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatctcggctcactacaacctccacctcccaggttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47665004 206 + 50890351 ttttttttttttttttggatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatctcggctcactacaacctccacctcccaggttcaagcaactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-ttttgtatttttagtagaaatggggttttatcatgtt i chlSab2.chr6 C 0 I 1847 e canFam3.chr1 20148401 626 - 122678785 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I a score=74060.000000 s hg38.chr19_GL949748v2_alt 1053221 83 + 1064304 agccaggatggtctca----------------atctcctgacctc--gtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccacc s panTro4.chr19 59985968 83 + 63644993 agccagggtggtctca----------------atctcctgacctc--gtgatccacacgccttggcctcccaaagtgctgggattacaggcgtgagccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942522 83 + 60714840 agccagaatggtctcg----------------atctcctgacctt--gtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacc i ponAbe2.chr19 C 0 I 378 s nomLeu3.chr10 103408826 83 - 106955855 agccaggatggtatcg----------------atctcctgacctc--gtgatccgccggcctcggcctcccaaagtgctgggattacaggcgtgagccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876033 101 + 59248254 ACgtggtgtgatctcaggtgactgcaacgtccacctcctgggttcaagtgattttcttgtctcagccccccaagaagctgggattacaggtgtgcaccacc i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47964110 101 + 51301725 acatggtgtgatctcaggtgactgcaacgtccacctcctgggttcaagtgattttcttgtctcagccccccaagaagctgggattacaggtgtgcaccacc i papAnu2.chr19 I 4 C 0 e canFam3.chr1 20148401 626 - 122678785 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=73951.000000 s hg38.chr19_GL949748v2_alt 1053304 164 + 1064304 acacccggccGCttttttttttttta----agatggagtctcgctctgtcacccaggctggagtgcagtggcacgatcatctcggttcactgcaacctccacctcccaggttcaagtgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac s panTro4.chr19 59986051 161 + 63644993 acacccggccGC---Attttttttta----agatggagtctcgctctgtcagccaggctggagtgcagtggcatgatcatctcgtctcactgcaacctccacctcccaggttcaagtcactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103408909 163 - 106955855 gcacccggccAC-Atttttttttttt----agatggaatctcgctctgtcacccaggctggagtgcagtggcgtgatcatctcggctcactgcaacctccacctcccagtttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876134 134 + 59248254 acctccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggttgg----------------------------------tctcgaactcccaacctcgagtgatccacccacctcagcctcccaaagtgctgggattacaggcatatgccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47964211 134 + 51301725 acctccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggttgg----------------------------------tctcgaactcccaacctcgagtgatccacccacctcagcttcccaaagtgctgggattacaggcatatgccac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=600.000000 s hg38.chr19_GL949748v2_alt 1053468 1 + 1064304 c s panTro4.chr19 59986212 1 + 63644993 c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103409072 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876268 1 + 59248254 c i macFas5.chr19 C 0 I 2541 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e rheMac3.chr19 60717028 3342 + 64156825 I a score=14981.000000 s hg38.chr19_GL949748v2_alt 1053469 64 + 1064304 aactctggctaatttttttt-tttttagtagaaatggggttttatcatgttggtgacatggtgtg s panTro4.chr19 59986213 61 + 63644993 aactctggctaa---ttttt-tttttagtagaaatggggttttatcatgttggtgacatggtgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103409073 65 - 106955855 aactctggctaattttttgtatttttagtagaaatgaggttttatcatgttggTGACATGGTGTG i nomLeu3.chr10 C 0 I 1689 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=20348.000000 s hg38.chr19_GL949748v2_alt 1053533 225 + 1064304 atctcggctgactgcaacctccacctccggggttcaagcaattttcttgtctcagcctcccaagaagctgggattacaggtgtacaccaccacccccggctaattttcatattttcagtagagacgtgctttcaccatgttggccaggttggtctcgaactcccaacctcaagtgatcaatccgcctcagcctcccaaagtgctgggattacaggcatgtgccac s panTro4.chr19 59986274 225 + 63644993 atcttggctgactgcaacctccacctccggggttcaagcaattttcttgtctcagcctcccaagaaactgggattggaggtgtacaccaccacccccggctaattttcatattttcagtagagacgtgttttcaccatgttggccaggctggtctcgaactcccaacctcaagtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgtgccac i panTro4.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=172517.000000 s hg38.chr19_GL949748v2_alt 1053758 709 + 1064304 cgtgcccagccTGtgaagcttgcattctaacggaggagacacagacaaaatgaaccaggaacacagtgggtaagaaggtgaaaagttctccacacaaaaatgaagtagggagagaggaaagagactacaaagaagttgggttgccgggggcggtggctcacacccataatcccagcactttgggaggccgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaatgctgtctctactaaaagtacaaaattagccgggcgtggtggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacctgggggggcggaggttgcggtgagccaagattgcgccactgcactccagcctgggcaacaagagtgaaactctgtctc-aaaaaaaacaaa----------agaagtcgagtaagggatgccgccatttgaaacagggtggtcagccagtcctctgagaaggtgacattcaggcaaagatcaaaggaggcaagaaagtgaggcatgagggtatctggt-agaagagcattccaggcagaggaaacagcaagtgcaaaggccctgaggcaggaccgggtctggatgttccaagagcagcaaggaggccagtgtgctgacacacagaaggaagagatgagatcagaATCACGTCCCTTAAGGCCTTGCAAGATGTCAGC--- s panTro4.chr19 59986499 712 + 63644993 cgtgcccagccTGtgaagcttgcattctaacggaggagacacagacaaaatgaaccaggaacgcagtgggtaagaaggtgaaaagttctccacacaaaaatgaactagggagagaggaaagagactacaaagaagttgggttgccgggggcggtggctcacacccgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaatgctgtctctactaaaagtacaaaattagccgggcatggtggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacct-ggggggtggaggttgcggtgagccaagattgtgccactgcactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaacaaa----------agaagtcgagtaagggatgccgccatttgaaacagggtggtcacccagtcctctgagaaggtgacattcaggcaaagaccaaaggaggcaaggaagtgaggcatgagggtatctggt-agaagagcattccaggcagaggaaatagcaagtgcaaaggccctgaggcaggactgggtctggatgttccaagagcagcaaggaggccagtgtgctgacacacagaaggaagagaTGAGAACAGAATCACGTCCCTTAAGGCCTTGCAAGATGTCAGCttt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47964345 709 + 51301725 cgtgcccggcctgtgaaGCTTGCATTCTAACAGAGGAGACACAGACAAAATCAACCAGGAATACAATGGGTAAGAAGGTGAAAAGTGCTCCACACAAAAATAAagtagggagagaggaaagagactaCAAAGAAGTTGggttgccaggcacggtggctcatgcctgtaatctcagcactttgggaggctgagacaggcagatcatgaggtcaagagatcgagaccatcc---------tggtgaaaccccatctctgctaaaaatacaaaattagccgggcgtggtagtgcgcacctgtagtctcagctactcaggaggctgaggcagaagaatggcttgaaccc-aagaggcggaggttgtggtgagctgagatcacaccactgcactacagcgtggccaacaagagcgaaactctgtctcaaaaagaaaaaaaaatcaaaaacaaaagtcaGGTAAGGGATGCCGCCATTTGAAACAGGGTGGTCACCCAGTC--CTGAGAAGGTGACATTCAGGCAAAGACCAAAGGAGGCAAGGAAGTGAGGCATGAGGGTATCTGGcaagaagagcattccaggcagagagaacagcaagtgcaaagccCTGAAGGCAGAACCGGGTCTTGGTGTTCCAAGAGCAGCAAGGAGGCCGGTGTGCTGACACACAGAAGGAAGAGATGAGATCAGAATCACATCCCTTAAGGCCTTGCAAGATGTCAGC--- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=546.000000 s hg38.chr19_GL949748v2_alt 1054467 1 + 1064304 t s panTro4.chr19 59987211 1 + 63644993 t i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47965054 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 73837 1 + 138250 T i calJac3.chr22_GL285922_random I 1088 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=2246.000000 s hg38.chr19_GL949748v2_alt 1054468 3 + 1064304 ttt s panTro4.chr19 59987212 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410827 2 - 106955855 -tt i nomLeu3.chr10 I 1689 C 0 s papAnu2.chr19 47965055 3 + 51301725 TTT i papAnu2.chr19 C 0 I 1203 s calJac3.chr22_GL285922_random 73838 3 + 138250 ttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=1092.000000 s hg38.chr19_GL949748v2_alt 1054471 2 + 1064304 tt s panTro4.chr19 59987215 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410829 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 73841 2 + 138250 tt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47965058 1203 + 51301725 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=-1909.000000 s hg38.chr19_GL949748v2_alt 1054473 1 + 1064304 -t s panTro4.chr19 59987217 1 + 63644993 -t i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410831 1 - 106955855 -g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720370 1 + 64156825 -t i rheMac3.chr19 I 3342 C 0 s calJac3.chr22_GL285922_random 73843 1 + 138250 a- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47965058 1203 + 51301725 I e macFas5.chr19 55876269 2541 + 59248254 I a score=5361.000000 s hg38.chr19_GL949748v2_alt 1054474 8 + 1064304 ttttcttc s panTro4.chr19 59987218 8 + 63644993 ttttcttc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410832 8 - 106955855 ttttgttt i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60720371 8 + 64156825 tttttttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966261 8 + 51301725 tttttttg i papAnu2.chr19 I 1203 C 0 s calJac3.chr22_GL285922_random 73844 8 + 138250 cgtttttg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I a score=23232.000000 s hg38.chr19_GL949748v2_alt 1054482 16 + 1064304 ttttttgagacagagt s panTro4.chr19 59987226 16 + 63644993 ttttttgagacagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942983 16 + 60714840 ttttttcagacagcgt i ponAbe2.chr19 I 378 C 0 s nomLeu3.chr10 103410841 16 - 106955855 ttttttcagacagcgt i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60720379 16 + 64156825 ttttttgagacggagt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966269 16 + 51301725 ttttttgagatggagc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 73852 16 + 138250 ttttttgagatggggt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I a score=427854.000000 s hg38.chr19_GL949748v2_alt 1054498 250 + 1064304 ctcgctctgtcgcccaggctggagtgcaatggcgcaa-tctcggctcactgcaagctccgccttccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgc-ccaccaccacgcccggctaa----------------------ttgtttgtatttttagtagagacggggtttcaccgt----------------------------------gttagcca------ggatggtctcgatctcctgacctcgtg--ttccacccgcctcggcctcccaaagtgctgggattacagg s panTro4.chr19 59987242 250 + 63644993 ctcactctgtcgcccaggctggagtgcaatggcgcaa-tctcggctcactgcaagctctgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgc-ccaccaccacgcccggctaa----------------------ttttttgtatttttagtggagacggggtttcaccgt----------------------------------gttagcca------ggatggtctcgatctcctgacctcgtg--atccacccgcctcggcctcccaaagtgctgggattacagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942999 249 + 60714840 ctcactctgtcacccaggctggagtgcagcggcgtga-tctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgc-ccgccaccacgcccagctaa----------------------tt-tttgtatttttagtagagacagggtttcaccat----------------------------------gttggcca------ggctggtctcgaactcctgacctcatg--atccgtccgcctcggcctcccaaagtgctgggattatagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103410857 249 - 106955855 ctcactctgtcgcccagcctagagtgcagtggtgtga-tctcggctcactgcaacctccgcttcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgc-ccgccaccacgcccggctaa----------------------tt-tttgtatttttagtagagacagggtttcaccat----------------------------------gttggcct------ggctggtctcgaactcctgaccccgtg--atccgcctgcctcggcctcccaaagtgctgggattacagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720395 238 + 64156825 ctcgctctgtcgcccaggctggagtgcagtggcgaga-tctcagctcactgcaagctccgcctcccgggttcacgccattctcctgccccagcctcccgagtagctggggctacaggcgc-ccacaaccgcgcccggctaa---------------------ttt-tttgtatttttagtagagacaggg-------------------------------------------gttcaccg---------tggtctcgatctcctgaccttgtg--atccgcccgcctcggcctcccaaagtgctgggattacagC i rheMac3.chr19 C 0 I 12 s papAnu2.chr19 47966285 304 + 51301725 ctggctttgttacccaggctggagtgcaatggtacaa-tattggctcattgcaacctccacctccggggttcaagtgattctcctgcctcagcctcctcactagctgggattacaggtgc-ccaccaccacgactggctaatttttgtgtttctttttttttttt-tttttttttttttttgagacagagtctcgctctgtcacccaggctggagtgtggtggccggatctcagctcactg---------caagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667057 252 + 50890351 ctcgccctgttgcccaggctggagtgcagtggtgcgattatcggctcaccgcaacctccgcctcccaggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaagtgc-ccgccaccacggccggctaa----------------------tt-tttgtgtttttagtagagatggggttttgtcat----------------------------------gttggctg------ggctggtctcgaactcctgacctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacagg i chlSab2.chr6 I 1847 C 0 s calJac3.chr22_GL285922_random 73868 251 + 138250 cttgctctgttgcccaggctggagtgcagtggtgtga-tctcagctcactgcaacatccgtttcccaggtttaagcgattctcctgcctcagcctcctgagtagctggggttacaggtgcaccaccaccacgcctggcTAA----------------------TT-tttgtatttttgtttg-------tttgttttgt----------------------------------gtttgtttttttgAGGTGaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggatgacagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I a score=24801.000000 s hg38.chr19_GL949748v2_alt 1054748 21 + 1064304 tgtgagccactgcgcccggcc s panTro4.chr19 59987492 21 + 63644993 tgtgagccactgcgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943248 21 + 60714840 cgtgagccaccgcgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411106 21 - 106955855 catgagccaccgcgcccagcc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47966589 21 + 51301725 cgcccgccacctcgcccggct i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47667309 21 + 50890351 cgtgagccactgtacgtggcc i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 74119 21 + 138250 cacgcaccaccacacccagct i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60720633 12 + 64156825 I a score=444907.000000 s hg38.chr19_GL949748v2_alt 1054769 282 + 1064304 TGttttctg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcgccgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacacctggat-aatttttgtgtttttagtacagatggggtttcaccatgttggctgggctggtctcgaactcctgtcctcaggtgatctgcctgcctcggcctcccaaagtgctgggattagagatgtga s panTro4.chr19 59987513 282 + 63644993 TGttttctg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcgccacaacctctgcctcccgggttcaagtgattttcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacacctggat-aatttttgtgtttttagtagagatggggtttcaccatgttggctgggctggtctcgaactcctgtcctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacagatgtga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943269 282 + 60714840 TGTAttttg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcaccacaacctccgcctcccgggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaggtgcccaccaccacacctggat-aatttttgtgtttttagtagagatggggtttcaccatgttggctggactggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacagatgtga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411127 283 - 106955855 TGttttttgt-tttttt-----gagatggggcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcatcgcaacctccgcctcccgggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaggtgcccaccaccacacctggat-aatttttgtgtttttagtagaaatggggtttcaccatgttggctgggctggtctcgaactcctgacctcaggtgatctacctgcctcggcctcccaaagtgctgggattacagatgtga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720645 267 + 64156825 tttttttt---tttttt-----gagacggagtctcgctctgtcgcccaggctggagttcagtggcgcga-tctcggctcactgcaagctccgcctcccgggttcacgccattctcctgccccagcctcccgagtagctgggactacatgcgcccacaaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccgtg------------gtctcgatctcctgacctt--gtgatccgcccgcctcggactcccaaagcgctgggattacaggcgtga i rheMac3.chr19 I 12 C 0 s papAnu2.chr19 47966614 248 + 51301725 ttttttttgtatttttt-agtagagacggggtttcaccgtgttagccaggatgg----------------tctcg----------------atctcctgacctcgtg--atccacccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcctaatttttgtgtttctatcagagatggggttttgccatgttggccgggccagtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctaggattaca------- i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47667331 274 + 50890351 Gtttttttg--tttctt-----gagatggagcgtggctttgttgcctaggctggagtgcaatggtacaa-tattggctcattgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctcactagctgggattacaggtgcccaccaccacggctggct-aatttttgtgtttttatcagagatggggttttgccgtgttggccaggccagtctcgaactcctgacctcagatgatccacctgcctcggcctcccaaagtgctgggattaca------- i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 74140 244 + 138250 -aatttttg--tatttttagtagagacagggtttcaccttgttgaccaggatgg--------------------------------tctcaatctcttgacctcg-----------tgatccagcctcccaaagtgctgggattataggcatgtgccaccacacctggcctaatttttgtatttttagtagagacggggttttgccatgttggcatggctggtctcgaactcctgacttcaggtgatctgcctgcctcagcctcccaaagtgctgggattccaggcatga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I a score=103735.000000 s hg38.chr19_GL949748v2_alt 1055051 56 + 1064304 gccactgta--cccA--Tgcaagtttcttaacccttctcttcctca-ttttctcatctgtg s panTro4.chr19 59987795 56 + 63644993 gccattgta--cccA--Cgcaagtttcttaacccttctcttcctca-ttttctcatctgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943551 56 + 60714840 gccactgca--cccA--Cgcaagtttcttaacccttctctgcctca-ttttctcatctgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411410 56 - 106955855 gtcactgca--cccA--CAcaagtttcttaacccttctctgcctca-ttttctcatctgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720912 58 + 64156825 gccaccgcg--cccggccgcaagtttcttaactcttctctgcctca-ttttctcatgtgta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966862 50 + 51301725 ------gca--ccCA--CGCAAGTTTCTTAACCCttctctgcctca-ttttctcatgtgta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667605 50 + 50890351 ------gCA--CCCA--CAcaagtttcttaacctttctctgcctca-ttttctcatctgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74384 45 + 138250 gcccctgtg--cGCA--CTGAAG----------CTTCTCTGCCT-G-TTTCTTCATCTGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149027 59 - 122678785 gcaaccgtaacctca--ggcaaatctcttcacccccatggggctcagtttcttcatctgtc i canFam3.chr1 I 626 C 0 e macFas5.chr19 55876269 2541 + 59248254 I a score=1109236.000000 s hg38.chr19_GL949748v2_alt 1055107 382 + 1064304 agacgaagacagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTGGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGAAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAA-TAGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGTGGAACGGGATGGGTGG----GGAGG---TAAGGGCATGAGCAGAGGCAGTGATCGTGGGCAGGAGGTGTCCATAGAAGACGGGCTGCcactggccctggagacagaaggtcagccccgggt--tcaaatccctccttaacca s panTro4.chr19 59987851 382 + 63644993 agacgaaggcagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTGGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCGGGCA-TTATCAAGCTAAATCTTAGCTTTTGTCAGAA-TGGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGCGGAACGGGATGGGTGG----GGGGG---TAAGGGCATGAGCAGAGGCAGTGATCGTGGACAGGAGGTGTCCACAGAAGACGGGCTGCcactggccctggagacagaaggtcagccccgggt--tcaaatccctccttaacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943607 376 + 60714840 agacgaagacagcctcccacccagacacactcacctcaaggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTCGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTACTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAATTGGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGGGGAACGGGA----TGG----GGGGG---TGAGGGCATGAGTAGAGGCAGTGATCACGGACAGGAGGTGTCCACATAAGACGGACTGCcactggccctggagac---aggtcagccccgggt--tcaaatccctccttaacca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411466 382 - 106955855 agacgaagacagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtgaaaagctttgctagtaacctctacagcatggagggagttCTCGAAAAGGGATTTCAGA----AAGGTTTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAA-TGGGGGG----AGTCATTGAGGGAAATTTCCAAAGGAAGGGGGAACAGGATGGGTGG----GGGGG---CGAGGGCATGGGCAGAAGCAGTGATCACGGACAGGAGGTGTCCACAGAAGACGGACTGCcactggccctggagacagaagatcagccccgggt--tcaaatccctccttaa-ca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720970 390 + 64156825 agaCTAAGACAGCCTCCCACCGAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAACTTTTGTCAGAA-TGGCAGGGGGAAGTCATGGAGGAAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGG----GGGGGTGTTGAGGGCATAGGCAGAGGCAGTGACAACGGACAGGAGGTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccccgggt--tcaaatcctcccttagcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55878810 390 + 59248254 agactaagacagcctcccACCGAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAACTTTTGTCAGAA-TGGCAGGGGGAAGTCATGGAGGAAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGG----GTGGCTGTTGAGGGCATAGGCAGAGGCAGTGACAACGGACAGGAGGTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccctgggt--tcaaatcctcccttagcca i macFas5.chr19 I 2541 C 0 s papAnu2.chr19 47966912 394 + 51301725 agaCTAAGACAGCCTCCCACCAAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAATTTTTGTCAGAA-TGGCagggggaagtcatggaggaaaatttccaaaggaagggggaaggggatgggtgggggtgggggtgttgaGGGCATAGGCAGAGGCAGTGACCACGGACAGGAGGTGTCCACAGAACGGGGACTGCCACTGGCCCTGGAGACAGAAGGTCAGCCCCGGGT--TCAAATCCTCCCTTAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667655 391 + 50890351 agactaagacaGCCTCCCACCGAGACACACTTCCCTCACGTGGCCCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTACCGAGCTAAATC-TAATTTTTGTCAGAA-TGGCGGGGGGAAGTCATGGAGGGAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGGG---GGGGGTGTTGAGGGCATAGGCAGAGGCAGTGACCACGGACAGGAGTTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccccgtgt--tcaaatcctcccttagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74429 379 + 138250 AAACGAAGGCATCCTCCCACGCAGACATACTCCCCTCA-GGAGCTCTGGGGAGAAATCCTGTGGATAGCTTTGCTAGCAAGCCCTACCGCATGGAGGGAATCCCCAAAAACGGATTTTAGAAAGGAAGGTGTTTATGCCTGGTAAGCTTATTCATTTCTGTGATGTCCTCGGAGCTGGGCCAGACACTTAACAAGCTAAATCTTAGCTATAATCAGAA-TGGGGAG------TCATAGAGGGAAATTTCCAAAGGAAGAGGGAGCGGGATGGATGG----GGGC----TGAGGGCATGAGCAGAGACA-TGACCATGGACAGGAGGTGGCCACAgaacagggactgctactggccctggagac---aggtcagccccgggt--tcaaatcctggttca-cca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149086 317 - 122678785 aaacagaga----ccccca-------acactcacctggctgggtttcgggaagaaatggcatgtataatgtggtcagcaaggaccagggcacaggggaagttctcgaaagaagatGCCAAG----------------CCTGAGGAGCTCGTTAACATGTGAGAAGTGCTTGGAGCTG-----------TGTGGGGCTCCATC---------ATCAGAG-----GGG-----TTTACTGGGGGGAATTTCCAGAGGAAGAGG---------------------------CAAGGGCAGGGGTAGAGGCAGGAACAACGGATGGGAGGTGTGCACAG-GGAGGGACAGACCCTGGCCCCGGAGACAGAAAGGCAGGCCTGGGGGATCAAATCCTACCCTTTCCA i canFam3.chr1 C 0 I 467 a score=298369.000000 s hg38.chr19_GL949748v2_alt 1055489 100 + 1064304 agtgctgaaatggacaagttgctcaacctctctggccttcagcttcctcatctgtcaagcaggaatcaaacctcgaacttcctcccgctgttagaatttc s panTro4.chr19 59988233 100 + 63644993 agtgctgaaatggaccagttgctcaacctctctggccttcagcttcctcatctgtcaagcaggaatcaaacctcgaacttcctcccgctgttagaatttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943983 100 + 60714840 agtgctgaaatggaccagttgctcaacctctctggccttcagcttcctcatctgtggagcaggaatcaaacctcgaacttcctcccgctgttagaatttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411848 100 - 106955855 agtgctgaaatgggccagttcctcaacctctctggccttcagctgcctcatctgtcaagcagaagtcaaacctcgaacttcctcctgctgttagaatttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60721360 100 + 64156825 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaagcagaaatcaaacctcgaacttcctcccgttgttagaatttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879200 100 + 59248254 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaagcagaaatcaaacctcgaacttcctcccgttgttagaatttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967306 100 + 51301725 AGTGCTGAAATGGACTAGTTGTTGAACCTCTCTAGCCTTCggcttcctcatctgtcaagCAGAAATCAAACCTCGAACTTCCTCCCGTTGCTAGAATTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668046 100 + 50890351 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaaccagaaatcaaacctcgaacttcctcccgttgttagaatttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74808 100 + 138250 ggtgctgaaacggaccagtcgctcaccctccctagacttcagcttccttatctgtcaagcagaaatCCAACCTCGAACTTCCTCCCGTTGTTAGAATTTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20149403 467 - 122678785 I a score=1194596.000000 s hg38.chr19_GL949748v2_alt 1055589 390 + 1064304 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatgtactgttcgttgctattattCTGTTGCTACAAGGCAGACAGTTA-GTTTCCCAGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCGCCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTATGCggaggcg-----------gaggcggaggcaggacggccctgggagggagcagg-aggaggGGCCGGCAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATCCGGGTCAGGAGAGAAGGGGGCCGGGGCTTGACCAAT----------------------GGGTCTGAGGGACGGGGGGA--------CTGGGGT s panTro4.chr19 59988333 384 + 63644993 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtatgacatcaaatgtactgttcgttgctattattCTGTTGCTACAAGGCAGACGGTTA-GTTTCCCGGCTCCCCTGCAGTACCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCACCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGAAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtccggagagaagggggccggggcttgaccaat----------------------gggtctgagggacgggggga--------ctggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944083 383 + 60714840 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatgtactgttcgttgttattaGTCTGTTGCTACAAGGCAGATGGTTA-GTTTCCCGGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCGCCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtccggagagaa-ggggccggggcttgaccaat----------------------gggtctgagggacgagggga--------ctggggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411948 379 - 106955855 aagggagttttaaagacagagctttcaactctgacccgtgaacaagcgtgacatcaaatgtactgttcgttgttattattCTGTTGCTACAAGGCA----GTTA-GTTTCCCGGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATATGTCTGCCAGCCCCGCCCTGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------gcg-----------gaggcggaggcaggacggccctggcagggagcagg-aggaggGGCCAGCAGCCTG------GAAGGG-AAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtctggagagaagggggccggggcttgaccaac----------------------gggtgtgcgggaggaggggc--------tgcgggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60721460 372 + 64156825 aagggagttTTAAAGACAGAGCTTTCAACTCTGACCTGTGAACAAGTGTGACATCAAATTTACTGT---TTGCTATTAGTCTGTTGTTACGAGGCAGAG----A-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACAGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATccgggttcagagagaaggaggccgggatttgaccaat----------------------gggtctgagggagaagggga--------ctggggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879300 376 + 59248254 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatttactgt---ttgttattaGTCTGTTGTTACGAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGTTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACAGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCagagagaaggaggccgggatttgaccaat----------------------gggtctgagggagaagggga--------ctggggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967406 376 + 51301725 AAGGGAGTTTTAAAGACAGAGCTTTCAACTCTGACCTGTGAACAAGTGTGACATCAAATTTACTGT---TTGTTATTATTCTGTTGTTACAAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTgggagggagcagg-aggaggggccGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCAGAGAGAAGGAGGCCGGGATTTGACCAAT----------------------GGGTCTGAGGGAGAAGGGGa--------ctggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668146 379 + 50890351 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatttactgtttgttgttattattCTGTTGTTACAAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGATGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACAGAAAGGACAGTGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCagagagaaggaggccgggatttgaccaat----------------------gggtctgagggaggagggga--------ctggggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74908 414 + 138250 CAGGAAGTTTT-AAGACAGAGCTTTCAACTCTGACCTGTGAACAAGCCTGACATCAAAT-TACAATTTGTTGTTGTTATTCTGCTGTTACAAGGCAGACAGTTAGGTTTCCTGGATCCCCTGCGGTCCTCCCAGCCCCCTCCTAGATCTGTCTGCCAGCCCCGCCC-AAGGCCACTCCAGCCAGGCGGTGCCAGGTGAATGCTCAGGTAT------GCGGAGGCGGAGGCGAGGCGGAGGCAGGATGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAAGGAAAAGGACAGCAGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCCGGTGAGGAGATCCAGGTCAGGAGAGAA-GGGCCGGgggtctgaggaaggaggggttgaccctggacaccagggtctgagagaagagggg---------ctggggt i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149870 394 - 122678785 AAGAGGGTATCTGAGGCAGAGCTGTCGGCGCTGA-----GAACAAGTGTGACATCAGAT-TACTTGTCCTTGAGCTGA---TGTTGTTATGACAGAGACAGTCACAGTTTGTGGCTCCCCCG---------CAC-CCCAGCCCGGATGTCTGTGCCAGCCCCGCCC-AGGGCCACCGCTGCTGGGCTGTGCCAGGTGAGTGCTCAGGTAT------GCG-----------GAGGCAGAGGCGGGGTGGCCT--GGAGGGAGCAGGAAGGAGGGGCCGGCATTCCGCATTCTGGACTCAGGGGACAGCAGAGAGCTGGGCCTCTCCGTGCCACCGCCACCAGACAGAGCCTGACGGTGGCAGGTGAGGAA----GGGGCTAGCCAGGAGGGGCTGGAGGTCCG----------------------------GAGTCCCAAGGAGCAGGCGGCCAGGACTCTGGGGT i canFam3.chr1 I 467 C 0 a score=91807.000000 s hg38.chr19_GL949748v2_alt 1055979 46 + 1064304 CTGGACTccaggg--------------------------tctcagggaggacgggctgggggtctgaactcc------------ s panTro4.chr19 59988717 46 + 63644993 ctggactccaggg--------------------------tctcagggaggaggggctgggggtctggactcc------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944466 46 + 60714840 ctggactccaggg--------------------------tctcagggaggaggggctgggggtctggactcc------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103412327 46 - 106955855 ctggactcctggg--------------------------tctgagggaggaggggctgcgggcttggactCC------------ i nomLeu3.chr10 C 0 M 627 s rheMac3.chr19 60721832 46 + 64156825 ctggactcctggg--------------------------tctgagggaggaggggctgggggcctggactcg------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879676 45 + 59248254 ctggactcctggg--------------------------tctgagggaggagggact-ggggtctggactcc------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967782 45 + 51301725 ctggactcctggg--------------------------tctgagggaggagggact-ggcgtctggactcc------------ i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75322 45 + 138250 ctggacacctggg--------------------------tctcatggaggaggggct-ggggtctggactct------------ i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150264 84 - 122678785 CCAGACACCAGGAAGGCTGGCAGACATAAACCCTTGAGTCCTGAAGAGGTAAGGGCTGGGAGATTGGCCCCATACTGAGGTCAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47668525 0 + 50890351 C a score=35117.000000 s hg38.chr19_GL949748v2_alt 1056025 24 + 1064304 cgggtctgaggga------------------ggagggcctgg- s panTro4.chr19 59988763 24 + 63644993 tgggtctgaggga------------------ggagggcctgg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944512 24 + 60714840 tgggtctgaggga------------------ggaggggctgg- i ponAbe2.chr19 C 0 M 415 s rheMac3.chr19 60721878 24 + 64156825 tgggtctgaggga------------------ggagggattgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879721 22 + 59248254 tgggtctgaggga------------------ggaggggct--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967827 24 + 51301725 tgggtctgaggga------------------ggaggggctgg- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75367 22 + 138250 tgggtctgaggga------------------gaagggtct--- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150348 43 - 122678785 AGTGTCTGAGGAATTGGATGAATGACTCTCTGAGGGGACTTGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103412373 627 - 106955855 M e chlSab2.chr6 47668525 0 + 50890351 C a score=39442.000000 s hg38.chr19_GL949748v2_alt 1056049 41 + 1064304 ----------------------ggtcctggactcctaggtctgagggagga-ggggctgagggc- s panTro4.chr19 59988787 41 + 63644993 ----------------------ggtcctggactcctaggtctgagggagga-ggggctgagggc- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60721902 40 + 64156825 ----------------------gggcctggactcccgggtct-agggagga-gggattgggggc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879743 40 + 59248254 ----------------------gggcctggactcctgggtctgagggagga-gggact-ggggt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967851 41 + 51301725 ----------------------gggtctggactcctgggtctgaaggaggaggggact-ggggt- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75389 41 + 138250 ----------------------agccctggacccctaagtctgaaggagga-gggattgggggc- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150391 64 - 122678785 AGTCTTTGGGTCCAGAAGCTCTGAGCCTGAATTCCTGGGCCCTAGAGGAGATGAGGCT-GGGACA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e chlSab2.chr6 47668525 0 + 50890351 C a score=103139.000000 s hg38.chr19_GL949748v2_alt 1056090 65 + 1064304 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggagat-ggggcctggactcct-gggtctgagggaggagtgg s panTro4.chr19 59988828 64 + 63644993 ctggattcctgg-------------------------------------gtc--------------------------------------------tgagggaggggctg---ggggcctggacccccagggtccaagggaggagggg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60721942 66 + 64156825 ctggactcctgg-------------------------------------atc--------------------------------------------tgagggaggagggattgggggcctggactcct-gggtctgagggaggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879783 66 + 59248254 ctggactcctgg-------------------------------------gtc--------------------------------------------tgaaggaggaggggactggggtctggactcct-gggtctgagggaggagggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967892 66 + 51301725 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggctgggggcctggactcct-gggtctgagggaggagggg i papAnu2.chr19 C 0 M 829 s chlSab2.chr6 47668525 63 + 50890351 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggct--gggcctggactcct-gggtct-agggaggagggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75430 66 + 138250 ctgaactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggctggtgacctggactcct-gggtctgagggaggagggg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150455 146 - 122678785 CAGGATCACTGGAGAGAGGAAGCAAAGTGGGGTACACATAGATTAGGGAGTCAAATGCATTGATCCCTGAGAGATTTGGGGGGGCAGCATACTAGGTGAGGGAAGAGGGGCTGGGGGGCCAGACTCCT-GGGTCTGAGGGAGGAGGG- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M a score=80701.000000 s hg38.chr19_GL949748v2_alt 1056155 61 + 1064304 actggggtctggactcctgggtctgagggaggaggggactggggtctggactcc--tgggtct s panTro4.chr19 59988892 61 + 63644993 ctgggggcctggtctcctgagtctaagggaggaaggattgggggcctggactcc--tgggtct i panTro4.chr19 C 0 I 1 s rheMac3.chr19 60722008 60 + 64156825 ctggggaccagggctcctgggtctgagggaggaaggg-ctggggcctggactcc--agggtct i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55879849 61 + 59248254 ctgggggcctggactcgtgggtctgaaggaggaggggactggggtctggactcc--tgggtct i macFas5.chr19 C 0 I 292 s chlSab2.chr6 47668588 63 + 50890351 ctgggggtctggactcctgggtctgagggtggagggactgggggtctggacgtccgtgggtcg i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 75496 60 + 138250 ctggaggcctggactcctgagtctgagggaggagggg-ctggggtctggactcc--tgggtct i calJac3.chr22_GL285922_random C 0 I 1 s canFam3.chr1 20150601 61 - 122678785 GCTGGGGTCTGGACTCCTAGGTCTGAGGGAGGAGGGGCTAGGGGCCTGGACTCC--ACAGTCT i canFam3.chr1 C 0 I 1 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M a score=26624.000000 s hg38.chr19_GL949748v2_alt 1056216 22 + 1064304 aggg-------aagagggact--ggggcctg s panTro4.chr19 59988954 22 + 63644993 aggg-------aggaggggct--ggggCCTG i panTro4.chr19 I 1 M 797 s rheMac3.chr19 60722069 22 + 64156825 aggg-------aggagggact--ggggcctg i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55880202 23 + 59248254 aggg-------aggaggggct-gggggcctg i macFas5.chr19 I 292 C 0 s chlSab2.chr6 47668652 30 + 50890351 agggnnnnnnnnnnaggggct-gggggcctg i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 75557 24 + 138250 aggg-------aggaggggtatgggggcctg i calJac3.chr22_GL285922_random I 1 C 0 s canFam3.chr1 20150663 23 - 122678785 AGGG-------AGAAGGGGCT-GGGGGTCTG i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M a score=29552.000000 s hg38.chr19_GL949748v2_alt 1056238 25 + 1064304 gacttctgggtctgagggaggaggg s rheMac3.chr19 60722091 25 + 64156825 gacttctgggtctgagggagggggg i rheMac3.chr19 C 0 M 560 s macFas5.chr19 55880225 25 + 59248254 gactcctgggtctgagggaggaggg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668682 25 + 50890351 gactcctgggtctgagggaggaggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75581 25 + 138250 aactcctgggtctgagggaggaggg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150686 24 - 122678785 GACTACT-GGTCAGAGGGAGGAGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=1500.000000 s hg38.chr19_GL949748v2_alt 1056263 1 + 1064304 g s nomLeu3.chr10 103413000 1 - 106955855 g i nomLeu3.chr10 M 627 C 0 s macFas5.chr19 55880250 1 + 59248254 g i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668707 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75606 1 + 138250 g i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150710 1 - 122678785 G i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e rheMac3.chr19 60722116 560 + 64156825 M e panTro4.chr19 59988976 797 + 63644993 M a score=2100.000000 s hg38.chr19_GL949748v2_alt 1056264 1 + 1064304 c s nomLeu3.chr10 103413001 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722676 1 + 64156825 c i rheMac3.chr19 M 560 C 0 s macFas5.chr19 55880251 1 + 59248254 c i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668708 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75607 1 + 138250 c i calJac3.chr22_GL285922_random C 0 I 287 s canFam3.chr1 20150711 1 - 122678785 C i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=306149.000000 s hg38.chr19_GL949748v2_alt 1056265 218 + 1064304 tgggggcctggactcctgggcctgagggagg-aggggctggggcctggatgcctgcattgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCTTCACATGTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--ACCA--CTCAGCACCATGAGCACCGCCACAGGGTAAGCGCCCCCGGACCCCAGGTCCCA-GCCCCAGCA- s nomLeu3.chr10 103413002 217 - 106955855 tgggggcctgaactccaggatctgagggagg-aggggctggggcctggctgcctgcattgagggaggag--gctggggTAGGAGTTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--TCCA--CTCAGCACCATGAGCACCGCCACAGGGTAAGTGCCCC-GGACCCCGGGTCCCA-GCCCCAGCG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722677 218 + 64156825 tgggggtctggactcctgggtctgagggagg-agggactggggcttggatgcctgtgttgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACGGGGCAGGTCCCCCTGGCccccaggcccca-gccccagcc- i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55880252 219 + 59248254 tgggggcctggactcctgggtctgagggagg-aggggccggggcttggatgcctgtgttgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACCGGGTAAGTGCCCCTGGCccccaggccccaggccccagcc- i macFas5.chr19 C 0 I 19 s chlSab2.chr6 47668709 216 + 50890351 t--gggcctggactcctgggtct-agggagg-aggggctggggcctgaatgcctgtgttgagggaggag--gctggagTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACTGGGTAAGTGCCCCCGGCccccaggccccaggccccagcc- i chlSab2.chr6 C 0 I 19 s calJac3.chr22_GL285922_random 75895 211 + 138250 tggtgacctggactcctggatct-agggagg-aggagctgggacctggacACCTGC-TTGAGGGAGGAG--GCTAGGGTAGGAATCAGAGGCTCCC----ACTGTCTGGGCCCTCACATCTTTGCTGCCTCCCAGGGCACCTCCAGGTGGGAAAAGGCTTCCCCT--CTCAGCACCATGAGCACCACCACCGGGTAAGTGCccctggccccca--------gccccagcc- i calJac3.chr22_GL285922_random I 287 C 0 s canFam3.chr1 20150712 223 - 122678785 TGGGGGCCTGGATTCCTAGGTCTGAGGGAGGAAAGGGCTGGGGTCTGGACTCCTGGTCAGAGGGAGGAGGAGCAGGGGCCAAAATCACAGATACCTCAGGCCAGGTCAGTCCCTCACCTCTTTGATGGTTTCCAGGGCACCTCCAGGT-GGCAGGAGCT--CCCATTCTCCACACCATGAGCACTAGCACCGGGTAAGTGTCCCTTGTCCCC---TCCC--CCCCCAGGCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=39489.000000 s hg38.chr19_GL949748v2_alt 1056483 24 + 1064304 CGCCTCCCG------------------------CCTCCCCTCGCCTCC s ponAbe2.chr19 56944968 24 + 60714840 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i ponAbe2.chr19 M 415 C 0 s nomLeu3.chr10 103413219 24 - 106955855 CGCCTCCCG------------------------CCTGCCCTCGCCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722913 24 + 64156825 CGCCTCCCG------------------------CCTCCGCTCGCCTCC i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55880490 24 + 59248254 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i macFas5.chr19 I 19 C 0 s chlSab2.chr6 47668944 24 + 50890351 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i chlSab2.chr6 I 19 C 0 s calJac3.chr22_GL285922_random 76106 48 + 138250 cgcctcccatctgcgtctgcccctgcccctgcccctgcccctgcctcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150935 24 - 122678785 GCCCTGTCA------------------------CCTCTGCCAGCCTCG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=25424.000000 s hg38.chr19_GL949748v2_alt 1056507 9 + 1064304 TCACCCACA s ponAbe2.chr19 56944992 9 + 60714840 TCACCCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413243 9 - 106955855 TCACCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722937 9 + 64156825 TCACCCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880514 9 + 59248254 TCACCCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47968787 9 + 51301725 TCACCCACA i papAnu2.chr19 M 829 C 0 s chlSab2.chr6 47668968 9 + 50890351 TCACCCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 76154 9 + 138250 tcacccaca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150959 8 - 122678785 -TCCCTGCA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59988976 797 + 63644993 M a score=14324.000000 s hg38.chr19_GL949748v2_alt 1056516 5 + 1064304 CCCGC s panTro4.chr19 59989781 5 + 63644993 CCCGC i panTro4.chr19 M 797 C 0 s ponAbe2.chr19 56945001 5 + 60714840 CCCGC i ponAbe2.chr19 C 0 I 5 s nomLeu3.chr10 103413252 5 - 106955855 CCCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722946 5 + 64156825 CCCGC i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55880523 5 + 59248254 CCCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47968796 5 + 51301725 CCCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668977 5 + 50890351 CCCGC i chlSab2.chr6 C 0 I 5 s calJac3.chr22_GL285922_random 76163 4 + 138250 cctg- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150967 5 - 122678785 CCCAC i canFam3.chr1 C 0 C 0 a score=-872.000000 s hg38.chr19_GL949748v2_alt 1056521 15 + 1064304 TTGCGGCAGCCCAGA s panTro4.chr19 59989786 15 + 63644993 TTGCGGCAGCCCAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103413257 3 - 106955855 ------------AGA i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 55880528 3 + 59248254 ------------AGA i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47968801 3 + 51301725 ------------AGA i papAnu2.chr19 C 0 I 2 s calJac3.chr22_GL285922_random 76167 4 + 138250 -----------cAGA i calJac3.chr22_GL285922_random C 0 I 2 s canFam3.chr1 20150972 8 - 122678785 -------AACTGACA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56945006 5 + 60714840 I e chlSab2.chr6 47668982 5 + 50890351 I e rheMac3.chr19 60722951 5 + 64156825 I a score=717039.000000 s hg38.chr19_GL949748v2_alt 1056536 228 + 1064304 CTGTTTGCGGCGGCCCAGACTCTGGCCCAAGCCCCGACACTCAGGAGGAAGCCAGAGCCTCTCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgctgat-gtaaccctgg---tcagaggacatcacctcctggagcctcagcccctcctctgtgacacagggacaatgttgaaaaattgg------------- s panTro4.chr19 59989801 228 + 63644993 CTGTTTGCGGCGGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCTCTCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttt-ggccctcacactcagtgctgat-gtaaccctgg---tcagaggacatcacctcctggagcctcagcccctcctctgtgacacagggacaacgttgaaaaattag------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945011 228 + 60714840 CTGTTTGCGCCAGCCCAGACTCTGGCCCAAGCCCCGACACTCAGGAGGAAGCCAGAGCCGCTCCCCTCCCTACCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgctgat-gtaacccttg---tcagaggatatcacctcttggagcctcagcccctcctctgtgacacagggacaacgttgaaaaattgg------------- i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 103413262 227 - 106955855 CTGTTTGCGGCAGCCCAGACTCTGGCCCAAGCCCGGACGCTCAGGAGGAAGCCAGAGCTGCGCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgccaat-gtaaccctgg---tcagcggacgtcacctcttggagcctcag-ccctcctctgtgacacagggacaatgtcgaaaaactgg------------- i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60722956 228 + 64156825 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCGCTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgtgctccagctc-ggccctcacactccatgctgat-gtaaccccgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55880533 228 + 59248254 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCACTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgtgctccagctc-ggccctcacactccatgctgat-gtaaccccgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47968806 228 + 51301725 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCACTCTCCTCCCTGCCCAGCCTGGGGTTAGGGGCCCCCACTGTAGAGC-AGACAGGCCTGAGCTCCAGCTC-GGCCCTCACACTCCGTGCTGAT-GTAACCCCGG---TCAAAGGACATCACCTCTTGGAGCCTCAGCCCCTCCTCTGTGACACAGGGACAATTTTGAAACATTGG------------- i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47668987 228 + 50890351 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAAGAAGCCAGAGCCACTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgagctccagctg-ggccctcacactccgtgctgat-gtaaccctgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i chlSab2.chr6 I 5 C 0 s calJac3.chr22_GL285922_random 76173 227 + 138250 CTGTTTCCTGCAGTGCAGACTATGG-----GCCTGGACACTCAGGAGGAAGCCAGAGCCGCTCTCCTCCCTGCCCAGCCTGTGGTCaggagcacccgctgtagagc-agacaggcctgagctccagctg-ggcactcatactcagggctgatcttaaccctagtcatcaaaggacatcacctcttggagcctcagcccctcctctgtgaaacagggacaatTTTGAAAAACTGG------------- i calJac3.chr22_GL285922_random I 2 I 1229 s canFam3.chr1 20150980 211 - 122678785 ---TTTACAGCAGCCCAG------------GTCTGGACACTGAGAAGGAAGCCTGAGCTGCTC-CTTCCCTG-CCGGTCTATGCT--GGAGCTACTGctccagtgcaagaca--cctgggtccaaacccagacactaacactcaggg-tggt-gtgactctaa---cca------acaacct----gagcctgagcccctcctctgtgaaagagggacaataaaaaaaaaataaaaaaaaaaaaaaG i canFam3.chr1 C 0 C 0 a score=331082.000000 s hg38.chr19_GL949748v2_alt 1056764 126 + 1064304 agggatagt------gcattacaggacttagc----------tgaccacctcactgacagcaggtgctcaactcataggagtcgctattGCGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG s panTro4.chr19 59990029 126 + 63644993 agggatagt------gcattacaggacgtagc----------cgaccacctcactgacagcaggtgctcaactcataggagccgctattGCGATCGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945239 126 + 60714840 agggatagt------gcattacaggacttagc----------cgcccacctcactgacagcaggtgctcaactcataggagccgctattgtGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413489 125 - 106955855 agggatagt------gcattacaggacttagc-----------gaccacctcactgacagcaggtgctcaactcataggagccgctattGCGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723184 126 + 64156825 tgggatagt------gcattacaggacttagc----------cggccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880761 126 + 59248254 tgggatagt------gcattacaggacttagc----------cggccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969034 126 + 51301725 TGGGATAGT------GCATTACAGGACTTAGC----------CGGCCACCTCACTGACAGCCGGTGCTCAGCTCATAGGAGCCTCTGTTGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669215 126 + 50890351 tgggatagt------gcattacaggacttagc----------cgaccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20151191 140 - 122678785 AGGGACAATATGAGAGCCTGACAGG--TTAATGAAGGTACAAGGCTTATCTGACTCACAGCAGGTACTCCACTCACAGGAACTGCCACTGCGGCTGTTAGCGTGTTATTAAATATTGACTCTTTGCAGGCAAATCTGGGCTG i canFam3.chr1 C 0 I 208 e calJac3.chr22_GL285922_random 76400 1229 + 138250 I a score=273950.000000 s hg38.chr19_GL949748v2_alt 1056890 101 + 1064304 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA s panTro4.chr19 59990155 101 + 63644993 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945365 101 + 60714840 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAaacaatgagagatgagtcaaaatacctgcatggtaggtagtgagctctctggcccaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413614 101 - 106955855 TTTATAATGAAGACTCGAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723310 101 + 64156825 TTCATAATGAAGACTCAAGTCTCCTAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880887 101 + 59248254 TTCATAATGAAGACTCAAGTCTCCTAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969160 101 + 51301725 TTCATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCGCTGGCCCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669341 101 + 50890351 TTCATAATGAAGACTCCAGTCCCCCAGAGTAAGGAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20151539 92 - 122678785 TTTCTAATAAAG-TTCAAGTCTCCTGGGGTGAGCAAGGAGAAGCCCAAACAGAGGCCCCTGTGAATAGCTGCAT--------GTAAGTTCCCCAGCACAGC i canFam3.chr1 I 208 C 0 e calJac3.chr22_GL285922_random 76400 1229 + 138250 I a score=208081.000000 s hg38.chr19_GL949748v2_alt 1056991 59 + 1064304 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCAGGATGAGGAACAGGAGTTTGG s panTro4.chr19 59990256 59 + 63644993 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945466 59 + 60714840 ggtaatcaaATTGTGGTGACATCAGACTGGCAGGAGTGGGATGAGGAACAGGAGTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413715 59 - 106955855 GGTAATCAAATTGTGATGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723411 57 + 64156825 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880988 57 + 59248254 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969261 57 + 51301725 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669442 59 + 50890351 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCGGGATGAGGAATAGGAGTTTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 77629 58 + 138250 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCAGGATGAGGAA-AAGACTTTGG i calJac3.chr22_GL285922_random I 1229 I 474 s canFam3.chr1 20151631 59 - 122678785 AGTAATCAAACTGTGTGGAGATCTGACTGGCAGGAGAAGGATGAGGAGCAGAGATTTGA i canFam3.chr1 C 0 C 0 a score=1545048.000000 s hg38.chr19_GL949748v2_alt 1057050 507 + 1064304 GAAAAAGGGTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCATGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAATCTTAGGAAGAAATTGAGGACGGG---AGGAGACAGAGAAGGATGTGGTTGGGAAGCACCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTATAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatgg--------------tta----ctacgttacagaaagaaaaactgaggcaggagagattaaatcctcttctgaaggtcttatggcaaggaggcagtagacagagggtttgaatc-------------ccggactATGCCATGGTAGAGATCACACT-CCCCTACCACCCAGCACCACCGCCT s panTro4.chr19 59990315 507 + 63644993 GAAAAAGGGTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCGTGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATTGAGGACGGG---AGGAGACAGAGAAGGATGTGGTTGGGAAGCGCCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGaatgataataacagttattgaggcttcagaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatgg--------------tta----ctatgttacagaaacaaaaactgaggcaggagagattaaatccccttctgaaggtcttatggcaaggaggcagtagacagagggtttgaatc-------------ccggactATGCCATGGTAGAGATCACAGT-CCCCTACCACCCAGCACCACCGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945525 506 + 60714840 G-AAAAGGCTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCCGGCAAGTGGGGGATTCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATTGAGGACAGG---AGGAGACAGAGAAGGATGTGGCTGGGAAGCGCCTGGCCCATGTGAGTAGGAGGGGACGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttatcgaggcttcaaaatacttcacctgcatcatctgattgaatttgcccaacagccctacgagatgg--------------tta----ctatgttacagaaagaaaaactgaggcaggagagattaaatccacttctcaaggtcttatgg-aaggaggcagtagacagaaggtttgaatc-------------cgggagtatgccatgatacagatcacact-cccctaccacccagcaccacCGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413774 516 - 106955855 GAAAAAGGGTTTTGCAGTTC----CCCTGACGCCA-CCTGATGGCTGAGCTTCTGTTATGTGCATGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAACCGTAGGAAGAAATTGAGAAC------AGGACACAGAGAAGGATGTGGCTGGGAAGCGCCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACGAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAATAACAGTTACTGAGGCttcaaaatacttcacctccatcatctgattgaatttgcccaacagccctatcagatgg--------------tta----ctatgttacagaaagagaaactgaggtaggagagattaagtctcctcctcaaagtcttatggcaaggaggcagcgcacagagggtttgaatccaggactttgaatcaggactctgCCATGGTAGAGATCACACT-CCCTTACCACCCAGCACCACCG-CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723468 505 + 64156825 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCAAGGACAAG---AGGAGACAGAGAGGGATGCGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGAGGGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTATTGtaacaatccccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatag--------------tta----ctatgttacagaaag--aaaccgaggca-gagagattaagtccccttctcaaggtcttatggcaaggaggcagtagacagaggatttgaatc-------------caggactatgccatggttgagaccacgctccccctaccacccagcaccaccGCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55881045 505 + 59248254 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCAAGGACAAG---AGGAGACAGAGAGGGATGCGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGAGGGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTATTGTAACAATCCCcatttattgagcaacttctgtgtgctaagccctgGCAGCATCTTAAGAATGATAATAACAGTTATTGAGGCTTCAaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatag--------------tta----ctatgttacagaaag--aaaccgaggca-gagagattaagtccccttctcaaggtcttatggcaaggaggcagtagacagaggatttgaatc-------------caggactatgccatggtcgagaccacgctccccctaccacccagcaccaccGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969318 506 + 51301725 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGTGCGTGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCGAGGAcaag---aggagacagagagggatGCGGCTGGGAAGCGCCTGGCccatgggggtgggaggggaaacAGATAATTCCCTGTCTACTTCAGATGCTACTAATGCTATTGTAACAATCcccatttattgagcaacttcTGTGTGCTAAGCCCTGGCAGCATCTTAAGAATGATAATAACAGTTATTGAGGCTTCAAAATACTTCACCTGCATCATCTGACTGAATTTGCCCAACAGCCCTACCAGATAG--------------TTA----CTATGTTACAGAAAG--AAACCGAGGCAGGAGAGATTAAGTCCCCTTCTCAAGGTCTTATGGCAAGGAGGCAGTAGACAGAAGGTTTGAATC-------------CAGGACTATGCCATGGTAGAGACCACACTCCCCCTACCACCCAGCACCACCGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669501 505 + 50890351 GAAAAAGGGTTTATCAGTTC----CCCTGACACCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTGGGAAGAAATCGAGGACAAG---AGGAGACAGAGAGGGATGTGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGA-GGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTGTTGTAACAATCCCcattgattgagcaacttctgtgtgctaagccctgGCAGCATCTTAAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccccaccagatag--------------tta----ctatgttacagaaag--aaaccgaggcaggagagattaagtccccttctcaaggtctcatggcaaggaggcagtagacagaggatttgaatc-------------caggactATGGCATGGTGGAGACCACACTCCCCCTGCCACCCAGCACCGCCGCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78161 501 + 138250 GAAAAAGGGTTTTTCAGTAC----CCCCGACTCCACCCTTATCTCTGAGCTTCTGTTATTTACATGCAAGT-TGGAATTCAAGATTCCTCTTGGGAAAGGTAACCTTAGGAAGGAATTGGGGACAGA---AGGTGTCACAGAAGGATGTGGCTGGGAAGCGCCTGGCCCAGAGAAGTGGGAAGGGAAGAAGATAATT-CCTGTCTACTTCAGATACCACTAATGCTATagtaatgattcccatttattgagcaacttctgtgtgctaaaccctggcagcatcttaagaatgataataacagttattgaggcttcgaaatatgtcacctgcatcatc----tgaatttgcccaacagccttgctaggtag-----------------------atattacagaaggagaaactgaggcaggagagattaagacctcttctctaggtcttatgtcaaggaggcagtagacagagggtttgaatc-------------caggaccatgccacggccgagaccacactccccctaccacccagcaccaccGCCT i calJac3.chr22_GL285922_random I 474 C 0 s canFam3.chr1 20151690 437 - 122678785 TTCAAAGTATTTCTTGTCCCTCATCCCTGATCCTA-CCTGAGCTCTGAATTTCCATCATTTCT------GT-G---------GAAT--TCTTGGAGAAGTTGA-CTTAGAAGGA----GAGGCCAGGAGCAGGAGATGGAGAAGGATTTGGCTGGGAAGAGCCTGGCCCATGGGAGTAGGAGGGGG---AGATAAGTCTCTGTCTACACCAAAT---ACTAATGCTGTTGTAAAAAACCccatttactgagcacctactgtgtgctacccttt----gcatcgtagcactgacagtta-agttattgaggctgtgaaccctctcaac-------tctccatgaatcca-ccaacagctctaccagatggaggctattggataattaacccctatctcagagaaaaggaaaccaaggcgggagatattcagtctcctccccagggtcttatggcaagacagtatt-gacagaggatgccaag--------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=323905.000000 s hg38.chr19_GL949748v2_alt 1057557 176 + 1064304 GACCTGACCTGtctttttttttttttttttttttttgagatggagtctcactctgctgccaggctggagtgcagtggcacgatctggactcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctggcactacaggcgcccaccaccacac s panTro4.chr19 59990822 173 + 63644993 GACCTGACCTGtc---ttttttttttttttttttttgagatggggtctcactctgctgccaggctggagtgcagtggtgcgatctcgactcactgcaacctccgcctcccaggttcaagtgattctcctgccttagcctcccacgtagctgggactacaggcgcccgccactacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946031 172 + 60714840 GACCTGACCTGtc----tttttttgtttgtttgtttgagatggggtctcactctgctgccaggctggagtgcagtggcgcgatctcgactcactgcaacttccgcctcccaggttcaagtgattctcctgccttagcctcccatgtagctgggactataggcgcatgccaccacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414290 169 - 106955855 GA-CTGACCTGtc------tttttttttctttttttgagatggggtctcactctgctgccaggctggaatgcagtggcgcaatctcgactcactgcaacctccgcctcctaggttcaagtgattctcctgccttggcctcccacgtagctgggactacaggcgcacgccaccacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723973 158 + 64156825 GACCTGtct--tc--------------ttttttttcgagatggggtctcg--ctgttgccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacaggcacccgccaccacac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55881550 154 + 59248254 GACCTGtct--tc--------------ttttttttcgagatggggtctcg--ctgttgccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacag----ccgccaccacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969824 157 + 51301725 gacctgtct--tc---------------tttttttcgagatggggtcacg--ctgttgccaggctggagtgcagtggcgcgatctgagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctctcacgtagctgggactacaggcacccgccaccacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670006 166 + 50890351 GACCTGtct--tc------ttctttttttttttttcgagatggggtctca--ctgttgccaggctggagtgcagtggcacgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacagtcacccgccaccacac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20152127 57 - 122678785 ----------------------------------------------------------ccaggtctgTGGGCGGAGG--------------------------GGCTCCCAAT----------------------------------ACTGGAACCACACAC-TCTACCACCACCC i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=14525.000000 s hg38.chr19_GL949748v2_alt 1057733 6 + 1064304 ccagct s panTro4.chr19 59990995 6 + 63644993 ccagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946203 6 + 60714840 ccagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414459 6 - 106955855 ccagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724131 6 + 64156825 ccagct i rheMac3.chr19 C 0 M 372 s macFas5.chr19 55881704 6 + 59248254 ccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969981 6 + 51301725 ccagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670172 6 + 50890351 ctggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=94119.000000 s hg38.chr19_GL949748v2_alt 1057739 56 + 1064304 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtctca s panTro4.chr19 59991001 56 + 63644993 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946209 56 + 60714840 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414465 56 - 106955855 aa--cttttgtatttctagtagagacagggtttcaccacgttggccaagatggtctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55881710 58 + 59248254 aatttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969987 56 + 51301725 aa--tttttgtattgttagtagagatggggtttcaccatgttggccaggctggtctcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670178 56 + 50890351 aa--tctttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C e rheMac3.chr19 60724137 372 + 64156825 M a score=13244.000000 s hg38.chr19_GL949748v2_alt 1057795 5 + 1064304 atctc s panTro4.chr19 59991057 5 + 63644993 atctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946265 5 + 60714840 atctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414521 5 - 106955855 atctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724510 5 + 64156825 atctc i rheMac3.chr19 M 372 C 0 s macFas5.chr19 55881768 5 + 59248254 atctc i macFas5.chr19 C 0 I 386 s papAnu2.chr19 47970043 5 + 51301725 atctc i papAnu2.chr19 C 0 I 312 s chlSab2.chr6 47670234 5 + 50890351 atctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=79264.000000 s hg38.chr19_GL949748v2_alt 1057800 34 + 1064304 ttgactttgtgatccgcccacctctgcctcccaa s panTro4.chr19 59991062 34 + 63644993 ttgactttgtgatccgcccacctctgcctcccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946270 34 + 60714840 ttgactttgtgatccgcccacctttgcctcccaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414526 34 - 106955855 ctgacctcgtgatccgcctgcctctgcctcccaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724515 34 + 64156825 ttgactttgtgatccgcccgtctcggcctcccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882159 34 + 59248254 ttgactttgtgatccgcccatctctgcctcccga i macFas5.chr19 I 386 C 0 s papAnu2.chr19 47970360 34 + 51301725 ttgactttgtgatccgcccatctctgcctcccga i papAnu2.chr19 I 312 C 0 s chlSab2.chr6 47670239 34 + 50890351 ttgactttgtgatccacccatctctgcctcccga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=94391.000000 s hg38.chr19_GL949748v2_alt 1057834 38 + 1064304 agtgctgggattacaggcgtgagccaccgcgcccagcc s panTro4.chr19 59991096 38 + 63644993 agtgctgggattacaggcgtgagccaccgcgcccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946304 38 + 60714840 agtgctgggattacaggcgtgagccaccacgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414560 38 - 106955855 agtgctgggattacaggcgtgagccaccgcgcccggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724549 38 + 64156825 agtgctgggattacaggcgtaagctaccgcgtccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882193 38 + 59248254 agtgctgggattacaggcgtgagctaccgcgtccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970394 38 + 51301725 agtgctgggattacaggcgtgagctaccgcgcccggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670273 38 + 50890351 agtgctgggattacaggcgtgagctaccgcgcctggcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20152184 22 - 122678785 GGTACCAGAGTTACCTGTGTGA---------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=3276.000000 s hg38.chr19_GL949748v2_alt 1057872 1 + 1064304 T s panTro4.chr19 59991134 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946342 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414598 1 - 106955855 T i nomLeu3.chr10 C 0 I 134 s rheMac3.chr19 60724587 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882231 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970432 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670311 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78662 1 + 138250 T i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152206 0 - 122678785 C a score=857482.000000 s hg38.chr19_GL949748v2_alt 1057873 285 + 1064304 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTCaataataataataataataataataataataataataataaCCCTTCCATCGCTCCCCATTACCTTCGTCATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAGTCCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGGTGAGC-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct s panTro4.chr19 59991135 273 + 63644993 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC------------aataataataataataataataataataaCCCTTCCATCGCTCCCCATTACCTTCGTAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAATCCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGC-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAACTGCGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946343 262 + 60714840 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------------AATAATAACAATAATAATAACCCTTCCATCGCTCCCCATTACCTTTGTAATG-ATCCCTTGCTGCCCTGCTTGGCATT-----TCCATAGGATCTGCCCCCAATTCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT--GGGGT--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414733 260 - 106955855 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC------------------------AATAATAACAATAATAACCATTCCATCGCTCCCCGTTACCTTCGTAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAATTCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT--GGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i nomLeu3.chr10 I 134 C 0 s rheMac3.chr19 60724588 270 + 64156825 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGGTCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882232 270 + 59248254 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCTGCAGGGTCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970433 270 + 51301725 acctgtCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCtc---------------aataatagtaaaaataataataataacccttCCATAGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCGCAGGATCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670312 270 + 50890351 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCTCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCGCAGGATCCGTCCCCAATTCCACGGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGGTGAGT-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78663 247 + 138250 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTC---------------------------------AAAATAATAATAA----CCTTCCATGGCTCTGCATTGCCCTTGTAATGAAGCCCTGGCT-CCCTGCTTGGCATT-----TCTGCAGAATCTG-CCCCAATTCCACAGTCTCTCTCACCCCTCTTTTCTTCACCAGCCCAGAACCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT-GGGGGGGAGAAGAGAATCCCAGGCCT-CAGAACTGGGTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152206 235 - 122678785 -------------AAATCCAGCTCTGGACCGGCCCTCCTCTGCTC-------------------------AGAA-------------CCCTCCATGGTTCCCCACTGCCCTTACGATGAAGTCTTTGCTGCTCTGCTTGGCACTCAAGATCCCCATGATCT--CCCAATTCCCAAGGTCTCTTTCATTCTTTTTTCCTTATCCAGCCCAGAGGCTGCCCCCAAACCAAGTGCCAAGTCAATCTATGGTGAGTTTCAGAG--CAAGAGAACTCCAGGC---TGAAACTGGGTCT i canFam3.chr1 C 0 C 0 a score=45991.000000 s hg38.chr19_GL949748v2_alt 1058158 17 + 1064304 aaagaaacaggacctgg s panTro4.chr19 59991408 17 + 63644993 AAAGAAACAggacctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946605 17 + 60714840 AAAGAAACAGGACCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414993 17 - 106955855 aaagaaacaggacctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724858 17 + 64156825 AAAGAAACAGGACCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882502 17 + 59248254 aaagaaacaggacctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970703 9 + 51301725 AAAGAAACA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670582 17 + 50890351 aaagaaacaggacctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78910 17 + 138250 AAAGAAACAggatctgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C a score=36543.000000 s hg38.chr19_GL949748v2_alt 1058175 20 + 1064304 catccagggtcttggaggag s panTro4.chr19 59991425 20 + 63644993 catccagggtcttggaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946622 20 + 60714840 CATccagggtcttggaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415010 20 - 106955855 catccagcgtcttggaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724875 20 + 64156825 AATccagggtcttggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882519 20 + 59248254 aatccagggtcttggaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47670599 20 + 50890351 aatccagggtcttggaggag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e papAnu2.chr19 47970712 0 + 51301725 C a score=4159.000000 s hg38.chr19_GL949748v2_alt 1058195 8 + 1064304 gaggggct s panTro4.chr19 59991445 8 + 63644993 gaggggct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724895 8 + 64156825 gagaggct i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47670619 8 + 50890351 gagaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882539 0 + 59248254 C a score=4201.000000 s hg38.chr19_GL949748v2_alt 1058203 17 + 1064304 gggggtctggactcctg s panTro4.chr19 59991453 17 + 63644993 gggggtctggactcctg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724903 15 + 64156825 --gggcctggactcctg i rheMac3.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882539 0 + 59248254 C a score=1628.000000 s hg38.chr19_GL949748v2_alt 1058220 17 + 1064304 agtcagagggaagaggt s panTro4.chr19 59991470 17 + 63644993 agtcagagggaagaggt i panTro4.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882539 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C a score=8355.000000 s hg38.chr19_GL949748v2_alt 1058237 198 + 1064304 gctgggggtctggactcctgggtcagagggaagaggggctggggggctggactcctaggtttgagggaggaggggctgggggcctggactcctgagtcagagggaagaggtgctgggggc-ctggactcctgggtcagagggaagaggggctggggg-gctggactcctgggtcagagggaagaggggctggggggctgg s papAnu2.chr19 47970712 157 + 51301725 -----GGACCTGGAATCCAGGGTC------------------------------------ttggaggaggagaggctggg--ccTGGACTCCTGAGTCTGAAGGAGGAgggcctgggggctctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtctgaggaaggtggggctgggggcctgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e macFas5.chr19 55882539 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=42736.000000 s hg38.chr19_GL949748v2_alt 1058435 204 + 1064304 actcctgggtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggg-gctggactcctgggtcagagggaagaggggctgggggtctggactcctgagtcagagggaagaggggctggggggctggactcctgggtcagagggaa s papAnu2.chr19 47970869 205 + 51301725 actcctgggtctgaaggaggagggcctggggtcctggactcctgggtctgagggaggaggggctggggtcctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtctgaggaaggtggggctgggggcctggactcctgggtctgaaggaggagggcctgggggcctggactcctgggtctgagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 78927 200 + 138250 actcctgggtctgagggaggaggggctggga--ctagactcctgggtctgagggaagaggggctgtggacctagagtcctgggtctgagggaggaggggctgggg--tctggactcctgggtctgagggaagaggggct-ggggtctggactcctgggtctgagggaggagggactgtggacctagagtcctgggtctgagggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e macFas5.chr19 55882539 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=14907.000000 s hg38.chr19_GL949748v2_alt 1058639 37 + 1064304 gaggggctgggggcctggactcctgggtcagagggaa s macFas5.chr19 55882539 35 + 59248254 gagaggct--gggcctggactcctgggtctgaaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971074 36 + 51301725 gagggact-ggggtctggactcctgagtctaagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79127 36 + 138250 gaggggct-ggggtctggactcctgggtctgagggaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=29122.000000 s hg38.chr19_GL949748v2_alt 1058676 37 + 1064304 gaggggctgggggc-ctggactcctgggtcagagggaa s nomLeu3.chr10 103415030 37 - 106955855 gaggggctgggggc-ctggactcctgggtctgagggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882574 38 + 59248254 gagggcctgggggctctggactcctgggtctgagggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971110 37 + 51301725 gaggggctggggac-ctggactcctgggtctgagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79163 36 + 138250 gaggggctggggt--ctggactcctgggtctgagggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=55374.000000 s hg38.chr19_GL949748v2_alt 1058713 67 + 1064304 gag---gggctgggggtctggactcctgggtcagagggaggaggggctgggggg-ctggactcctgggtca s ponAbe2.chr19 56946642 66 + 60714840 gag---gggctgggg-cctggactcctgggtccgagggaggaggggctgggggc-ctggactcctgggtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415067 45 - 106955855 gag---gggctgggg----------------------gaggaagggctgggggc-ctggactcccgagtca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882612 70 + 59248254 gaggaagagctgaaggtctagactcctgggtctgaggaaggtggggctgggggc-ctggactcctgggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971147 66 + 51301725 gag---gggttgagg--ctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtct i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79199 66 + 138250 gag---gggctggggacctagagtcctgggtctgagggaagaggggctggggt--ctggactcctgggtct i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=19963.000000 s hg38.chr19_GL949748v2_alt 1058780 17 + 1064304 gagggaagaggggctgg- s ponAbe2.chr19 56946708 17 + 60714840 gagggaggaggggctgg- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415112 17 - 106955855 gagggaagaggtgctgg- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882682 17 + 59248254 gaaggaggagggtctgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971213 16 + 51301725 gagggaggggggact-g- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79265 17 + 138250 gagggaggaggggctgg- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152441 18 - 122678785 GAGGGAGGAGGGGGCTGA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=69560.000000 s hg38.chr19_GL949748v2_alt 1058797 32 + 1064304 gggcctggactcctgggtttgagggaggagg---g s ponAbe2.chr19 56946725 35 + 60714840 gggcctggactcctgggtctgagggaggaggaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415129 32 - 106955855 gggtctggactcctgggtcagagggaagagg---g i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882699 32 + 59248254 gggcctggactcctgggtctgaaggaggagg---g i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971229 32 + 51301725 gggtctggactcctgggtctgagggaggagg---g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670627 32 + 50890351 gggcctggactcctgggtctgagggaggagg---g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79282 32 + 138250 gaacctggacttttgggtctgagggaggagg---g i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152459 32 - 122678785 GGGCCTGCACCCCAGGGTCTGAGAGAGGAGG---G i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=117133.000000 s hg38.chr19_GL949748v2_alt 1058829 57 + 1064304 gctgggggc-ctggactcctgggtcagagggaagag---gggctggg---------------gg-gctggactccta s panTro4.chr19 59991487 57 + 63644993 gctgggcgg-ctggacttctgggtcagagggaagag---gggctggg---------------gg-gctggactccta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946760 57 + 60714840 gctggaggt-ctggactcctgggtcagagggaagag---gggctggg---------------gg-gctggactccta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415161 57 - 106955855 gctgggggt-ctggactcctgggtcagagggaagag---gggcgggg---------------gg-gctggactccta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882731 59 + 59248254 cctgggggctctggactcctgggtctgaggaaggtg---gggctggg---------------ggctctggactcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971261 56 + 51301725 gttgagg---ctggactcctgggtctgaggaaggtg---gggctggg---------------ggtTCTGGACTCCtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670659 60 + 50890351 gctgggggc-ctggactcctgggcctgagggaggaggaagagctgaa---------------gg-tctagactcctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79314 57 + 138250 gctgcgtac-ctagagtcctgggtctgagggaggag---gggctggg---------------ag-cctggactcttg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152491 71 - 122678785 -CTGGGGGC-CTGGACTCTTGGGTCTGAGAGGGGAG---GTCCCAGGACAAGGGGGAACCATGG-TCCGGATTCCTA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60724918 0 + 64156825 C a score=7933741.000000 s hg38.chr19_GL949748v2_alt 1058886 2366 + 1064304 ggtttgagggaggaggggctgggg-gcctggactcctggg-tctgatggagga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTAGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGCCAGGGGCCTCGGGTCCACT-TAATCTGCCAGCCTTTCCTCCAGGCCAGCTGTTGTGCTGGACAGTGGGACCACGGAGGCAAATCAAGACACAGCCCTGCATGAGGAAGGGGTAGACAAGGTCCAGAGGAATCCACAGAGGCGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCATGGCAGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCATGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCGGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacagggctgttatccctaaccccctaaccgcctgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCaga-------tgggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcctggggctAAGGCGGGATCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACATGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGG-------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTTCGGGGCGTGGACGTGCGTGGG-TTCACAGGTGTGAACGGTAGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCCCCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCGTATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTCACTCCCTTTGAGCCTTTTGAGCCT--GTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGTCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC s panTro4.chr19 59991544 2391 + 63644993 ggtctgagggaggaggggctgggg-gcctggactcctggg-tctgatggagga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCATTGCCTCACCTCAGTCACGGATATGAAGTCAGGGGCCTCGGGTGCACT-AAATCTGCCAGCCTTTCCTCCGGGCCAGCTGTTGTGCTGGACAGTGGGACCACGGAGACAAATCAAGACACAGCCCTGCATGAGGAAGGGGTAGACAAGGTCCAGAGGAATCCACAGAGGCGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggggtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCATGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacagggctgttatccctaaccccctaaccgcctgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGA-------Tgggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcctggggctaaggcgggATCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACATGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGGTCTGGGGGAGCAGCCAGGACGAGG-------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTTCGGGGCATGGACGTGCGTGGG-TTCACAGGCGTGAACGGTAGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAACGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGCAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCCCCTCCTCGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATCCCTCCCTATATCGGATTTCTCCCTACCTCCCTATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTCATTCCCTTTGAGCCTTTTGAGCCT--GTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946817 2347 + 60714840 tgtctgagggagaaggggctgggg-gcctggactcctgagttctgatggaggagggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTCGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGGCCTCGGGTCCTCTCAAATCTGCCAGCCTTTCCTCCCGGCCAGCTGTTGTGCTGGACAGTGGGACCATGGAGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACACACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgccggcaaggagcctccagta-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacagagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCCGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCGTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctggga-------------accccagcctccttcttgagccttaatagccttacctattaaacaggggtgttatccctaaccccctaaccgcatgaggttgcc---------ctgaCCTGCTGGCTCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCCGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCAGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGA-------CAggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggacatgggtggggcctctagg---tggggcggggcctgggactaaggcgggATCAGAGCAAGGAAGGGCAGGGAACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGACAGAACGTGAAGGTGGGA-----------------------------TGAGGACATGGACAGAACATGGCCAAGAAGGGTCTCGGGGAGCAGCCAGGACGAGGA------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGGGCGTGGACGTGCGTGGG-TTCACAGGCGTGAACGGTGGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGC----------GGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCACCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGGGCTGACGCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCCTATAT---CGGATTTTTCCCTACCTCGTCGAACTTGTTCACTCCCTTTGAGCCTTTTGCGCCT--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415218 2339 - 106955855 ggtctgagggaggaggggctgggg-gcctggactcctggg-tctgatggaaga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTG-----CCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCATCTCAGTCATGGATATGAAGTCAGGGGCCTCGGGTCCACTCAAATCTGCCAGCCTTTCCTCCCGGCCAGCTGTGGTGCTGGACAGTGGGACCACGGAGACAAATCAAGACAGAGCCCTGCATGAGGAGAGGGTAGACAAGGTCCAGAGGAACCCAAGGAGGCGCCTGGTGCTCTAATGGAGGTGGTAGGGGGCACAGCAGGAGACCCCAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccacaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatggaagggaaacaaagggcactggg---------agg-ggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCCGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTG-TTTCTCCGTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGATGATGGCGTGCACACTGTGGAAGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACATGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgcgaatcttggctactgcacgtccttcctctgggaactctggcgagggaccccggcccccttcttgagccttaatagcctcatctattaaacaggggtgttatcgctaaccccctaaccgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCTCACCCCGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGTTGCTCGTGTGCCAGGAACCCGAGCGCGCCCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGAA-------CGGGCTGGCTCTGGGGGTGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGAGGCGGGGCCTGGGGCTAAGGCGGGACCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCGGCGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACACGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGGTCTGGGGGAGCAGCCAGGACGAGGA------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGGGCGTGG-------------------------ACGGTGGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGTGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATTCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGTTAGCCGGTTTCCCCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGACTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TCCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCCTATAT---CGGATTTCTTCCTACCTCGTTGAATTTGTTTACTCTCTTTGAGCCTTTTGAGCCTCAGTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724918 2367 + 64156825 ggtctgaaggaggagggcctgggggctctggactcctggg-tctgagggagga-ggggctgagg-gcctggactcccaggCTCATTTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCAAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCTGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCATGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAggagagagctgtaatccagactccttccctgcctgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGggggcacgtgggtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtctttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacaggggtgttatccctaactccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCATACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCGGACGGCGTTCgggttggctctgggggcggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcatagggctaaggcgggATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAACCAGGACGAGGA------------TGGGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCCGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGTACGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCCGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AAGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGATGACTC----CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i rheMac3.chr19 C 0 M 697 s macFas5.chr19 55882790 2364 + 59248254 ggtctgagggaggaggggttgagg---ctggactcctggg-tctgagggagga-ggggctgagg-gcctggactCCCAGGCTCATTTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCTGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCcagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGggggcacgtgggtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtctttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacaggggtgttatccctaactccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCATACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCAGACGGCGTTCGGGTTGGCTCTGGGGGCGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGGGGCGGGGCATAGGGCTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAACCAGGACGAGGA------------TGGGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCCGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGTACGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCCGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AAGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGATGACTC----CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971317 2349 + 51301725 ggtctgagggaggaggggttgagg---ctggactcctggg-tctgagggagga-ggggctgggg-gcctggactcccaggctcattttctttctcccctgGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGCCAGTTTGCCCATCCGTAAAACGGACCTCCGTTGCCTCACTTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACGAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCCAGACTCCTTCCCTGCCCGCAAGGAGCCTCCAGTC-TG-TGAGAAGCCAGACTCAGGTGCTAGTCACTCTGATGAAAGGGAAACAAAGAGCGCTGGG---------AGGAGGAGCTG-------ATTTGTGGAGCAGGtgatcaaggaaggcttcctggaggaggtgtggTTAGTCTCAGGCTGAAAG--TGATTATTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGGTGGGAGGAGTGTCT--------------GGGGCAGGGA---------CTTCAGGGGGTCTGGGTGTGAATCTTGGCTCCTGCACGTCCTTCCTCTGGGAACTCTGGCGAGGGACCCCAGCCCCCTTCTTGAGCCTTAATAGCCTCATCTATTAAACAGGGGTGTTATCCCTAACCCCCTAACTGCGTGAAGTTGCC---------CTGACCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCGGACGGCGTTCGGGTTGGCTGTgg----------------gggcgga-gcctggagcaggggcggaaatgggtggggcctctagg---tggggcggggcctagggcTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAACGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAGCCAGGACGAGGA------------TGCGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGGCGTGCATGGG-TCCATAGGCGTGAACGATGGCCGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCggtttcccctccctgtgcct-------------------cacTCT-----------------------ACAA-CACCAGACTGGAACAGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTATCTCCCAGACGAGCTGACTCCTT-CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCTCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670719 2368 + 50890351 ggtctgagggaggaggggctgggg--cctggactcctggg-tctgatggagga-ggggctggggagcctggactCCCAGGCTCA-TTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGACAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGCCAGTTTGCCCATCCGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATTGATATGAAGTCAGGGGCCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCACGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCcagactcctcccctgcccgcaaggagcctccagtc-tg-tgagaaaccagactcaggtgctagtcactctgatgaaaggaaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggagcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacacgggtgttatccctaaccccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGTCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGACGGCGTTCGGGTTGGCTCTGGGGGCGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGGGGCGGGGCCTAGGGCTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGAACATGAGGGTTGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTAGGGGAGCAGCTAGGACGAGGA------------TGCGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGGCCGCAAGTGGGCTGGGACGGAGCAGAGAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGAGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-TACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTATCTCCCAGACGAGCTGACTCCTT-CCCAGAATTCTTACTTCTT--------TTCCCTGTTCCCCGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGTCT-------CA--GTGTGTCTCGTTCTACGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79371 2328 + 138250 gttctgagggaggagAggctgggg-----------ttggg-gct---ggggct-ggggctgg---ggctggACTCCCAGGCTCATTCTCCTTCTCCCCCCGCAGAGCAGAGGAAGCGTTACTCCACGGTTGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTTCCCCAGGTCATCTCT--GG-GCAAAGGT-----GCCCTCAGGAGATAGGGCTTATTAAAGCAGTTGGGCCCCCAAGCAGAAAGCATGT-GGAAAGTCAGTTTGCTCATCCACAAAATGGACCTCCATTGCCTCGCCTCAATTATAGATATGAAGTCAGGGACCCCGGGTCCACTCAAATCTGCCAGCCTTTCCTCT--GCCAGCTGTTGTGCTGGACAGTGGGACCATGG-GACAAATC-AGACACGGCCCTGCATGAGGAGGGGGTAGACAAGGTGCAGAGGAACCCACGGAGGCGCCTGGTGCTCTAATGGAGGAGGCAGG-----------------------------TAGAAGGAGCGAGCTATAATCCAGACTCCTTCCCT-----------GCCTCCAGTC-TG-GAAGAAGCCAGACCCAGGTGCTAGTCATGCTGATGAAAGGGAAGCAAAGGGCACTGGG---------AGGAGGAGCTG-------ATTTGTGGAGCAGGTGATCAAGGAAGGCTGCCT---AGAGGTGTGGTTAATTTCGGGCTGGAAGTCTGATTATTCCGGGGGAATTCTGAGCCCACCTGGCATAATCTTGGGCCTCACTGCTTTCTCCGTGGT-CCATACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGAAGATGGTGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGTCTGTCATGGACAGCCAGGGCCGAGTCTGGGCACAAGAGATGCTGCTGCGTGTATCCCCCGACCACGTCACGCTGCTTGACCCGGCCTCCAAGGTGCCagggggtatgagcgtgggaagagtgtct--------------agggcaggga---------cttcggtggatttgggtgtgaatcttggctcctgcacgtccttcctctaggaacaatggcgagggagcccagccccattcttgagtcttaatagcctcatctattgaacaggggtgttatctctcaccccctaaccgcgcgaggtGGCC---------CTGCCCTGCTGGCCCACACTGCCCTCACC-TTTAGTCCTATCACCAGTTCGAGGCCTCAGCTTACCCC-CCATCCCACCCGCCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGCTGCGACGCGGTGTTGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAGCCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTGGGGGTGAGCGCACCGGGTTCGGGCTGGCTC--GGGGTGGAGCTGAAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGTTTCCAGG---AGGGGCGGGGCCTGGGGCAAAGGCGGGGTCAGAGCAAGGAAGGGCAAGGGGCCTGGGAAG------------GGGAGTGAG-------GAGGCTGGACGTAG---AGTCAAGATAAAACATGAGGCTGGGACGTAGTGGAGGCTAAGGGCTGGAGTAGTCTGAGGACATCAACAGAACATGGACAAGAAGGGTCTGGAGGAGCAGCCAGAACGATGA------------TG-GGGCAAGGAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGAGAGGG-GTGAGTCCAGGGCGTGGACGTGCGTGGG-TCCACAGGCAGGAACGATGGCCGCTCGTGGACTAGGAGCGAGCGGAAAACTCGGCCAGGGGCGTGGCTCGGGGTGGGAAGTGGGTGGGGCGTGGGGAGGCGTGGCCTGACGGCGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGAGAGCGCAGGGCGGCGGCGCTGAGGTGAG-----------------AGGGAAGAAG------TTGGTGGGACCTCTAGGAAGCCGGTTTCCCCTCCCTGGGCCTGTCTCATCTGAGAAGTGGGCAGACA-----------------------CCAACCACCAGCCTGGAACAGAACC--AGTGTTGAATGGAGTCAAGCACGCCCTCG-TCGAG---CGTTTGTAGCTCCCAGACGAGGTGGATCCTCTTCCAGGACGC-TCCTTCTT--------TTCCCTGTTCCCTGTCT--AGGCCCTGGGTTTCACTTTGGAGA--TGCTACT-------------------------CCTCCCTA-GT---GGGATTTCTCCCCAACTCTTTGAACCTGTTTGCTCCCTTTGTGCCT-------CA--GTGTGTCTCGTTCTGGGCCCCGAATTTCCCCCTCCCTGGATCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152562 2392 - 122678785 AGTCTGAGGGAGGAGGGGCTGGGG---TCTGACTCCTGGG-TCTGAGGCAGTA-GGGGCTGA---GTCT------TCTGGATTATTCTCCTTCTCCCCC-ACAGAGCAGAGGAAACGTTATTCCACTGTGGTTATGGCAGATGTTTCGCAGTATCTAGTCAATGTGAGT-TGGGGTCTGCGTGGCCACAGGGAGTCTTGTGGGAGGAAAGGCAGGCAGGCCTGGGAAGATGGAAGTGTTGAAAGCAGTTGGGTCTCCAAGCAGAAAGAAGCTAGGAAACTGAGTTTGGTCATATGCAAGATGGGTTTC---TGCCTTTGCTCAGAAGTGGGTATTGAGTAGAAG---TCAACTCCACTTGAAT---CCAAGTTTTCCTCCAGACCAGCTCTTGTGCTGGACAGTCAGGCCATGGGGACAA--TGTTACATATCCTCGTACGAGTACAGGTCAAA----------------------GGgtgccaggtgctctaatggaggcag--------------------------aggtgcttagaagggactagatataaccaa-----------tgccttcaaggagcctccagtcgtgctgggaggacaggtcccagtgctagtcactccgatgaaagcaaaacaaaggaaactcaggggccccataggtggagcaggtgccccataagtggagcaggtgat-aaggaaggctttcccaaggaggtgtgtttagtctcgggctggaaggctg---aTGCCAGGGG-ATGCTGAGCCCAGCTGACATTAATCTGGGACTCACTGCTTTCTCGGCACCGCCGTGCCAGCACCTGGTGACATTCTGCCTGGGTGAAGAGGATGGCGTGCACACTGTGGAGGATGCCTCCCGGAAGCTGGCCGTCATGGACAATCAGGGCCGCGTCTGGGCCCAAGAGATGCTGCTGCGCGTGTCTCCGGACCACGTCACGCTGCTTGACCCCATCTCCAAGGTGCCAGGGGACACGTGGGTGGAAAGCGCAGTTGGCCTGAGCGAGCAGGGGCATGGAGAGCTTGACCCtccggacgtctaagtgtgaatattggcctctgcatgtccttcctttgggaactttggcaagagatctccacccccattttgagtattattagtctcccctattaaacaggggtgttatccttaaccccctaacctcgcagggttgcctgtgCAGTGCCAGCGTACAAGCTGTCACTGCTGTCACCATTT--TAGTACCACTGGTTCCAGGCCTCAGTTTACCC-GCCATCCCACCCTGCAGGAGGAGTTGGAGTCGTACCCGCTGGGGGCCATCGTGCGCTGCGACGTGGTGATGCTGCCAGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAGCCTGAGCGCACGCAGCCGGATGTGCACTTCTTCCAGGGCTTGCGTCTGGGGGTGAGCGGGCCTGGTCAGGGGAGCCACCGGGGACAGGGCTGAGACCCTGTGGGTTCCCGGAGCGAAGCTAGAGCTAGGCGGGGCCTCTGGGGATGGGGGCGGGGCCTGGGGCAGAGGCGGG-TCTGGTCACCGGAGGAGGCGGGGCCTGGAGAG-AAGTTCGGGAAGGGAAAGGGGTTTT--GAGGTCAGGACTGACCTGGTGGAGGGCGAGACTAAGGTCCCGG-----------------------------GCGGGACGT-AACAGCACATGGGGCAG-AGGGTCT--GGGAGCAGCCACAACCAGAGGCGAGTATGGTCTAGGGGCAAGGCCACATCAGGACCCGGCCTC--TGGGCATGGTCGAGGCCCAGGGCAGGGGCAGAAGTAGGGTGAGGGTGTGAGTTCAGAGAGTGGCGGTGCATGGGCACCGTGAGCCTGAGCGCTGGCTGGAGGGGTTCTGGCGCCCAGCCCAGAAATCGATCCTTGGGGGGACCG-TGGCCAGAGGTAGGTGGGGAGTGGG--GGCCTGGCCTGATGGCATGATTGGCAGGCGGAGCTGATCCGAGAAGACGTCCAGGGGGCTCTGCACGACTACCGGTCTGGCCGCGGGGAGCGCAGGCCCGCAGCGCTCAGGTAAGGGCGCTGGGCTGGAAGCAGGGGAGAAGAGAGGCTGGGTGGGGTGTCTGGGAGGCCAGCCTCCCCTCTCTGGGCCT-------------------CCGTCCCCTCTCCTTCGGACAGTGAGCTGATGC-CCCTACCCTAGAACAGCACA--AGTTTTGAAGCCCGCCAA--ACAGCCTGGTTCGAGTCCTG-CCGTACC-CCCAGACATCTGCACCCGATCTCCAAGACCA-CTTTTCCTAATTCTGGTCCTCGGTTTCTCCTCCTTCGGGCCTCAGTTTCCCTCTGGAGAGGTGTTCCC-------------------------CTTCCCCATATCTCCGGTTTTTTCCTCCCCTGG--------GTCTGATTCCGCTGGGCCG-------CA--GTGTCTC-CGTTTTAAGACCGACTTTATCCCCTGCCCTGTCCCCC--GTGGACTCAAGCT--GTCTCCCTTTGTCCCACCACAGGGCCACGCAAGAGGAGTTGCAGCGCCACCCCTCACC i canFam3.chr1 C 0 C 0 a score=1867958.000000 s hg38.chr19_GL949748v2_alt 1061252 714 + 1064304 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCTAAGGAAGGGGTCTGggggcagggccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggCGTTC--------TCTGGTCAGACTTCTGCGTTATGGAAGAGGGGCT-GGGTCGGGGGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGAAGTGTATAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCTAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGAGCCGGCGCCGGGCGGCTGGGGGTAAGGGGCACCCTGGCGTGGGATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC s panTro4.chr19 59993935 718 + 63644993 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgagaagtggtgagccgcgaaggaaggggtctgggggcgggaccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggCGTTCTCTG----TCTGGTCAGACTTGTGCGTTATAGAAGAGGGGCT-GGGTCGGGGGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGAAGTGTATAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CTTCCCCCTC-----------------------------------CTCTGTCCCCTAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACAGGGAACGCGGCCGCAGGACCCGGCGCCGGGCGGCTGGGGGTAAGGGGCATCCTCGCGTGGCATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56949164 722 + 60714840 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTGGGCCTCCCCAGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgggaagtggtgagccgcgaaggaacgggtctgggggcggggccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggAGTTCTCTGTCAATCTGGTCAGACTTCTGCCTTATGGAGGAGGGGCT-GGGTCGGGGGCGTGGCTTGG--TTGTGGGGCGTGGCCATGTGTTTGGGGCGTGGCCTGATCTGGGGACGTGTGTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTTCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTAGAGCACCGGGAACGCGGCCGCAGGACACGGCGCCGGGCGGCTGGGGGTAAGGGGCACCCTCGCGTGGGATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103417557 723 - 106955855 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCATCAGTCCGCGCAGTGATCAGCATCTTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGACGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACTCTGACTCGGCCTCCCCGGAACTGGGTCCCCGGGGTCCCGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCGAGGGAAGGGGTCTGggggcggggccaggcgactgaaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggAGTTCTCTGTCAATCTGGTCAGACTTCTGCGTTATGGAGGAGGGGCTGGGGTCGGGAGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGACGTGTGTAGGTGCTCAGGTTCAGGACTTTGACGGGGAT--GGTTCTGGAACTCGGGACCCCTGAG-------------------------------------------------CGTCCGCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCAAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGAACCCGGCGCCGGGCGGCTGGGGGTAAGGAGCACCCCTGCGTGGTATCTGAA-CCCCTTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGGTCTCCCCTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55885154 714 + 59248254 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCAGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGACGCAGAGGCCTGGGCCCGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGCTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCGCGGGAAAggggctgggggcggggccagacgactggaggcggggctag-ggcgtgg--------------ggGGCGGGGCCAGCTGCGGGATAGGAGTTCTCCGTCAATCTGGTCAGACTTCGGCGTTATGGAGGCGGGGAA-------GGGGCGGGGCTTGG--TTGTAGGGCGTGGCCAGGTGTTTGGGGCGGGGCCTG-TCTGGAGACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAACCCCCCTCCCGATCACTTCCAGATGCCCCCCCTCTCCCCAGGGTCTCCCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47973666 715 + 51301725 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCAGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGGGCCTGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCgcgcgggaaaggggctgggggcggggccagatggctggaggcggggctgg-ggcgtgga-------------agggcggggtcagctgcgggATGGGAGTTCTCCGTCAATCTGGTCAGACTTCGGTGTTATGGAggaggggcg-------ggggcggggcttgg--ttgtagggcgtggccaggtgtgtggggcggggcctg-tctggggACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CTTCCccctc-----------------------------------ctctgtcccccaggaCATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCATCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAAcccccctcccgatcacttccagatgccccccctctccccagggtctcccctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47673087 714 + 50890351 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCGGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGGGCCGGCGGGGACCTCGAACAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgggaagtggtgagccgcgcggggaaggggctgggggcggggccagacgactggaggcggggctag-ggcgtgga-------------agggcggggcCAGCTGCGGGATGGGAGTTCTCCGTCAATCTGGCCAGATTTCTGCGTTATGGAGGCGGGGCG-------GGGGCGGGGCTTGG--TTGTAGGGCGTGGCCAGGTGTTTGGGGCGGGTCCTG-TCTGGGGACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGACGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAACCCCCCTCCCGATCACTTCCAGATG-CCCCCGTCTCCCCAGGGTCTCCCCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 81699 709 + 138250 CGCCGCGGAGACCCCGCCCCTGCAGCGCCGCCCGTCTGTTCGCGCAGTGATCAACCCCGTGGAGCGGGGCACGGACCGCGGGCGTCTCCAGGCGGAGCCCATTCCCGAGGTGGAGGAGGCGCAGAGGCCTGGCCCTGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCAGACCTGGCGGGTCTACAGGCGGAGCGGGAAGTGGTGAGCATCGTGGAATGGGATCTGGGGGCGGGGCAAGACGGCTGGAGGCGGGGCTAG-GACGTGGA-------------AGGGCGGGGCCGGCTGCGGGACTTGAGTTCTCTGTCAATCGGATCAGACTTCTGCGTTATGGAGGAGGGGCT-GTGGTAGGGGCGTGGCTTGG--CTGTAGGGCGTGGCCAGCTGTTTGGGGCGTGGTCTG------------GTCTAGGTGCGCAGGTTCAGGGCTTCGATGGAAAT--GGTTGTGGAACTCAGAAGCCC-AAG-------------------------------------------------CGTCCCCCTT-----------------------------------CTCTGTCTCCCAGGACATACTGAATCACGTCTTTGACGACGTGGAGAACTTTGTACAGAAGCTGCAGAAATCAGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGGGAGGCTGGGGGTAAGGGACGCCCCCGCCTGAGATCTGAA-CCCCCTCGCGATAACTTCCAAATGTCCCCCATCTCCCCAGCGTCTCCCCTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20154954 763 - 122678785 GGCGGCCGAGACCCCTCCGCTGCAGCGCAGCCCTTCGGTCCGCGCCGTCATCAGCATAGGGGAG------GCGGGCCGGGGGCGACCTCGGGCGGGGCCCATCCCCGAGGTGGAGGAGCCCCAGAGACCCGGGCAGGAAGGAACCTCAGGGAACGCCAACCCAGCCTCCCCGGACCTGGGCCCCCGGGGGCCGGACCTGGCCAGTCTGCAGGCGGAGCGGGACGTGGTGA-------------------GGGGGCGGGGCCAAG-GCATGGAGGCGGGGCCGGCGGTGGGGAGTCCCAGCTTCAGGGGGTGGGGCCTGATGGGGTGTGGGAGT--------------GTCAGACTTC-------TGGGGGTGTGGCT---------GGCGGTGACTGGAATATGAGGACCCGGCCCGCAGCAGAGGGAACGGCCTGGCCTGGGAGGATATCAGGGCCCTT-GGCTGCGGGTTTTGGGGGTGATGCGGGGCCAGGACTCCACATCCCTGAGTCCCCCTGCTCTGACCCGTGCTCTGTCCTCCGGTTCTGTCCTCCGGCTCCgtcccccacactgtcccccacactgtcccccacgctgtcccTCGCCCTGACCCCCAGGACATCCTGAACCACGTGTTCGACGATGTGGAGAGTTTCGTCTCGAAGCTGCAGAAGTCAGCAGAGGCAGCCCGGGTGCTGGAGCACCGGGAGCGTGGCCGCAGGACCCGGCGCCGGGCAGCTGGGGGTGAGAGGCTCCCCAG-GGGGATCCTGAA-----CATCCAGTCCCTCCCAAATATCCTCGCTCTCCCTAGGGTCCCCCCACA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60727285 697 + 64156825 M a score=7526905.000000 s hg38.chr19_GL949748v2_alt 1061966 2329 + 1064304 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCAC----CTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCTCCCCTCAGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGC---CCGCCCCTGGGCC-GGGGCGCGGGCACGACGAACCTGTCCcgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGGCGGCACAGCCTG-CCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTGGGAGGCAGGG-GGCATGGTGATTGGAGGAGCATAA-GGCG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGAGTAGGGAGGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCGGATTGAAAGAAAAGg-ggggcttaaaggaatagaggggctaggggctacggggcaggggcggggctacgcgaaggggcggggctTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGCGGGCTGGCAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTACGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAAtttttttcc--------agagagagagatggatg--------------gggtctcaatattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccggtcTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGAATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGCAGGAACGAAGTTGGGGG------CTGTATCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGTCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TGTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCAAGGAGGGG-TGCGTCCCGGGGGCTCCCGATGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-ggggcgggccggggctgggagagagggaggagcagggtggga-gggggcgggACCCAGACTTctggggctaagggagttgggaatggagacccggattcctgggcctaagggaggaagggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTGAGGGTTAAAAGGATAAGA s panTro4.chr19 59994653 2322 + 63644993 -CGCCACTTGCCAGGGCTGACCTCACCACCAT-----CTTAACCGGGTGTCCAC----CTCTCTCTGCCTGTCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCTCCCCTCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAACTTGCCCCGTCCCC---GCACCCACGCCAACCACCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGACCCTCGGGC-CCCCTTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGGCGGCACAGCCTG-CCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTTAGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGTTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTGGGAGGCAGGG-GGCATGGTGATTGGAGGAGCATAA-GGCG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGGGGAGGGACGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACTAGACCAATCGGATTGAAAGAAAAGG-GGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGCGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAATTTTTTTCC--------AGAGAGagagatggatt--------------gggtctcaatattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccacggtgcccggtcTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTAGTGAAATTAATGACAGAACGAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCTGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCGTCCCGGGGGCTCCCGATGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTTTTCTCAGGTGGGTGAGATGGTGAT-GGGGCGGGCCGGGGCTGGGAGAGAGGGAGGAGCagggaggga-gggggtgggacccagacttctggggccaagggaggagggaatggagacccggattcccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGATCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTTGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56949886 2325 + 60714840 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCGTCGCCGCGCC--CGTCTGCACCCCTCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCTTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCAAGGGCC-GGGGCGCGGGCACGGCGAACCAGCCCCGTCCCC---GCACCCACGCCAACCACATCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTCTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGACTCG-TGTTCGACTCGTAGAAGGTATGACGGCAC--CCTGCCCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGCGTGCGGCGGCCGCACCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCATGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGACGGGGCTGGGAGGCAGGG-GGCGTGGTGATTGGAGGAGCATAA-GGGG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGGGAAGGGAAGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAAGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCAGATTGAAAGAAATGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAGGTTTGGTCTGTAACTTTGGTGATGGGACAGAGTCTATGCAC-TGGGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAAtttttttcc--------agagagagagatggatg--------------gggtctcagtattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccggtcTAGAAATATAAATTGCTGTT-GAATTGGGCTTAGAGCTACTGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTCGTGAAGTTAATGACAGAACTAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCTCCGGACGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGGGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGTGACACAGCAGGGCCTAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTACGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGAAAG-GGGGTCCAGGAGGGG-TGCGTCCTGGGGGCTCCCGGTGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTCCCT----TCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-GGGGTGGGCTGGGGCCGGGAGAGAGGGAGGAGCAGGgagggaggggggagggacctagacttctggggccaagggaggagggaatggagacccgggttcccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAAAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCTAGGGCCTGGGAAGCACTATGTCTGGCTGGGCTCCCTATGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGGATTGGATCTTTGGGTTTTGAAGAAGAGCCCAAATC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGTGCAAGTTTCTGGGAAAGTTAGGAAGTAATAGTATCTCTGGGCCCTCAAGAGGGGTAAAGGCTGGACGATTAAAGTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACA-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103418280 2326 - 106955855 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCACCTCTCTCTCTCTGCCTGCCTGGTGCGGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGACCCCCTCAGAGGGCCTGCTGACGCTGCGAGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-AGGGCGCGGGCACGGCGAACCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGTAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGACGGCACAGCCTGCCCCCTCCTGCTCCCCTGACAGATTGTGAACACGTTGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTAGGAGCCAGGG-GGCGTGGTGATTGGAGGAGCATAAGGGGG---------------------------------------CTGGGAGGTGGGTAGCATGATGATTGGAAAATAGGACTAGGAGGGTAGGGACGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCAGATTGAAAGAAAAGGTAGGGTTTAAAGGAATAG-------aggggctacggggcaggggcagggctacgcaaaggggcggggcTTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATGTGG---AATC--AGGTGAGATTTAGAGACTGGATAAGGCAAtttttttcc--------agagagaaaggtggatg--------------gcgtctcaatatgttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgcgcccggcGTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAACTAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTACCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGGGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCAAGCCTGGGAA-------------------------------------------------GTCC-----GGGGGCG-GGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGTAGGGG-TGCGTCCCGGGGGCTCCCGGTGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggacccagacttctggggccaagggaggagggaatggagatcggggttcccgggcctaggggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCCGGGGCCTGGGAAGCACCGTGC----CTGGGCTCCCTGTGAGGACAGAGCCCTGGATATTGGAGGGGGGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAATAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAATTTCTGGGAAAGTTAGGAAGTGGTAGTA--CCTGGGTCCCCGAGAGGGGTCAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTGTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60727982 2367 + 64156825 -CGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGCCCCGTCCCC---GCACCCACGCCAACCATCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA--GGG---------------------------------------CTGGGAGATGAGTGGC---ATGATTGGAAAATGAGACTAGGAGGAAAGGGACAGGTTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGAGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGCGATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAATTTTTTTTC---CAGAGAGAGAGAGAGATGGATGGGCGTGGG--GGGCgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggccTAGAAATATAAATTACTGTT-GGGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGAGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCTGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAACTCCCCC-AGCCACACGGC----------------ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------GGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagaccggggtttccgggcctacgggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACGCTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i rheMac3.chr19 M 697 C 0 s macFas5.chr19 55885868 2368 + 59248254 -CGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA--GGG---------------------------------------CTGGGAGATGAGTGGCATGATGATTGGAAAATGAGACTAGGAGGAAAGGGACAGGTTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGAGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGCAATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAATTTTTTTTC---CAGAGAGAGAGAGAGATGGATGGGCGTGGG--GGGCgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggccTAGAAATATAAATTACTGTT-GGGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGAGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCTGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAGCTCCCCCAAGCGACACGGCAGGGCCGAGGCTGGGAA-------------------------------------------------CTCCGGGGTGGGGGCGTGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagaccggggtttccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACGCTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47974381 2365 + 51301725 -cGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGtccac--ctctctctctgcctgcctggTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACACTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGCCCCGTCCCC---GCACCCACGACAACCACCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACTGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCgggggggCCCGAGTTAGCGAGCGGCGTGCGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA-GGGG---------------------------------------CTGGGAGATGAGTGGCATGATGATTGGAAAATGAGACtaggaggaaagggaaaggtTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AggggctacggggcaggggcggggttacgcgaaggggcggggcTTCTGGAAAGTTTGGTCTATAACTTTGGCGATGGGAC--AGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAGCCGAGCTTAAGGA---AAACCTGATTTGG---ACTCAGAGGTGAAATTTAGAGGCTAGATAAggcaattttttttc---c--agagagagagagatggatgggCGTGGG--GGgcgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggcctagaaatataaattactgTT-GAGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCtcttggccctggccctggctgcAGGCTGGAGCTGCCCCCGGAAGAGGGCCCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCACAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAGCTGCCCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCCGGGGTGGGGGCGTGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCcccctttttttctgtgtttttccttctgtcttcctgGCTCTTTTCAGGTGGGTGAGATGGTGAa-ggggcgggccggggccgggagagagggaggagcagggaggga-gggggtgggatccagacttctggggccaagggaggagggaatggagACCGGGGTTTCCGGGCCTAAGGGAGGAAAGGGGCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTggaggggagaggctggggaATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCATAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACACTCAAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47673801 2373 + 50890351 -CGCCACGTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTACCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-TCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGACGCGGGCACGGCGAACCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGGAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCCGGC-CCCCGTGCAGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTTCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCAGGACTGGGAGGCGGGG-GGCGTGATGATTGGAGGAGCGTAA-GGGG---------------------------------------CTGGGAGATGGGTGGCCTGATGATTGGAAAATGAGACTAGGAGGGAAGGGACAGGTTAGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGAAATTAATATGAAGGAAA-ATTTAAGACCAGCAGACCAATCAGATTGAAAGAGAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGAGATGGGACAGAGTCTGTGCAC-TTGGGCCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAAGTTTTTTCCAGACAGAGAGAGAAAGAGATGGATGGGCGGGGGGTGGGggggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccgctgcacccggccTAGAAATATAAGTTACTGTT-GAGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGCGGCGGGGCTAG----------ATACAGCGAGCTTTAGGGGAAAACTGAGTTAAGTTAATGACAGAGCTCAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGAGTGCAGCCAGCTCCCCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCCGGGGTGGGGGCGGGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTACCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagacccgggttcccgggcctaagggaggaaaggggctgggagtGGGTAGAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATCGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGATTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCCGGGCCCCCGACAGGGGTAAAGGTTGGGTGATTAAACTCTTGGTTTTCCAGACACTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 82408 2327 + 138250 -CGCCGATTGCCAGGGCTGACCTCACGGCCAT-----CT--AACGGGTGTCCAC--CTCTCTCTCTGCCTGTCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCCGCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CTgcccccgggccgggggcgcggACACCGCGAACCTGGCCGGTCCCC---GCACCCACGCCAACCACGTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCAGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTGTTCGGGCCTCTGCAGATGGTGAG---ACCCGCGCCAGGCCCTCGGGC-TCCCCTGCAGCGGGAGGACTCG-GTTTCGACGTGCAGAAGGTGTGATGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACATCGGGGGGTCCCGAGTTCGCGAGCCGCGTGCGGCGACCGCACCTGACGTCGGAGGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGATCTCGCTGGGGGACTCGTGGACCCGCCCTGGGTGAGGGGCGGGACTGGGAGGCAGGG-GGCGTGGTGATTGGAGGAGCAGAA-GGGGCGGGAGATAGGGGCATGGTGATCCGAGGAGCAGAAGGCACTGGGAGATG-GTGCCATGATGATTGGAAAATGGGACTAGGAGGGAAGGGAAGGGCTAGAGGCGTCGCTTCGTTGAGTAGGGGGGGGGGGTCTTAGGACAAATGTCAAGATTCAATTAGAGGAAAGGCCAGAAATTAACGTGAAGA-------CAAGACCACCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAAGAACAG-------AGGGGCTACGGGGCACGGACGGGGT--------------------------------ATCTGGAACTTTGGCGATGGGACAGAGTCTCTGCGC-TG-AGTCTGGGAGTTTCGTAGGGAAAGGAGCAGAACATGAATCCGAGCTTAAGGA---AAACCTGATTTGT---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCCAttttttttt---t----ccagatagagacg------------------gagtcccgattccttgcccaggctggtctcgaactcctggtctcaagcgatcctcccatcttggctcttggcctcccaaactgctgggactatagacgtgagccaccgctcccgaccTGGCAGCATAAATTGCTGTT-GAGTTGGGCTTAGCGGTACCGGCGGGACTTGGTGAAAAGGGGCTGAGCTAGAATCTTTGGGATGCAGCGAGCTTTAGGGGAAAAC--AGTGAAGTTAATGACAGAGCTAAGCTGGGGGTTAGCTCTGTACCAGGATTCCTGAGCTCTCGGTCCTCTCCCTGGCCGCAGGCTGGAGCTGCCCCCTGAAGAGGGACCTCCGTACAGACCCGAGTTCTACAGCGGCTGGGAGCCGCCGGCCATTGACCCGCAGGGCCGCCCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGCCAGGTGAGGCTGAGGATTCT--------AGGAGAGCAGCAAGCTCCCCCAAACGACCCAGCAGGGCAGAGGCCGGGAA-------------------------------------------------GTCC-----AGGGGCTTGGCTGATCCACCAGGCCTTGCCTCACCCAAC-----TCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCGAGGCAA--GGGGTCCAGGAGGGG-TACGCCCCGGGGGCTCCCGGTGCTGACTCTGCCCCCCTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAC--GGGCGGGCCGGGGC-GGGAGATGGGGAGGAGCagggaggga-gggggcaggacccagatttctggggccaagggaggagggagtggaggcccgggttcccgggcctaagggagaaaaggggctgggagtGGGTAATGTCTGAGA-GTTGGATCCCTGGATCCCC-AAAGGCTGGAAGAAGGCAGTTTGGTTTCCCTGGGCCTGGGAAGCTCCGTCC----CTGGG-TCCCTGTGAGGACAGAGCCCTGGATATTGAAGGACAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAATAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTAGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGAGCTTGGGGGCAAGTTTCT-GGAAAGTTAGGAAGTGGTGGTATCTCTGGGCCCCTGAGAGAGGTAAAGGCTGGACAGTTACACTCTTGG-----------------------TTGTCTGGGTTTCTGCTGGGTGTCAGACT-----------GGG----ACGCGTTAAGGGTT---AGGATACGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20155717 2082 - 122678785 CACCCCCTTGCCAGCTCTGACTCCCCATCCCTGGGGACCTCACTGGG------C----CTCTGTCTGTCTGACTGGCGCTGTCTCTGTGTCCCCAACACTGCACCTGCGTCCCTTACCTGCAGAGGGTCTCCTGACCCTGCGGGCCAAGCCGCCCTCAGAGGCCGAGTACACTGACGTGCTTCAGAAAATCAAGTACGCCTTCAGCCTGCTGGTGAGAATGCGTGGGGTGCGGCCAGCGT-GGGGCGGGGGCGTAGCAAGCCTGACCCGTCTTCCATGCACTCAGTAAGGCCAGCACCTCCCCGGCTCCACAGGCCAGACTGCGTGGAAACATCGCCAACCCTTCCTCCCCAGAGCTGCTGCATTTCCTGTTCGGACCTCTGCAATTGGTGAGCCACCCCTCCCTCAGCCCTCCGGTGGCCCCTGCAGTAGGAGGAATTGAGGTTTGACCT-TGGGGGGCTTGATGGGG-----TGTCCACTCCTGCACCCCTGGCAGATTGTGGACACATCGGGCGGCCCCCGATTTGCAAGTGACGTGCAGCGGCCGCACCTGACGTCTGAGGCGGTGGCACTGCTGCGGGACAACCTCACCCCCCGTGAAAATGCCCTCTGGACCTCGCTGGGGGACTCATGGACCCGCCCGGGGTGAGGGG-----CTGGCAGGCAGGGAAGGGTAGCCACTGG----GCTTAG--------------------------------------------CTAGAGGGTACAACCCCAAGCAATTGAAGAA------------------------------------------------------------GCTAGGGTGACTGCTAGGATGCCACTGGAG---AGACGAGTAGACGGTGTGGAGGAGAGGTT-----------------TCAGACTGGAAAGAAAGGCTGGCCTTAGA-----AA-------AGGGGGTGCAGCCTAGGA-------------------------------AAAGACTGG-CTGTGGATTGGGGAAGGGGGTGGAG---ATACGCTTGCAGGCTGCGAGCCTC-CAGGGATATGAGCAGAGCC--AGACTTAGCAGAAGGAGGCAGGATGGGTGTGGAAAAATC--AGAGGTGATTCAGAGGCTGGACACAGCA--------TT--------AGAGCAAAA---------------------------TCAGTATATT------------------------------------------------------------------------------------------------------TACAAATAT-AGTTGATGTCAGGGTGGAACTTAGAG---------GGGCTTGGCAAAAAGCAGAGAGGCCAG----------AAGCACCTAGCCTAGGGG------CTGGGGAAGTGAAGGTGGTACTGGGGCCTGGGG------CAG-ACTGGCATCCCTGAGCCCTCGGCC----CCTCGGCTGCAGACTGGAGCTGTCCCCCAAGGAGGGACCTCCATACAGCCCTGAGTTCTCCAGCGGCTGGGAGCCCCCTGCCACCGACCCACACGGCCGCGCCTGGGAGGACCCGGTAGAGAAACAGCTACAGCATGAGCGGCAACGCCAGCAGGTGAGGCTAGAGCTTCTCTTCCCCGGGAGGAACAAACTCCTCCCCCAGGTAACACAGTGGGGCTGGGACCAGGAA-------------------------------------------------GTCT--------------------------GGCCCTGCCTGAGCTGCTGCTGCTCTCATCTCCTGCAGCAAAGTGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTCGGGGCCCCA-GGTGGGACAGGTGGGGTCGAGGAGGGGATGCGTCCTGGGGGCTCCTGGCGCTGACTCCACTCCTTTTTTC----TGTCTTTCCTTCTGGCTTCCCGGCTCTTCCCAGGTGGGTGAGGTGGTGACCAGTGAGGGCTgggggctgg-gagaggggggaggggggagggg-ggaggggg-------------------aagggggCAG--------GACCCAGACTTGGGGGTCTGAGGGAGGAA-GGGGCTGGGAGTGGGTAAAGTCTGAGA------------------------GGCTGGGAGAAGGCAGTTTGAGTTCCCATGGCCAGGAAAGCTCCCTGT----GTGGG-TCTTTAAGAGGACAGAGCCCCAGAAGTTAGAGGGAAGAGACTGGGGGCTTGGGCATTTAGGTTTTGAGGTAGAGCTCAAAACCACCTAGGTAACTCTAGGTGGTACTTTGGGGACTTACTGAGTTACCACCTAGGTAACTCTAGGTGGTACTTTGGGGACTTACTGAGCCTTCAAGAGCCAAGGGACAAGTTTCTGGGAAAGTTGGGAAGAGATAGTATTTCTGGGACCCTGAAAGAGGTAACGACTGGG-GGCTGGACCCTTACTATCCCA-AGGCTCTAAAGCAAACTATCTCAATTCCTGCTGAGTGTGATACTGATAGCCTTCAGAGATTAAAGGTTTGGGAAATGATGGCTTGAGA i canFam3.chr1 C 0 N 0 a score=30456.000000 s hg38.chr19_GL949748v2_alt 1064295 9 + 1064304 TTGAAGCTT s panTro4.chr19 59996975 9 + 63644993 TTGAAGCTT i panTro4.chr19 C 0 N 0 s ponAbe2.chr19 56952211 9 + 60714840 TTGAAGCTT i ponAbe2.chr19 C 0 N 0 s nomLeu3.chr10 103420606 9 - 106955855 TTGAAGCTT i nomLeu3.chr10 C 0 N 0 s rheMac3.chr19 60730349 9 + 64156825 TTGAAGCTT i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55888236 9 + 59248254 TTGAAGCTT i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47976746 9 + 51301725 TTGAAGCTT i papAnu2.chr19 C 0 N 0 s chlSab2.chr6 47676174 9 + 50890351 TTGAAGCTT i chlSab2.chr6 C 0 N 0 s calJac3.chr22_GL285922_random 84735 9 + 138250 TTGAAGCTT i calJac3.chr22_GL285922_random C 0 N 0